View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17030_low_10 (Length: 466)
Name: NF17030_low_10
Description: NF17030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17030_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 55 - 451
Target Start/End: Complemental strand, 36957312 - 36956916
Alignment:
| Q |
55 |
ctgttttttcttccgtgctctacaaattttaggcctcgtatttctgtgccaatgttctgtagtagaggcattattgtgatattggcttggttgttttt-c |
153 |
Q |
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| T |
36957312 |
ctgttttttcttccgtgctctacaaattttaggcctcatatttctgtgccaatgttctgtagtagaggcattattgtgatattggcttgggtgttttttc |
36957213 |
T |
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| Q |
154 |
aaatttaaataactcaaaaaatgaggagaaactttaacaaaatgataatttcaggtcacaaaagaaaaaagtgttatgcttgcatgatagaaagttagtt |
253 |
Q |
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| T |
36957212 |
aaatttaaataactcaaaaaatgaggagaaactttaacaaaatgataatttcaggtcacaaa-gaaaaaagtgttatgcttgcatgatagaaagttagtt |
36957114 |
T |
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| Q |
254 |
ctaccccaaagtacacaaccacagttcaatttccgaccaagattattagtgagtcgaaacaannnnnnngaagagttataatctcatgacactattgtga |
353 |
Q |
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| T |
36957113 |
ctaccccaaagtacacaaccacagttcaatttccgaccaaaattattagtgagtcgaaacaatttttttgaagagttataatctcatgacactattgtga |
36957014 |
T |
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| Q |
354 |
gagaccacaaaaatatgctctacaatatagacccaacttggaagtactaactaattgggctgtttttggttagtggtccaagaaggtattgcaagtag |
451 |
Q |
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| T |
36957013 |
gagaccacaaaaatatgctctacaatatagacccaacttggaagtactaactaattgggctgtttttggttagtggtccaagaaggtattgcaagtag |
36956916 |
T |
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