View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1703-Insertion-1 (Length: 877)

Name: NF1703-Insertion-1
Description: NF1703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1703-Insertion-1
NF1703-Insertion-1
[»] chr5 (33 HSPs)
chr5 (8-633)||(3522450-3523071)
chr5 (649-744)||(20502141-20502236)
chr5 (652-744)||(33247294-33247386)
chr5 (652-744)||(38978796-38978888)
chr5 (652-744)||(29451947-29452038)
chr5 (652-744)||(5355605-5355697)
chr5 (652-744)||(7537075-7537167)
chr5 (652-744)||(32455143-32455233)
chr5 (652-744)||(29002744-29002836)
chr5 (652-744)||(29874319-29874411)
chr5 (660-744)||(9630245-9630329)
chr5 (652-744)||(24173422-24173514)
chr5 (656-744)||(27600812-27600900)
chr5 (664-744)||(35204977-35205057)
chr5 (664-744)||(35212102-35212182)
chr5 (652-702)||(30132884-30132934)
chr5 (512-622)||(26449072-26449190)
chr5 (652-744)||(13932515-13932607)
chr5 (664-744)||(33970671-33970751)
chr5 (645-712)||(8680627-8680694)
chr5 (652-715)||(73786-73849)
chr5 (648-726)||(5002138-5002216)
chr5 (702-744)||(19211334-19211376)
chr5 (654-715)||(13278969-13279030)
chr5 (652-721)||(13789734-13789803)
chr5 (652-724)||(10228141-10228213)
chr5 (652-726)||(29299429-29299504)
chr5 (652-722)||(1015158-1015228)
chr5 (654-744)||(11932024-11932114)
chr5 (652-722)||(22731261-22731331)
chr5 (848-877)||(3521619-3521648)
chr5 (652-689)||(30132844-30132881)
chr5 (652-725)||(33478180-33478253)
[»] chr4 (47 HSPs)
chr4 (649-744)||(54864118-54864213)
chr4 (649-744)||(43141765-43141860)
chr4 (652-744)||(33622882-33622974)
chr4 (652-744)||(25874754-25874846)
chr4 (652-744)||(33615833-33615925)
chr4 (652-744)||(36196367-36196459)
chr4 (652-744)||(37895257-37895349)
chr4 (656-744)||(50511251-50511339)
chr4 (652-744)||(35877368-35877460)
chr4 (652-744)||(52136701-52136793)
chr4 (657-742)||(8347498-8347584)
chr4 (652-744)||(28460800-28460892)
chr4 (652-744)||(32193477-32193569)
chr4 (664-744)||(40592726-40592806)
chr4 (652-744)||(43556693-43556785)
chr4 (658-744)||(35929064-35929149)
chr4 (652-744)||(29686402-29686494)
chr4 (652-744)||(1205136-1205228)
chr4 (652-733)||(38208314-38208395)
chr4 (656-740)||(7086189-7086273)
chr4 (652-744)||(25756714-25756806)
chr4 (652-744)||(56491074-56491166)
chr4 (649-744)||(27587245-27587340)
chr4 (659-744)||(31853121-31853206)
chr4 (653-721)||(1100899-1100967)
chr4 (652-744)||(4418151-4418243)
chr4 (653-732)||(50511391-50511470)
chr4 (660-727)||(54673381-54673448)
chr4 (654-744)||(42160027-42160117)
chr4 (654-735)||(19350616-19350696)
chr4 (652-725)||(30191969-30192042)
chr4 (656-744)||(22019940-22020028)
chr4 (664-744)||(52966409-52966489)
chr4 (654-725)||(48195963-48196034)
chr4 (694-744)||(50511471-50511521)
chr4 (679-740)||(1140923-1140984)
chr4 (652-713)||(29686485-29686546)
chr4 (652-725)||(48361125-48361198)
chr4 (674-744)||(52277989-52278061)
chr4 (652-715)||(24100761-24100824)
chr4 (652-715)||(25756795-25756858)
chr4 (652-722)||(43020831-43020901)
chr4 (652-722)||(47866111-47866181)
chr4 (652-725)||(19150796-19150869)
chr4 (646-727)||(34226383-34226464)
chr4 (652-725)||(36132637-36132710)
chr4 (652-725)||(44111747-44111820)
[»] chr8 (28 HSPs)
chr8 (652-744)||(35583937-35584029)
chr8 (654-744)||(29690490-29690580)
chr8 (652-744)||(13831877-13831969)
chr8 (652-742)||(34604837-34604927)
chr8 (652-744)||(7548499-7548591)
chr8 (652-744)||(45372759-45372851)
chr8 (664-744)||(44579907-44579987)
chr8 (652-744)||(43932051-43932143)
chr8 (659-744)||(43292622-43292707)
chr8 (652-744)||(9420589-9420681)
chr8 (652-744)||(43409836-43409928)
chr8 (654-744)||(40645714-40645804)
chr8 (652-726)||(45180111-45180185)
chr8 (525-628)||(32897626-32897737)
chr8 (655-744)||(34745311-34745400)
chr8 (652-715)||(34745259-34745322)
chr8 (652-715)||(43292570-43292633)
chr8 (652-715)||(43932132-43932195)
chr8 (652-727)||(9550111-9550186)
chr8 (659-742)||(24599725-24599808)
chr8 (658-744)||(9633135-9633221)
chr8 (652-722)||(12958851-12958921)
chr8 (652-722)||(22429610-22429680)
chr8 (666-744)||(38298517-38298595)
chr8 (652-722)||(44796417-44796487)
chr8 (654-715)||(5356876-5356937)
chr8 (658-715)||(9633089-9633146)
chr8 (656-725)||(10839836-10839904)
[»] chr1 (28 HSPs)
chr1 (649-744)||(45977093-45977188)
chr1 (652-744)||(13770763-13770855)
chr1 (651-744)||(15699518-15699611)
chr1 (656-744)||(19998465-19998553)
chr1 (652-744)||(27687843-27687935)
chr1 (656-744)||(44224323-44224411)
chr1 (654-744)||(29438192-29438282)
chr1 (652-744)||(51590484-51590576)
chr1 (652-744)||(52279236-52279328)
chr1 (654-744)||(52030872-52030962)
chr1 (652-744)||(13321768-13321860)
chr1 (660-744)||(31050304-31050388)
chr1 (656-744)||(34174892-34174980)
chr1 (652-744)||(13320305-13320397)
chr1 (652-744)||(48565581-48565673)
chr1 (652-725)||(26924286-26924359)
chr1 (652-740)||(18038746-18038834)
chr1 (652-744)||(22182767-22182859)
chr1 (649-725)||(26760172-26760248)
chr1 (571-631)||(42471273-42471333)
chr1 (649-725)||(44939065-44939141)
chr1 (654-744)||(37178964-37179054)
chr1 (653-725)||(34332549-34332621)
chr1 (654-725)||(49944906-49944977)
chr1 (652-715)||(51590432-51590495)
chr1 (652-725)||(519835-519908)
chr1 (652-725)||(18744629-18744701)
chr1 (652-744)||(29064149-29064243)
[»] chr7 (41 HSPs)
chr7 (652-744)||(41487845-41487937)
chr7 (655-744)||(22618217-22618306)
chr7 (656-744)||(41395668-41395756)
chr7 (664-744)||(45123299-45123379)
chr7 (652-744)||(47280176-47280267)
chr7 (656-744)||(47484027-47484115)
chr7 (649-744)||(7456418-7456513)
chr7 (652-737)||(27320355-27320440)
chr7 (652-740)||(40234768-40234856)
chr7 (649-744)||(10674177-10674272)
chr7 (656-744)||(18064776-18064864)
chr7 (652-744)||(47612344-47612436)
chr7 (659-744)||(37006465-37006550)
chr7 (652-744)||(24164570-24164662)
chr7 (654-744)||(45025648-45025738)
chr7 (652-713)||(24932454-24932515)
chr7 (654-743)||(33901093-33901182)
chr7 (649-744)||(41088906-41089001)
chr7 (654-744)||(29559441-29559531)
chr7 (662-744)||(33039572-33039654)
chr7 (652-725)||(28677319-28677392)
chr7 (652-725)||(36245378-36245451)
chr7 (656-740)||(3633197-3633281)
chr7 (649-713)||(13860302-13860366)
chr7 (660-744)||(39413882-39413966)
chr7 (649-744)||(14543322-14543417)
chr7 (702-744)||(12806962-12807004)
chr7 (649-715)||(24164515-24164581)
chr7 (668-725)||(8566099-8566156)
chr7 (526-567)||(42078150-42078191)
chr7 (667-725)||(2523787-2523845)
chr7 (652-722)||(4826837-4826907)
chr7 (667-725)||(6838448-6838506)
chr7 (652-722)||(28020003-28020073)
chr7 (668-722)||(32811396-32811450)
chr7 (658-744)||(40198658-40198744)
chr7 (656-726)||(41850668-41850738)
chr7 (652-725)||(11668017-11668090)
chr7 (654-744)||(28248485-28248579)
chr7 (664-713)||(40599998-40600047)
chr7 (652-713)||(41088854-41088915)
[»] chr6 (13 HSPs)
chr6 (646-744)||(30438797-30438895)
chr6 (652-744)||(28605572-28605664)
chr6 (653-744)||(10145218-10145309)
chr6 (654-744)||(12217494-12217585)
chr6 (652-744)||(12605612-12605704)
chr6 (652-727)||(2913404-2913479)
chr6 (652-743)||(23916182-23916273)
chr6 (654-744)||(8265026-8265116)
chr6 (652-738)||(17599513-17599601)
chr6 (652-744)||(3064937-3065029)
chr6 (656-744)||(9343174-9343262)
chr6 (661-723)||(24986007-24986069)
chr6 (652-726)||(33119906-33119980)
[»] chr3 (31 HSPs)
chr3 (655-744)||(27302084-27302173)
chr3 (658-744)||(16123810-16123896)
chr3 (654-744)||(43901635-43901725)
chr3 (654-744)||(53284370-53284460)
chr3 (652-744)||(45113736-45113828)
chr3 (662-744)||(50100206-50100288)
chr3 (652-744)||(31376177-31376269)
chr3 (652-740)||(2544516-2544605)
chr3 (647-744)||(39616908-39617005)
chr3 (652-744)||(53703784-53703877)
chr3 (652-744)||(8769188-8769279)
chr3 (652-723)||(42896144-42896215)
chr3 (655-744)||(48643609-48643698)
chr3 (652-725)||(51517030-51517103)
chr3 (652-723)||(21662961-21663032)
chr3 (669-744)||(21944343-21944418)
chr3 (652-715)||(50659951-50660014)
chr3 (652-715)||(53703732-53703795)
chr3 (646-704)||(2544433-2544491)
chr3 (654-744)||(24489317-24489407)
chr3 (652-725)||(12064911-12064984)
chr3 (652-715)||(31376258-31376321)
chr3 (652-715)||(39616994-39617057)
chr3 (649-744)||(44118182-44118277)
chr3 (649-679)||(25294779-25294809)
chr3 (702-744)||(48346502-48346544)
chr3 (652-718)||(53441909-53441975)
chr3 (652-681)||(19227425-19227454)
chr3 (655-724)||(19899687-19899756)
chr3 (658-727)||(25313286-25313355)
chr3 (526-567)||(40417636-40417677)
[»] scaffold0200 (1 HSPs)
scaffold0200 (649-744)||(25613-25708)
[»] chr2 (38 HSPs)
chr2 (652-744)||(36103395-36103487)
chr2 (654-742)||(40534517-40534605)
chr2 (649-744)||(45076396-45076491)
chr2 (676-744)||(23464522-23464590)
chr2 (661-744)||(15239703-15239786)
chr2 (659-744)||(28143752-28143839)
chr2 (654-744)||(3365279-3365369)
chr2 (654-744)||(6971624-6971714)
chr2 (654-744)||(25795242-25795332)
chr2 (664-744)||(27306765-27306843)
chr2 (663-744)||(27311590-27311671)
chr2 (570-626)||(29463290-29463346)
chr2 (652-726)||(12962777-12962851)
chr2 (658-727)||(38448946-38449015)
chr2 (661-744)||(11724324-11724408)
chr2 (693-744)||(41464768-41464819)
chr2 (661-727)||(11687486-11687552)
chr2 (667-725)||(41153128-41153186)
chr2 (652-722)||(45034473-45034543)
chr2 (652-722)||(45571105-45571175)
chr2 (652-722)||(45574772-45574842)
chr2 (652-722)||(45578439-45578509)
chr2 (652-722)||(45582106-45582176)
chr2 (652-722)||(45585773-45585843)
chr2 (652-722)||(45589440-45589510)
chr2 (652-722)||(45593107-45593177)
chr2 (652-722)||(45596774-45596844)
chr2 (652-722)||(45600441-45600511)
chr2 (652-722)||(45604108-45604178)
chr2 (652-722)||(45607775-45607845)
chr2 (652-722)||(45611442-45611512)
chr2 (652-722)||(45615109-45615179)
chr2 (667-744)||(4410794-4410871)
chr2 (660-744)||(9373404-9373488)
chr2 (652-725)||(12486065-12486138)
chr2 (666-727)||(14329209-14329270)
chr2 (652-713)||(25795323-25795384)
chr2 (639-676)||(39063766-39063803)
[»] scaffold0059 (1 HSPs)
scaffold0059 (652-744)||(26588-26680)
[»] scaffold0023 (1 HSPs)
scaffold0023 (652-744)||(112825-112917)
[»] scaffold0110 (1 HSPs)
scaffold0110 (655-744)||(40195-40285)
[»] scaffold0767 (2 HSPs)
scaffold0767 (663-727)||(3880-3944)
scaffold0767 (652-699)||(3811-3858)
[»] scaffold0533 (1 HSPs)
scaffold0533 (661-727)||(3251-3317)
[»] scaffold0287 (1 HSPs)
scaffold0287 (656-740)||(12804-12888)
[»] scaffold0474 (1 HSPs)
scaffold0474 (571-627)||(11330-11386)
[»] scaffold0460 (1 HSPs)
scaffold0460 (661-744)||(12267-12350)
[»] scaffold0377 (1 HSPs)
scaffold0377 (526-567)||(11949-11990)
[»] scaffold0176 (1 HSPs)
scaffold0176 (660-744)||(19348-19433)
[»] scaffold0001 (1 HSPs)
scaffold0001 (652-725)||(156770-156843)


Alignment Details
Target: chr5 (Bit Score: 491; Significance: 0; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 8 - 633
Target Start/End: Complemental strand, 3523071 - 3522450
Alignment:
Q  8 tataagacaagaggtcttcatgtatttttctaaacctttctcttatgtcaactgagaaatacctacttttgacatagtaatctttgcttctttgaatgag 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3523071 tataagacaagaggtcttcatgtatttttctaaacctttctcttatgtcaactgagaaatacctacttttgacatagtagtctttgcttctttgaatgag 3522972  T
Q  108 gttcaaaatactcttctttcnnnnnnntcttggacgaggaaatcttcaaggtagtccatatataattccaaaggaaacaaaagttcaggcccgaatggtt 207  Q
    ||||||||||||||||||||       ||||||| ||||||||| |||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  3522971 gttcaaaatactcttctttcaaaaaaatcttggaggaggaaatcatcaaggtagtccata----attccaaaggaaacaaaagttcaggcccgaatggtt 3522876  T
Q  208 tcaactgtgaattttttaagcctcttttgaggtctcctcaaggtggaaagtgttggtaatgttcgaccaattcaatcaaaatgaatgtcttccaaactat 307  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  3522875 tcaactgtgaattttttaagccttttttgaggtctcctcaaggtggaaagtgttggtaatgttggatcaattcaatcaaaatgaatgtcttccaaactat 3522776  T
Q  308 tcttccttctannnnnnncctctcattccaaaggtccttgcttctcactctcggtcgattaaagaattgattcccaatttgatttaactaaaacacacat 407  Q
    | |||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3522775 ttttccttctatttttttactctcattccaaaggtccttgcttctcactctcggtcgattaaagaattgattcccaatttgatttaactaaaacacacat 3522676  T
Q  408 aattaggatatgaattttctgttcccaatcaatttcaattggcttttgcacacggtggagatggcagtgttgttaattttttcttatcataataagtgtg 507  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  3522675 aattaggatatgaattttctgttcccaatcaatttcaattggctgttgcacacggtggaggtggcagcgttgttaattttttcttatcataataagtgtg 3522576  T
Q  508 tacccaaagacacgatgggataaaataatgttatcatctttcttatcatgcatgcaccaataggataaatgcctatcatgttactatcatatcatatctt 607  Q
    || ||||| ||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||    
T  3522575 tatccaaacacacgataggataaaataatgttatcatcttttttatcatgcgtgcaccaataggataaatgtttatcatgttactatcatattatatctt 3522476  T
Q  608 tatctattttctaattatatcatgtc 633  Q
    ||||||||||||||||||||||||||    
T  3522475 tatctattttctaattatatcatgtc 3522450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 649 - 744
Target Start/End: Complemental strand, 20502236 - 20502141
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  20502236 tattccctccggtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 20502141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 33247294 - 33247386
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  33247294 tccctccggtccttattataagagacaattaacttttttggttcattctataagtgatatatctagtctatatttacaataagatatattaat 33247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 38978888 - 38978796
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| ||||||||||||||||||||||  ||||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  38978888 tccctccgatccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaat 38978796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 29452038 - 29451947
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| ||||||||||||||||||||| | ||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  29452038 tccctccgatccttattataagaaacaatt-gattttttggttcattgtgtaagtgatgtatctagtatatatttacaataagatacattaat 29451947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 5355697 - 5355605
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||| ||  |||||||  |||||||| |||||||||||| | || |||||||||||||||||||||||||    
T  5355697 tccctccggtccttattataagaaacagttgacttttttagttcattgtgtaagtgatgtatttagtttatatttacaataagatacattaat 5355605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 7537167 - 7537075
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||| ||||||||   ||||||| |||||||| |||||||||||||| || ||||||||| |||||||||||||||    
T  7537167 tccctccggtccttattataaaaaacaattgatttttttggttcattgtgtaagtgatgtatctagtatatatttacgataagatacattaat 7537075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 32455143 - 32455233
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||| ||||||||||  |||  |||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||    
T  32455143 tccctccggtccttgttataagaaa--attgacttttttgattcattgtggaagtgatgtatctagtctatatttacaataagatacattaat 32455233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 29002744 - 29002836
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| ||||| |||||||||||||||  |||||||| |||||||| |||||||||||||| |||||||||| | |||||||| ||||||    
T  29002744 tccctccgatccttgttataagaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattttcgataagatatattaat 29002836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 29874319 - 29874411
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||| |||| ||||||||||||||  |||||||| |||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  29874319 tccctccggttcttaatataagaaacaattgacttttttggttcattgtttaagtgatgtatctagtctatatttttaataaaatacattaat 29874411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 660 - 744
Target Start/End: Original strand, 9630245 - 9630329
Alignment:
Q  660 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||||  ||||||| |||||||| |||||||| ||| | |  |||||||||||||||||||||||||    
T  9630245 gtccttattataagaaacaattaatttttttggttcattgtgtaagtgatatatttagattatatttacaataagatacattaat 9630329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 24173422 - 24173514
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| ||||||||||||||||| ||||   ||||||  |||||||| ||||||||||||||  ||||||||| |||||||||||||||||    
T  24173422 tccctccagtccttattataagaaataattgatttttttagttcattgtgtaagtgatgtatctaatctatattttcaataagatacattaat 24173514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 656 - 744
Target Start/End: Complemental strand, 27600900 - 27600812
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| |||||||||||||||| ||||   ||||||| |||||||| |||||||| |||||  |||||||||||||||||||||||||||    
T  27600900 tccgatccttattataagaaataattgatttttttgattcattgtgtaagtgatttatctaatctatatttacaataagatacattaat 27600812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 744
Target Start/End: Complemental strand, 35205057 - 35204977
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||  |||||||  |||||||| |||| ||||||||| | ||||||||||||||||||||||||||    
T  35205057 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaat 35204977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 744
Target Start/End: Original strand, 35212102 - 35212182
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||  |||||||  |||||||| |||| ||||||||| | ||||||||||||||||||||||||||    
T  35212102 ttattataagaaacaattgacttttttagttcattgtgtaagggatgtatctagactatatttacaataagatacattaat 35212182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 652 - 702
Target Start/End: Complemental strand, 30132934 - 30132884
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtat 702  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  30132934 tccctccggtccttattataagaaacaattaacttttttgattcattgtat 30132884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 512 - 622
Target Start/End: Original strand, 26449072 - 26449190
Alignment:
Q  512 caaagacacgatgggataaaataatgttatcatctttcttatcatgcatgcaccaa--------taggataaatgcctatcatgttactatcatatcata 603  Q
    |||| ||| ||| ||||||||||||| ||||||||||||||||||   ||||||||        |||||||| || ||||||||| ||||||||||||||    
T  26449072 caaacacatgataggataaaataatgatatcatctttcttatcatatgtgcaccaaaagcatgataggataagtgtctatcatgtcactatcatatcata 26449171  T
Q  604 tctttatctattttctaat 622  Q
    | |||||| ||||||||||    
T  26449172 tttttatccattttctaat 26449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 13932607 - 13932515
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||||||||| ||||  |||||| | |||| ||| |||||||||||||| |||| |||||| ||  ||||||||||||    
T  13932607 tccctctggtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaat 13932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 664 - 744
Target Start/End: Original strand, 33970671 - 33970751
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||| ||||||| ||| ||||||||| |||||||| | || |||||||  ||||| ||||||||||    
T  33970671 ttattataagaaacaattaacttttttattttattgtataaatgatgtatttagtatatatttttaataaaatacattaat 33970751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 712
Target Start/End: Complemental strand, 8680694 - 8680627
Alignment:
Q  645 gtactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgta 712  Q
    |||||| ||||||||||||||||||||||||||| ||  |||||| | |||||||| |||||||||||    
T  8680694 gtactactccctccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgta 8680627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 715
Target Start/End: Original strand, 73786 - 73849
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||| ||||||||  |||||| | |||||||| ||| ||||||||||    
T  73786 tccctccggtccttattataaaaaacaattgactttttagattcattgtgtaaatgatgtatct 73849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 648 - 726
Target Start/End: Original strand, 5002138 - 5002216
Alignment:
Q  648 ctattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 726  Q
    |||||||||||||||||  |||||||||||| ||  |||||||| || |||| |||| |||||||| || |||||||||    
T  5002138 ctattccctccggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgtatttgatctatattt 5002216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 702 - 744
Target Start/End: Complemental strand, 19211376 - 19211334
Alignment:
Q  702 taagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  19211376 taagtgatgtatctagtctatatttacaacaagatacattaat 19211334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 13279030 - 13278969
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||||||| ||  |||||| | || ||||| ||||||||||||||    
T  13279030 cctccggtccttattataagaaacagttgactttttagatttattgtgtaagtgatgtatct 13278969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 721
Target Start/End: Original strand, 13789734 - 13789803
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtcta 721  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||    
T  13789734 tccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtcta 13789803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 724
Target Start/End: Complemental strand, 10228213 - 10228141
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatat 724  Q
    ||||||||||| |  |||| ||||||| ||  |||||||| |||||||||||| |||||||||| ||||||||    
T  10228213 tccctccggtcttatttattagaaacatttgacttttttgattcattgtataaatgatgtatctcgtctatat 10228141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 726
Target Start/End: Complemental strand, 29299504 - 29299429
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgt-ttcattgtataagtgatgtatctggtctatattt 726  Q
    |||||||||||||  |||||||||||| ||  ||||||||  |||||||||||| ||||||||  |||||||||||    
T  29299504 tccctccggtcctagttataagaaacatttgacttttttgaattcattgtataaatgatgtattcggtctatattt 29299429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Original strand, 1015158 - 1015228
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  1015158 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 1015228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 11932114 - 11932024
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||  ||| |||||||| |||  ||||||| || ||| ||||| |||||||| ||||||||||||   | |||||||||||||    
T  11932114 cctccggtcctatttaaaagaaacatttaatttttttgatttattatataaatgatgtatttggtctatattttagacaagatacattaat 11932024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Original strand, 22731261 - 22731331
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  22731261 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 22731331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 848 - 877
Target Start/End: Complemental strand, 3521648 - 3521619
Alignment:
Q  848 caggccgccgtactgtcgcaactatttaaa 877  Q
    ||||||||||||||||||||||||||||||    
T  3521648 caggccgccgtactgtcgcaactatttaaa 3521619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 689
Target Start/End: Original strand, 30132844 - 30132881
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttt 689  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  30132844 tccctccggtccttattataagaaaaaattaacttttt 30132881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 33478253 - 33478180
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  | |||||| ||||||| |||| |||||||| ||| |||||||    
T  33478253 tccctccggtcctatttataagaaacatttgacatttttgattcattgcataaatgatgtatttggcctatatt 33478180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 2e-39; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 649 - 744
Target Start/End: Complemental strand, 54864213 - 54864118
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54864213 tattccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacattaat 54864118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 649 - 744
Target Start/End: Original strand, 43141765 - 43141860
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  43141765 tattccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaat 43141860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 33622882 - 33622974
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  33622882 tccctccggtccttattataagaaacaattaacttttttggttcattgtataggtgatgtatctagtttatatttacaataagatacattaat 33622974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 25874846 - 25874754
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25874846 tccctccggtccttattataagaaagaattaatttttttggttcattgtataagtgatgtatctagtctatatttacaataaaatacattaat 25874754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 33615925 - 33615833
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||| ||||||||   ||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  33615925 tccctccggtccttattataaaaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 33615833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 36196367 - 36196459
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||| |||||||||||||| | ||||| ||||||||||||||||||||||    
T  36196367 tccctccggtccttattataagaaacaattgatttttttggttcattttataagtgatgtatatagtctacatttacaataagatacattaat 36196459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 37895257 - 37895349
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||| ||   ||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  37895257 tccctccggtccttattataagaaacagttgatttttttggttcattgtataagtgatgtatctagtctacatttacaataaaatacattaat 37895349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 656 - 744
Target Start/End: Original strand, 50511251 - 50511339
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||| | | ||||||||||||||||||||||||||    
T  50511251 tccggtctttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacattaat 50511339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 35877460 - 35877368
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||| ||||||||||||||||||||||  ||||||| |||||||| |||||||||||| | | ||||||||||||||||||||||||||    
T  35877460 tcccaccgatccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatacattaat 35877368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 52136701 - 52136793
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| ||||| |||||| | |||||||| |||||||||||| | ||||||||||| || |||||||||||||    
T  52136701 tccctccggtccttattataagaaaaaattaactttttaggttcattgtgtaagtgatgtatttagtctatatttataacaagatacattaat 52136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 657 - 742
Target Start/End: Original strand, 8347498 - 8347584
Alignment:
Q  657 ccggtccttattataagaaacaatt-agcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 742  Q
    |||||||||||||||||||||| || |  ||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  8347498 ccggtccttattataagaaacatttgattttttttggttcattgtataaatgatgtatctagtctatatttacaataagatacatta 8347584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 28460892 - 28460800
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| | ||||||||||||||||||| ||||||| | |||||| |||||||||||||| | |||||||||||||| |||||| ||||||    
T  28460892 tccctccgattcttattataagaaacaattggctttttagattcattatataagtgatgtatttagtctatatttacaacaagataaattaat 28460800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 32193477 - 32193569
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||| | ||||| |||||||| ||||||||||  |||||| |||||||||    
T  32193477 tccctccggtccttattataagaaacaattgacttttttggttcattatgtaagtaatgtatctagtctatatttctaataaggtacattaat 32193569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 664 - 744
Target Start/End: Original strand, 40592726 - 40592806
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||| || |||||||| || |||||||||||||    
T  40592726 ttattataagaaacaattaactttttggattcattgtataagtgatgtatctagtttatatttataacaagatacattaat 40592806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 43556693 - 43556785
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||   ||||||  ||| |||| ||||||| |||||| ||||| ||||||||||||||||||||||    
T  43556693 tccctccggtccttattataagaaacaattgatttttttagttcgttgtgtaagtgacgtatctagtctacatttacaataagatacattaat 43556785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 658 - 744
Target Start/End: Complemental strand, 35929149 - 35929064
Alignment:
Q  658 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| |||||||||||||||||| | ||||||| |||||||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  35929149 cggtcattattataagaaacaatt-gattttttggttcattgtgtaagtgatgtatctaatctatatttataataagatacattaat 35929064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 29686402 - 29686494
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||| ||  |||||| | |||||||| ||| |||||||||| ||||||||||| || || ||||||||||    
T  29686402 tccctccggtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttataacaatatacattaat 29686494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 1205228 - 1205136
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgt-ttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| || ||||||||||||| |||| | |||||| | |||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  1205228 tccctccgatctttattataagaaaaaatt-gattttttatattcattgtctaagtgatgtatctagtctatatttataataagatacattaat 1205136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 652 - 733
Target Start/End: Complemental strand, 38208395 - 38208314
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataa 733  Q
    ||||||||||||||| ||||||||||||||  | |||||  |||||||| |||||||||||||| |||||||||| ||||||    
T  38208395 tccctccggtccttaatataagaaacaattgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataa 38208314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 656 - 740
Target Start/End: Complemental strand, 7086273 - 7086189
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 740  Q
    ||||||||||||||||||||||| ||  |||||| | |||||||| |||||||||||||||||||| ||||| ||  ||||||||    
T  7086273 tccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctggtctacatttataacgagatacat 7086189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 25756714 - 25756806
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| ||||  |||||| | |||| ||| |||||||||||||| |||| |||||| ||  ||||||||||||    
T  25756714 tccctccggtccttattataagaaataattgactttttaggttcactgtgtaagtgatgtatctagtctctatttataacgagatacattaat 25756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 56491074 - 56491166
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||| | |||||  |||||| | |||||||||||||| |||||||| ||||||||||| ||  || |||||||||    
T  56491074 tccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaat 56491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 649 - 744
Target Start/End: Original strand, 27587245 - 27587340
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||||||||||||||||||||||  |||||| | || ||| ||||| |||||||||| || |||||||| ||  ||||||||||||    
T  27587245 tatttcctccggtccttattataagaaacaattgactttttagatttattatataaatgatgtatctagtgtatatttataacgagatacattaat 27587340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 659 - 744
Target Start/End: Complemental strand, 31853206 - 31853121
Alignment:
Q  659 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||||||| | ||  |||||| | |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  31853206 ggtctttattataagaaaaatttgactttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 31853121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 653 - 721
Target Start/End: Original strand, 1100899 - 1100967
Alignment:
Q  653 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtcta 721  Q
    |||||||||||||||||||||||||| ||  |||||| | |||||||| |||||||||||||| |||||    
T  1100899 ccctccggtccttattataagaaacatttgactttttaggttcattgtttaagtgatgtatctagtcta 1100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 4418243 - 4418151
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| ||||   ||||| | |||||||| |||||||||||| | || |||||||| || || ||||||||||    
T  4418243 tccctccggtccttattataagaaaaaattgattttttaggttcattgtgtaagtgatgtatttagtttatatttataacaaaatacattaat 4418151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 653 - 732
Target Start/End: Original strand, 50511391 - 50511470
Alignment:
Q  653 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaata 732  Q
    |||||||||||||||||||||||||| ||  |||||||  |||||||| |||| ||||| ||| || |||||||||||||    
T  50511391 ccctccggtccttattataagaaacacttgacttttttagttcattgtgtaagggatgtgtctagtttatatttacaata 50511470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 660 - 727
Target Start/End: Complemental strand, 54673448 - 54673381
Alignment:
Q  660 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    ||||||||||||||||||||||  |||||| | |||||| | |||||||||||||| |||||||||||    
T  54673448 gtccttattataagaaacaattgactttttaggttcattatgtaagtgatgtatctagtctatattta 54673381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 42160117 - 42160027
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||| ||||||||||||||| ||  |||||| |  ||||| | |||||||||||| | ||||||||||| || |||||||||||||    
T  42160117 cctccggtctttattataagaaacatttgactttttagaatcattatgtaagtgatgtatttagtctatatttataacaagatacattaat 42160027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 654 - 735
Target Start/End: Original strand, 19350616 - 19350696
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataaga 735  Q
    |||||| || |||||||||||||||||||  ||||||| |||||||| ||||||| |||||| |||| |||||| |||||||    
T  19350616 cctccgatctttattataagaaacaattaatttttttggttcattgtgtaagtga-gtatctagtctttatttataataaga 19350696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 30192042 - 30191969
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    ||||||||||| |  |||||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||    
T  30192042 tccctccggtcgtatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatatt 30191969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 656 - 744
Target Start/End: Original strand, 22019940 - 22020028
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||| |||||||| |||||| | |||||| | |||||||||| |||  |||||||||| ||  |||| |||||||    
T  22019940 tccggtccttattataagtaacaattaactttttagattcattctgtaagtgatgtgtctaatctatatttataacgagatgcattaat 22020028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 744
Target Start/End: Original strand, 52966409 - 52966489
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||| | ||  ||||||   ||||||||||||||||||||||| ||||||||||| || ||||| |||||||    
T  52966409 ttattataagaaaaatttgactttttaagttcattgtataagtgatgtatctagtctatatttataacaagatgcattaat 52966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 654 - 725
Target Start/End: Complemental strand, 48196034 - 48195963
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  48196034 cctccggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatatt 48195963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 694 - 744
Target Start/End: Original strand, 50511471 - 50511521
Alignment:
Q  694 tcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| |||| ||||||||| || |||||||||||||||||||||||||    
T  50511471 tcattgtgtaagggatgtatctagtttatatttacaataagatacattaat 50511521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 740
Target Start/End: Complemental strand, 1140984 - 1140923
Alignment:
Q  679 attagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 740  Q
    |||| |||||| | |||||||| |||||||||||||||||||||||||| || || ||||||    
T  1140984 attaactttttagattcattgtgtaagtgatgtatctggtctatatttataacaaaatacat 1140923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 713
Target Start/End: Complemental strand, 29686546 - 29686485
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 713  Q
    |||||||||||||||||||||||||||||||  |||||   |||||||||||| | ||||||    
T  29686546 tccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtat 29686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 48361198 - 48361125
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    ||||||| |||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  48361198 tccctcctgtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 48361125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 744
Target Start/End: Original strand, 52277989 - 52278061
Alignment:
Q  674 aaacaattagcttttttgtttcattgtataagtgat--gtatctggtctatatttacaataagatacattaat 744  Q
    |||||| || |||||||| |||||| ||||||||||  |||| | ||||||||||||||||||||| ||||||    
T  52277989 aaacaaataacttttttgattcattatataagtgatatgtatttagtctatatttacaataagatatattaat 52278061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 715
Target Start/End: Original strand, 24100761 - 24100824
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    |||||||| |||||||||||||||| ||||| |||||| | ||||||| |||| | ||||||||    
T  24100761 tccctccgatccttattataagaaataattaactttttagattcattgaataattaatgtatct 24100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 715
Target Start/End: Complemental strand, 25756858 - 25756795
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||||||||||||  ||||||   ||||||| |||| | ||||||||    
T  25756858 tccctccggtccttattataagaaacaattgactttttatgttcattggataattaatgtatct 25756795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 43020901 - 43020831
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  43020901 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 43020831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 47866181 - 47866111
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  47866181 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 47866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 19150869 - 19150796
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||| ||||||  |||||||||||| ||  |||||| | ||||||| |||| |||||||| |||||||||||    
T  19150869 tccctctggtcctatttataagaaacattttactttttcgattcattgcataaatgatgtatttggtctatatt 19150796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 727
Target Start/End: Original strand, 34226383 - 34226464
Alignment:
Q  646 tactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    ||||||||||| |||  ||  |||||| ||||||||  |||||||| ||||||| |||| |||||||| |||||||| ||||    
T  34226383 tactattcccttcggatctatttataataaacaatttacttttttgattcattgaataattgatgtatttggtctattttta 34226464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 36132637 - 36132710
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    ||||||| |||||  |||||||||| | ||  |||||||| |||||||||||| |||||||| | |||||||||    
T  36132637 tccctccagtcctatttataagaaatatttgacttttttgattcattgtataaatgatgtatttagtctatatt 36132710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 44111747 - 44111820
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  |||||||| || |||  |||| |||||||| |||||||||||    
T  44111747 tccctccggtcctatttataagaaacatttgacttttttgattaattacataaatgatgtatttggtctatatt 44111820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 3e-35; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 35584029 - 35583937
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  35584029 tccctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatttacaataagatacattaat 35583937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 29690580 - 29690490
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  29690580 cctccggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatttataataagatacattaat 29690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 13831877 - 13831969
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  13831877 tcccttcggtccttattataagaaacaattaacttttttggttcattgtataagtgatgtatatagtctatatttacaataagatacattaat 13831969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 652 - 742
Target Start/End: Complemental strand, 34604927 - 34604837
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 742  Q
    ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34604927 tccctccggtccttattataagaaacaattgatttttttggttcattgtataagtgatgtatctagtctatatttacaataagatacatta 34604837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 7548499 - 7548591
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||| | | |||||||||||||||||| |||||||    
T  7548499 tccctccggtccttattataagaaacaattaatttttttggttcattgtgtaagtgatgtatttagactatatttacaataagatgcattaat 7548591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 45372851 - 45372759
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||| |||||||  |||||||| |||| ||| |||||||||||||| |||||||||| |||||||||||||||||    
T  45372851 tccctccggtccttattataagtaacaattgacttttttgattcaatgtgtaagtgatgtatctagtctatattttcaataagatacattaat 45372759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 664 - 744
Target Start/End: Original strand, 44579907 - 44579987
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||| |||||||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  44579907 ttattataagaaacaattaacttttttgatttattgtataagtaatatatctagtctatatttacaataagatacattaat 44579987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 43932051 - 43932143
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||||| || ||||||||||  |||||||||| || |||||||||||||    
T  43932051 tccctccggtccttattataagaaacaattgactttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaat 43932143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 659 - 744
Target Start/End: Complemental strand, 43292707 - 43292622
Alignment:
Q  659 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  43292707 ggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 43292622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 9420589 - 9420681
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||| | |||||  | |||| | |||||||||||||| |||||||||||||||||||| ||  || |||||||||    
T  9420589 tccctccggtccttattataagcagcaattgacgttttagattcattgtataagtaatgtatctggtctatatttataacgaggtacattaat 9420681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 43409836 - 43409928
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||| | |||||  |||||| | |||||||||||||| |||||||| ||||||||||| ||  || |||||||||    
T  43409836 tccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgaggtacattaat 43409928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 744
Target Start/End: Original strand, 40645714 - 40645804
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| ||||||||||||||||||| ||  ||||||   |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  40645714 cctccagtccttattataagaaacatttgactttttaagttcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 40645804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 652 - 726
Target Start/End: Complemental strand, 45180185 - 45180111
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 726  Q
    ||||| ||||| ||||||||| ||||||||  |||||||| |||||||| |||||||||||||| ||||||||||    
T  45180185 tcccttcggtctttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatattt 45180111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 628
Target Start/End: Original strand, 32897626 - 32897737
Alignment:
Q  525 ggataaaataatgttatcatctttcttatcatgcatgcaccaa--------taggataaatgcctatcatgttactatcatatcatatctttatctattt 616  Q
    |||||||| ||||||||| |||||||||||||   ||||||||        ||||||||||| ||||||||| |||||| ||||||||||| ||| ||||    
T  32897626 ggataaaaaaatgttatcctctttcttatcatatctgcaccaaacgtatgataggataaatgtctatcatgtcactatcctatcatatcttgatccattt 32897725  T
Q  617 tctaattatatc 628  Q
    |||||| |||||    
T  32897726 tctaatcatatc 32897737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 655 - 744
Target Start/End: Complemental strand, 34745400 - 34745311
Alignment:
Q  655 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| || ||||||||||||||| ||   ||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  34745400 ctccgatctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 34745311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 715
Target Start/End: Original strand, 34745259 - 34745322
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| | |||| | ||||||||    
T  34745259 tccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatct 34745322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 715
Target Start/End: Original strand, 43292570 - 43292633
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| | |||| | ||||||||    
T  43292570 tccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatct 43292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 715
Target Start/End: Complemental strand, 43932195 - 43932132
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||| |||| | ||||||||    
T  43932195 tccctccggtccttattataagaaacaattgactttttagattcattgaataattaatgtatct 43932132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 727
Target Start/End: Original strand, 9550111 - 9550186
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    ||||||||||| ||||||||||||| ||||   |||||   |||||||  |||||||||||||| |||||||||||    
T  9550111 tccctccggtctttattataagaaataattgattttttaaattcattgggtaagtgatgtatctagtctatattta 9550186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 742
Target Start/End: Complemental strand, 24599808 - 24599725
Alignment:
Q  659 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 742  Q
    ||||||||| |||||||||||||   ||||| | |||||||||||| ||||||||||   ||||||||| ||| | ||||||||    
T  24599808 ggtccttataataagaaacaattgattttttagattcattgtataactgatgtatctaacctatatttataatgaaatacatta 24599725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 658 - 744
Target Start/End: Complemental strand, 9633221 - 9633135
Alignment:
Q  658 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| |||||||||||| ||  ||||||   |||||||| |||   |||||||| ||||||||||| || |||||||||||||    
T  9633221 cggtccttcttataagaaacatttgactttttaagttcattgtgtaaacaatgtatctagtctatatttataacaagatacattaat 9633135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 12958921 - 12958851
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  12958921 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 12958851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 22429680 - 22429610
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  22429680 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 22429610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 666 - 744
Target Start/End: Original strand, 38298517 - 38298595
Alignment:
Q  666 attataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||| ||||  ||||||   |||||||| |||||||||||||| | ||||||||| ||  ||||||||||||    
T  38298517 attataagaaataattgactttttaagttcattgtgtaagtgatgtatctagcctatatttataacgagatacattaat 38298595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 44796487 - 44796417
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  44796487 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 44796417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 5356937 - 5356876
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||| ||| |||||||||| |||| ||| |||||| | || ||||||||||||||||||||    
T  5356937 cctcccgtctttattataagcaacagttaactttttagatttattgtataagtgatgtatct 5356876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 9633089 - 9633146
Alignment:
Q  658 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||||||  | |||| | |||||||||||| | ||||||||    
T  9633089 cggtccttattataagaaacaattgacgttttagattcattgtataattaatgtatct 9633146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 656 - 725
Target Start/End: Complemental strand, 10839904 - 10839836
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||  |||||||||||| ||| |||||| | ||||||| |||| |||||||| |||||||||||    
T  10839904 tccggtcctatttataagaaacatttaacttttt-gattcattgcataaatgatgtatttggtctatatt 10839836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 649 - 744
Target Start/End: Original strand, 45977093 - 45977188
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  45977093 tattacctccggtccttattataagaaacaattaacttttttggtttattgtataggtgatgtatctagtctatatttacaataagatacattaat 45977188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 13770855 - 13770763
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||| |||||||||||||||| ||  |||||||  || ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  13770855 tccctccggttcttattataagaaacagtttacttttttaatttattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 13770763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 651 - 744
Target Start/End: Complemental strand, 15699611 - 15699518
Alignment:
Q  651 ttccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| |||||||||||| |||||||||   ||||| | || |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  15699611 ttccctcccgtccttattatatgaaacaattgaatttttaggtttattgtataagtgatgtatctagtctatatttacaacaagatacattaat 15699518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 656 - 744
Target Start/End: Complemental strand, 19998553 - 19998465
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||   ||||| | |||||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  19998553 tccggtccttattataagaaacaattgaatttttagattcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaat 19998465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 27687843 - 27687935
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||| |||||||||||||| ||||   ||||||  |||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  27687843 tccctccggttcttattataagaaataattgaattttttagttcattatgtaagtgatgtatctagtctatatttacaataagatacattaat 27687935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 656 - 744
Target Start/End: Complemental strand, 44224411 - 44224323
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| ||||||||||| ||| |||||  ||||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  44224411 tccggcccttattataaaaaataattaatttttttggttcattgtacaagtgatgtatctagactatatttacaataagatacattaat 44224323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 29438282 - 29438192
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| || || |||||||||||||||  |||||||  |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  29438282 cctccgctcattgttataagaaacaattgacttttttagttcattgtgtaagtgatgtatctagtctatattttcaataagatacattaat 29438192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 51590576 - 51590484
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| | ||  | |||| | |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  51590576 tccctccggtccttattataagaaaaagttgaccttttagattcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 51590484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 52279236 - 52279328
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||| |||| |||||   ||||||| |||||||| |||||||||||||  ||||||||||||||||||||| ||||||    
T  52279236 tccctctggtccttattattagaagcaattgatttttttggttcattgtgtaagtgatgtatcaagtctatatttacaataagatatattaat 52279328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 654 - 744
Target Start/End: Original strand, 52030872 - 52030962
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||| ||||   ||||| ||||||| || ||||||||||||||  | |||||||| ||||||||||||||||    
T  52030872 cctccggtccttattataagaaaaaattgattttttagtttcatcgtgtaagtgatgtatctaatttatatttataataagatacattaat 52030962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 13321860 - 13321768
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||||||||||| ||   ||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  13321860 tccctctggtccttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 13321768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 660 - 744
Target Start/End: Complemental strand, 31050388 - 31050304
Alignment:
Q  660 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||  |||||| | || ||||| |||||||||||| | |||||||||||||| || ||||||||||    
T  31050388 gtccttattataagaaacaattgactttttaggtttattgtgtaagtgatgtatttagtctatatttacaacaaaatacattaat 31050304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 656 - 744
Target Start/End: Original strand, 34174892 - 34174980
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| |||||||||||||||||||||  |||||| | |||||||| |||||||||||| | || ||||||| ||| |||||||||||||    
T  34174892 tccgatccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatttagtttatatttgcaacaagatacattaat 34174980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 13320305 - 13320397
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||| ||||||||||||||||||||  ||||||  || ||||| ||| |||||||| |   ||||||||||||||||||| ||||||    
T  13320305 tccctccggttcttattataagaaacaattaattttttttgtttattgtgtaaatgatgtatttaaactatatttacaataagatatattaat 13320397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 48565673 - 48565581
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| | ||| ||||||   |||||||| || ||||||||| | ||||||||||| || ||||||| |||||    
T  48565673 tccctccggtccttattataagaaaaagttaactttttaagttcattgtgtaggtgatgtatttagtctatatttataacaagatactttaat 48565581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 26924359 - 26924286
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  26924359 tccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatatt 26924286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 652 - 740
Target Start/End: Complemental strand, 18038834 - 18038746
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 740  Q
    ||||||||||||||||||||| ||||| ||  |||||| | |||||||| ||||||||||||||  |||| ||||| ||  ||||||||    
T  18038834 tccctccggtccttattataaaaaacatttgactttttagattcattgtttaagtgatgtatctaatctacatttataacgagatacat 18038746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 22182767 - 22182859
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||| |||||||  |||||| | || ||||| |||||||||||||| | | ||||||| ||  |||| |||||||    
T  22182767 tccctccggtccttattataagtaacaattgactttttagatttattgtgtaagtgatgtatctagcccatatttataacgagatgcattaat 22182859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 649 - 725
Target Start/End: Original strand, 26760172 - 26760248
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    ||||||||| ||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  26760172 tattccctcgggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatatt 26760248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 631
Target Start/End: Complemental strand, 42471333 - 42471273
Alignment:
Q  571 gataaatgcctatcatgttactatcatatcatatctttatctattttctaattatatcatg 631  Q
    |||||||| ||||||| | | |||||||||||||||||||||||||||||||  |||||||    
T  42471333 gataaatgtctatcatatcattatcatatcatatctttatctattttctaatcctatcatg 42471273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 649 - 725
Target Start/End: Original strand, 44939065 - 44939141
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||| |||||||||||  |||||||||||| ||  |||||||  |||||||||||| |||||||| |||||||||||    
T  44939065 tatttcctccggtcctatttataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatatt 44939141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 37179054 - 37178964
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| ||| ||||||||||||| ||  |||||||| || ||||||||| |||||||| | ||||||||||   | |||||||||||||    
T  37179054 cctccggccctaattataagaaacatttgacttttttgatttattgtataaatgatgtatttagtctatattttagacaagatacattaat 37178964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 725
Target Start/End: Complemental strand, 34332621 - 34332549
Alignment:
Q  653 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    ||||| ||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  34332621 ccctctggtcctatttataagaaacatttgacttttttgattcattggataaatgatgtatttggtctatatt 34332549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 725
Target Start/End: Complemental strand, 49944977 - 49944906
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||  ||| |||||||| ||   ||||||| |||||||||||| |||||||| |||||||||||    
T  49944977 cctccggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatatt 49944906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 715
Target Start/End: Original strand, 51590432 - 51590495
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||| ||||||||  |||||||| ||||| | |||| | ||||||||    
T  51590432 tccctccggtccttattataaaaaacaattgacttttttggttcatagaataattaatgtatct 51590495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 519835 - 519908
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||| ||||| ||  |||||||| || ||||||||| |||||||| || ||||||||    
T  519835 tccctccggtcctatttataataaacatttgacttttttgatttattgtataaatgatgtatttgatctatatt 519908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 18744701 - 18744629
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  ||| |||||||| ||| |||||||  ||||||| |||| |||||||| |||||||||||    
T  18744701 tccctccggtcctatttaaaagaaacatttaactttttttattcattgcataaatgatgtat-tggtctatatt 18744629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 29064149 - 29064243
Alignment:
Q  652 tccctccggtccttatta---taagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| ||||||||||   ||||||| |||||  ||||| | |||||||||||| |||||||| |  |||||||||||||||| ||| ||||||    
T  29064149 tccctcccgtccttattactataagaaaaaattat-tttttagattcattgtataaatgatgtatttaatctatatttacaataaaatatattaat 29064243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 2e-30; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 41487937 - 41487845
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||||   ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  41487937 tccctccggtccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 41487845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 655 - 744
Target Start/End: Complemental strand, 22618306 - 22618217
Alignment:
Q  655 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  22618306 ctccggtccttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatacattaat 22618217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 656 - 744
Target Start/End: Original strand, 41395668 - 41395756
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  41395668 tccgatccttattataagaaacaattaacttttttaattcattgtataagtgatgtatctagtctatatttataataagatatattaat 41395756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 664 - 744
Target Start/End: Complemental strand, 45123379 - 45123299
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  45123379 ttattataagaaataattaacttttttgattcattgtataagtgatgtatctaatctatatttataataagatacattaat 45123299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 47280176 - 47280267
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| || ||||||||||||||||||| |||||||||| |||||||||| | |||||| | ||||||||||||||||||||||||||||    
T  47280176 tccctccgatctttattataagaaacaattaacttttttgtt-cattgtataaataatgtatttagtctatatttacaataagatacattaat 47280267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 656 - 744
Target Start/End: Original strand, 47484027 - 47484115
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||   ||||||  |||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  47484027 tccggtccttattataagaaacaattgattttttttattcattgcgtaagtgatgtatctagtctatatttacaataagatacattaat 47484115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 649 - 744
Target Start/End: Original strand, 7456418 - 7456513
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| |||||||||||||||||||||| | ||  |||||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||    
T  7456418 tattcgctccggtccttattataagaaatatttgactttttagattcattgtataaatgatgtatctagtctatatttacaacaagatacattaat 7456513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 652 - 737
Target Start/End: Complemental strand, 27320440 - 27320355
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagata 737  Q
    |||||| |||||||||||||||||||||||   ||||||| |||||||||||||| |||| ||| |||||||||||||||||||||    
T  27320440 tccctctggtccttattataagaaacaattgatttttttggttcattgtataagtaatgtttctagtctatatttacaataagata 27320355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 740
Target Start/End: Original strand, 40234768 - 40234856
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 740  Q
    |||||||||| |||||||||||||||||||  |||||| | |||||||| ||| |||||||||| |||||||||||||| |||||||||    
T  40234768 tccctccggttcttattataagaaacaattgactttttagattcattgtgtaactgatgtatctagtctatatttacaacaagatacat 40234856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 649 - 744
Target Start/End: Complemental strand, 10674272 - 10674177
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||| |||||||||||||||||||||  |||||| | |||||| | ||||||||||||||  |||||||||| || |||||||||||||    
T  10674272 tattccctccgatccttattataagaaacaattgactttttagattcattatgtaagtgatgtatctaatctatatttataacaagatacattaat 10674177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 656 - 744
Target Start/End: Complemental strand, 18064864 - 18064776
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||| ||||||||||| ||  | |||||  |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  18064864 tccggtccttaatataagaaacagttgacatttttagttcattgtttaagtgatgtatctagtctatattttcaataagatacattaat 18064776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 47612436 - 47612344
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||| | |||||  |||||| | |||||||||||||| |||||||| ||||||||||| ||  ||||||||||||    
T  47612436 tccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttataacgagatacattaat 47612344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 659 - 744
Target Start/End: Original strand, 37006465 - 37006550
Alignment:
Q  659 ggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||||||||||||  |||||||  || |||||||||||||||||||  || ||||||||||||| |||||||||||    
T  37006465 ggtcgttattataagaaacaattgacttttttagtttattgtataagtgatgtatccagtttatatttacaatatgatacattaat 37006550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 24164662 - 24164570
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| |||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||||||||  || |||||||||||||    
T  24164662 tccctccgatccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttctaacaagatacattaat 24164570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 45025738 - 45025648
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||| ||||||||||||||| ||   ||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  45025738 cctccggtctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 45025648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 652 - 713
Target Start/End: Complemental strand, 24932515 - 24932454
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 713  Q
    |||||||| |||||||||||||| ||||||| |||||||  |||||||||||||||||||||    
T  24932515 tccctccgatccttattataagagacaattaacttttttagttcattgtataagtgatgtat 24932454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 654 - 743
Target Start/End: Complemental strand, 33901182 - 33901093
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaa 743  Q
    ||||||||| ||||||||||||||| ||  |||||| | |||||| | ||| |||||||||| ||||||||||| || ||||||||||||    
T  33901182 cctccggtctttattataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatttataacaagatacattaa 33901093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 744
Target Start/End: Complemental strand, 41089001 - 41088906
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||||||||||||||||||||||  |||||| | || || || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  41089001 tattacctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 41088906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 744
Target Start/End: Original strand, 29559441 - 29559531
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||||||||||||  |||||| | ||||| || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  29559441 cctccgatccttattataagaaacaattgactttttaggttcatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 29559531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 662 - 744
Target Start/End: Original strand, 33039572 - 33039654
Alignment:
Q  662 ccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| |||||||||||  |||||| | |||||||| | || ||||||||| |||||||||||||| | |||||||||||    
T  33039572 ccttattaaaagaaacaattgactttttaggttcattgtgttagggatgtatctagtctatatttacaacatgatacattaat 33039654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 28677319 - 28677392
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  28677319 tccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 28677392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 36245378 - 36245451
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  36245378 tccctccggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 36245451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 656 - 740
Target Start/End: Original strand, 3633197 - 3633281
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 740  Q
    ||||||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||| ||||| ||  ||||||||    
T  3633197 tccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacat 3633281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 649 - 713
Target Start/End: Complemental strand, 13860366 - 13860302
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 713  Q
    ||||||||||| |||||||||||||||||||||  |||||| | |||||||||||| | ||||||    
T  13860366 tattccctccgatccttattataagaaacaattgactttttagattcattgtataattaatgtat 13860302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 744
Target Start/End: Complemental strand, 39413966 - 39413882
Alignment:
Q  660 gtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| ||||||||||||||||   |||||   |||||||||||||||||||||||  || |||||||||| | |||||||||||    
T  39413966 gtcctaattataagaaacaattgattttttaagttcattgtataagtgatgtatctaatcaatatttacaacatgatacattaat 39413882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 649 - 744
Target Start/End: Complemental strand, 14543417 - 14543322
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| || |||||||||||||||||||||   | |||   || ||| | |||||||||||||| |||||||||||||  |||||||||||||    
T  14543417 tattcccttcgatccttattataagaaacaattgattgtttaagtttattatgtaagtgatgtatctagtctatatttacatcaagatacattaat 14543322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 702 - 744
Target Start/End: Complemental strand, 12807004 - 12806962
Alignment:
Q  702 taagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  12807004 taagtgatgtatgtagtctatatttacaataagatacattaat 12806962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 649 - 715
Target Start/End: Original strand, 24164515 - 24164581
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    |||||||||||||||||||||||||||||||||   ||||||| ||||| | |||| | ||||||||    
T  24164515 tattccctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatct 24164581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 668 - 725
Target Start/End: Original strand, 8566099 - 8566156
Alignment:
Q  668 tataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    ||||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||    
T  8566099 tataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatatt 8566156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 42078150 - 42078191
Alignment:
Q  526 gataaaataatgttatcatctttcttatcatgcatgcaccaa 567  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  42078150 gataaaataatgttatcatatttcttatcatgcgtgcaccaa 42078191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 725
Target Start/End: Original strand, 2523787 - 2523845
Alignment:
Q  667 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||| ||  |||||||| ||||||| ||||  |||||||||||||||||||    
T  2523787 ttataagaaacatttgacttttttgattcattgcataaacgatgtatctggtctatatt 2523845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 4826907 - 4826837
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  4826907 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 4826837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 725
Target Start/End: Complemental strand, 6838506 - 6838448
Alignment:
Q  667 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  6838506 ttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 6838448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Original strand, 28020003 - 28020073
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||| ||||||  |||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  28020003 tccctctggtcctatttataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 28020073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 722
Target Start/End: Original strand, 32811396 - 32811450
Alignment:
Q  668 tataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    ||||||||||||||  |||||||| ||||||| |||| |||||||| ||||||||    
T  32811396 tataagaaacaatttacttttttgattcattgaataattgatgtatttggtctat 32811450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 658 - 744
Target Start/End: Complemental strand, 40198744 - 40198658
Alignment:
Q  658 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| |||||||||||||| |  |||||||  || ||| | |||| ||||||| | |||||||||||||| ||||| |||||||    
T  40198744 cggtcctaattataagaaacaaatgacttttttagtttattatgtaagcgatgtatttagtctatatttacaacaagatgcattaat 40198658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 656 - 726
Target Start/End: Complemental strand, 41850738 - 41850668
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 726  Q
    |||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| || |||||||||    
T  41850738 tccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttgctctatattt 41850668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 11668017 - 11668090
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||| ||| || ||||||||    
T  11668017 tccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatatt 11668090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 28248579 - 28248485
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttc----attgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||| |||||| |||||||||||| |||||| | |||    ||||| |||||||||||| | ||||||||||| ||  |||| |||||||    
T  28248579 cctccggtcattattacaagaaacaattaactttttaggttcattaattgtgtaagtgatgtatatagtctatatttataacgagatgcattaat 28248485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 713
Target Start/End: Complemental strand, 40600047 - 40599998
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 713  Q
    |||||||||| |||||||| |||||| | |||||||| ||||||||||||    
T  40600047 ttattataagcaacaattaactttttaggttcattgtgtaagtgatgtat 40599998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 713
Target Start/End: Original strand, 41088854 - 41088915
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 713  Q
    |||||||||||||||||| |||||||||||  |||||| | ||||||| |||| | ||||||    
T  41088854 tccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtat 41088915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 3e-29; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 646 - 744
Target Start/End: Complemental strand, 30438895 - 30438797
Alignment:
Q  646 tactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| |||||||| |||||||||||||||| ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  30438895 tactactccctccgatccttattataagaaataattaacttttttggtttattgtataagtgatgtatctagtctatatttacaataaaatacattaat 30438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 28605572 - 28605664
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| |   ||||||||||||||||||||||||||    
T  28605572 tccctctggtccttattataagaaacaattaacttttttggttcattgtgtaagtgatgtatttaaactatatttacaataagatacattaat 28605664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 653 - 744
Target Start/End: Original strand, 10145218 - 10145309
Alignment:
Q  653 ccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| |||||||||||||||| ||||   ||||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||||    
T  10145218 ccctccgatccttattataagaaataattgatttttttgattcatcatataagtgatgtatctagtctatatttacaataagatacattaat 10145309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 654 - 744
Target Start/End: Original strand, 12217494 - 12217585
Alignment:
Q  654 cctccggtccttattataagaaacaatt-agcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||| |||||||| |  ||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12217494 cctccgatccttattataaaaaacaattgattttttttggtttattgtataagtgatgtatctagtctatatttacaataagatacattaat 12217585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 12605612 - 12605704
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| |||||||||||||||||||||   ||||||  ||||||   |||||||||||| | ||||||||||||||||||||||||||||    
T  12605612 tccctccgttccttattataagaaacaattgattttttttattcattacgtaagtgatgtatttagtctatatttacaataagatacattaat 12605704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 652 - 727
Target Start/End: Complemental strand, 2913479 - 2913404
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    |||||||||||||||||||||| |||||||  |||||| | |||||||||||||| |||||||| |||||||||||    
T  2913479 tccctccggtccttattataagcaacaattgactttttaggttcattgtataagtaatgtatctagtctatattta 2913404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 652 - 743
Target Start/End: Complemental strand, 23916273 - 23916182
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaa 743  Q
    ||||||||||||||||||||||||||||||  |||||| | |||||||| || ||||| |||||  |||||||||| ||  |||||||||||    
T  23916273 tccctccggtccttattataagaaacaattgactttttagattcattgtgtatgtgatatatctaatctatatttataacgagatacattaa 23916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 8265116 - 8265026
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||||||| | ||   |||||   |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  8265116 cctccgttccttattataagaaaaagttgattttttaagttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 8265026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 738
Target Start/End: Complemental strand, 17599601 - 17599513
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtata--agtgatgtatctggtctatatttacaataagatac 738  Q
    ||||| |||||||||||| || ||| ||||  |||||||| |||||||||||  |||  ||||||| ||||||||||||||||||||||    
T  17599601 tcccttcggtccttattacaataaataattgacttttttgattcattgtatataagttgtgtatctagtctatatttacaataagatac 17599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 3065029 - 3064937
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||  |||||||||| | ||  |||||||| ||||||| |||| || ||||| ||||||||||||   | |||||||||||||    
T  3065029 tccctccggtcctatttataagaaatattttacttttttgattcattgcataaatggtgtatttggtctatattttatacaagatacattaat 3064937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 656 - 744
Target Start/End: Complemental strand, 9343262 - 9343174
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||| |||||||||  |||||    || ||||| ||| | |||||||| ||||||||||| || |||||||||||||    
T  9343262 tccggtccttattataggaaacaattgacttttcaaatttattgtgtaaataatgtatctagtctatatttataacaagatacattaat 9343174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 661 - 723
Target Start/End: Complemental strand, 24986069 - 24986007
Alignment:
Q  661 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctata 723  Q
    |||||||||||||| ||||||  |||||| | ||||||| |||| |||||||| |||||||||    
T  24986069 tccttattataagagacaattcactttttaggttcattggataattgatgtatatggtctata 24986007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 726
Target Start/End: Original strand, 33119906 - 33119980
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 726  Q
    ||||| |||||||  |||||||||||| ||  ||| |||| |||||||||||| || ||||| ||||||||||||    
T  33119906 tcccttcggtcctatttataagaaacatttgacttctttgattcattgtataaatgttgtatttggtctatattt 33119980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 1e-28; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 655 - 744
Target Start/End: Original strand, 27302084 - 27302173
Alignment:
Q  655 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  27302084 ctccggtctttattataagaaagaattaacttttttggttcattgtataagtgatgtatctagtctatatttacaattagatacattaat 27302173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 658 - 744
Target Start/End: Complemental strand, 16123896 - 16123810
Alignment:
Q  658 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  16123896 cggtccttattataaaaaacaattaacttttttggttcattgtataagtaatgtatctagtctatatttacaataagatatattaat 16123810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 43901725 - 43901635
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||| || |||||||||| |||||||||||||||||    
T  43901725 cctccggtccttattataagaaacaattaacttttttggttcattgtgtaaatgatgtacctagtctatattttcaataagatacattaat 43901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 53284460 - 53284370
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||   ||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  53284460 cctccggtccttattataagaaacaattgatttttttggtttattgtataagtgatgtatctagtctacatttacaataagatacattaat 53284370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 45113736 - 45113828
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| | |||||||||||||||||||||   ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  45113736 tccctctgatccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttacaataagatacattaat 45113828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 662 - 744
Target Start/End: Original strand, 50100206 - 50100288
Alignment:
Q  662 ccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||  |||||||  ||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  50100206 ccttattataagaaacaattgacttttttagttcattgtataagtgatgtatctagtctatatttataataagatacgttaat 50100288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 31376177 - 31376269
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  31376177 tccctccggtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttataagaagatacattaat 31376269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 652 - 740
Target Start/End: Complemental strand, 2544605 - 2544516
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat-atttacaataagatacat 740  Q
    |||||||||||||||||| |||||||||||  |||||| | ||||||||||||||||||||| |||||||| ||||| || |||||||||    
T  2544605 tccctccggtccttattacaagaaacaattgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacat 2544516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 647 - 744
Target Start/End: Original strand, 39616908 - 39617005
Alignment:
Q  647 actattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||||||||||||||||||||| ||  |||||  | |||||| | |||||||||||||| ||||||||||| || |||||||||||||    
T  39616908 actactccctccggtccttattataagaaacatttgacttttaaggttcattatgtaagtgatgtatctagtctatatttataacaagatacattaat 39617005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 53703877 - 53703784
Alignment:
Q  652 tccctccggtccttattataagaaacaattag-cttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| || | | | |||| | |||||||| |||||||||||||| ||||||||||| || |||||||||||||    
T  53703877 tccctccggtccttattataagaaaaaagttgaccttttaggttcattgtgtaagtgatgtatctagtctatatttataacaagatacattaat 53703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Complemental strand, 8769279 - 8769188
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||| | ||| ||||||   |||||||| ||||||||||||||  |||||||||| || |||||||||||||    
T  8769279 tccctccggtccttattataagaaa-agttaactttttaagttcattgtgtaagtgatgtatctaatctatatttataacaagatacattaat 8769188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 652 - 723
Target Start/End: Original strand, 42896144 - 42896215
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctata 723  Q
    ||||||||||| |||||||||||| |||||  |||||| | ||||||| |||| ||||||||||||||||||    
T  42896144 tccctccggtctttattataagaagcaattcactttttaggttcattgaataactgatgtatctggtctata 42896215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 655 - 744
Target Start/End: Original strand, 48643609 - 48643698
Alignment:
Q  655 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||||||||  |||||| | || || || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  48643609 ctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 48643698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 51517103 - 51517030
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  51517103 tccctccggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatatt 51517030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 723
Target Start/End: Complemental strand, 21663032 - 21662961
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctata 723  Q
    ||||||||||| |  |||||||||||| ||| |||||||| ||||||| |||| |||||||| |||||||||    
T  21663032 tccctccggtcttatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctata 21662961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 669 - 744
Target Start/End: Complemental strand, 21944418 - 21944343
Alignment:
Q  669 ataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||   ||||||| ||| |||| |||||| ||||||| |||||||| |||| ||||||||||||||    
T  21944418 ataagaaacaattgatttttttggttccttgtgtaagtggtgtatctagtctatatctacactaagatacattaat 21944343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 715
Target Start/End: Original strand, 50659951 - 50660014
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    |||||| |||||||||||| ||||||||||   ||||||| |||||||| ||||||||||||||    
T  50659951 tccctctggtccttattattagaaacaattgatttttttggttcattgtgtaagtgatgtatct 50660014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 715
Target Start/End: Original strand, 53703732 - 53703795
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||| | |||| | ||||||||    
T  53703732 tccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatct 53703795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 704
Target Start/End: Original strand, 2544433 - 2544491
Alignment:
Q  646 tactattccctccggtccttattataagaaacaattagcttttttgtttcattgtataa 704  Q
    ||||| ||||||||||||||||||||||||||||||  |||||| | ||||||| ||||    
T  2544433 tactactccctccggtccttattataagaaacaattgactttttaggttcattgaataa 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 744
Target Start/End: Original strand, 24489317 - 24489407
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| |||||||||||||| ||| ||||  |||||||  || ||| | || ||||||||||| || ||||||||| |||||||||||||||    
T  24489317 cctctggtccttattataaaaaataattgacttttttagtttattttgtaggtgatgtatctagtttatatttactataagatacattaat 24489407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 12064911 - 12064984
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| || | |||||||| |||||||||||    
T  12064911 tccctccggtcctacttataagaaacattttacttttttgattcattgcattaatgatgtatttggtctatatt 12064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 715
Target Start/End: Complemental strand, 31376321 - 31376258
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    |||||||||||||||||| |||||||||||  |||||||| ||||| | |||| | ||||||||    
T  31376321 tccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatct 31376258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 715
Target Start/End: Complemental strand, 39617057 - 39616994
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatct 715  Q
    |||||||||||||||||| |||||||||||  |||||||| ||||| | |||| | ||||||||    
T  39617057 tccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatct 39616994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 744
Target Start/End: Original strand, 44118182 - 44118277
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||  |||||||| |||| | ||  |||||| | |||||||| ||| |||||||||| ||||||||||| || || ||||||||||    
T  44118182 tattacctccggtttttattataggaaatatttgactttttagattcattgtgtaaatgatgtatctagtctatatttataacaatatacattaat 44118277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 649 - 679
Target Start/End: Original strand, 25294779 - 25294809
Alignment:
Q  649 tattccctccggtccttattataagaaacaa 679  Q
    |||||||||||||||||||||||||||||||    
T  25294779 tattccctccggtccttattataagaaacaa 25294809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 702 - 744
Target Start/End: Original strand, 48346502 - 48346544
Alignment:
Q  702 taagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||| ||||||||||| || |||||||||||||    
T  48346502 taagtgatgtatctagtctatatttataacaagatacattaat 48346544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 718
Target Start/End: Original strand, 53441909 - 53441975
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggt 718  Q
    |||||||||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| ||||    
T  53441909 tccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggt 53441975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 681
Target Start/End: Complemental strand, 19227454 - 19227425
Alignment:
Q  652 tccctccggtccttattataagaaacaatt 681  Q
    ||||||||||||||||||||||||||||||    
T  19227454 tccctccggtccttattataagaaacaatt 19227425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 655 - 724
Target Start/End: Complemental strand, 19899756 - 19899687
Alignment:
Q  655 ctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatat 724  Q
    |||||||||||||||||| ||||||||  || | | | |||||||| ||| |||||||||| ||||||||    
T  19899756 ctccggtccttattataaaaaacaattgactctataggttcattgtgtaaatgatgtatctagtctatat 19899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 727
Target Start/End: Original strand, 25313286 - 25313355
Alignment:
Q  658 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    ||||||||||||||| ||| ||||   ||||| | |||||||| |||||||||||| | |||||||||||    
T  25313286 cggtccttattataaaaaataattgattttttaggttcattgtgtaagtgatgtatttagtctatattta 25313355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 40417636 - 40417677
Alignment:
Q  526 gataaaataatgttatcatctttcttatcatgcatgcaccaa 567  Q
    |||||||||||| |||||| ||||||||||||| ||||||||    
T  40417636 gataaaataatgctatcatatttcttatcatgcgtgcaccaa 40417677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 649 - 744
Target Start/End: Original strand, 25613 - 25708
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| || ||| |||||||||||||||| ||||||||||| ||||||||||||||||    
T  25613 tatttcctccggtccttattataaaaaacaattaacttttttggtttattatataagtgatgtatctagtctatatttataataagatacattaat 25708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 1e-25; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 36103395 - 36103487
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||| ||||||||| | |||||  |||||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  36103395 tccctccggtccttattataataaacaattaacatttttagttcattgtgtaagtgatgtatctagactatatttacaataagatacattaat 36103487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 654 - 742
Target Start/End: Original strand, 40534517 - 40534605
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacatta 742  Q
    ||||||||||||||||||||||||||||   ||||||  |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  40534517 cctccggtccttattataagaaacaattgatttttttagttcattgtataaatgatgtatctagtctatatttacaataagatacatta 40534605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 649 - 744
Target Start/End: Complemental strand, 45076491 - 45076396
Alignment:
Q  649 tattccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| |||||||||||||||||| ||||||||  |||||||| |||||||| |||||||||||||| |||||||| |||||||| ||||||||||    
T  45076491 tattctctccggtccttattataaaaaacaattgacttttttggttcattgtgtaagtgatgtatctagtctatatgtacaataaaatacattaat 45076396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 676 - 744
Target Start/End: Original strand, 23464522 - 23464590
Alignment:
Q  676 acaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  23464522 acaattaacttttttggttcattgtataagagatgtatctagtctatatttacaataagatacattaat 23464590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 661 - 744
Target Start/End: Original strand, 15239703 - 15239786
Alignment:
Q  661 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||   ||| ||| |||||||| |||||||||||||| ||||||||||||||||||||| ||||||    
T  15239703 tccttattataagaaacaattgattttgttggttcattgtgtaagtgatgtatctagtctatatttacaataagatatattaat 15239786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 659 - 744
Target Start/End: Original strand, 28143752 - 28143839
Alignment:
Q  659 ggtccttattata--agaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||  ||||||||||   ||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  28143752 ggtccttattatattagaaacaattgatttttttggttcattgtgtaagtgatgtatctagtctatatttataataagatacattaat 28143839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 654 - 744
Target Start/End: Original strand, 3365279 - 3365369
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||| |||| ||||||||||||| | ||| |||||| | |||||||||||||||||||||||  |||||||||| || |||||| ||||||    
T  3365279 cctctggtctttattataagaaaaatttaactttttaggttcattgtataagtgatgtatctaatctatatttataacaagatatattaat 3365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 744
Target Start/End: Complemental strand, 6971714 - 6971624
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| ||||||||||||||||||| ||  |||||| | |||||||| ||| ||||||||||  |||||||||| || || ||||||||||    
T  6971714 cctcctgtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctaatctatatttataacaatatacattaat 6971624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 744
Target Start/End: Original strand, 25795242 - 25795332
Alignment:
Q  654 cctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||||||||  |||||| | || || || ||||| |||||||| ||||||||||| ||  | ||||||||||    
T  25795242 cctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttataacgaaatacattaat 25795332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 664 - 744
Target Start/End: Complemental strand, 27306843 - 27306765
Alignment:
Q  664 ttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||   ||||||| || ||||| |||||   |||||| ||||||||||||||||||||||||||||    
T  27306843 ttattataagaaacaattgatttttttggtttattgtgtaagtc--gtatctagtctatatttacaataagatacattaat 27306765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 663 - 744
Target Start/End: Original strand, 27311590 - 27311671
Alignment:
Q  663 cttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||  |||||| | ||||||||| || |||| ||||| ||||||||||| || ||||||| |||||    
T  27311590 cttattataagaaacaattgactttttaggttcattgtacaaatgatatatctagtctatatttataacaagatacgttaat 27311671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 570 - 626
Target Start/End: Original strand, 29463290 - 29463346
Alignment:
Q  570 ggataaatgcctatcatgttactatcatatcatatctttatctattttctaattata 626  Q
    |||||||||  |||||||| ||||||||||| |||||| ||||||||||||||||||    
T  29463290 ggataaatgtttatcatgtcactatcatatcttatcttcatctattttctaattata 29463346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 726
Target Start/End: Complemental strand, 12962851 - 12962777
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattt 726  Q
    |||||| ||||||  |||||||||||| ||  |||||||| ||||||| |||| |||||||| ||||||||||||    
T  12962851 tccctctggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattt 12962777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 727
Target Start/End: Original strand, 38448946 - 38449015
Alignment:
Q  658 cggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    |||||||||| |||| ||||||||  ||||||   |||||||| ||||||||||||||| ||||||||||    
T  38448946 cggtccttatcataaaaaacaattgactttttatgttcattgtgtaagtgatgtatctgatctatattta 38449015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 744
Target Start/End: Complemental strand, 11724408 - 11724324
Alignment:
Q  661 tccttattataagaaacaattag-cttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||||||||||||||||||||| |||| | | || ||||| ||||| || ||||| ||||||||||| ||  ||||||||||||    
T  11724408 tccttattataagaaacaattagactttatagatttattgtgtaagtaatatatctagtctatatttataacgagatacattaat 11724324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 744
Target Start/End: Complemental strand, 41464819 - 41464768
Alignment:
Q  693 ttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||| |||||||||||||| ||||||||||| ||  ||||||||||||    
T  41464819 ttcattgtgtaagtgatgtatctagtctatatttataacgagatacattaat 41464768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 661 - 727
Target Start/End: Original strand, 11687486 - 11687552
Alignment:
Q  661 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    |||||||||||||||||||||  |||| |   || ||||| |||||||||||||| |||||||||||    
T  11687486 tccttattataagaaacaattgactttataaatttattgtgtaagtgatgtatctagtctatattta 11687552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 725
Target Start/End: Original strand, 41153128 - 41153186
Alignment:
Q  667 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||| ||  |||||||| ||||||| |||| |||||||| |||||||||||    
T  41153128 ttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatatt 41153186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45034543 - 45034473
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45034543 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45034473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45571175 - 45571105
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45571175 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45571105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45574842 - 45574772
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45574842 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45574772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45578509 - 45578439
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45578509 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45582176 - 45582106
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45582176 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45582106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45585843 - 45585773
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45585843 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45585773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45589510 - 45589440
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45589510 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45589440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45593177 - 45593107
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45593177 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45593107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45596844 - 45596774
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45596844 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45596774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45600511 - 45600441
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45600511 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45600441  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45604178 - 45604108
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45604178 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45604108  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45607845 - 45607775
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45607845 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45607775  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45611512 - 45611442
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45611512 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45611442  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 722
Target Start/End: Complemental strand, 45615179 - 45615109
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctat 722  Q
    |||||||||||||   ||||||||||||||  |||||||| ||||||| |||  |||||||| ||||||||    
T  45615179 tccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat 45615109  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 744
Target Start/End: Original strand, 4410794 - 4410871
Alignment:
Q  667 ttataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||| ||| | |||||| || |||| |||| |||||||| || |||||||||  || |||||||||||||    
T  4410794 ttataagaaacatttaacctttttgatttattgcataaatgatgtatttgatctatattttaaacaagatacattaat 4410871  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 744
Target Start/End: Original strand, 9373404 - 9373488
Alignment:
Q  660 gtccttattataagaaacaatt-agcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| ||||||||||||||| || ||||  |||| ||| | |||||||||||| | |||||||||||||| ||||||| |||||    
T  9373404 gtccttgttataagaaacaattgagtttttaagttt-attatgtaagtgatgtatgtagtctatatttacaacaagatacgttaat 9373488  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Complemental strand, 12486138 - 12486065
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||| ||||||  ||| |||||||||||  |||||| | ||||||| |||| |||||||| |||||||||||    
T  12486138 tccctctggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggtctatatt 12486065  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 727
Target Start/End: Complemental strand, 14329270 - 14329209
Alignment:
Q  666 attataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    ||||||||| ||||||  ||| || | |||||||| ||||||||||||||| ||||||||||    
T  14329270 attataagagacaattgacttgttaggttcattgtgtaagtgatgtatctgatctatattta 14329209  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 713
Target Start/End: Complemental strand, 25795384 - 25795323
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtat 713  Q
    |||||||||||||||||| |||||||||||  |||||| | ||||||| |||| | ||||||    
T  25795384 tccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtat 25795323  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 676
Target Start/End: Complemental strand, 39063803 - 39063766
Alignment:
Q  639 ctaaatgtactattccctccggtccttattataagaaa 676  Q
    ||||||||| || |||||||||||||||||||||||||    
T  39063803 ctaaatgtagtactccctccggtccttattataagaaa 39063766  T

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Target: scaffold0059 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 26588 - 26680
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||||||||||  |||  |||||| | |||||| | |||||||||||||| |||||||||||||| |||||||||||||    
T  26588 tccctccggtccttattataagaaaggattgactttttaggttcattatgtaagtgatgtatctagtctatatttacaacaagatacattaat 26680  T

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Target: scaffold0023 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 652 - 744
Target Start/End: Original strand, 112825 - 112917
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||| |||||||||||||||||||||||  | |||| | ||||||||| || ||||||||||  |||||||||| || |||||||||||||    
T  112825 tccctcgggtccttattataagaaacaattgacgttttaggttcattgtacaaatgatgtatctaatctatatttataacaagatacattaat 112917  T

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Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 655 - 744
Target Start/End: Original strand, 40195 - 40285
Alignment:
Q  655 ctccggtccttattataagaaacaattagctttttt-gtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||||||||| ||| || | | |||||| | |||||||| |||||||||||||| |||||||||||||| |||||| ||||||    
T  40195 ctccggtccttattataaaaaaaaaattgattttttaggttcattgtgtaagtgatgtatctagtctatatttacaacaagatatattaat 40285  T

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Target: scaffold0767 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 663 - 727
Target Start/End: Complemental strand, 3944 - 3880
Alignment:
Q  663 cttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    |||||||||||||||||||  |||||| | |||||||| |||||||||||||| |||||||||||    
T  3944 cttattataagaaacaattgactttttaggttcattgtgtaagtgatgtatctagtctatattta 3880  T

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Target: scaffold0767; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 652 - 699
Target Start/End: Original strand, 3811 - 3858
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattg 699  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  3811 tccctccggtccttattataagaaacaattgacttttttgattcattg 3858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 661 - 727
Target Start/End: Original strand, 3251 - 3317
Alignment:
Q  661 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatattta 727  Q
    |||||||||||||||||||||  ||||||   |||||||| |||||||||||||| |||||||||||    
T  3251 tccttattataagaaacaattgactttttatgttcattgtgtaagtgatgtatctagtctatattta 3317  T

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Target: scaffold0287 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 656 - 740
Target Start/End: Complemental strand, 12888 - 12804
Alignment:
Q  656 tccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacat 740  Q
    ||||||||||||||||||||||| ||  |||||| | |||||| | |||||||||||||| ||||| ||||| ||  ||||||||    
T  12888 tccggtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttataacgagatacat 12804  T

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Target: scaffold0474 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 11330 - 11386
Alignment:
Q  571 gataaatgcctatcatgttactatcatatcatatctttatctattttctaattatat 627  Q
    ||||||||  |||||||| |||||||||  ||||||||||| |||||||||||||||    
T  11330 gataaatgtttatcatgtcactatcatactatatctttatcaattttctaattatat 11386  T

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Target: scaffold0460 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 661 - 744
Target Start/End: Complemental strand, 12350 - 12267
Alignment:
Q  661 tccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    |||||||||||| ||| ||||  |||||| | || ||||| | |||||||||||| | |||||||||||| ||||||| |||||    
T  12350 tccttattataaaaaataattgactttttaggtttattgtgttagtgatgtatctagcctatatttacaagaagatacgttaat 12267  T

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Target: scaffold0377 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 11949 - 11990
Alignment:
Q  526 gataaaataatgttatcatctttcttatcatgcatgcaccaa 567  Q
    ||||||||||||||||||| |||| |||||||| ||||||||    
T  11949 gataaaataatgttatcatatttcctatcatgcgtgcaccaa 11990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 744
Target Start/End: Complemental strand, 19433 - 19348
Alignment:
Q  660 gtccttattataagaaacaattagcttttttg-tttcattgtataagtgatgtatctggtctatatttacaataagatacattaat 744  Q
    ||||| ||||| | ||||||||  |||||||| ||| ||| | |||||||||||  | ||||||||||||||||||||| ||||||    
T  19433 gtcctgattattataaacaattgacttttttggttttattttgtaagtgatgtaagtagtctatatttacaataagatatattaat 19348  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 725
Target Start/End: Original strand, 156770 - 156843
Alignment:
Q  652 tccctccggtccttattataagaaacaattagcttttttgtttcattgtataagtgatgtatctggtctatatt 725  Q
    |||||||||||||  |||||||||||| ||| |||||||  ||||||| ||||  ||| ||| |||||||||||    
T  156770 tccctccggtcctatttataagaaacatttaacttttttaattcattgcataaacgatatatttggtctatatt 156843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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