View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17030_low_32 (Length: 276)

Name: NF17030_low_32
Description: NF17030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17030_low_32
NF17030_low_32
[»] chr7 (40 HSPs)
chr7 (1-147)||(29403603-29403749)
chr7 (145-265)||(8076644-8076764)
chr7 (145-270)||(9650340-9650466)
chr7 (145-270)||(27256826-27256951)
chr7 (145-270)||(40864743-40864868)
chr7 (144-270)||(16459760-16459886)
chr7 (144-270)||(20488537-20488663)
chr7 (158-270)||(20485176-20485288)
chr7 (144-270)||(18426516-18426642)
chr7 (144-265)||(14928015-14928136)
chr7 (144-265)||(15351481-15351602)
chr7 (145-270)||(19640888-19641013)
chr7 (145-248)||(8954647-8954750)
chr7 (144-270)||(14259595-14259721)
chr7 (144-270)||(45169310-45169436)
chr7 (145-270)||(838812-838937)
chr7 (145-270)||(1203992-1204117)
chr7 (195-270)||(47102128-47102203)
chr7 (145-270)||(19096843-19096969)
chr7 (145-270)||(845988-846113)
chr7 (145-270)||(853365-853490)
chr7 (145-270)||(1211369-1211494)
chr7 (158-259)||(36477577-36477671)
chr7 (144-270)||(32302428-32302554)
chr7 (172-265)||(29727211-29727304)
chr7 (145-227)||(9008789-9008871)
chr7 (145-270)||(16580818-16580943)
chr7 (158-227)||(10499497-10499566)
chr7 (158-227)||(10504526-10504595)
chr7 (158-241)||(11017474-11017557)
chr7 (158-227)||(10532226-10532295)
chr7 (221-270)||(26341821-26341870)
chr7 (145-224)||(15566012-15566089)
chr7 (145-227)||(13343809-13343891)
chr7 (145-203)||(18385144-18385202)
chr7 (162-225)||(2629290-2629353)
chr7 (145-205)||(1043873-1043933)
chr7 (145-199)||(11297413-11297467)
chr7 (158-226)||(10488691-10488759)
chr7 (145-177)||(47102211-47102243)
[»] chr5 (28 HSPs)
chr5 (145-270)||(36936891-36937016)
chr5 (145-270)||(36941645-36941770)
chr5 (145-270)||(41997253-41997378)
chr5 (145-270)||(42002022-42002147)
chr5 (151-270)||(557285-557404)
chr5 (145-270)||(32460924-32461049)
chr5 (151-270)||(562057-562176)
chr5 (145-270)||(13300870-13300995)
chr5 (145-270)||(31732126-31732251)
chr5 (145-270)||(21323356-21323481)
chr5 (145-248)||(23976967-23977070)
chr5 (144-270)||(10754039-10754165)
chr5 (145-270)||(12044510-12044640)
chr5 (145-270)||(21826812-21826937)
chr5 (145-270)||(26869694-26869819)
chr5 (145-263)||(8770839-8770958)
chr5 (145-270)||(3666504-3666627)
chr5 (145-270)||(36949374-36949499)
chr5 (146-270)||(24435564-24435688)
chr5 (158-207)||(15395233-15395282)
chr5 (221-270)||(26667892-26667941)
chr5 (221-270)||(26939489-26939538)
chr5 (221-270)||(29167405-29167454)
chr5 (145-219)||(41099170-41099244)
chr5 (223-265)||(36430230-36430272)
chr5 (221-270)||(7452367-7452416)
chr5 (221-270)||(36424252-36424301)
chr5 (223-258)||(6154867-6154902)
[»] chr3 (46 HSPs)
chr3 (145-270)||(3034232-3034357)
chr3 (145-270)||(3693207-3693332)
chr3 (145-270)||(8888519-8888644)
chr3 (145-270)||(3673175-3673300)
chr3 (145-270)||(8070268-8070393)
chr3 (145-270)||(8883759-8883884)
chr3 (145-270)||(10585570-10585695)
chr3 (145-271)||(6595773-6595899)
chr3 (144-270)||(9706970-9707096)
chr3 (144-270)||(16749299-16749425)
chr3 (144-270)||(19776474-19776600)
chr3 (145-270)||(18350155-18350280)
chr3 (161-270)||(4106722-4106831)
chr3 (161-270)||(4110574-4110683)
chr3 (145-270)||(8223524-8223649)
chr3 (161-270)||(15965644-15965753)
chr3 (161-270)||(15969568-15969677)
chr3 (161-270)||(15973492-15973601)
chr3 (145-270)||(45903925-45904050)
chr3 (144-248)||(22758559-22758663)
chr3 (145-263)||(8197048-8197166)
chr3 (144-270)||(8488770-8488895)
chr3 (145-270)||(29817-29942)
chr3 (145-262)||(14425223-14425340)
chr3 (144-270)||(37438939-37439065)
chr3 (158-270)||(51922923-51923035)
chr3 (187-270)||(18699200-18699283)
chr3 (145-227)||(35456320-35456401)
chr3 (160-270)||(53358690-53358805)
chr3 (145-231)||(47540899-47540985)
chr3 (221-270)||(18467826-18467875)
chr3 (221-270)||(32473456-32473505)
chr3 (221-270)||(39775160-39775209)
chr3 (146-258)||(16055777-16055889)
chr3 (145-207)||(11997387-11997448)
chr3 (145-219)||(12899123-12899197)
chr3 (204-270)||(14671982-14672048)
chr3 (221-270)||(14438132-14438181)
chr3 (221-270)||(18472620-18472669)
chr3 (171-231)||(429057-429117)
chr3 (158-258)||(16043103-16043202)
chr3 (145-200)||(16023191-16023246)
chr3 (145-198)||(49020114-49020167)
chr3 (158-206)||(16048646-16048694)
chr3 (156-208)||(47540520-47540572)
chr3 (158-207)||(18011992-18012041)
[»] scaffold0182 (1 HSPs)
scaffold0182 (145-270)||(9260-9386)
[»] chr8 (24 HSPs)
chr8 (145-270)||(4237721-4237846)
chr8 (145-270)||(4242460-4242585)
chr8 (145-270)||(31449245-31449370)
chr8 (145-270)||(8330743-8330868)
chr8 (145-270)||(43302064-43302189)
chr8 (148-270)||(37772296-37772418)
chr8 (145-270)||(25367366-25367491)
chr8 (145-270)||(34818086-34818211)
chr8 (145-270)||(4582676-4582801)
chr8 (144-270)||(21384333-21384459)
chr8 (144-270)||(21387753-21387879)
chr8 (161-270)||(18861966-18862075)
chr8 (145-270)||(19393111-19393236)
chr8 (144-265)||(21411617-21411738)
chr8 (144-265)||(21806109-21806230)
chr8 (158-270)||(23915081-23915193)
chr8 (161-270)||(21827335-21827444)
chr8 (145-262)||(22104272-22104389)
chr8 (145-259)||(16066597-16066711)
chr8 (175-249)||(25733575-25733649)
chr8 (145-231)||(14036083-14036169)
chr8 (145-199)||(17153198-17153252)
chr8 (145-199)||(17157432-17157486)
chr8 (166-231)||(15197266-15197331)
[»] chr2 (24 HSPs)
chr2 (145-270)||(10160100-10160225)
chr2 (145-270)||(25375478-25375603)
chr2 (145-270)||(34070008-34070133)
chr2 (144-270)||(23068132-23068258)
chr2 (145-270)||(28855720-28855844)
chr2 (153-270)||(30658766-30658883)
chr2 (144-270)||(1284103-1284229)
chr2 (145-270)||(22844991-22845116)
chr2 (145-270)||(377670-377795)
chr2 (145-270)||(24292842-24292967)
chr2 (161-270)||(30344312-30344421)
chr2 (145-270)||(7559730-7559856)
chr2 (145-270)||(26897215-26897341)
chr2 (149-270)||(6297277-6297397)
chr2 (145-270)||(6856786-6856911)
chr2 (145-270)||(24286274-24286399)
chr2 (144-258)||(9785751-9785863)
chr2 (145-270)||(42248816-42248941)
chr2 (145-259)||(30635393-30635510)
chr2 (146-207)||(17327712-17327773)
chr2 (221-270)||(18345025-18345074)
chr2 (223-270)||(17968397-17968444)
chr2 (145-227)||(17452966-17453053)
chr2 (145-199)||(30641491-30641545)
[»] chr1 (32 HSPs)
chr1 (145-270)||(3094678-3094803)
chr1 (145-270)||(40232768-40232893)
chr1 (145-270)||(41097338-41097463)
chr1 (145-265)||(13893910-13894030)
chr1 (145-270)||(17213824-17213949)
chr1 (144-270)||(39243402-39243528)
chr1 (144-270)||(39246957-39247083)
chr1 (145-270)||(1067070-1067195)
chr1 (145-270)||(52100602-52100726)
chr1 (144-270)||(41387354-41387480)
chr1 (145-270)||(14804093-14804218)
chr1 (145-270)||(22428576-22428700)
chr1 (161-270)||(1924450-1924559)
chr1 (161-270)||(20923464-20923573)
chr1 (145-258)||(21498252-21498365)
chr1 (145-270)||(26198947-26199072)
chr1 (145-244)||(14819587-14819686)
chr1 (145-270)||(19725286-19725409)
chr1 (172-270)||(33055625-33055723)
chr1 (145-270)||(2367632-2367757)
chr1 (177-270)||(16836698-16836791)
chr1 (145-270)||(2384626-2384751)
chr1 (145-205)||(8267232-8267292)
chr1 (145-258)||(19726967-19727079)
chr1 (221-270)||(26927153-26927202)
chr1 (181-259)||(26319589-26319667)
chr1 (221-270)||(10135939-10135988)
chr1 (145-226)||(23285219-23285300)
chr1 (146-226)||(23254568-23254648)
chr1 (223-270)||(10140707-10140754)
chr1 (214-248)||(18784002-18784036)
chr1 (220-270)||(51040942-51040992)
[»] scaffold0060 (2 HSPs)
scaffold0060 (145-270)||(47353-47478)
scaffold0060 (145-270)||(52297-52422)
[»] chr4 (35 HSPs)
chr4 (145-270)||(3997442-3997567)
chr4 (145-270)||(13521365-13521491)
chr4 (145-262)||(7902491-7902608)
chr4 (145-270)||(34561013-34561138)
chr4 (145-270)||(15225754-15225879)
chr4 (145-270)||(47575251-47575375)
chr4 (150-247)||(31297880-31297977)
chr4 (144-270)||(15011195-15011321)
chr4 (144-270)||(12488387-12488513)
chr4 (145-270)||(41817371-41817509)
chr4 (145-270)||(14868448-14868573)
chr4 (145-270)||(14877361-14877486)
chr4 (145-270)||(14898996-14899121)
chr4 (144-270)||(10713529-10713655)
chr4 (144-270)||(10927299-10927425)
chr4 (145-270)||(9185064-9185189)
chr4 (161-270)||(14953451-14953560)
chr4 (145-270)||(9190929-9191054)
chr4 (161-270)||(25690583-25690692)
chr4 (145-265)||(8660783-8660903)
chr4 (145-270)||(26034777-26034902)
chr4 (162-270)||(39320151-39320259)
chr4 (204-270)||(18023210-18023276)
chr4 (221-270)||(5270856-5270905)
chr4 (221-270)||(5927650-5927699)
chr4 (145-226)||(26188048-26188129)
chr4 (162-225)||(52742621-52742684)
chr4 (158-227)||(43477410-43477477)
chr4 (163-207)||(32545535-32545579)
chr4 (223-270)||(30564184-30564231)
chr4 (227-270)||(31728803-31728846)
chr4 (156-231)||(55073774-55073849)
chr4 (221-270)||(8694327-8694376)
chr4 (221-270)||(31766485-31766534)
chr4 (222-270)||(24490309-24490357)
[»] scaffold0061 (1 HSPs)
scaffold0061 (145-270)||(49364-49489)
[»] scaffold0017 (1 HSPs)
scaffold0017 (145-270)||(149145-149270)
[»] chr6 (26 HSPs)
chr6 (145-270)||(6112139-6112264)
chr6 (144-270)||(15704290-15704416)
chr6 (158-260)||(24588571-24588673)
chr6 (145-270)||(16625005-16625130)
chr6 (144-270)||(19772391-19772517)
chr6 (144-270)||(27324440-27324564)
chr6 (144-270)||(22806940-22807066)
chr6 (144-265)||(2077406-2077527)
chr6 (144-270)||(16760971-16761098)
chr6 (144-247)||(31477083-31477186)
chr6 (161-270)||(22949821-22949930)
chr6 (161-270)||(22953777-22953886)
chr6 (161-270)||(23872265-23872374)
chr6 (161-270)||(23876221-23876330)
chr6 (158-270)||(14073724-14073836)
chr6 (148-270)||(26981184-26981306)
chr6 (145-270)||(27073574-27073699)
chr6 (145-227)||(15991075-15991157)
chr6 (145-270)||(18387521-18387646)
chr6 (221-270)||(17963991-17964040)
chr6 (145-231)||(2862852-2862938)
chr6 (145-207)||(2759756-2759818)
chr6 (158-231)||(15640938-15641011)
chr6 (144-200)||(14322789-14322845)
chr6 (226-265)||(5600745-5600784)
chr6 (223-270)||(11956474-11956521)
[»] scaffold0041 (1 HSPs)
scaffold0041 (145-270)||(35084-35209)
[»] scaffold0357 (1 HSPs)
scaffold0357 (145-270)||(3727-3852)
[»] scaffold0327 (1 HSPs)
scaffold0327 (145-270)||(19602-19727)
[»] scaffold0070 (2 HSPs)
scaffold0070 (145-270)||(59015-59140)
scaffold0070 (145-203)||(63284-63342)
[»] scaffold0020 (1 HSPs)
scaffold0020 (145-270)||(620-745)
[»] scaffold0011 (1 HSPs)
scaffold0011 (158-270)||(126992-127104)
[»] scaffold0572 (1 HSPs)
scaffold0572 (144-270)||(10355-10481)
[»] scaffold0452 (1 HSPs)
scaffold0452 (144-270)||(12347-12473)
[»] scaffold0431 (1 HSPs)
scaffold0431 (144-270)||(14856-14982)
[»] scaffold0018 (1 HSPs)
scaffold0018 (144-270)||(21896-22022)
[»] scaffold0205 (1 HSPs)
scaffold0205 (145-270)||(30856-30981)
[»] scaffold0132 (1 HSPs)
scaffold0132 (145-270)||(24676-24801)
[»] scaffold0019 (1 HSPs)
scaffold0019 (145-270)||(30273-30398)
[»] scaffold0015 (2 HSPs)
scaffold0015 (145-270)||(193647-193772)
scaffold0015 (145-270)||(187962-188086)
[»] scaffold0009 (1 HSPs)
scaffold0009 (145-249)||(71741-71846)
[»] scaffold0628 (1 HSPs)
scaffold0628 (144-270)||(6977-7103)
[»] scaffold0229 (1 HSPs)
scaffold0229 (144-270)||(10805-10931)
[»] scaffold0157 (1 HSPs)
scaffold0157 (144-270)||(31964-32090)
[»] scaffold0144 (1 HSPs)
scaffold0144 (144-258)||(7478-7592)
[»] scaffold0141 (1 HSPs)
scaffold0141 (144-270)||(13391-13517)
[»] scaffold0124 (1 HSPs)
scaffold0124 (144-270)||(21365-21491)
[»] scaffold0034 (1 HSPs)
scaffold0034 (144-270)||(121155-121281)
[»] scaffold0031 (1 HSPs)
scaffold0031 (144-270)||(35390-35516)
[»] scaffold1910 (1 HSPs)
scaffold1910 (145-270)||(455-580)
[»] scaffold0044 (2 HSPs)
scaffold0044 (145-270)||(81147-81272)
scaffold0044 (145-270)||(64749-64874)
[»] scaffold0575 (1 HSPs)
scaffold0575 (158-270)||(5274-5386)
[»] scaffold0415 (1 HSPs)
scaffold0415 (161-270)||(1077-1186)
[»] scaffold0292 (1 HSPs)
scaffold0292 (158-270)||(7756-7868)
[»] scaffold0004 (1 HSPs)
scaffold0004 (161-270)||(199781-199888)
[»] scaffold0008 (1 HSPs)
scaffold0008 (145-227)||(256444-256526)
[»] scaffold0155 (1 HSPs)
scaffold0155 (197-270)||(22264-22337)
[»] scaffold0096 (1 HSPs)
scaffold0096 (196-243)||(22325-22372)
[»] scaffold0478 (1 HSPs)
scaffold0478 (145-231)||(8215-8301)
[»] scaffold0932 (1 HSPs)
scaffold0932 (146-231)||(1020-1105)
[»] scaffold0232 (2 HSPs)
scaffold0232 (221-270)||(11783-11832)
scaffold0232 (165-226)||(22583-22644)
[»] scaffold0035 (1 HSPs)
scaffold0035 (158-202)||(6910-6954)
[»] scaffold0720 (1 HSPs)
scaffold0720 (145-199)||(5931-5985)
[»] scaffold0131 (1 HSPs)
scaffold0131 (147-231)||(8261-8344)


Alignment Details
Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 29403749 - 29403603
Alignment:
Q  1 ataatattaatgtagatattcctttgcttactttagatgcaaactcactttagaggtattttctatacagaaggtgagaagttaaaatgaagaccacggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  29403749 ataatattaatgtagatattcctttgcttactttagatgcaaactcactttagaggtattttttatacagaaggtgagaagttaaaatgaaggccacggt 29403650  T
Q  101 tgttggtgaaaacttccatggtatctctttcgctatacatctccatt 147  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||    
T  29403649 ttttggtgaaaacttccatggtatctctttctctatacatctccatt 29403603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 8076764 - 8076644
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8076764 attacttgctcccaaagtttctcacttattagatgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 8076665  T
Q  245 cttccagtgtttttcctctct 265  Q
    ||||  |||||||||||||||    
T  8076664 cttcatgtgtttttcctctct 8076644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 9650340 - 9650466
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  9650340 attacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatg 9650439  T
Q  245 cttccagtg-tttttcctctctgctcc 270  Q
    ||||| ||| |||||||||||| ||||    
T  9650440 cttcctgtgttttttcctctcttctcc 9650466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 27256951 - 27256826
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||    
T  27256951 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatg 27256852  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  27256851 cttcctgtgcttttcctctcttctcc 27256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 40864743 - 40864868
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||||||||||||||||||    
T  40864743 attacttgctcccaaagttactcacttattagttgtgaactttctctataaatagagagctcacacagtactttcgatacaccgaaattcacagttgatg 40864842  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  40864843 cttcctgtgcttttcctctcttctcc 40864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 16459760 - 16459886
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| || ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  16459760 cattacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 16459859  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  16459860 gcttcctgtgcttttcttctcttctcc 16459886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 20488663 - 20488537
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  20488663 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 20488564  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||  ||| ||||| ||||| ||||    
T  20488563 gcttcgtgtgcttttcttctcttctcc 20488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 20485288 - 20485176
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||  ||| |||    
T  20485288 aaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcgtgtgcttt 20485189  T
Q  258 tcctctctgctcc 270  Q
    || ||||| ||||    
T  20485188 tcttctcttctcc 20485176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 18426642 - 18426516
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  18426642 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 18426543  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  18426542 acttcctgtgcttttcttctcttctcc 18426516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 14928015 - 14928136
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||    
T  14928015 cattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgat 14928114  T
Q  244 gcttccagtgtttttcctctct 265  Q
    |||||| ||| ||||| |||||    
T  14928115 gcttcctgtgcttttcttctct 14928136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 15351481 - 15351602
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||    
T  15351481 cattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgat 15351580  T
Q  244 gcttccagtgtttttcctctct 265  Q
    |||||| ||| ||||| |||||    
T  15351581 gcttcctgtgcttttcttctct 15351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 19641013 - 19640888
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |  || | ||| | ||||||||||||||||||||||    
T  19641013 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagtgttcacattgttctttcgatacaccgaaattcacagttgatg 19640914  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  ||| ||||||||||| ||||    
T  19640913 cttcttgtgcttttcctctcttctcc 19640888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 8954647 - 8954750
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||  || ||||||||| |||||||||    
T  8954647 attacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattccgaaccccgaaattcccagttgatg 8954746  T
Q  245 cttc 248  Q
    ||||    
T  8954747 cttc 8954750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 14259721 - 14259595
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||   ||||||||||||||||    
T  14259721 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacactttgaaattcacagttgat 14259622  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  14259621 gcttcctgtgcttttcttctcttctcc 14259595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 45169310 - 45169436
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||    
T  45169310 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacaccgaaattcacagttgat 45169409  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  45169410 acttcctgtgcttttcttctcttctcc 45169436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 838812 - 838937
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||||   || ||||||||||| |||||||    
T  838812 attacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatg 838911  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| |||||||| |||||| ||||    
T  838912 cttcctgtgttttttctctcttctcc 838937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 1203992 - 1204117
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||||   || ||||||||||| |||||||    
T  1203992 attacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatg 1204091  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| |||||||| |||||| ||||    
T  1204092 cttcctgtgttttttctctcttctcc 1204117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 47102203 - 47102128
Alignment:
Q  195 aatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  47102203 aatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 47102128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 19096969 - 19096843
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccg-aaattcacagttgat 243  Q
    |||||||| ||  |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   || ||| |||||||||||||||    
T  19096969 attacttgttcgcaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaaattcacagttgat 19096870  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||  ||||||||||||||| ||||    
T  19096869 gcttcatgtgtttttcctctcttctcc 19096843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 845988 - 846113
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||| ||||||| | || ||||||||||  |||||||    
T  845988 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatg 846087  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| |||| |||||| ||||    
T  846088 cttcctgtgctttttctctcttctcc 846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 853365 - 853490
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||| ||||||| | || ||||||||||  |||||||    
T  853365 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatg 853464  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| |||| |||||| ||||    
T  853465 cttcctgtgctttttctctcttctcc 853490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 1211369 - 1211494
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||| ||||||| | || ||||||||||  |||||||    
T  1211369 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatg 1211468  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| |||| |||||| ||||    
T  1211469 cttcctgtgctttttctctcttctcc 1211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 36477671 - 36477577
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||       |||||||||||||||||||||||||||| |||||||    
T  36477671 aaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatg-------cacaccgaaattcacagttgatgcttcctgtgtttt 36477579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 32302554 - 32302428
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||| ||||||||||||||||||| |||| |||||||||||| ||| || | |  |||||||| |||||||||||||||||||||||    
T  32302554 cattacttgtttccaaaatttctcacttattagttgtaaactatctctataaatatagaactgacatggtgcattctacacaccgaaattcacagttgat 32302455  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    | |||| ||| ||||| ||||| ||||    
T  32302454 gtttcctgtgcttttcttctcttctcc 32302428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 29727211 - 29727304
Alignment:
Q  172 attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 265  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||   ||||| |||||||||||||||| |||| ||| |||||||||||    
T  29727211 attagttgtgaattttctctataaatagagagctcacacggtgcattctggacaccaaaattcacagttgatgtttcctgtgcttttcctctct 29727304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 9008871 - 9008789
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||| ||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||  | || ||||||||||||||    
T  9008871 attatttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgcattccacacacc 9008789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 16580943 - 16580818
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| | | |||||||||||||||||| |||| |||| || | |||||||| || |||| ||||||||||  ||||| ||||||||||||||||||    
T  16580943 attacttgtttccaaagtttctcacttattaattgtaaactatcccaataaatagggaactcacacagtgcattgtacacaacgaaattcacagttgatg 16580844  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  ||| ||||| ||||| ||||    
T  16580843 cttcatgtgcttttcttctcttctcc 16580818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 10499497 - 10499566
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||    |||||||||||||||||    
T  10499497 aaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10499566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 10504526 - 10504595
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||    |||||||||||||||||    
T  10504526 aaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10504595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 11017474 - 11017557
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttg 241  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||   |||| ||||| |  ||||||||||||||||||    
T  11017474 aaagtttctcacttattagttgtgaattttctatataaatagagaggtcgcgcagtacattctatccaccgaaattcacagttg 11017557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 10532226 - 10532295
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||  |||   |||||||||||||||||    
T  10532226 aaagtttctcacttattagttgtgaattttctctataagtagagaattcacgtagtgcattccacacacc 10532295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 26341870 - 26341821
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  26341870 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26341821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 15566089 - 15566012
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacac 224  Q
    |||||||| ||| |||||||||||| ||||||||||||  ||||| |||||||  |||||||||||||| ||||||||||    
T  15566089 attacttgttccaaaagtttctcacatattagttgtgagttttctatataaat--agagctcatacagttcattccacac 15566012  T

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Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 13343809 - 13343891
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||| ||| ||| |||||||||| ||||||||||||||| ||||||||||||||| || ||||   | |||||||||||||||    
T  13343809 attaattgttcccaaagtttctctcttattagttgtgaattttctctataaatagtgaactcaggtaatgcattccacacacc 13343891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 18385202 - 18385144
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagag 203  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||||||||    
T  18385202 attacttgttccaaaagtttctcacgtatcaattgtgaactttctctataaatagagag 18385144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 2629353 - 2629290
Alignment:
Q  162 tttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacaca 225  Q
    |||||||| |||||||||| || |||||||||||||| |||||||| | ||| |||||||||||    
T  2629353 tttctcacatattagttgtaaattttctctataaatatagagctcacatagttcattccacaca 2629290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 1043933 - 1043873
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagct 205  Q
    |||||||| | | |||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  1043933 attacttgtttccaaagtttctcacatattaattgtgaattttctctataaataaagagct 1043873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 11297467 - 11297413
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 199  Q
    |||||||| ||  |||||||||||| ||||||||||||  |||||||||||||||    
T  11297467 attacttgttcacaaagtttctcacatattagttgtgatttttctctataaatag 11297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 10488691 - 10488759
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 226  Q
    ||||||||||   ||||||||||||  ||| | |||||||| |||||||||| ||| ||||||||||||    
T  10488691 aaagtttctcctatattagttgtgatttttttttataaatatagagctcatatagttcattccacacac 10488759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 177
Target Start/End: Complemental strand, 47102243 - 47102211
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagt 177  Q
    |||||||||||| ||||||||||||||||||||    
T  47102243 attacttgctcccaaagtttctcacttattagt 47102211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 36936891 - 36937016
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36936891 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 36936990  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  36936991 cttcctgtgtttttcctctcttctcc 36937016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 36941645 - 36941770
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36941645 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccatacaccgaaattcacagttgatg 36941744  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  36941745 cttcctgtgtttttcctctcttctcc 36941770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 41997378 - 41997253
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41997378 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 41997279  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||| ||||| ||||    
T  41997278 cttcctgtgtttttcttctcttctcc 41997253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 42002147 - 42002022
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42002147 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 42002048  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||| ||||| ||||    
T  42002047 cttcctgtgtttttcttctcttctcc 42002022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 557404 - 557285
Alignment:
Q  151 tgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttcca 250  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  557404 tgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 557305  T
Q  251 gtgtttttcctctctgctcc 270  Q
    ||||||||||||||| ||||    
T  557304 gtgtttttcctctcttctcc 557285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 32460924 - 32461049
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  32460924 attacttgctcctaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacaatgcattccatacaccgaaattcacagttgatg 32461023  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  32461024 cttcctgtgtttttcctctcttctcc 32461049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 562176 - 562057
Alignment:
Q  151 tgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttcca 250  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  562176 tgctcccaaagtttcttacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 562077  T
Q  251 gtgtttttcctctctgctcc 270  Q
    ||||||||||||||| ||||    
T  562076 gtgtttttcctctcttctcc 562057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 13300870 - 13300995
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13300870 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 13300969  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  ||| ||||||||||| ||||    
T  13300970 cttcatgtgcttttcctctcttctcc 13300995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 31732251 - 31732126
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||    
T  31732251 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatg 31732152  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  31732151 cttcctgtgcttttcctctcttctcc 31732126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 21323356 - 21323481
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||    
T  21323356 attacttgcttccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgttttccatacaccgaaattcacagttgatg 21323455  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||  ||||||||||| ||||    
T  21323456 cttcctgtacttttcctctcttctcc 21323481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 23976967 - 23977070
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  23976967 attacttgctcccaaagtttctcacttattagtagtgaactttctctataaatagagagctcacacagtgcattccatacactgaaattcacagttgatg 23977066  T
Q  245 cttc 248  Q
    ||||    
T  23977067 cttc 23977070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 10754165 - 10754039
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10754165 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10754066  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  10754065 gcttcctgtgcttttcttctcttctcc 10754039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 12044510 - 12044640
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcata-----cagtgcattccacacaccgaaattcacagt 239  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||| ||| |||||||||| |     |||||||||||||||||||||||||| |||    
T  12044510 attacttgctcccaaagtttttcacttattagttgtgaattttctctagaaaaagagagctcacacacagcagtgcattccacacaccgaaattcaaagt 12044609  T
Q  240 tgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||| ||||||||||||||| ||||    
T  12044610 tgatgcttcctgtgtttttcctctcttctcc 12044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 21826937 - 21826812
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||    
T  21826937 attacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctacaccccgaaattcacagttgatg 21826838  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  21826837 attcctgtgcttttcctctcttctcc 21826812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 26869694 - 26869819
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  26869694 attacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatg 26869793  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  26869794 cttcctgtgcttttcctctcttctcc 26869819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 8770958 - 8770839
Alignment:
Q  145 attacttgctcctaaagtttctcactt-attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||||| ||| |||||||   |||| ||||||||||||||||    
T  8770958 attacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacactgaaattcacagttgat 8770859  T
Q  244 gcttccagtgtttttcctct 263  Q
    |||||| |||||||||||||    
T  8770858 gcttcctgtgtttttcctct 8770839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 3666627 - 3666504
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||| ||||||||||||||||  ||||||    
T  3666627 attacttgttctcaaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggcattctacacaccgaaattcac--ttgatg 3666530  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  |||||||| |||||| ||||    
T  3666529 cttcttgtgttttttctctcttctcc 3666504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 36949499 - 36949374
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  36949499 attacttgttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtgcattcaacacaccgaaaatcacaattgatg 36949400  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| |||  |||||| ||||    
T  36949399 tttcctgtgctttagctctcttctcc 36949374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 270
Target Start/End: Original strand, 24435564 - 24435688
Alignment:
Q  146 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgc 245  Q
    ||||||| ||||||||| | |||||||||||| | ||||||||||||||||||||||||||  |||||||||||  ||||||||| | |||||| ||||     
T  24435564 ttacttgttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcacagtgcattcttcacaccgaattccacagtcgatga 24435663  T
Q  246 ttccagtgtttttcctctctgctcc 270  Q
    |||| ||||  ||||||||| ||||    
T  24435664 ttcctgtgtgattcctctcttctcc 24435688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 15395233 - 15395282
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctca 207  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  15395233 aaagttactcacttattagttgtgaattttctctataaatagagagctca 15395282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 26667941 - 26667892
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  26667941 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26667892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 26939538 - 26939489
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  26939538 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26939489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 29167405 - 29167454
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  29167405 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 29167454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 41099244 - 41099170
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattc 219  Q
    |||||||| ||| ||||||| |||| ||||||||| ||| ||||||||||||||||| ||||| ||| |||||||    
T  41099244 attacttgttcccaaagtttatcacctattagttgggaagtttctctataaatagagggctcacacaatgcattc 41099170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 36430272 - 36430230
Alignment:
Q  223 acaccgaaattcacagttgatgcttccagtgtttttcctctct 265  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  36430272 acaccgaaattcatagttgatgcttcctgtgtttttcctctct 36430230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 7452416 - 7452367
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||| ||||    
T  7452416 acacgccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 7452367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 36424301 - 36424252
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||||||||| || | ||||||||||||||| ||||    
T  36424301 acacaccgaaattcacagttgatgttttctgtgtttttcctctcttctcc 36424252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 258
Target Start/End: Original strand, 6154867 - 6154902
Alignment:
Q  223 acaccgaaattcacagttgatgcttccagtgttttt 258  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6154867 acaccgaaattcacagttgatgcttcctgtgttttt 6154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 3034357 - 3034232
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3034357 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 3034258  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  3034257 cttcctgtgtttttcctctcttctcc 3034232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 3693332 - 3693207
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3693332 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 3693233  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  3693232 cttcctgtgtttttcctctcttctcc 3693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 8888644 - 8888519
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8888644 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 8888545  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  8888544 cttcctgtgtttttcctctcttctcc 8888519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 3673300 - 3673175
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  3673300 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacactgaaattcacagttgatg 3673201  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  3673200 cttcctgtgtttttcctctcttctcc 3673175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 8070393 - 8070268
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8070393 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccagacaccgaaattcacagttgatg 8070294  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| || |||||||||||| ||||    
T  8070293 cttcctgtatttttcctctcttctcc 8070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 8883884 - 8883759
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||    
T  8883884 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaataaagagcttacacagtgcattccacacaccgaaattcacagttgatg 8883785  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  8883784 cttcctgtgtttttcctctcttctcc 8883759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 10585570 - 10585695
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||| ||||||||||||||||    
T  10585570 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccaaaattcacagttgatg 10585669  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  10585670 cttcctgtgtttttcctctcttctcc 10585695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 6595773 - 6595899
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||  ||||| | ||||||| ||||||||    
T  6595773 attacttgttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtgcattttacacatcaaaattcatagttgatg 6595872  T
Q  245 cttccagtgtttttcctctctgctcct 271  Q
    ||||| ||||||||||||||| |||||    
T  6595873 cttcctgtgtttttcctctcttctcct 6595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 9706970 - 9707096
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  9706970 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 9707069  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  9707070 gcttcctgtgcttttcttctcttctcc 9707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 16749299 - 16749425
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  16749299 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 16749398  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  16749399 gcttcctgtgcttttcttctcttctcc 16749425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 19776600 - 19776474
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  19776600 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 19776501  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  19776500 gcttcctgtgcttttcttctcttctcc 19776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 18350155 - 18350280
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  18350155 attacttgttcccaaagtttctcacctattagttgcgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 18350254  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||| ||||| ||||    
T  18350255 cttcctgtgtttttcttctcttctcc 18350280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 4106722 - 4106831
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  4106722 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 4106821  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  4106822 tctcttctcc 4106831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 4110574 - 4110683
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  4110574 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 4110673  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  4110674 tctcttctcc 4110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 8223649 - 8223524
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  8223649 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggaccccgaaattcacagttgatg 8223550  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  8223549 cttcctgtgcttttcctctcttctcc 8223524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 15965753 - 15965644
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  15965753 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15965654  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  15965653 tctcttctcc 15965644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 15969677 - 15969568
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  15969677 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15969578  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  15969577 tctcttctcc 15969568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 15973601 - 15973492
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  15973601 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15973502  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  15973501 tctcttctcc 15973492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 45903925 - 45904050
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |  |||| ||| | |||||||||||||||||| |||    
T  45903925 attacttgctcctaaagtttctcacttattactttggaactttctctataaatagagagctcacaatgtgctttcaatacaccgaaattcacagttaatg 45904024  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  45904025 tttcctgtgcttttcctctcttctcc 45904050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 22758559 - 22758663
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||| ||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  22758559 cattacttgtttccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 22758658  T
Q  244 gcttc 248  Q
    |||||    
T  22758659 gcttc 22758663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 8197166 - 8197048
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||    || |||||||||||||||||||    
T  8197166 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattatggaccccgaaattcacagttgatg 8197067  T
Q  245 cttccagtgtttttcctct 263  Q
    ||||| ||| |||||||||    
T  8197066 cttcctgtgcttttcctct 8197048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 8488770 - 8488895
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||| ||||| ||||||||||| | |||||||||    
T  8488770 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagt-cattctacacaccgaaagttacagttgat 8488868  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  8488869 gcttcctgtgcttttcttctcttctcc 8488895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 29942 - 29817
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||| ||||||||||||| ||||| ||| |||||||   |||||||||||||||| |||||    
T  29942 attacttgttcccaaagtttctcacctattagttgtgaaatttttctataaatagagggctcacacaatgcattcaggacaccgaaattcacagatgatg 29843  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  29842 attcctgtgcttttcctctcttctcc 29817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 14425223 - 14425340
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| |||||| |||||| |||||||| |||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  14425223 attacttgttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatg 14425322  T
Q  245 cttccagtgtttttcctc 262  Q
     |||| ||| ||||||||    
T  14425323 attcctgtgcttttcctc 14425340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 37438939 - 37439065
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||| ||||| |||| ||||||||||||||||||    
T  37438939 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacgccgaaattcacagttgat 37439038  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||  ||| ||||| ||||| ||||    
T  37439039 acttcatgtgcttttcttctcttctcc 37439065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 51923035 - 51922923
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   |||||||||||||||||||||| |||| |||  ||    
T  51923035 aaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggacaccgaaattcacagttgatgattcccgtgcctt 51922936  T
Q  258 tcctctctgctcc 270  Q
    || ||||| ||||    
T  51922935 tcttctcttctcc 51922923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 18699200 - 18699283
Alignment:
Q  187 tctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||| ||| ||||| ||||| ||||    
T  18699200 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacacttgatgcttcctgtgcttttcttctcttctcc 18699283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 35456320 - 35456401
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||  ||| | |||||||||||||||||    
T  35456320 attacttgttcccaaagtttctc-cttattagttgtgaattttctctataaatagagaattcacatagtgcattccacacacc 35456401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 53358805 - 53358690
Alignment:
Q  160 agtttctcacttattagttgtgaactttctctataaatagagagct--catacagtgcattccacacaccgaaat--tcacagttgatgcttccagtg-t 254  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||  || ||| ||||||| |||||||| |||  ||| ||||||||||||  ||| |    
T  53358805 agtttttcacttattagttgtgaactttctttataaatagagagctcacacacaatgcattctacacaccgtaattgtcatagttgatgcttcatgtgtt 53358706  T
Q  255 ttttcctctctgctcc 270  Q
    ||||||||||| ||||    
T  53358705 ttttcctctcttctcc 53358690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 47540899 - 47540985
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||| || ||| | ||| ||||| ||||| |||||    
T  47540899 attacttgttcccaaagtttctcacatattagttgtgaattttctctataaatagaaagttcacatagttcattctacacatcgaaa 47540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 18467875 - 18467826
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  18467875 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 18467826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 32473456 - 32473505
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  32473456 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 32473505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 39775160 - 39775209
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  39775160 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 39775209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 16055889 - 16055777
Alignment:
Q  146 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgc 245  Q
    ||||||| ||||||||||| |||||||||||| | ||||||||||||||||| ||| ||||  | | ||||||   ||| ||||||  ||||||||||||    
T  16055889 ttacttgttcctaaagtttttcacttattagtagagaactttctctataaatggagggctctcaaaatgcatttttcacgccgaaaaacacagttgatgc 16055790  T
Q  246 ttccagtgttttt 258  Q
    |||| ||| ||||    
T  16055789 ttcctgtgctttt 16055777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 11997387 - 11997448
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctca 207  Q
    |||||||| ||| ||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  11997387 attacttgttcccaaagtttctcaat-attagttgtgaattttctctataaatagagagctca 11997448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 12899123 - 12899197
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattc 219  Q
    |||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||  ||| ||| | |||||||||    
T  12899123 attacttgttcccaaagtttctcacttattagctgtgaattttctctataaataatgagatcacatagtgcattc 12899197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 14672048 - 14671982
Alignment:
Q  204 ctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| ||||| ||||    
T  14672048 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 14671982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 14438132 - 14438181
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  14438132 acacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 14438181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 18472669 - 18472620
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  18472669 acacaccgaaattcacagttaatgcttcctgtgtttttcctctcttctcc 18472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 429117 - 429057
Alignment:
Q  171 tattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    ||||| ||||||| |||||||||||||| |||||||| | ||| |||||||||||||||||    
T  429117 tattacttgtgaattttctctataaataaagagctcacaaagttcattccacacaccgaaa 429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 16043202 - 16043103
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    ||||||| |||||||||||| | ||||||||||||||||||||| ||||  | | |||||||  ||||||||||   ||||||||||||||| ||| |||    
T  16043202 aaagtttttcacttattagtagagaactttctctataaatagagggctctcaaaatgcattcttcacaccgaaa-aaacagttgatgcttcctgtgattt 16043104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 16023246 - 16023191
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaataga 200  Q
    |||||||| ||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  16023246 attacttgttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 49020167 - 49020114
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaata 198  Q
    |||||||| ||| ||| ||| |||||||||||||||||| ||||||||||||||    
T  49020167 attacttgttcccaaaatttatcacttattagttgtgaattttctctataaata 49020114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 16048694 - 16048646
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctc 206  Q
    ||||||| |||||||||||| | ||||||||||||||||||||| ||||    
T  16048694 aaagtttttcacttattagtagagaactttctctataaatagagggctc 16048646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 47540520 - 47540572
Alignment:
Q  156 ctaaagtttctcacttattagttgtgaactttctctataaatagagagctcat 208  Q
    |||||||||||||| ||||||||||||| |||||||| ||||| || ||||||    
T  47540520 ctaaagtttctcacatattagttgtgaattttctctaaaaataaagggctcat 47540572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 18012041 - 18011992
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctca 207  Q
    ||||||| |||| ||||||||||||| |||||||||||||| | ||||||    
T  18012041 aaagtttatcacatattagttgtgaattttctctataaataaatagctca 18011992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 9260 - 9386
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9260 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 9359  T
Q  245 cttccagtg-tttttcctctctgctcc 270  Q
    ||||| ||| |||||||||||| ||||    
T  9360 cttcctgtgttttttcctctcttctcc 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 4e-53; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 4237721 - 4237846
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  4237721 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatg 4237820  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  4237821 cttcctgtgtttttcctctcttctcc 4237846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 4242460 - 4242585
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  4242460 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatg 4242559  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  4242560 cttcctgtgtttttcctctcttctcc 4242585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 31449245 - 31449370
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31449245 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 31449344  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||| | ||||||||||||||| ||||    
T  31449345 ctttctgtgtttttcctctcttctcc 31449370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 8330743 - 8330868
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  8330743 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccatacaccgaaattcacagttgatg 8330842  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  8330843 cttcctgtgcttttcctctcttctcc 8330868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 43302064 - 43302189
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  43302064 attacttgctcccaaagtttctcacttattacttgtgaactttctctataaatagagagctcacacagtgcattccacacatcgaaattcacagttgatg 43302163  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    |||||  |||||||||||||| ||||    
T  43302164 cttcctatgtttttcctctcttctcc 43302189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 37772418 - 37772296
Alignment:
Q  148 acttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgctt 247  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||||    
T  37772418 acttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgctt 37772319  T
Q  248 ccagtgtttttcctctctgctcc 270  Q
    || ||||||||||||||| ||||    
T  37772318 cctgtgtttttcctctcttctcc 37772296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 25367366 - 25367491
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||||| ||||||    
T  25367366 attacttgatcccaaagtttctcacttactagttgtgaactttctctataaatagagagttcacacagtgctttccatacaccgaaattcacaattgatg 25367465  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  ||||||||||||||| ||||    
T  25367466 cttcatgtgtttttcctctcttctcc 25367491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 34818086 - 34818211
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||   ||||||||||||||||||||||    
T  34818086 attacttgctccgaaagtttctcagttattagttgtgaactttctctataaatagagagttcacacagtgctttcggtacaccgaaattcacagttgatg 34818185  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  34818186 cttcctgtgcttttcctctcttctcc 34818211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 4582676 - 4582801
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  4582676 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 4582775  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||| ||||| ||||    
T  4582776 cttcctgtgtttttcttctctcctcc 4582801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 21384459 - 21384333
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  21384459 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgat 21384360  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  21384359 gcttcctgtgcttttcttctcttctcc 21384333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 21387879 - 21387753
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  21387879 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgat 21387780  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  21387779 gcttcctgtgcttttcttctcttctcc 21387753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 18861966 - 18862075
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  18861966 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 18862065  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  18862066 tctcttctcc 18862075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 19393111 - 19393236
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||    || |||||||||||||||||||    
T  19393111 attacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcacacaatgcattatggaccccgaaattcacagttgatg 19393210  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  19393211 cttcctgtgcttttcttctcttctcc 19393236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 21411738 - 21411617
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||  | ||||||||| |||||||||||||||||||||||    
T  21411738 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgat 21411639  T
Q  244 gcttccagtgtttttcctctct 265  Q
    |||||  ||| ||||| |||||    
T  21411638 gcttcatgtgcttttcttctct 21411617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 21806230 - 21806109
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||  | ||||||||| |||||||||||||||||||||||    
T  21806230 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgat 21806131  T
Q  244 gcttccagtgtttttcctctct 265  Q
    |||||  ||| ||||| |||||    
T  21806130 gcttcatgtgcttttcttctct 21806109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 23915193 - 23915081
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    ||||||||||| ||||||||||| |||| || ||||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||    
T  23915193 aaagtttctcatttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgcttt 23915094  T
Q  258 tcctctctgctcc 270  Q
    || ||||| ||||    
T  23915093 tcttctcttctcc 23915081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 21827335 - 21827444
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| ||   |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  21827335 gtttctcacttattagttgtaaatgatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 21827434  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  21827435 tctcttctcc 21827444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 262
Target Start/End: Complemental strand, 22104389 - 22104272
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||| ||||||    
T  22104389 attacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacatttgatg 22104290  T
Q  245 cttccagtgtttttcctc 262  Q
     |||| ||| ||||||||    
T  22104289 attcctgtgcttttcctc 22104272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 16066597 - 16066711
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||||  || |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||| |    ||||||||||||||||||||||    
T  16066597 attacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcactatggacaccgaaattcacagttgatg 16066696  T
Q  245 cttccagtgtttttc 259  Q
    ||||| || ||||||    
T  16066697 cttcctgtatttttc 16066711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 25733575 - 25733649
Alignment:
Q  175 agttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttcc 249  Q
    |||||| |||| || ||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||    
T  25733575 agttgtaaactatccctataaatagagaactcacaaagtgcattctacacaccgaaattcacagttgatgcttcc 25733649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 14036169 - 14036083
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||||| | ||| |||||||||||| ||||| | ||||| ||| ||||||||||||||||||| | | | |||||||||||||||||    
T  14036169 attactcgttcccaaagtttctcacatattaatcgtgaattttttctataaatagagagctcacaaaattcattccacacaccgaaa 14036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 17153252 - 17153198
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 199  Q
    |||||||| ||| |||||||||||| ||||||||||||  |||||||||||||||    
T  17153252 attacttgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 17157432 - 17157486
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 199  Q
    ||||| || ||| |||||||||||| ||||||||||||  |||||||||||||||    
T  17157432 attacgtgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17157486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 15197331 - 15197266
Alignment:
Q  166 tcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||| ||||||||||||| || | |||||||||||||| ||| | ||| |||||||| ||||||||    
T  15197331 tcacatattagttgtgaatttacactataaatagagagttcagatagttcattccacgcaccgaaa 15197266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 10160100 - 10160225
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10160100 attacttactcccaaagtttctcacttattagttgtgaactttctctacaaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 10160199  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  10160200 cttcctgtgtttttcctctcttctcc 10160225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 25375603 - 25375478
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||||    
T  25375603 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacagtgcattctacacactgaaattcacagttgatg 25375504  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||  ||||||||||| ||||    
T  25375503 attccggtacttttcctctcttctcc 25375478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 34070133 - 34070008
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  34070133 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 34070034  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||||||| ||||| ||||| ||||    
T  34070033 cttccagtgcttttcttctctcctcc 34070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 23068132 - 23068258
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | |||||||||| |||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  23068132 cattacttgtttccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 23068231  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  23068232 gcttcctgtgcttttcttctcttctcc 23068258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 28855844 - 28855720
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||| | ||||||||||| |||||||||||||| |||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  28855844 attacttgcttccaaagtttctcatttattagttgtgaa-tttccctataaatagagagctcacaaagtgcattcgacacaccgaaattcacagttgatg 28855746  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     ||||  |||||||||||||| ||||    
T  28855745 attcctatgtttttcctctcttctcc 28855720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 30658883 - 30658766
Alignment:
Q  153 ctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagt 252  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||   |    
T  30658883 ctcccaaagtttctcacttattagttgtgaactttctccataaatagagagctcacacagtgcattccacatacacaaattcacagttgatgcttcatat 30658784  T
Q  253 gtttttcctctctgctcc 270  Q
    |||| |||||||| ||||    
T  30658783 gtttgtcctctcttctcc 30658766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 1284229 - 1284103
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  1284229 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1284130  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  1284129 acttcctgtgcttttcttctcttctcc 1284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 22845116 - 22844991
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| |  ||| | ||||||||||| ||||||    
T  22845116 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacatagtgcaatgtacagaacgaaattcacaattgatg 22845017  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  ||||||||||||||| ||||    
T  22845016 cttcttgtgtttttcctctcttctcc 22844991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 377670 - 377795
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||||  ||||||||||||||| | ||||||||||| ||| ||||||||||||||||||| | | |||||| |  ||||||||||||||||||||||    
T  377670 attacttgtccctaaagtttctcaccttttagttgtgaagtttttctataaatagagagctcacataatgcattacggacaccgaaattcacagttgatg 377769  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||| ||||| ||||    
T  377770 cttcctgtgtttttcttctcttctcc 377795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 24292842 - 24292967
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| | ||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  24292842 attacttgttcccaaagtttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatg 24292941  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  24292942 cttcctgtgcttttcctctcttctcc 24292967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 30344312 - 30344421
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  30344312 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 30344411  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  30344412 tctcttctcc 30344421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 7559730 - 7559856
Alignment:
Q  145 attacttgctcctaaagtttctcactt-attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||||| ||| |||||||   ||||  |||||||||||||||    
T  7559730 attacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacacttaaattcacagttgat 7559829  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| |||||||| |||||| ||||    
T  7559830 gcttcctgtgttttttctctcttctcc 7559856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 26897341 - 26897215
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  26897341 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggactccgaaattcacagttgatg 26897242  T
Q  245 cttccagtg-tttttcctctctgctcc 270  Q
    ||||| ||| ||||| |||||| ||||    
T  26897241 cttcctgtgctttttgctctcttctcc 26897215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 149 - 270
Target Start/End: Original strand, 6297277 - 6297397
Alignment:
Q  149 cttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttc 248  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||| | ||| | |||| |||||||||||||||||||||    
T  6297277 cttgctcccaaagtttatcacttattagttgtcaactttctcta-aaatagagagctcacacagttctttctatacacagaaattcacagttgatgcttc 6297375  T
Q  249 cagtgtttttcctctctgctcc 270  Q
      ||| ||||||||||| ||||    
T  6297376 atgtgcttttcctctcttctcc 6297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 6856911 - 6856786
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| | |||||     ||||||||||||||||||||    
T  6856911 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatacattctggggaccgaaattcacagttgatg 6856812  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  6856811 cttcctgtgcttttcttctcttctcc 6856786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 24286274 - 24286399
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||| ||||||| | ||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  24286274 attacttgttcccaaagcttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatg 24286373  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  24286374 cttcctgtgcttttcctctcttctcc 24286399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 9785863 - 9785751
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| || ||||||||||||| |||  ||||||||||  |||||||||||||||||||||||    
T  9785863 cattacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactc--acagtgcattttacacaccgaaattcacagttgat 9785766  T
Q  244 gcttccagtgttttt 258  Q
    |||||| ||| ||||    
T  9785765 gcttcctgtgctttt 9785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 42248941 - 42248816
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| | | |||||||||||| ||||||||  ||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||| ||||||    
T  42248941 attacttgtttccaaagtttctcacctattagttcggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacaattgatg 42248842  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  42248841 cttcctgtgcttttcttctcttctcc 42248816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 30635510 - 30635393
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaata--gagagctcatacagtgcattccacacaccg-aaattcacagttg 241  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||| ||||||||   |||||||| | ||||||||  |||||||| |||||||||||||    
T  30635510 attacttgttccccaagtttctcacttattagttgtgaattttctttataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttg 30635411  T
Q  242 atgcttccagtgtttttc 259  Q
    |||||||| ||| |||||    
T  30635410 atgcttcctgtgcttttc 30635393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 17327773 - 17327712
Alignment:
Q  146 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctca 207  Q
    ||||||| ||| ||| ||||||||||||||||||| || |||||||||||||||||||||||    
T  17327773 ttacttgttcccaaaatttctcacttattagttgtaaattttctctataaatagagagctca 17327712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 18345074 - 18345025
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  18345074 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 18345025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 17968397 - 17968444
Alignment:
Q  223 acaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  17968397 acaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 17968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 17452966 - 17453053
Alignment:
Q  145 attacttgctcctaaagtttctcacttattag-----ttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||||||| ||| |||||||||||||||||||     |||| || |||||||||||||||||| |||| | ||| |||||||||||||    
T  17452966 attacttgttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctcacatagtacattccacacacc 17453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 30641491 - 30641545
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 199  Q
    |||||||| ||| |||||||||||| ||||||||| ||  |||||||||||||||    
T  30641491 attacttgttccaaaagtttctcacatattagttgagatttttctctataaatag 30641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 3094803 - 3094678
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||     
T  3094803 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagttcacacagtgcattccacacaccgaaattcacagttgata 3094704  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  3094703 cttcctgtgtttttcctctcttctcc 3094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 40232768 - 40232893
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40232768 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 40232867  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||  ||||||||||| ||||    
T  40232868 cttcctgtacttttcctctcttctcc 40232893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 41097338 - 41097463
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  41097338 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 41097437  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  ||| ||||||||||| ||||    
T  41097438 cttcatgtgcttttcctctcttctcc 41097463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 13894030 - 13893910
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||||| |||||| |||| ||||||||||||    
T  13894030 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagttcacacaatgcattctacacactgaaaatcacagttgatg 13893931  T
Q  245 cttccagtgtttttcctctct 265  Q
    ||||| |||||||||||||||    
T  13893930 cttcctgtgtttttcctctct 13893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 17213824 - 17213949
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||| | ||||||||    
T  17213824 attacttgttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtacattcgatacaccgaaatttatagttgatg 17213923  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     ||||  |||||||||||||| ||||    
T  17213924 tttcctatgtttttcctctcttctcc 17213949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 39243402 - 39243528
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  39243402 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 39243501  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  39243502 gcttcctgtgcttttcttctcttctcc 39243528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 39246957 - 39247083
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  39246957 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 39247056  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  39247057 gcttcctgtgcttttcttctcttctcc 39247083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 1067195 - 1067070
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||    ||| ||||||||||||||||||    
T  1067195 attacgtgttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcacacattgcattatggacaacgaaattcacagttgatg 1067096  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  1067095 cttcctgtgtttttcctctcttctcc 1067070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 52100602 - 52100726
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||  |||||||||||    
T  52100602 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcatacaatgcattcaacacaccgaaa-acacagttgatg 52100700  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||||||||||||||| ||||    
T  52100701 attcctgtgtttttcctctcttctcc 52100726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 41387354 - 41387480
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  41387354 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 41387453  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    || ||  ||||||||| ||||| ||||    
T  41387454 gcatcatgtgtttttcttctcttctcc 41387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 14804218 - 14804093
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||  || ||||||| | || |||||||||||||||||||    
T  14804218 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagaccccgaaattcacagttgatg 14804119  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  14804118 attcctgtgcttttcctctcttctcc 14804093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 22428576 - 22428700
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  22428576 attacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggac-ccgaaattcacagttgatg 22428674  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  22428675 attcctgtgcttttcctctcttctcc 22428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 1924450 - 1924559
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  1924450 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 1924549  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  1924550 tctcttctcc 1924559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 20923464 - 20923573
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  20923464 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 20923563  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  20923564 tctcttctcc 20923573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 258
Target Start/End: Complemental strand, 21498365 - 21498252
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  21498365 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 21498266  T
Q  245 cttccagtgttttt 258  Q
    ||||| ||| ||||    
T  21498265 cttcctgtgctttt 21498252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 26199072 - 26198947
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| ||||||| |||| | |||| |||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  26199072 attacttgttcccaaagtttttcaccttttagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatg 26198973  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  26198972 cttcctgtgcttttcctctcttctcc 26198947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 14819686 - 14819587
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||| | || |||||||||||||||||||    
T  14819686 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctagaccccgaaattcacagttgatg 14819587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 19725286 - 19725409
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||| ||| ||| |||||||    |||||||||||||||||||||    
T  19725286 attacttgctcccaaagtttctcatttattagttgtga--tttctctataaatagagagttcacacattgcattctgggcaccgaaattcacagttgatg 19725383  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| |||||| |||| ||||    
T  19725384 cttcctgtgcttttcccctcttctcc 19725409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 33055723 - 33055625
Alignment:
Q  172 attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||| |||||||||||||||| |||  ||||||||| ||||| ||||    
T  33055723 attagttgtgaactttctctataaatagagagttcacacagtgcattctatacaccaaaattcacagttgatgattcttgtgtttttcttctcttctcc 33055625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 2367757 - 2367632
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| |||||| ||| ||  |||||||||||||||||||||| ||| |||||||   |||| |||||||||||||||||    
T  2367757 attacttgttcccaaagtttctcacctattagctgtaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatg 2367658  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  2367657 cttcctgtgcttttcttctcttctcc 2367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 16836698 - 16836791
Alignment:
Q  177 ttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||| ||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  16836698 ttgtgaattttctctataaatagagagctcacacagtgcattctggacaccgaaattcacagttgatgcttcatgtgcttttcctctcttctcc 16836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 2384626 - 2384751
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| |||||| | | ||  |||||||||||||||||||||| ||| |||||||   |||| |||||||||||||||||    
T  2384626 attacttgttcccaaagtttctcacctattagctctaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatg 2384725  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  2384726 cttcctgtgcttttcttctcttctcc 2384751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 8267232 - 8267292
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagct 205  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8267232 attacttgctcacaaagtttatcacttattagttgtgaactttctctataaatagagagct 8267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 258
Target Start/End: Complemental strand, 19727079 - 19726967
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||  ||| ||||||| ||||||||||||   |||||| |||||||||||||||| |||  ||||||   | ||||||||||||||||||||    
T  19727079 attacttgctctcaaaatttctcatttattagttgtgtgatttctcgataaatagagagctcacaca-agcattctggataccgaaattcacagttgatg 19726981  T
Q  245 cttccagtgttttt 258  Q
    ||||| || |||||    
T  19726980 cttcctgtattttt 19726967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 26927153 - 26927202
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  26927153 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26927202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 26319589 - 26319667
Alignment:
Q  181 gaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttc 259  Q
    |||||||||||||||||| |||||||| ||| |||||||  |||||| |||  |||||||||||||||| ||| |||||    
T  26319589 gaactttctctataaataaagagctcacacaatgcattcttcacaccaaaaaacacagttgatgcttcctgtgattttc 26319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 10135988 - 10135939
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  10135988 acacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 10135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 23285219 - 23285300
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 226  Q
    |||||||| ||| |||| ||||||| ||||| ||||||| |||||||||||||||| ||| || | | ||||||| ||||||    
T  23285219 attacttgttcccaaaggttctcacatattaattgtgaattttctctataaatagatagcccacaaattgcattctacacac 23285300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 23254568 - 23254648
Alignment:
Q  146 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 226  Q
    ||||||| | ||||| |||||||| ||||| || | || |||||||||||||||||||| || | ||||||||| ||||||    
T  23254568 ttacttgtttctaaaatttctcacatattaattataaattttctctataaatagagagcacacaaagtgcattctacacac 23254648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 10140754 - 10140707
Alignment:
Q  223 acaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  10140754 acaccgaaattcacagttgatgcttcatgtgtttttcttctcttctcc 10140707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 18784002 - 18784036
Alignment:
Q  214 gcattccacacaccgaaattcacagttgatgcttc 248  Q
    |||||| ||||||||||||||||||||||||||||    
T  18784002 gcattctacacaccgaaattcacagttgatgcttc 18784036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 51040942 - 51040992
Alignment:
Q  220 cacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||| |||||||||||||||||| || | ||||||||||||||| ||||    
T  51040942 cacacatcgaaattcacagttgatgttttctgtgtttttcctctcttctcc 51040992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 47353 - 47478
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||    
T  47353 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatg 47452  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  47453 cttcctgtgcttttcctctcttctcc 47478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 52297 - 52422
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||    
T  52297 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatg 52396  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  52397 cttcctgtgcttttcctctcttctcc 52422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 3997442 - 3997567
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| || |||||||||||||||||||||||||    
T  3997442 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatattgctttacacacaccgaaattcacagttgatg 3997541  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  3997542 cttcctgtgtttttcctctcttctcc 3997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 13521365 - 13521491
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  13521365 attacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatg 13521464  T
Q  245 cttccagtg-tttttcctctctgctcc 270  Q
    ||||| ||| |||||||||||| ||||    
T  13521465 cttcctgtgttttttcctctcttctcc 13521491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 7902491 - 7902608
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||| ||||||    
T  7902491 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacacacaccgaaattcacatttgatg 7902590  T
Q  245 cttccagtgtttttcctc 262  Q
    ||||| ||| ||||||||    
T  7902591 cttcctgtgcttttcctc 7902608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 34561138 - 34561013
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||    
T  34561138 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatg 34561039  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  34561038 cttcctgtgcttttcctctcttctcc 34561013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 15225879 - 15225754
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  15225879 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattctacacaccgaaattcacagttgatg 15225780  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  15225779 cttcctgtgcttttcttctcttctcc 15225754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 47575375 - 47575251
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  47575375 attacttgctcc-atagtttctcacttattagttgtgaattttctctataaaaagagagctcacacagtgcattccacacaccgaaattcaaagttgatg 47575277  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    |  || ||||||||||||||| ||||    
T  47575276 caacctgtgtttttcctctcttctcc 47575251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 31297880 - 31297977
Alignment:
Q  150 ttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgctt 247  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  31297880 ttgctcccaaagtttctcacttattagttgtgaactctctctataaatagagagctcacacagtgcattccatacaccgaaattcacaattgatgctt 31297977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 15011195 - 15011321
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  15011195 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgat 15011294  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  15011295 gcttcctgtgcttttcttctcttctcc 15011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 12488513 - 12488387
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  12488513 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 12488414  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  12488413 acttcctgtgcttttcttctcttctcc 12488387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 41817509 - 41817371
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctcta-------------taaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||| ||||||||||| |||||||||||    
T  41817509 attacttgctcccaaagtttctcacttattagttgtgaactttctctagagagcttctctgtaaatagagagctcacacagtgcattctacacaccgaaa 41817410  T
Q  232 ttcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||  ||||||||||||||| ||||    
T  41817409 ttcacagttgatgcttcttgtgtttttcctctcttctcc 41817371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 14868448 - 14868573
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||  ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||   || |||||||||||||||||||    
T  14868448 attacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14868547  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  14868548 attcctgtgcttttcctctcttctcc 14868573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 14877486 - 14877361
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||  ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||   || |||||||||||||||||||    
T  14877486 attacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14877387  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  14877386 attcctgtgcttttcctctcttctcc 14877361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 14898996 - 14899121
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||   || |||||||||||||||||||    
T  14898996 attacttgttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14899095  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||  ||| ||||||||||| ||||    
T  14899096 attcatgtgcttttcctctcttctcc 14899121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 10713655 - 10713529
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||| ||||||||| ||   |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10713655 cattacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10713556  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  10713555 gcttcctgtgcttttcttctcttctcc 10713529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 10927425 - 10927299
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||| ||||||||| ||   |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10927425 cattacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10927326  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  10927325 gcttcctgtgcttttcttctcttctcc 10927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 9185064 - 9185189
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |||||||   || |||||||||| ||||||||    
T  9185064 attacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattctggaccccgaaattcagagttgatg 9185163  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  9185164 attcctgtgcttttcctctcttctcc 9185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 14953451 - 14953560
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  14953451 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 14953550  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  14953551 tctcttctcc 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 9190929 - 9191054
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||    || |||||||||| ||||||||    
T  9190929 attacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattatggaccccgaaattcagagttgatg 9191028  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  9191029 attcctgtgcttttcctctcttctcc 9191054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 25690692 - 25690583
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  25690692 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 25690593  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  25690592 tctcttctcc 25690583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 8660783 - 8660903
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||| ||| ||| ||||||  |||||||||||| ||||| ||||||| ||||||||||||||| |||||||| |  ||||||||| ||||||||||||||    
T  8660783 attatttgttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcacacagtgcagtatacacaccgagattcacagttgatg 8660882  T
Q  245 cttccagtgtttttcctctct 265  Q
    ||||| ||| |||||||||||    
T  8660883 cttcctgtgcttttcctctct 8660903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 26034902 - 26034777
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   || | ||||| |||||| ||||    
T  26034902 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccctgaaatacacagtcgatg 26034803  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||  ||| ||||||||||| ||||    
T  26034802 tttcatgtgcttttcctctcttctcc 26034777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 39320259 - 39320151
Alignment:
Q  162 tttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcct 261  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||| ||| ||||||||| |  ||||||| |||  ||| |||||||    
T  39320259 tttctcacttattagttgtgaactttcactataaatagagagctcacacaattcattcgacaaaccgaaatttaacgttgatgtttcacgtgcttttcct 39320160  T
Q  262 ctctgctcc 270  Q
    |||| ||||    
T  39320159 ctcttctcc 39320151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 18023276 - 18023210
Alignment:
Q  204 ctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| ||||| ||||    
T  18023276 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 18023210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 5270856 - 5270905
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  5270856 acacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 5270905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 5927650 - 5927699
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  5927650 acacactgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 5927699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 26188048 - 26188129
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 226  Q
    |||||||| |||||||||||||||| ||||||||||||| |  || |||||||||||| ||||   ||||||||||| ||||    
T  26188048 attacttgttcctaaagtttctcacatattagttgtgaattaactatataaatagagaactcacgtagtgcattccagacac 26188129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 52742621 - 52742684
Alignment:
Q  162 tttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacaca 225  Q
    |||||| | |||||||||| || ||||||||||||||||||||||| | ||| |||||||||||    
T  52742621 tttctcgcgtattagttgtcaattttctctataaatagagagctcacatagttcattccacaca 52742684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 43477410 - 43477477
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    ||||||| |||||||||| ||||||| |||||||||||||||| | |||||  |||||||| ||||||||    
T  43477410 aaagtttatcacttattaattgtgaattttctctataaatagataactcat--agtgcatttcacacacc 43477477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 32545579 - 32545535
Alignment:
Q  163 ttctcacttattagttgtgaactttctctataaatagagagctca 207  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||||    
T  32545579 ttctcacatattagttgcgaattttctctataaatagagagctca 32545535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 30564184 - 30564231
Alignment:
Q  223 acaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||||||| |||  ||||||||||||||| ||||    
T  30564184 acaccgaaattcacagttgatgattcatgtgtttttcctctcttctcc 30564231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 31728803 - 31728846
Alignment:
Q  227 cgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||    
T  31728803 cgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 31728846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 55073849 - 55073774
Alignment:
Q  156 ctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||||||||| ||  ||||||||||||| |||||||||||||||||| ||||   ||| ||||  |||||||||||    
T  55073849 ctaaagtttcacatatattagttgtgaattttctctataaatagagatctcacgtagttcattatacacaccgaaa 55073774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 8694376 - 8694327
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||  ||||| |||| ||||||||||||||| ||||    
T  8694376 acacaccgaaattcacaaatgatgattcctgtgtttttcctctcttctcc 8694327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 31766534 - 31766485
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||||||||  |||| |||||| |||||||| ||||    
T  31766534 acacaccgaaattcacagttgatatttcctgtgtttctcctctcttctcc 31766485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 24490357 - 24490309
Alignment:
Q  222 cacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||| |||  ||| ||||||||||| ||||    
T  24490357 cacaccgaaattcacagttgatgattcttgtgcttttcctctcttctcc 24490309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 49364 - 49489
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||| |    
T  49364 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacg 49463  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  49464 cttcctgtgtttttcctctcttctcc 49489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 149270 - 149145
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||| |    
T  149270 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacg 149171  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||||||||| ||||    
T  149170 cttcctgtgtttttcctctcttctcc 149145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 6112139 - 6112264
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6112139 attacttgctcccaaagtttctcacttattagttgggaactttctatataaatagagagctcacacagtgcattcaacacaccgaaattcacagttgatg 6112238  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||  ||| ||||||||||| ||||    
T  6112239 cttcttgtgcttttcctctcttctcc 6112264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 15704290 - 15704416
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||| |||||||||||||    
T  15704290 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgagattcacagttgat 15704389  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||||||||| ||||| ||||    
T  15704390 gcttcctgtgtttttcttctcttctcc 15704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 158 - 260
Target Start/End: Original strand, 24588571 - 24588673
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||    
T  24588571 aaaggttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctatgtttt 24588670  T
Q  258 tcc 260  Q
    |||    
T  24588671 tcc 24588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 16625130 - 16625005
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  16625130 attacttgttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 16625031  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  16625030 cttcctgtgcttttcttctcttctcc 16625005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 19772391 - 19772517
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  19772391 cattacttgattccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 19772490  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||  ||| ||||| ||||| ||||    
T  19772491 gcttcatgtgcttttcttctcttctcc 19772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 27324440 - 27324564
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||  ||||||| |||||||||||||||||||||||    
T  27324440 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacac--tgcattctacacaccgaaattcacagttgat 27324537  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||||||||| ||||| ||||    
T  27324538 gcttcctgtgtttttcttctcttctcc 27324564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 22807066 - 22806940
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||| ||||||||||| |||| ||||||||||||| || |||| ||||||||||| |||||||||||||||||||||||    
T  22807066 cattacttgtttccaaagtttctcatttattagttgtaaactatctctataaatagggaactcacacagtgcattctacacaccgaaattcacagttgat 22806967  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  22806966 acttcctgtgcttttcttctcttctcc 22806940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 265
Target Start/End: Complemental strand, 2077527 - 2077406
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | |||||||||||||| |||||||| |||| || ||||||||||||| |||  ||||||||||| |||||||||||||||||||||||    
T  2077527 cattacttgtttccaaagtttctcactttttagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgat 2077428  T
Q  244 gcttccagtgtttttcctctct 265  Q
    |||||| ||| ||||| |||||    
T  2077427 gcttcctgtgcttttcttctct 2077406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 16761098 - 16760971
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctc-tataaatagagagctcatacagtgcattccacacaccgaaattcacagttga 242  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  16761098 cattacttgtttccaaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattctacacaccgaaattcacagttga 16760999  T
Q  243 tgcttccagtgtttttcctctctgctcc 270  Q
    | ||||| ||| ||||| ||||| ||||    
T  16760998 tacttcctgtgcttttcttctcttctcc 16760971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 31477083 - 31477186
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  31477083 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccaaaattcacagttgat 31477182  T
Q  244 gctt 247  Q
    ||||    
T  31477183 gctt 31477186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 22949930 - 22949821
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  22949930 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 22949831  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  22949830 tctcttctcc 22949821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 22953886 - 22953777
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  22953886 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 22953787  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  22953786 tctcttctcc 22953777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 23872374 - 23872265
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  23872374 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 23872275  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  23872274 tctcttctcc 23872265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 23876330 - 23876221
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  23876330 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 23876231  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  23876230 tctcttctcc 23876221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 14073836 - 14073724
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||  || ||||||||||||||| ||| |||  ||| |||    
T  14073836 aaagtttctcatctattagttgtgaaatttctctataaatagagagctcatacaatgcattccggaccccgaaattcacagttcatgattcttgtgcttt 14073737  T
Q  258 tcctctctgctcc 270  Q
    |||||||| ||||    
T  14073736 tcctctcttctcc 14073724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 26981306 - 26981184
Alignment:
Q  148 acttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgctt 247  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||  |||||||   || ||||||| ||||||||||||||    
T  26981306 acttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgctt 26981207  T
Q  248 ccagtgtttttcctctctgctcc 270  Q
    || ||| ||||| ||||| ||||    
T  26981206 cctgtgcttttcttctcttctcc 26981184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 27073699 - 27073574
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||  |||||||   || ||||||| |||||||||||    
T  27073699 attacttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatg 27073600  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||| ||||| ||||    
T  27073599 tttcctgtgcttttcttctcttctcc 27073574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 15991075 - 15991157
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||||||| | | |||||||||||||||||||||||||| |||||||| ||||||||| | | || |||||||||||||||||    
T  15991075 attacttgtttccaaagtttctcacttattagttgtgaattttctctacaaatagagaacacgtatagtgcattccacacacc 15991157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 18387646 - 18387521
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||||  || |||||||||||| ||||| ||||||| ||||| ||||||||||||||||| ||| ||||||    || || ||| ||||||||||||    
T  18387646 attacttgtccccaaagtttctcacctattaattgtgaagtttctgtataaatagagagctcacacaatgcattttggaccccaaaaatcacagttgatg 18387547  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  18387546 attcctgtgcttttcctctcttctcc 18387521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 17963991 - 17964040
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  17963991 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 17964040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 2862852 - 2862938
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||||||| ||| |||||| | ||| || || ||||||| ||||||||||||||||||||||| | ||| ||||||| |||||||||    
T  2862852 attacttgttcccaaagttgcacacatactatttgtgaattttctctataaatagagagctcacatagttcattccatacaccgaaa 2862938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 2759756 - 2759818
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctca 207  Q
    |||||||| ||  ||||||||| |||||||||||||||| ||||||| |||| ||||||||||    
T  2759756 attacttgttcaaaaagtttcttacttattagttgtgaattttctctgtaaacagagagctca 2759818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 15641011 - 15640938
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    ||||||| |||| ||||||||||||| | ||||||||||||| ||||||| | | | ||||| |||||||||||    
T  15641011 aaagtttatcacgtattagttgtgaattctctctataaatagtgagctcacataattcattcaacacaccgaaa 15640938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 14322789 - 14322845
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaataga 200  Q
    ||||||||| | | ||||||||||||||||||||||| || | ||||||||||||||    
T  14322789 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaataga 14322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 226 - 265
Target Start/End: Original strand, 5600745 - 5600784
Alignment:
Q  226 ccgaaattcacagttgatgcttccagtgtttttcctctct 265  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  5600745 ccgaaattcataattgatgcttccagtgtttttcctctct 5600784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 11956474 - 11956521
Alignment:
Q  223 acaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    |||||||||||||||||||||| |||| ||| ||||||||||| ||||    
T  11956474 acaccgaaattcacagttgatgattcctgtgcttttcctctcttctcc 11956521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 35084 - 35209
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  35084 attacttgctcccaaagcttgtcacttattagttgtgaactttctctataaatagagagctcacacagtgctttcgatacaccgaaattcacagttgatg 35183  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  35184 cttcctgtgcttttcctctcttctcc 35209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 3727 - 3852
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  3727 attacttgttcctaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctgaaccccgaaattcacagttgatg 3826  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  3827 cttcctgtgcttttcctctcttctcc 3852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 19602 - 19727
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  19602 attacttgttcctaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatg 19701  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| |||| |||||| ||||    
T  19702 cttcctgtgctttttctctcttctcc 19727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 59140 - 59015
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||| ||||||||||||| | ||||||    
T  59140 attacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacataatgctttccatacaccgaaattcataattgatg 59041  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  59040 cttcctgtgcttttcctctcttctcc 59015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 63342 - 63284
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagag 203  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  63342 attacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagag 63284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 620 - 745
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  620 attacttgctcccaaagtttctcacttattagttatgaactttctctacatatagagagctcacacagtgctttcaatacaccgaaattcacagttgatg 719  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||  ||||||||||| ||||    
T  720 cttcctgtacttttcctctcttctcc 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 127104 - 126992
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||    
T  127104 aaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgcttt 127005  T
Q  258 tcctctctgctcc 270  Q
    || ||||| ||||    
T  127004 tcttctcttctcc 126992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 10355 - 10481
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10355 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10454  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||| ||||| ||||| ||||    
T  10455 gcttcctgtgcttttcttctcttctcc 10481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 12347 - 12473
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  12347 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 12446  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||| | ||| ||||| ||||| ||||    
T  12447 gctttctgtgattttcttctcttctcc 12473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 14856 - 14982
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  14856 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 14955  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||  ||| ||||| ||||| ||||    
T  14956 gcttcttgtgcttttcttctcttctcc 14982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 22022 - 21896
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | |||||||||||||||| |||||| |||| |||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||    
T  22022 cattacttgtttccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacacagtgcattctacacactgaaattcacagttgat 21923  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||| ||||||||| ||||| ||||    
T  21922 gcttcctgtgtttttcttctcttctcc 21896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 30981 - 30856
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| | | |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  30981 attacttgtttccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacaccgaaattcacagttgatg 30882  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    |||||  || ||||| ||||| ||||    
T  30881 cttcctatgcttttcttctcttctcc 30856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 24676 - 24801
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  24676 attacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatg 24775  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  24776 attcctgtgcttttcctctcttctcc 24801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 30398 - 30273
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||    
T  30398 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacactgcattcgacaccccgaaattcacagttgatg 30299  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    |||||  || ||||| ||||| ||||    
T  30298 cttcctatgcttttcttctcttctcc 30273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 193647 - 193772
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   ||||||||||||||||||||||    
T  193647 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaggacaccgaaattcacagttgatg 193746  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||||||||| ||||    
T  193747 cttcctgtgcttttcctctcttctcc 193772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 187962 - 188086
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||| ||||||||| |||||||||||||| || | ||| ||| |||||||   || ||||||| |||||||||||    
T  187962 attacttgttcc-aaagtttctcacctatcagttgtgaagtttctctataaatatagggttcacacaatgcattcaggaccccgaaatacacagttgatg 188060  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||| ||||| ||||| ||||    
T  188061 cttcctgtgcttttcttctcttctcc 188086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 71846 - 71741
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa-ttcacagttgat 243  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  71846 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacacagtgcattctacacaccaaaatttcacagttgat 71747  T
Q  244 gcttcc 249  Q
    ||||||    
T  71746 gcttcc 71741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 7103 - 6977
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||| ||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  7103 cattacttgtttccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcatagttgat 7004  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    |||||  ||| ||||||||||| ||||    
T  7003 gcttcatgtgcttttcctctcttctcc 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 10805 - 10931
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10805 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10904  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  10905 acttcctgtgcttttcttctcttctcc 10931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 31964 - 32090
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  31964 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 32063  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  32064 acttcctgtgcttttcttctcttctcc 32090  T

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Target: scaffold0144 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 7592 - 7478
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  7592 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 7493  T
Q  244 gcttccagtgttttt 258  Q
    |||||| ||| ||||    
T  7492 gcttcctgtgctttt 7478  T

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Target: scaffold0141 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 13391 - 13517
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  13391 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 13490  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  13491 acttcctgtgcttttcttctcttctcc 13517  T

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Target: scaffold0124 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 21365 - 21491
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  21365 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 21464  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  21465 acttcctgtgcttttcttctcttctcc 21491  T

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Target: scaffold0034 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Complemental strand, 121281 - 121155
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  121281 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 121182  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
    ||||||  || ||||| ||||| ||||    
T  121181 gcttcctatgcttttcttctcttctcc 121155  T

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Target: scaffold0031 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 35390 - 35516
Alignment:
Q  144 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  35390 cattacttgtttccaaagtttctcacttattagttgtaaacaatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 35489  T
Q  244 gcttccagtgtttttcctctctgctcc 270  Q
     ||||| ||| ||||| ||||| ||||    
T  35490 acttcctgtgcttttcttctcttctcc 35516  T

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Target: scaffold1910 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 580 - 455
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    ||||||||  || |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   | ||||||||||||||||||||    
T  580 attacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctggataccgaaattcacagttgatg 481  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
    ||||| ||||||||| ||||| ||||    
T  480 cttcctgtgtttttcttctcttctcc 455  T

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Target: scaffold0044 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 81272 - 81147
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||| |||| |||||||||||||||||||    
T  81272 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacaccccgaaattcacagttgatg 81173  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||| ||| ||||||||||| ||||    
T  81172 attcctgtgcttttcctctcttctcc 81147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 64874 - 64749
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 244  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||| | | |||| |||||||||||||||||||    
T  64874 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcgtacaacaccccgaaattcacagttgatg 64775  T
Q  245 cttccagtgtttttcctctctgctcc 270  Q
     |||  ||| ||||||||||| ||||    
T  64774 attcatgtgcttttcctctcttctcc 64749  T

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Target: scaffold0575 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 5274 - 5386
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    ||||||||||||||||||||||| |||| || ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||||||||| ||| |||    
T  5274 aaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcatcctacacaccgaaattcacagttgatgcttcctgtgcttt 5373  T
Q  258 tcctctctgctcc 270  Q
    || ||||| ||||    
T  5374 tcttctcttctcc 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 1186 - 1077
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  1186 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 1087  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  1086 tctcttctcc 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 7868 - 7756
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 257  Q
    |||||||||| |||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||| |||||||||| || |||||||| ||| |||    
T  7868 aaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacacagaaattcacaatttatgcttcctgtgattt 7769  T
Q  258 tcctctctgctcc 270  Q
    || ||||| ||||    
T  7768 tcttctcttctcc 7756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 199888 - 199781
Alignment:
Q  161 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 260  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||||     |||||||||||||||||||| |||| ||| ||||||    
T  199888 gtttctcacctattagttgcgaagtttctctataaatagagagctcacacaatgcattc--tggaccgaaattcacagttgatgattcctgtgcttttcc 199791  T
Q  261 tctctgctcc 270  Q
    ||||| ||||    
T  199790 tctcttctcc 199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 256526 - 256444
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 227  Q
    |||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||  ||| | |||||||| ||||||||    
T  256526 attacttgttcccaaagtttctcacttattagttgtgaatattctctataaatagagaaatcacatagtgcatttcacacacc 256444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 22337 - 22264
Alignment:
Q  197 tagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||| ||| |||||||   || |||||||||||||||||||||||| ||| ||||||||||| ||||    
T  22337 tagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtggttttcctctcttctcc 22264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 22372 - 22325
Alignment:
Q  196 atagagagctcatacagtgcattccacacaccgaaattcacagttgat 243  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  22372 atagagaactcacacagtgcattctacacaccgaaattcacagttgat 22325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 8301 - 8215
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||||||| ||| |||||||||||| |||||||| |||  |||||||||||||||  || |||   ||| |||||||||||||||||    
T  8301 attacttgttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacctagttcattccacacaccgaaa 8215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0932 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 1020 - 1105
Alignment:
Q  146 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    ||||||| ||| |||||||||||| |||||||| |||  |||||||||||||||  || |||   ||| |||||||||||||||||    
T  1020 ttacttgttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacgtagttcattccacacaccgaaa 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 11832 - 11783
Alignment:
Q  221 acacaccgaaattcacagttgatgcttccagtgtttttcctctctgctcc 270  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||| ||||    
T  11832 acacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 11783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 22644 - 22583
Alignment:
Q  165 ctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 226  Q
    |||||||||||||||| |||| || ||||||||||||| |||  ||||||||||| ||||||    
T  22644 ctcacttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacac 22583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 6910 - 6954
Alignment:
Q  158 aaagtttctcacttattagttgtgaactttctctataaatagaga 202  Q
    ||||||||||||||||||||||| |||| || |||||||||||||    
T  6910 aaagtttctcacttattagttgtaaactatccctataaatagaga 6954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 5931 - 5985
Alignment:
Q  145 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 199  Q
    |||||||| ||| |||||||||||| |||||||||||   |||||||||||||||    
T  5931 attacttgttccgaaagtttctcacatattagttgtgctttttctctataaatag 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 8344 - 8261
Alignment:
Q  147 tacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 231  Q
    |||||| ||| ||| ||||| ||  ||||| |||||||||||||||||||| |||||||| || ||| || |||| |||||||||    
T  8344 tacttgttcccaaaatttctaacacattagatgtgaactttctctataaat-gagagctcgtatagttcactccatacaccgaaa 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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