View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17030_low_36 (Length: 251)

Name: NF17030_low_36
Description: NF17030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17030_low_36
NF17030_low_36
[»] chr7 (62 HSPs)
chr7 (72-232)||(40463762-40463922)
chr7 (147-231)||(42798629-42798713)
chr7 (147-230)||(47077945-47078028)
chr7 (163-234)||(39123866-39123937)
chr7 (147-231)||(42805484-42805568)
chr7 (147-231)||(47716419-47716503)
chr7 (147-234)||(18326994-18327081)
chr7 (147-230)||(21172099-21172182)
chr7 (147-230)||(32758221-32758304)
chr7 (147-234)||(42495923-42496010)
chr7 (148-230)||(10693163-10693245)
chr7 (147-231)||(2541110-2541195)
chr7 (147-231)||(43557432-43557516)
chr7 (147-231)||(46354154-46354238)
chr7 (147-230)||(48735212-48735296)
chr7 (152-231)||(19426980-19427059)
chr7 (167-234)||(28078219-28078286)
chr7 (149-231)||(27629596-27629678)
chr7 (146-220)||(35334916-35334990)
chr7 (147-231)||(7794597-7794681)
chr7 (147-231)||(22699061-22699145)
chr7 (162-231)||(29907392-29907463)
chr7 (148-231)||(11617679-11617762)
chr7 (163-234)||(33871997-33872068)
chr7 (147-229)||(7193045-7193127)
chr7 (142-231)||(1424001-1424090)
chr7 (162-231)||(3469270-3469339)
chr7 (147-216)||(14732928-14732997)
chr7 (162-231)||(19265790-19265859)
chr7 (162-231)||(28362236-28362305)
chr7 (1-49)||(40463682-40463729)
chr7 (147-206)||(8149062-8149121)
chr7 (163-230)||(42476849-42476916)
chr7 (178-231)||(38262287-38262340)
chr7 (169-230)||(42391190-42391251)
chr7 (147-231)||(5180248-5180332)
chr7 (163-231)||(7644932-7645000)
chr7 (147-231)||(21447550-21447634)
chr7 (163-230)||(13805078-13805145)
chr7 (147-234)||(34626295-34626382)
chr7 (162-233)||(44123710-44123781)
chr7 (162-229)||(48123577-48123644)
chr7 (149-231)||(5814433-5814515)
chr7 (164-233)||(6736867-6736936)
chr7 (150-231)||(12473267-12473348)
chr7 (162-231)||(14099097-14099166)
chr7 (162-231)||(14409114-14409183)
chr7 (162-231)||(16341253-16341322)
chr7 (162-231)||(23419765-23419834)
chr7 (147-230)||(2663025-2663106)
chr7 (173-231)||(18747472-18747530)
chr7 (162-227)||(1524281-1524346)
chr7 (174-231)||(8491906-8491963)
chr7 (174-231)||(8518715-8518772)
chr7 (147-231)||(25198682-25198769)
chr7 (150-231)||(42101976-42102056)
chr7 (191-231)||(7879642-7879682)
chr7 (166-206)||(11741774-11741814)
chr7 (162-206)||(19266425-19266469)
chr7 (163-231)||(22065564-22065632)
chr7 (170-234)||(32233222-32233286)
chr7 (191-231)||(35203443-35203483)
[»] chr8 (35 HSPs)
chr8 (147-234)||(13160662-13160749)
chr8 (146-230)||(20869588-20869672)
chr8 (150-234)||(28407379-28407463)
chr8 (147-231)||(35261639-35261723)
chr8 (147-230)||(12670340-12670423)
chr8 (151-234)||(18164847-18164930)
chr8 (147-230)||(30454187-30454270)
chr8 (147-231)||(28817717-28817801)
chr8 (147-231)||(36720756-36720840)
chr8 (147-231)||(39461087-39461171)
chr8 (147-232)||(7136619-7136704)
chr8 (151-232)||(17823540-17823621)
chr8 (147-231)||(2626479-2626563)
chr8 (147-231)||(20284164-20284248)
chr8 (147-231)||(21070793-21070877)
chr8 (147-231)||(25250482-25250566)
chr8 (147-231)||(44530109-44530193)
chr8 (163-234)||(45071241-45071312)
chr8 (151-231)||(6760786-6760866)
chr8 (147-231)||(29521776-29521860)
chr8 (164-231)||(24365151-24365218)
chr8 (170-231)||(11748282-11748343)
chr8 (162-231)||(14018060-14018129)
chr8 (147-228)||(24245411-24245491)
chr8 (147-231)||(8897855-8897939)
chr8 (163-231)||(26954108-26954176)
chr8 (162-231)||(42083790-42083859)
chr8 (162-230)||(44781598-44781666)
chr8 (162-231)||(22598132-22598201)
chr8 (166-231)||(30962864-30962929)
chr8 (166-230)||(35105902-35105966)
chr8 (169-231)||(31457155-31457217)
chr8 (158-231)||(12625860-12625933)
chr8 (173-233)||(23000307-23000365)
chr8 (162-231)||(26457690-26457759)
[»] chr4 (58 HSPs)
chr4 (147-234)||(5648219-5648306)
chr4 (147-234)||(6430713-6430800)
chr4 (148-231)||(16408694-16408777)
chr4 (147-230)||(48598915-48598998)
chr4 (147-233)||(17315387-17315473)
chr4 (146-231)||(21646923-21647008)
chr4 (147-231)||(14590797-14590881)
chr4 (147-227)||(16911522-16911602)
chr4 (147-230)||(5306755-5306838)
chr4 (147-230)||(11054238-11054321)
chr4 (147-234)||(30639340-30639427)
chr4 (163-233)||(40915805-40915875)
chr4 (147-231)||(14983794-14983878)
chr4 (162-234)||(42164236-42164308)
chr4 (147-231)||(54730209-54730293)
chr4 (147-230)||(20224944-20225027)
chr4 (147-230)||(47528620-47528703)
chr4 (162-227)||(487230-487295)
chr4 (147-206)||(23501753-23501812)
chr4 (162-231)||(35567145-35567214)
chr4 (162-231)||(47441621-47441690)
chr4 (162-231)||(54640430-54640499)
chr4 (147-231)||(30352682-30352766)
chr4 (165-231)||(23580299-23580365)
chr4 (168-230)||(39077886-39077948)
chr4 (166-232)||(49938680-49938746)
chr4 (147-231)||(10660364-10660448)
chr4 (147-231)||(10874509-10874593)
chr4 (147-231)||(37494811-37494895)
chr4 (163-231)||(44363223-44363291)
chr4 (167-234)||(54175043-54175111)
chr4 (147-226)||(55766561-55766641)
chr4 (147-226)||(55830816-55830896)
chr4 (167-230)||(17043486-17043549)
chr4 (166-229)||(30496413-30496476)
chr4 (173-231)||(25463108-25463166)
chr4 (165-231)||(30690274-30690340)
chr4 (170-231)||(7385567-7385628)
chr4 (162-227)||(12257688-12257753)
chr4 (162-231)||(39029152-39029221)
chr4 (163-228)||(43035224-43035289)
chr4 (147-203)||(5313113-5313169)
chr4 (163-231)||(19027824-19027892)
chr4 (163-231)||(25343163-25343231)
chr4 (170-230)||(41018885-41018945)
chr4 (164-207)||(3580951-3580994)
chr4 (147-206)||(13256513-13256572)
chr4 (147-198)||(20405053-20405104)
chr4 (148-231)||(54966983-54967065)
chr4 (152-226)||(8473716-8473790)
chr4 (172-234)||(32629356-32629418)
chr4 (165-230)||(9832403-9832468)
chr4 (147-184)||(18969701-18969738)
chr4 (165-234)||(32478873-32478942)
chr4 (162-231)||(36589719-36589787)
chr4 (150-186)||(20908774-20908809)
chr4 (166-234)||(49938526-49938594)
chr4 (162-214)||(50856344-50856396)
[»] chr2 (42 HSPs)
chr2 (147-231)||(25079809-25079893)
chr2 (147-230)||(7214494-7214577)
chr2 (147-234)||(12024006-12024093)
chr2 (147-234)||(25249825-25249912)
chr2 (147-230)||(8455408-8455491)
chr2 (147-231)||(11514396-11514480)
chr2 (147-231)||(14530278-14530362)
chr2 (158-231)||(24200716-24200789)
chr2 (147-230)||(9671140-9671224)
chr2 (147-231)||(10543658-10543742)
chr2 (147-230)||(21779351-21779434)
chr2 (147-230)||(23397726-23397809)
chr2 (165-231)||(5841006-5841072)
chr2 (154-231)||(17623531-17623608)
chr2 (147-238)||(17705455-17705547)
chr2 (147-231)||(17896219-17896303)
chr2 (147-234)||(22371017-22371102)
chr2 (156-231)||(17667971-17668046)
chr2 (162-231)||(21377164-21377233)
chr2 (165-234)||(44604832-44604901)
chr2 (164-224)||(99361-99421)
chr2 (163-231)||(40416962-40417030)
chr2 (167-234)||(17380324-17380391)
chr2 (159-230)||(45235910-45235981)
chr2 (165-231)||(5450263-5450329)
chr2 (147-233)||(27573581-27573667)
chr2 (162-231)||(23145789-23145858)
chr2 (162-231)||(23557579-23557648)
chr2 (162-231)||(44521464-44521533)
chr2 (178-234)||(14444720-14444776)
chr2 (147-231)||(19977805-19977889)
chr2 (163-231)||(39914397-39914465)
chr2 (165-231)||(31158532-31158598)
chr2 (162-231)||(4516442-4516511)
chr2 (162-231)||(29419980-29420049)
chr2 (147-186)||(39189557-39189596)
chr2 (165-231)||(17472949-17473015)
chr2 (151-233)||(24860075-24860157)
chr2 (172-234)||(25641487-25641549)
chr2 (162-231)||(33795260-33795329)
chr2 (147-227)||(14544023-14544103)
chr2 (191-231)||(17471552-17471592)
[»] chr1 (51 HSPs)
chr1 (147-231)||(46248044-46248128)
chr1 (147-234)||(27474264-27474351)
chr1 (147-231)||(30395819-30395903)
chr1 (147-234)||(32632644-32632731)
chr1 (147-230)||(34725188-34725271)
chr1 (147-229)||(14617021-14617103)
chr1 (147-231)||(41319897-41319981)
chr1 (147-234)||(22930155-22930242)
chr1 (151-234)||(33222971-33223054)
chr1 (147-230)||(38478372-38478455)
chr1 (147-230)||(47214494-47214577)
chr1 (162-231)||(18724636-18724705)
chr1 (158-231)||(23768411-23768484)
chr1 (147-231)||(18944626-18944710)
chr1 (147-231)||(20004183-20004267)
chr1 (147-231)||(46991787-46991871)
chr1 (147-231)||(25290146-25290232)
chr1 (147-234)||(45402078-45402164)
chr1 (147-230)||(45812627-45812710)
chr1 (163-231)||(4430117-4430185)
chr1 (163-231)||(6925099-6925167)
chr1 (162-234)||(11596511-11596583)
chr1 (147-219)||(34714606-34714678)
chr1 (163-229)||(20036219-20036285)
chr1 (147-231)||(10668203-10668292)
chr1 (162-231)||(17470437-17470506)
chr1 (147-231)||(18742051-18742136)
chr1 (162-230)||(35117860-35117928)
chr1 (163-230)||(19414438-19414505)
chr1 (163-226)||(27201646-27201709)
chr1 (147-206)||(40424725-40424784)
chr1 (147-224)||(9939443-9939521)
chr1 (162-231)||(2435878-2435947)
chr1 (162-231)||(2435984-2436053)
chr1 (166-231)||(22327101-22327166)
chr1 (162-231)||(52910215-52910284)
chr1 (147-231)||(8197026-8197110)
chr1 (149-205)||(19932869-19932925)
chr1 (164-231)||(19701570-19701637)
chr1 (164-231)||(25468354-25468421)
chr1 (147-231)||(24564327-24564411)
chr1 (163-227)||(50760321-50760385)
chr1 (147-230)||(12126927-12127010)
chr1 (147-186)||(21723647-21723686)
chr1 (180-231)||(35005139-35005190)
chr1 (196-234)||(22324925-22324963)
chr1 (163-216)||(6983915-6983968)
chr1 (162-231)||(50811937-50812006)
chr1 (162-206)||(10378841-10378885)
chr1 (147-231)||(18335379-18335463)
chr1 (178-230)||(35253277-35253329)
[»] chr5 (26 HSPs)
chr5 (147-234)||(41014279-41014366)
chr5 (147-230)||(22861758-22861841)
chr5 (147-234)||(2838738-2838826)
chr5 (147-231)||(4619197-4619281)
chr5 (147-231)||(24448850-24448934)
chr5 (147-231)||(38879541-38879625)
chr5 (147-231)||(43334162-43334246)
chr5 (147-230)||(35710273-35710356)
chr5 (147-230)||(37024646-37024729)
chr5 (147-231)||(23974741-23974824)
chr5 (163-231)||(27328728-27328796)
chr5 (147-230)||(8170074-8170157)
chr5 (147-231)||(1565391-1565475)
chr5 (162-231)||(28516525-28516594)
chr5 (172-238)||(22907948-22908014)
chr5 (162-227)||(39301098-39301163)
chr5 (147-231)||(22187245-22187329)
chr5 (174-230)||(32703411-32703467)
chr5 (147-234)||(31299592-31299679)
chr5 (162-213)||(39079875-39079926)
chr5 (162-234)||(209015-209087)
chr5 (171-235)||(1850624-1850688)
chr5 (167-231)||(34074653-34074717)
chr5 (163-230)||(22600430-22600497)
chr5 (162-215)||(10634253-10634306)
chr5 (163-203)||(31362454-31362494)
[»] chr3 (38 HSPs)
chr3 (147-234)||(10870039-10870126)
chr3 (147-234)||(16735423-16735510)
chr3 (147-234)||(22609749-22609835)
chr3 (147-231)||(8247780-8247864)
chr3 (147-231)||(13730695-13730779)
chr3 (147-230)||(7696977-7697060)
chr3 (147-231)||(46421128-46421212)
chr3 (147-227)||(52926305-52926385)
chr3 (147-230)||(39203498-39203581)
chr3 (147-228)||(13628886-13628968)
chr3 (147-231)||(40272903-40272987)
chr3 (147-230)||(1217072-1217155)
chr3 (147-230)||(22123007-22123090)
chr3 (166-238)||(5173804-5173876)
chr3 (158-234)||(26869700-26869776)
chr3 (147-231)||(29366813-29366897)
chr3 (147-234)||(6411909-6411996)
chr3 (164-231)||(34420735-34420802)
chr3 (162-231)||(26573124-26573193)
chr3 (162-231)||(30928238-30928307)
chr3 (162-231)||(45620920-45620989)
chr3 (147-231)||(4495755-4495839)
chr3 (147-231)||(9607185-9607269)
chr3 (147-231)||(12914126-12914210)
chr3 (162-241)||(53062035-53062115)
chr3 (173-231)||(516417-516475)
chr3 (146-195)||(25517300-25517349)
chr3 (162-231)||(35417913-35417982)
chr3 (162-231)||(53996657-53996726)
chr3 (163-231)||(26782364-26782432)
chr3 (168-231)||(7942993-7943056)
chr3 (164-231)||(25944468-25944535)
chr3 (176-231)||(54032650-54032705)
chr3 (147-231)||(12525392-12525473)
chr3 (176-234)||(33926094-33926152)
chr3 (176-230)||(45139570-45139624)
chr3 (147-216)||(4537013-4537082)
chr3 (162-230)||(28904940-28905008)
[»] chr6 (26 HSPs)
chr6 (146-231)||(14975171-14975256)
chr6 (151-231)||(12222008-12222088)
chr6 (147-238)||(9161083-9161174)
chr6 (147-231)||(3815168-3815252)
chr6 (147-230)||(1346924-1347007)
chr6 (147-230)||(1354847-1354930)
chr6 (147-228)||(29355951-29356033)
chr6 (147-231)||(8409203-8409287)
chr6 (147-214)||(33922936-33923003)
chr6 (158-231)||(6024204-6024277)
chr6 (147-231)||(20400627-20400711)
chr6 (164-230)||(2166504-2166570)
chr6 (164-230)||(2178137-2178203)
chr6 (150-231)||(12889390-12889470)
chr6 (147-231)||(12063427-12063511)
chr6 (148-231)||(13905070-13905152)
chr6 (158-219)||(8417443-8417504)
chr6 (147-231)||(15866128-15866212)
chr6 (147-231)||(24734593-24734677)
chr6 (172-231)||(18277284-18277343)
chr6 (164-231)||(32728247-32728314)
chr6 (165-231)||(22967149-22967215)
chr6 (165-231)||(23821178-23821244)
chr6 (158-231)||(14553483-14553555)
chr6 (146-231)||(24097540-24097625)
chr6 (147-231)||(1941815-1941899)
[»] scaffold0258 (1 HSPs)
scaffold0258 (147-233)||(13112-13198)
[»] scaffold0005 (1 HSPs)
scaffold0005 (147-231)||(226497-226581)
[»] scaffold0187 (4 HSPs)
scaffold0187 (147-230)||(10140-10223)
scaffold0187 (147-230)||(20468-20551)
scaffold0187 (147-206)||(8905-8964)
scaffold0187 (147-206)||(19233-19292)
[»] scaffold0168 (1 HSPs)
scaffold0168 (147-230)||(30539-30622)
[»] scaffold0031 (1 HSPs)
scaffold0031 (158-238)||(43100-43180)
[»] scaffold0024 (1 HSPs)
scaffold0024 (147-215)||(83835-83903)
[»] scaffold0223 (1 HSPs)
scaffold0223 (148-230)||(11093-11174)
[»] scaffold0194 (1 HSPs)
scaffold0194 (147-216)||(24624-24693)
[»] scaffold0057 (2 HSPs)
scaffold0057 (147-231)||(24863-24942)
scaffold0057 (150-231)||(46794-46875)
[»] scaffold0049 (1 HSPs)
scaffold0049 (147-231)||(58937-59021)
[»] scaffold0116 (1 HSPs)
scaffold0116 (163-234)||(8867-8938)
[»] scaffold0254 (1 HSPs)
scaffold0254 (164-230)||(4134-4200)
[»] scaffold0036 (1 HSPs)
scaffold0036 (173-226)||(35114-35167)
[»] scaffold1176 (1 HSPs)
scaffold1176 (163-230)||(1677-1744)
[»] scaffold0311 (1 HSPs)
scaffold0311 (158-204)||(10781-10827)
[»] scaffold0018 (1 HSPs)
scaffold0018 (149-231)||(72958-73034)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 40463762 - 40463922
Alignment:
Q  72 ctatagaaaattgacccaattgttttatgtgtgatttgtgagtcataccccacttcttttataaacaccctcttataaccttggcacaaccggtaaagtt 171  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40463762 ctatagaaaatagacccaattgttttatgtgtgatttgtgagtcataccccacttcttttataaacaccctcttataaccttggcgcaaccggtaaagtt 40463861  T
Q  172 gttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaac 232  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  40463862 gttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaac 40463922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 42798629 - 42798713
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||    
T  42798629 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaa 42798713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 47078028 - 47077945
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||||    
T  47078028 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 47077945  T

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Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 39123866 - 39123937
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||    
T  39123866 ggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaacag 39123937  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 42805484 - 42805568
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||  ||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  42805484 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 42805568  T

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Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 47716419 - 47716503
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||| || |||||||||| |||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  47716419 taaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 47716503  T

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Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 18326994 - 18327081
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||   ||||||| |||||||||||||||||    
T  18326994 taaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaacag 18327081  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 21172182 - 21172099
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| ||||||||||||||||||| |||| || |||||||||||||||| | ||||||| |||||||||||||    
T  21172182 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 21172099  T

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Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 32758221 - 32758304
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||||||||||||    
T  32758221 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 32758304  T

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Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 42496010 - 42495923
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||| | ||||||| ||||||| |||||||||    
T  42496010 taaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaacag 42495923  T

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Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 10693245 - 10693163
Alignment:
Q  148 aaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||| ||||  ||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10693163  T

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Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 2541195 - 2541110
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgact-gtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| ||||||||||||||||||||||| | || |||||||||||||||| | ||||||| ||||||||||||||    
T  2541195 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 2541110  T

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Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 43557432 - 43557516
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| | |||| |||||||||||||||||||||||| || |||| ||||||||||| | ||||||| ||||||||||||||    
T  43557432 taaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaa 43557516  T

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Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 46354154 - 46354238
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| ||||||||||||||||||||| || || |||||||||||||||| | ||||||  ||||||||||||||    
T  46354154 taaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 46354238  T

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Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 48735296 - 48735212
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagt-cttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||| ||| ||||||  |||||||||||||    
T  48735296 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa 48735212  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 19427059 - 19426980
Alignment:
Q  152 ttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||| |||| |||||||||||||||||||||| | || |||||||||||||||| | ||||||| ||||||||||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 19426980  T

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Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 28078286 - 28078219
Alignment:
Q  167 aagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||  ||||||||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtgtaaaaaaacag 28078219  T

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Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 27629596 - 27629678
Alignment:
Q  149 accttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| |||| ||||||||||||||||| |||| | || |||||||||||||||| | ||||||| ||||||||||||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 27629678  T

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Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 35334990 - 35334916
Alignment:
Q  146 ataaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctc 220  Q
    ||||||||||| |||| |||||||||||||||||||||||| || |||||| ||||||||| | |||||||||||    
T  35334990 ataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctc 35334916  T

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Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 7794681 - 7794597
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| || |||| |||||||||||||| ||||||||| || |||||||||||||||| | ||||||| ||||| ||||||||    
T  7794681 taaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaa 7794597  T

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Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 22699145 - 22699061
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| | |||| |||||||||||||||||||||||| || || | ||||||||||| | |||| |||||||||||||||||    
T  22699145 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaa 22699061  T

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Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 29907392 - 29907463
Alignment:
Q  162 cggtaaagttgttgt--catgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||  |||||||||| || |||||||||||||||| ||||||||| ||||||||||||||    
T  29907392 cggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa 29907463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 11617762 - 11617679
Alignment:
Q  148 aaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||| ||| |||| |||||||||||||||||||||||| || ||||| |||||||||| | ||||||  ||||||||||||||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaa 11617679  T

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Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 33872068 - 33871997
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||||||||||||||||| || ||| |||||||||||| | ||||||  |||||||||||||||||    
T  33872068 ggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacag 33871997  T

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Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 7193045 - 7193127
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaa 229  Q
    ||||||||||  |||  ||||||||||||||||||||||| || |||||||||||||||| | ||||||  ||||||||||||    
T  7193045 taaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 1424090 - 1424001
Alignment:
Q  142 tcttataaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| |||| ||||| |||| |||||||||||||| ||||||||| || ||||||| ||||| || | |||||||||| |||||||||||    
T  1424090 tcttttaactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaa 1424001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 3469339 - 3469270
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||||| || ||||| |  ||||||| |||||||| |||||||||||||||    
T  3469339 cggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaa 3469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 14732997 - 14732928
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacag 216  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||| ||||||||||| | |||||||    
T  14732997 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacag 14732928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 19265790 - 19265859
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||| || |||| | ||||||||||||    
T  19265790 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaa 19265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 28362305 - 28362236
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||| ||| || ||||| |||||||||| ||||||| | ||||||||||||||    
T  28362305 cggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaa 28362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40463682 - 40463729
Alignment:
Q  1 tcatatgcttaaaactttcacactgtattttctcttttatacgttcata 49  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40463682 tcatatgcttaaaactt-cacactgtattttctcttttatacgttcata 40463729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 8149121 - 8149062
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    ||||||||||||||| ||||| |||||||||||||||||| || |||||| |||||||||    
T  8149121 taaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtc 8149062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 42476849 - 42476916
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||||||||||||||  || ||||||| |||||||  | |||||||||||||||||||||    
T  42476849 ggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaa 42476916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 38262340 - 38262287
Alignment:
Q  178 atgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||| || |||||||||||||||| | ||||||||||||||||||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaa 38262287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 42391251 - 42391190
Alignment:
Q  169 gttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||||||||| || |||||||||||||||| | |||||||  ||||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa 42391190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 5180332 - 5180248
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| | |||| |||||||||||||||||||||||| || |||| |||||||| |  | ||||||| ||||||||| ||||    
T  5180332 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaa 5180248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 7644932 - 7645000
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| ||||||| | ||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  7644932 ggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 7645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 21447550 - 21447634
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| | |||| |||||||||||| | || || ||||||| ||||||||||  |||||| ||||||||||||||    
T  21447550 taaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacagcctcttgtgtaaaaa 21447634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 13805078 - 13805145
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||||||||||||||| || || ||||||||||||| | |||| || |||| ||||||||    
T  13805078 ggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaa 13805145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 34626382 - 34626295
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||| || |||| ||||||||||||||||||||| || || | ||| | |||||||| | ||||||| ||| |||||||||||||    
T  34626382 taaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacag 34626295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 44123781 - 44123710
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    ||||||||||| ||||||||||||| ||  | ||||||||||||  | ||||||| ||||||||||||||||    
T  44123781 cggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaaca 44123710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 48123644 - 48123577
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaa 229  Q
    ||||||||||||| ||||||| ||| || |||| ||||||||||| | ||||||| ||||||||||||    
T  48123644 cggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaa 48123577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 5814433 - 5814515
Alignment:
Q  149 accttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| ||| ||||||||||||||| |||||| || || ||||||||||||||| || |||| |  ||||| ||||||||    
T  5814433 accttggcgcaatcggtaaagttgttgttatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 5814515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 6736867 - 6736936
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    ||||||||||||||||| ||||| || |||||||||||||||| |  |||||  ||||||| ||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaaca 6736936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 12473267 - 12473348
Alignment:
Q  150 ccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| ||||||||||||||||||||||||  ||| || |||| ||||||||||| |  |||||  ||||||||| ||||    
T  12473267 ccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaa 12473348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 14099166 - 14099097
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||||| || |||| ||||| ||||| | |||| || || |||||||||||    
T  14099166 cggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaa 14099097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 14409183 - 14409114
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||||| || |||| ||||| ||||| | |||| || || |||||||||||    
T  14409183 cggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaa 14409114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 16341253 - 16341322
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||| ||||||   || || |||||||||||||||  ||||||||| ||||||||||||||    
T  16341253 cggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaa 16341322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 23419834 - 23419765
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||| ||||||||||||  || ||||| |||||||||  | ||||||| ||||||||||||||    
T  23419834 cggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaa 23419765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 2663106 - 2663025
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| ||||  ||||||||||||| ||||||||| |  ||||  |||||||||| | ||||||| |||||||||||||    
T  2663106 taaccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacagcctcttgtgtaaaa 2663025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 18747472 - 18747530
Alignment:
Q  173 ttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| ||||||| || |||||||| ||||||||| ||||||| || |||||||||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaa 18747530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 1524346 - 1524281
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    ||||||||| ||||||| | ||||| || |||||  |||||||||||| |||||| ||||||||||    
T  1524346 cggtaaagtggttgtcacgagactgaaaggtcacaagttcaagtcttataaacagcctcttgtgta 1524281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 8491906 - 8491963
Alignment:
Q  174 tgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||| ||||||| || |||||  |||||||||||| |||||||||||||| ||||||    
T  8491906 tgtcacgtgactgaaaggtcacaagttcaagtcttaaaaacagtctcttgtttaaaaa 8491963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 8518715 - 8518772
Alignment:
Q  174 tgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||| ||||||| || |||||  |||||||||||| |||||||||||||| ||||||    
T  8518715 tgtcacgtgactgaaaggtcacaagttcaagtcttaaaaacagtctcttgtttaaaaa 8518772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 25198682 - 25198769
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttc---aagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||  ||| ||||||||||||||||| |||||| ||  ||| ||| ||   ||||||| |||||||||| |||||||||||    
T  25198682 taaccttggcgtaactggtaaagttgttgtcatatgactgaaagatcatgggatcaaaaagtcttggaaacagtcttttgtgtaaaaa 25198769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 42102056 - 42101976
Alignment:
Q  150 ccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||| |||||||||||||||| ||||||| || ||||   ||||||||| | ||||||| |||||  |||||||    
T  42102056 ccttggcacaac-ggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaa 42101976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 7879642 - 7879682
Alignment:
Q  191 gtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||| | |||||| |||||||||||||||    
T  7879642 gtcacgggttcaagtcctggaaacaatctcttgtgtaaaaa 7879682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 11741774 - 11741814
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    ||||||||||||||||||||| || |||| |||||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 11741814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 19266425 - 19266469
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    ||||||||||||||||||||||||| || |||  |||||||||||    
T  19266425 cggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtc 19266469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 22065564 - 22065632
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||| |||| || || |||| | |||||||| || ||||||  ||||||||||||||    
T  22065564 ggtaaagttgttgtcacgtgattgaaaagtcatgagttcaagttttggaaacaacctcttgtgtaaaaa 22065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 32233286 - 32233222
Alignment:
Q  170 ttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||  |||||| || |||| ||||||||||| | ||||||  |||||||||||||||||    
T  32233286 ttgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaacag 32233222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 35203443 - 35203483
Alignment:
Q  191 gtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||| | |||||| |||||||||||||||    
T  35203443 gtcacgggttcaagtcctggaaacattctcttgtgtaaaaa 35203483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 13160662 - 13160749
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||    
T  13160662 taacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacag 13160749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 20869672 - 20869588
Alignment:
Q  146 ataaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  20869672 ataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 28407379 - 28407463
Alignment:
Q  150 ccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 28407463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 35261639 - 35261723
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||| | | ||||||||||||||||||||||    
T  35261639 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaa 35261723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 12670423 - 12670340
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  12670423 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 12670340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 18164930 - 18164847
Alignment:
Q  151 cttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||| |||||||| |||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  18164930 cttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 18164847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 30454270 - 30454187
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  30454270 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 30454187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 28817801 - 28817717
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  28817801 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 28817717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 36720756 - 36720840
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||  ||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  36720756 taaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 36720840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 39461171 - 39461087
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||| ||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  39461171 taaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 39461087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 7136704 - 7136619
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaac 232  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||| ||||||||||| | ||||||  |||||||||||||||    
T  7136704 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaac 7136619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 17823540 - 17823621
Alignment:
Q  151 cttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaac 232  Q
    |||||| |||| |||||||||||||||||||||| | || |||||||||||||||| | ||||||| |||||||||||||||    
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaac 17823621  T

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Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 2626479 - 2626563
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||  |||||||||||||||||||||| | || |||||||||||||||| | ||||||| ||||||||||||||    
T  2626479 taaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 2626563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 20284248 - 20284164
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| | |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||| ||||||    
T  20284248 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 20284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 21070877 - 21070793
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| | |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||| ||||||    
T  21070877 taaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 21070793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 25250482 - 25250566
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||| |||||||||||||||||||||||| || |||||  ||||||||| | ||||||| || |||||||||||    
T  25250482 taaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaa 25250566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 44530109 - 44530193
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||| ||||||||||||  || |||||||||||||||||| ||||||  ||||||||||||||    
T  44530109 taaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaa 44530193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 45071241 - 45071312
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||||||||||| ||||| |||||||||||||||  | ||||||| |||||||||||||||||    
T  45071241 ggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacag 45071312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 6760786 - 6760866
Alignment:
Q  151 cttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| |||| ||||||||||||||||| |||||  || |||||||||||||||| | ||||||| ||||||||||||||    
T  6760786 cttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 6760866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 29521860 - 29521776
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| | ||||||||||||| |||||||| || |||||||||||||||| | ||||||| ||||||| ||||||    
T  29521860 taaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaa 29521776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 24365218 - 24365151
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||  || |||||||||||||| | ||||||||| ||||||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaa 24365151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 11748282 - 11748343
Alignment:
Q  170 ttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||| ||||| ||||||||    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaa 11748343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 14018129 - 14018060
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| |||||||||| |||| || || |||| ||||||||||||| ||||||||||||||||||||||    
T  14018129 cggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaa 14018060  T

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Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 24245411 - 24245491
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaa 228  Q
    |||||||||  |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||| ||||||| |||||    
T  24245411 taaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac-gtctcttatgtaa 24245491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 8897939 - 8897855
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||| ||||||||| |||||||||||||||||||||| | || |||||||||| ||||| | ||||||  | ||||||||||||    
T  8897939 taaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaa 8897855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 26954108 - 26954176
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||| |  || |||||||||||||||| | ||||||| ||||||||||||||    
T  26954108 ggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 26954176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 42083859 - 42083790
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| ||||||||| ||||||| || |||||||||||||||| | ||||||| || |||||||||||    
T  42083859 cggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaa 42083790  T

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Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 44781666 - 44781598
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||||||| ||||||| ||  ||||||||||||||| | ||||||  |||||||||||||    
T  44781666 cggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaa 44781598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 22598132 - 22598201
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||  |||||| || ||||||||||||| || | ||||||  ||||||||||||||    
T  22598132 cggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaa 22598201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 30962929 - 30962864
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||| || || ||||||  |||||||| | ||||||| ||||||||||||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaa 30962864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 35105902 - 35105966
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||| ||| ||| || |||||||||||||||| | ||||||  |||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 35105966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 31457155 - 31457217
Alignment:
Q  169 gttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||| ||| || |||||||||||||||| |  |||||  ||||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaa 31457217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 12625860 - 12625933
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||||||||||||| |||||||   | |||||||| ||||||| | ||||||  ||||||||||||||    
T  12625860 caactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaa 12625933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 23000365 - 23000307
Alignment:
Q  173 ttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    |||||||||||||| || |||||||||  ||||| | ||||||| ||||||||||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaaca 23000307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 26457690 - 26457759
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||  |||| || || |||| ||||||| |||||| ||| ||| |||||||||||||    
T  26457690 cggtaaagttgttgtcgcgtgattgaaaggtcatgggttcaggtcttaaaaagagtttcttgtgtaaaaa 26457759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 5648219 - 5648306
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| | ||||||| |||||||||||||||||    
T  5648219 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 5648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 6430800 - 6430713
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  6430800 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacag 6430713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 16408777 - 16408694
Alignment:
Q  148 aaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 16408694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 48598998 - 48598915
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  48598998 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 48598915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 17315473 - 17315387
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||||||||||| || | ||||||  ||||||||||||||||    
T  17315473 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaaca 17315387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 21646923 - 21647008
Alignment:
Q  146 ataaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||| |||| |||||||||||||||||||||||| || ||||| |||||||||| | ||||||| ||||||||||||||    
T  21646923 ataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 21647008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 14590797 - 14590881
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||    
T  14590797 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 14590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 16911522 - 16911602
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    |||||||||| |||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||| ||||||||||    
T  16911522 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgta 16911602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 5306838 - 5306755
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||| ||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  5306838 taaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 5306755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 11054321 - 11054238
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||| ||||| |||| |||||||||||||||||||||||| || |||||||||||||||| |  ||||||||||||||||||||    
T  11054321 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgtaaaa 11054238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 30639340 - 30639427
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| ||||||||||||||| |||||||| || ||||| |||||||||| | ||||||| |||||||||||||||||    
T  30639340 taaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacag 30639427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 40915805 - 40915875
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| | ||||||| ||||||||||||||||    
T  40915805 ggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaca 40915875  T

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Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 14983794 - 14983878
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||| ||| ||||||||||||||||| ||| || || ||||||| |||||||||| ||||||| ||||||||||||||    
T  14983794 taaccttggcagaactggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaa 14983878  T

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Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 42164308 - 42164236
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||| ||||||  |||||||||||||||||    
T  42164308 cggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaacag 42164236  T

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Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 54730209 - 54730293
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||| ||| |||||||||||||||||||||||   || |||||||||||||||| ||||||||| ||||||||||||||    
T  54730209 taactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa 54730293  T

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Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 20224944 - 20225027
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||| ||||||||||| | ||||||  |||||||||||||    
T  20224944 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa 20225027  T

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Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 47528703 - 47528620
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||  |||| |||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||||||||||||    
T  47528703 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 47528620  T

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Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 487295 - 487230
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| ||||||  ||||||||||    
T  487295 cggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta 487230  T

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Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 23501753 - 23501812
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||    
T  23501753 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 35567145 - 35567214
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||| |||| || |||| ||||||||||||| ||||||| | ||||||||||||    
T  35567145 cggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaa 35567214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 47441690 - 47441621
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || ||||| ||||||||||  |||||||||||||| ||||||||    
T  47441690 cggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaa 47441621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 54640499 - 54640430
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| ||||||||| ||| ||| || |||||||||||||||||| ||||||| ||||||||||||||    
T  54640499 cggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaa 54640430  T

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Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 30352766 - 30352682
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||| ||||| | || ||||||||||  |||| | ||||||| ||||||||||||||    
T  30352766 taaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaa 30352682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 23580365 - 23580299
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||| ||||||| || |||||||||||||||  |||||| || ||||||||||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaa 23580299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 39077948 - 39077886
Alignment:
Q  168 agttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||||||| || || |||||||||||||||| | ||||||| |||||||||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 39077886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 49938746 - 49938680
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaac 232  Q
    ||||||||||||| ||||||| || ||||| |||||||||| | ||||||| |||||||||||||||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaac 49938680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 10660364 - 10660448
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || || ||  ||||||||| | ||||||  ||||| ||||||||    
T  10660364 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaa 10660448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 10874509 - 10874593
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || || ||  ||||||||| | ||||||  ||||| ||||||||    
T  10874509 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaa 10874593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 37494811 - 37494895
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| ||||||||||||| |||| ||||| || ||||| |||||||||| | ||||||  ||||||||||||||    
T  37494811 taaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaa 37494895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 44363291 - 44363223
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||||| || |||||| ||||||||| |  |||||| ||| ||||||||||    
T  44363291 ggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaa 44363223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 54175043 - 54175111
Alignment:
Q  167 aagttgttgtcatgtgactgtaacgtcacgggttcaagtcttag-aaacagtctcttgtgtaaaaacag 234  Q
    |||||||||||||||||||| || ||||||| |||||||| | | |||||| |||||||||||||||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacag 54175111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 55766641 - 55766561
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcac-gggttcaagtcttagaaacagtctcttgtgt 226  Q
    |||||||| | |||| |||||||||||||||||||||| | || ||||| |||||||||| || |||||||| ||||||||    
T  55766641 taaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgt 55766561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 55830896 - 55830816
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgg-gttcaagtcttagaaacagtctcttgtgt 226  Q
    |||||||| | |||| |||||||||||||||||||||  | || ||||||| |||||||| || |||||||||||||||||    
T  55830896 taaccttgacgcaactggtaaagttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttgtgt 55830816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 17043549 - 17043486
Alignment:
Q  167 aagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||| ||||||| || ||||| |||||||||| | ||||||| |||||||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 17043486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 30496476 - 30496413
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaa 229  Q
    ||||||||||||| ||||||| || |||||| ||||||||| | ||||||| ||||||||||||    
T  30496476 aaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaa 30496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 25463108 - 25463166
Alignment:
Q  173 ttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||| || |||||||||||||||| | ||||||  ||||||||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 25463166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 30690340 - 30690274
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| ||||||| ||||||| || |||||||||||||||| | |||| || ||||||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaa 30690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 7385628 - 7385567
Alignment:
Q  170 ttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| || |||||||||||||| | | ||||||| ||| ||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaa 7385567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 12257753 - 12257688
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    ||||||||||||||||| |||| || || ||||||||||||| || |||||||||  |||||||||    
T  12257753 cggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgtgta 12257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 39029221 - 39029152
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||| |||||||  || ||||  |||||||| ||| ||||||| ||||||||||||||    
T  39029221 cggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaa 39029152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 43035224 - 43035289
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaa 228  Q
    |||||||||||||||| ||||||| || ||||||||||||||||   ||||||  |||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaa 43035289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 5313169 - 5313113
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaa 203  Q
    ||||||||||  ||| ||||||||||||||||||||| || || |||||||||||||    
T  5313169 taaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaa 5313113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 19027824 - 19027892
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||||||||| ||||||| || |||||||||||||||| | ||||||   |||||||||||||    
T  19027824 ggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaa 19027892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 25343163 - 25343231
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||| |||||||  | ||||| |||||||||  | |||| |||||||||||||||||    
T  25343163 ggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaa 25343231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 41018945 - 41018885
Alignment:
Q  170 ttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||| ||||||| || |||||||||||||||| | ||||||  |||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 41018885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 3580994 - 3580951
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtct 207  Q
    ||||||||||||||||||||||| || |||||| ||||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtct 3580951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 13256572 - 13256513
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    |||||||||  |||| |||||||||||||||||||||||| || ||||  ||||||||||    
T  13256572 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtc 13256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 20405053 - 20405104
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacggg 198  Q
    |||||||| | |||| |||||||||||||||||||||||| || ||||||||    
T  20405053 taaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

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Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 54966983 - 54967065
Alignment:
Q  148 aaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||| |||| |||||||||||||||||||||||| || |||||  ||||||||  | |||| |  ||||||||||||||    
T  54966983 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaa 54967065  T

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Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 8473790 - 8473716
Alignment:
Q  152 ttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgt 226  Q
    ||||| |||| ||||||||||||||||| |||| | || ||  |||||||||||| | ||||||| |||||||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgt 8473716  T

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Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 32629418 - 32629356
Alignment:
Q  172 gttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||||| || ||||||||||||| || | ||||||| |||||||  ||||||||    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgtaaaaaaacag 32629356  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 9832468 - 9832403
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||| ||||||| || |||||| || |||||||||||||||| |  |||||| |||||||||||||    
T  9832468 taaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa 9832403  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 18969701 - 18969738
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgac 184  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  18969701 taaccttggcgcaactggtaaagttgttgtcatgtgac 18969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 32478942 - 32478873
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||||||||||||| |  | ||||| |||||||||| | ||||||  |||| ||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacag 32478873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 36589719 - 36589787
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||| |||||  |||||| |||||| | |||||||||| | ||||||| ||||||||||||||    
T  36589719 cggtaaagttgatgtcacatgactgaaacgtc-caggttcaagtcctggaaacagcctcttgtgtaaaaa 36589787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 20908809 - 20908774
Alignment:
Q  150 ccttggcacaaccggtaaagttgttgtcatgtgactg 186  Q
    |||||||||||| ||||||||||||||||||||||||    
T  20908809 ccttggcacaac-ggtaaagttgttgtcatgtgactg 20908774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 234
Target Start/End: Complemental strand, 49938594 - 49938526
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||| ||||||| || ||||| | |||||||||| ||| |||  | ||||||||||||||    
T  49938594 aaagttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgtaaaaacag 49938526  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 50856396 - 50856344
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaac 214  Q
    |||||||||||||||||  ||| || || |||||||||||||||| |||||||    
T  50856396 cggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 25079893 - 25079809
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||  ||||||||||||||    
T  25079893 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaa 25079809  T

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Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 7214494 - 7214577
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||| |||||||||| |||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||||||    
T  7214494 taactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaa 7214577  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 12024093 - 12024006
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  12024093 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 12024006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 25249912 - 25249825
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||||||    
T  25249912 taaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacag 25249825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 8455491 - 8455408
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  8455491 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 8455408  T

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Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 11514396 - 11514480
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||||||||||| || | ||||||| ||||||||||||||    
T  11514396 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaa 11514480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 14530278 - 14530362
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||| ||||||    
T  14530278 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 14530362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 24200789 - 24200716
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  24200789 caactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 24200716  T

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Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 9671140 - 9671224
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgact-gtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||||||||||||||||||||||||||| | || ||||||||||||| || | ||||||| |||||||||||||    
T  9671140 taaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa 9671224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 10543658 - 10543742
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| | |||||||||||||||||||||| || |||||||||||||||| | ||||| | ||||||||||||||    
T  10543658 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaa 10543742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 21779434 - 21779351
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| ||| |||||||||||||||||||| || |||||||||||||||| | || |||| |||||||||||||    
T  21779434 taaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa 21779351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 23397726 - 23397809
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||  |||| |||||||||||||||||||||||| || |||| ||||||||||| | ||||||| |||||||||||||    
T  23397726 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaa 23397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 5841006 - 5841072
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||||| || |||||||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaa 5841072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 17623531 - 17623608
Alignment:
Q  154 ggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| |||||||||||||||||| ||||| || |||||||||||||||| | ||||||  ||||||||||||||    
T  17623531 ggcacaactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaa 17623608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 17705455 - 17705547
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaa-aacagagta 238  Q
    |||||||||  |||| |||||||||||||||||||||||  || |||||||||||||||| | ||||| | |||||||||||| |||||||||    
T  17705455 taaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagta 17705547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 17896219 - 17896303
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| | |||| |||||||||||||||||||||| | || ||||||| |||||||| ||||||||  ||||||||||||||    
T  17896219 taaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaa 17896303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 22371017 - 22371102
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| ||||||||||||||||||||||||  | |||||||||||||||| | ||||||| |||  ||||||||||||    
T  22371017 taaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc--gtgtaaaaacag 22371102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 17667971 - 17668046
Alignment:
Q  156 cacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| |||||||||||||||||||||||| || |||||||||||||||| | |||| |  ||||||||||||||    
T  17667971 cacaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaa 17668046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 21377233 - 21377164
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||||| || || ||| ||||||||| ||||||||  ||||||||||||||    
T  21377233 cggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaa 21377164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 44604832 - 44604901
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||||||||||||||| || ||||| |||||||||| | ||||||  |||||||||||||||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaacag 44604901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 99421 - 99361
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgt 224  Q
    ||||||||||||||| ||||||| || |||||||||||||||| ||||||||| |||||||    
T  99421 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt 99361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 40417030 - 40416962
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||||| || |||||||||||||||| | ||||||  ||||||| ||||||    
T  40417030 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaa 40416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 17380391 - 17380324
Alignment:
Q  167 aagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||||||||||| | || |||||||||||||||||| ||||||  |||||||||| ||||||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacag 17380324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 45235981 - 45235910
Alignment:
Q  159 aaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||| ||||||||||| ||||||||||| ||  ||||| ||||||||| ||||||||||||||| |||||||    
T  45235981 aaccagtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacagtctcttctgtaaaa 45235910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 5450263 - 5450329
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||| || ||||||||||||| || | ||||||  ||||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaa 5450329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 27573581 - 27573667
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||  ||||||||||   | ||||| |||||||||| |||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaaca 27573667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 23145858 - 23145789
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||   ||||||| || ||||||||||||||||||  |||||| ||||||||||||||    
T  23145858 cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaa 23145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 23557648 - 23557579
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||   ||||||| || ||||||||||||||||||  |||||| ||||||||||||||    
T  23557648 cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaa 23557579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 44521533 - 44521464
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||| ||| ||||||| || |||||| |||||| |||| |||||| |||||||||||||||    
T  44521533 cggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaa 44521464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 14444720 - 14444776
Alignment:
Q  178 atgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 14444776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 19977889 - 19977805
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||  ||| ||| |||||||||||||||||| | || |||||||||||||||  | ||||||| ||||| ||||||||    
T  19977889 taaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaa 19977805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 39914465 - 39914397
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||||| || |||||||| ||||||  | ||||||  ||||||||||||||    
T  39914465 ggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaa 39914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 31158598 - 31158532
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||| || |||| ||||| |||||||  |||||| |||||| |||||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaa 31158532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 4516511 - 4516442
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || |||||   |||||||  ||||||||| ||||||||||||||    
T  4516511 cggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaa 4516442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 29420049 - 29419980
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||  |||||| || |||||| ||||||||| | ||||||  ||||||||||||||    
T  29420049 cggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaa 29419980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 39189596 - 39189557
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactg 186  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  39189596 taaccttggcgcaactggtaaagttgttgtcatgtgactg 39189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 17472949 - 17473015
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||  ||| || || |||||||||||| |||||||||| || || |||||||||||    
T  17472949 taaagttgttgtcaaatgattgaaaggtcacgggttcaggtcttagaaatagcctattgtgtaaaaa 17473015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 24860157 - 24860075
Alignment:
Q  151 cttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    |||||| |||| |||||| ||||||||||||||||| || || ||||||| ||| | | ||||||  |||| |||||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaaca 24860075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 25641487 - 25641549
Alignment:
Q  172 gttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||||| || |||||||||||||||| | |||||||  | |||||| |||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacag 25641549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 33795260 - 33795329
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| |||| || || ||||||||||||||||   ||||||  |||||| |||||||    
T  33795260 cggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaa 33795329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 14544023 - 14544103
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    |||||||||| |||  |||||||||||||||||||||||| || || || ||| || ||  | ||||||| ||||||||||    
T  14544023 taaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgta 14544103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 17471552 - 17471592
Alignment:
Q  191 gtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||| ||||||||||| |||||||| ||||||||||||||    
T  17471552 gtcacaggttcaagtctcagaaacagcctcttgtgtaaaaa 17471592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 46248128 - 46248044
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||||||||    
T  46248128 taaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaa 46248044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 27474264 - 27474351
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||| || |||| |||||||||||||||||||||||| || ||||| |||||||||||| |||||||||||||||||||||||||    
T  27474264 taaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacag 27474351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 30395903 - 30395819
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| ||||||||||||||||||||||| ||| |||||||||||||||| | ||||||| ||||||||||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 30395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 32632731 - 32632644
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  32632731 taaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 32632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 34725271 - 34725188
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  34725271 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 34725188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 14617021 - 14617103
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaa 229  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||| ||||||||| | ||||||| ||||||||||||    
T  14617021 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaa 14617103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 41319981 - 41319897
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||| |||||| |||||||||||||||||||||||| || ||||| |||| ||||| | ||||||||||||||||||||||    
T  41319981 taaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaa 41319897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 22930242 - 22930155
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||| ||||||||||| | ||||||| || ||||||||||||||    
T  22930242 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacag 22930155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 33222971 - 33223054
Alignment:
Q  151 cttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||| ||||||||||||||||||||||||||||| || ||||||| || ||||| | ||||||| |||||||||||||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacag 33223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 38478455 - 38478372
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| ||||  ||||| ||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||||||    
T  38478455 taaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaa 38478372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 47214494 - 47214577
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||| ||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||||| |||||    
T  47214494 taactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtttaaaa 47214577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 18724705 - 18724636
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  18724705 cggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 18724636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 23768484 - 23768411
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||| | ||||||| ||||||||||||||    
T  23768484 caactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaa 23768411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 18944626 - 18944710
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||| |||||||| | | ||||||| ||||||||||||||    
T  18944626 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaa 18944710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 20004267 - 20004183
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||| |||||||||    
T  20004267 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaa 20004183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 46991787 - 46991871
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||  ||||||||||||||    
T  46991787 taaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 46991871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 25290146 - 25290232
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaa--acagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||| ||||||||||| |||  |||| ||||||||||||||    
T  25290146 taaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaa 25290232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 45402078 - 45402164
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| ||||||||||||||||||||| || || || ||||||||||||| | ||||||| |||||||||||||||||    
T  45402078 taaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 45402164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 45812710 - 45812627
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| | |||||||||||||||||||||| || ||||| |||||||||| |  ||||||||||||||||||||    
T  45812710 taaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaa 45812627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 4430185 - 4430117
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||||| || |||||||||| |||||||  ||||||| |||||||||||||    
T  4430185 ggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaa 4430117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 6925099 - 6925167
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||||| || |||||||||||||||| | |||| || ||||||||||||||    
T  6925099 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaa 6925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 11596511 - 11596583
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||| | ||||||||||||| || |||||||||||||||| ||||||||  |||||||||||||||||    
T  11596511 cggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacag 11596583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 34714606 - 34714678
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtct 219  Q
    |||||||||| |||| ||||||||||||||||||||| || || |||||||||||||||| | ||||||||||    
T  34714606 taaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacagtct 34714678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 20036219 - 20036285
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaa 229  Q
    |||||||||||||||||||||||| || |||||||||||||||| | ||||||  ||||||||||||    
T  20036219 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaa 20036285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 10668203 - 10668292
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtga-----ctgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||     ||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  10668203 taaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 10668292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 17470506 - 17470437
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| |  |||| ||||||||||| ||||||||| ||||||||||||||    
T  17470506 cggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaa 17470437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 18742136 - 18742051
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtctt-agaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||| |||||||| ||||  |||||||||| |||| ||||||    
T  18742136 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaa 18742051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 35117928 - 35117860
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||||||| ||||||| || |||||||||||||||| | |||| || |||||||||||||    
T  35117928 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaa 35117860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 19414438 - 19414505
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||||||| |||||| || |||||||||||||||| |||||| || ||||| |||||||    
T  19414438 ggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa 19414505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 27201646 - 27201709
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgt 226  Q
    |||||||||||||||||||||||| || |||| ||||||||||| | ||||||| |||||||||    
T  27201646 ggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt 27201709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 40424725 - 40424784
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    |||||||||| |||| |||||||||||||||||||||||| || | ||||||||||||||    
T  40424725 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtc 40424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 9939443 - 9939521
Alignment:
Q  147 taaccttggcacaaccggtaaa-gttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgt 224  Q
    |||||||||| ||||||||||| |||||||||||||||||| || |||||| ||||||||| | ||||||  |||||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgt 9939521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 2435947 - 2435878
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || |||||||||||||||| | ||||||| ||| ||||| ||||    
T  2435947 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaa 2435878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 2436053 - 2435984
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || |||||||||||||||| | ||||||  ||| ||||||||||    
T  2436053 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaa 2435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 22327101 - 22327166
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||| || ||| |||||||||||| | ||||||  ||||||||||||||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaa 22327166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 52910215 - 52910284
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||||| || ||||| ||||||| |||| ||||||| |||||  |||||||    
T  52910215 cggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctcttaggtaaaaa 52910284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 8197026 - 8197110
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| ||| |||||||||||||||||||| || |||||||||||||||| | | ||  | ||||||||||||||    
T  8197026 taaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaa 8197110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 19932925 - 19932869
Alignment:
Q  149 accttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagt 205  Q
    |||||||| |||| |||||||||||||||||||||||| || |||| ||||||||||    
T  19932925 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 19701570 - 19701637
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||| |||||||| || |||||||||| ||||| |  |||||| ||||||||||||||    
T  19701570 gtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaa 19701637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 25468421 - 25468354
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||| || || |||| ||||||||||| | ||||||  ||||||||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaa 25468354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 24564327 - 24564411
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| ||||| ||||||||| |||| ||||| || || ||| | | |||||||||| ||||||  ||||||||||||||    
T  24564327 taaccttggcgcaaccagtaaagttgatgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaa 24564411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 50760385 - 50760321
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    |||||||| |||||||||||||||  | |||||||||||||||| |  |||||| ||||||||||    
T  50760385 ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgta 50760321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 12127010 - 12126927
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| ||||  |||||||||||||||||| | || || |||||||||| ||||  | |||||||  ||||||||||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaa 12126927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 186
Target Start/End: Original strand, 21723647 - 21723686
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactg 186  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  21723647 taaccttcgcacaactggtaaagttgttgtcatgtgactg 21723686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 35005139 - 35005190
Alignment:
Q  180 gtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| || ||||||||||||||||||  |||||| ||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaa 35005190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 22324925 - 22324963
Alignment:
Q  196 gggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  22324925 gggttcaagtcttggaaacagcctcttgtgtaaaaacag 22324963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 6983968 - 6983915
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacag 216  Q
    |||||||||||||||| ||||||| || ||||| |||||||||| | |||||||    
T  6983968 ggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacag 6983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 50811937 - 50812006
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || |||||||  ||| ||| | |||||||  |||||||||||||    
T  50811937 cggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaa 50812006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 10378885 - 10378841
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    ||||||||||||||||| ||||||| || || |||||||||||||    
T  10378885 cggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtc 10378841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 18335463 - 18335379
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||  | ||||||| |||||||||| ||| || |||||  ||| ||||| | ||||||||||||||| ||||||    
T  18335463 taaccttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacagtctcttgtttaaaaa 18335379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 35253329 - 35253277
Alignment:
Q  178 atgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||| ||  ||||||||||||||| | ||||||| |||||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa 35253277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 41014279 - 41014366
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  41014279 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 41014366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 22861841 - 22861758
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||||| | |||||||||||||||||||||| || ||||||| |||||||| ||||| |||||||||||||||||    
T  22861841 taaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa 22861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 2838738 - 2838826
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgt-aacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||||| | |||||||| ||||||||  ||||||||||||||||    
T  2838738 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacag 2838826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 4619281 - 4619197
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | |||| || ||||||||||||||    
T  4619281 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaa 4619197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 24448850 - 24448934
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| || |||||||||||    
T  24448850 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaa 24448934  T

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Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 38879541 - 38879625
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||| ||||||    
T  38879541 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 38879625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 43334162 - 43334246
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||| ||||||||||    
T  43334162 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaa 43334246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 35710273 - 35710356
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| ||||||||||||||||||| |||| || |||||||||||||||| | ||||||| |||||||||||||    
T  35710273 taaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 35710356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 37024729 - 37024646
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||  |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  37024729 taaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 23974741 - 23974824
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||  ||||||||||||||    
T  23974741 taaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 23974824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 27328728 - 27328796
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||||||||||||| || ||||| |||||||||| | ||||||||||||||||||||||    
T  27328728 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaa 27328796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 8170157 - 8170074
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||| | || |||||||||||||||| | ||||||| || ||||||||||    
T  8170157 taaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa 8170074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 1565391 - 1565475
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||| | ||||||  |||||| |||||||    
T  1565391 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaa 1565475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 28516594 - 28516525
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||| ||| || |||||||||||||||||| ||||||  ||||||||||||||    
T  28516594 cggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaa 28516525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 22908014 - 22907948
Alignment:
Q  172 gttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacagagta 238  Q
    ||||| ||||||||| || |||| |||||||||||  |||||||| |||||||||||||||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagta 22907948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 39301098 - 39301163
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    |||||||||||||||||||| |||| || |||||||||||||||||| | ||||  ||||||||||    
T  39301098 cggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgta 39301163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 22187245 - 22187329
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||| ||||  |||||||||||||||| |||||| || ||||| |||| ||||| | ||||||| ||||||||||||||    
T  22187245 taactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaa 22187329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 32703411 - 32703467
Alignment:
Q  174 tgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 32703467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 31299592 - 31299679
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||  |||| |||||||||||||||||||||||   | |||||  ||||||||| ||||||||| ||||||| | |||||||    
T  31299592 taaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctcttgtattaaaacag 31299679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 39079926 - 39079875
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaa 213  Q
    ||||||||||||||||||||||| | || |||||||||||||||||| ||||    
T  39079926 cggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 209087 - 209015
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||||||||||||||  || |||||  ||||||||| | | ||||  |||||||||||||||||    
T  209087 cggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacag 209015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 1850624 - 1850688
Alignment:
Q  171 tgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacaga 235  Q
    |||||||||||||||| || ||||||||||||||||   |||| |  ||||||||||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaacaga 1850688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 34074717 - 34074653
Alignment:
Q  167 aagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||  |||||| || |||||  ||||||||| ||||||||| ||||||||||||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaa 34074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 22600430 - 22600497
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||| ||||||||||| || || ||||||||||||| | |||||| | | ||||||||||    
T  22600430 ggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaa 22600497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 10634306 - 10634253
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaaca 215  Q
    |||| |||||||||||| ||||||| || |||| ||||||||||| ||||||||    
T  10634306 cggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaaca 10634253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 31362494 - 31362454
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaa 203  Q
    ||||||||||||||||||||| || || |||||||||||||    
T  31362494 ggtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 10870126 - 10870039
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||||||    
T  10870126 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacag 10870039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 16735423 - 16735510
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||  ||||||||    
T  16735423 taaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacag 16735510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 22609749 - 22609835
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  22609749 taaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacag 22609835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 8247864 - 8247780
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  8247864 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 8247780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 13730779 - 13730695
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  13730779 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 13730695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 7697060 - 7696977
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||  || |||||||||||||||| | |||||||||||||||||||||    
T  7697060 taaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 7696977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 46421212 - 46421128
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||  || |||||||||||||||| | ||||||| ||||||||||||||    
T  46421212 taaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 46421128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 52926385 - 52926305
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgta 227  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||    
T  52926385 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 39203498 - 39203581
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||||||  ||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||||||||||||    
T  39203498 taaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa 39203581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 13628968 - 13628886
Alignment:
Q  147 taaccttggcacaaccggtaaa-gttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaa 228  Q
    ||||||||||||||| |||||| |||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||    
T  13628968 taaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 13628886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 40272987 - 40272903
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||| ||||||||||| | ||||||  ||||||||||||||    
T  40272987 taaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaa 40272903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 1217072 - 1217155
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| ||||||||||| ||||||| |||| || |||||||||||||||| | ||||||| |||||||||||||    
T  1217072 taaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 1217155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 22123090 - 22123007
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| | || |||||| ||||||||||||||||| || ||| |||||||||||| | |||||||||||||||||||||    
T  22123090 taaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaa 22123007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 5173876 - 5173804
Alignment:
Q  166 aaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacagagta 238  Q
    ||||||||||||||||||||| || |||||||||||||||| | ||||||  |||||||||||||||| ||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagta 5173804  T

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Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 26869700 - 26869776
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||| |||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||| ||||||||||||    
T  26869700 caactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacag 26869776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 29366897 - 29366813
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||  ||| |||||||||||||||||||||||  || |||||||||||||||| | ||||||| ||||||| ||||||    
T  29366897 taaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 29366813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 6411996 - 6411909
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    |||||||| | |||| ||||||||||||||||||| ||||  | |||| |||||||||||||  |||||| |||||||||||||||||    
T  6411996 taaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacag 6411909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 34420802 - 34420735
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||| ||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 34420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 26573124 - 26573193
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || |||||||||||||||| | ||||||| ||| ||||||||||    
T  26573124 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaa 26573193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 30928307 - 30928238
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||| |||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  30928307 cggtcaagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 30928238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 45620989 - 45620920
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||| ||||||| || |||||||||||||||  | ||||||| ||||||||||||||    
T  45620989 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaa 45620920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 4495839 - 4495755
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| || |||| |||||||||||||||||||||||| || |||||||||||||||| |  ||| || || |||||||||||    
T  4495839 taaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaa 4495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 9607185 - 9607269
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| ||||  ||||||||||||||||||||||| || ||||  |||||||||| | ||||||| |||||| |||||||    
T  9607185 taaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaa 9607269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 12914210 - 12914126
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||| ||||||| | || |||||  ||||||||| | ||||||| ||||||||||||||    
T  12914210 taaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaa 12914126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 53062035 - 53062115
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgt-aaaaacagagtataa 241  Q
    ||||||||||||||||||||||||| || |||||| ||||||||| | ||||||| ||| ||||| |||||||| ||||||    
T  53062035 cggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggtataa 53062115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 516417 - 516475
Alignment:
Q  173 ttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 516475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 25517349 - 25517300
Alignment:
Q  146 ataaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcac 195  Q
    ||||||||||| |||| |||||||||||||||||||||||| || |||||    
T  25517349 ataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 35417913 - 35417982
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||| |||||||||||  | |||||| |||||| || | ||||||| ||||||||||||||    
T  35417913 cggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaa 35417982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 53996726 - 53996657
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| |||||||||| |||||| || |||||| ||||||||| | ||||||  ||||||||||||||    
T  53996726 cggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaa 53996657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 26782364 - 26782432
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||| |||||||| || || || ||||||| |||||||| | |||||| |||||||||||||||    
T  26782364 ggtaaagttattgtcatgcgattgaaaggtcacggattcaagtccttgaaacaatctcttgtgtaaaaa 26782432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 7942993 - 7943056
Alignment:
Q  168 agttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||| || ||||||| |||||||| | |||||||  |||||| ||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaa 7943056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 25944468 - 25944535
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||| ||||||| || |||| ||||||||||| | ||||| | |||| |||||||||    
T  25944468 gtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaa 25944535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 54032705 - 54032650
Alignment:
Q  176 tcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||| || |||||||||||||||| | ||||||  ||||||||||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 54032650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 12525392 - 12525473
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||   ||| |||||| || ||||| ||||| |||| | ||||||| ||||||||||||||    
T  12525392 taaccttggcgcaactggtaaagttgt---catatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaa 12525473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 33926094 - 33926152
Alignment:
Q  176 tcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||| || |||| ||||||||||| | |||| || |||||||||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacag 33926152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 45139624 - 45139570
Alignment:
Q  176 tcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||| || ||||||||||||||| || ||||||  |||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaa 45139570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 4537013 - 4537082
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacag 216  Q
    ||||||||||| || |||||| ||||| ||||||||| || || |||||||||| |||| || |||||||    
T  4537013 taaccttggcataatcggtaatgttgtggtcatgtgattgaaaggtcacgggtttaagttttggaaacag 4537082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 28904940 - 28905008
Alignment:
Q  162 cggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||||||||||||||  || |||||  ||| |||||   | |||||||||||||||||||    
T  28904940 cggtaaagttgttgtcatgtgactaaaaagtcacatgtttaagtccagggaacagtctcttgtgtaaaa 28905008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 14975256 - 14975171
Alignment:
Q  146 ataaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||| | ||||||| ||||||||||||||    
T  14975256 ataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaa 14975171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 12222088 - 12222008
Alignment:
Q  151 cttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||||||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaa 12222008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 9161083 - 9161174
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacagagta 238  Q
    |||||||| | ||| ||||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||||||||||||||||||||    
T  9161083 taaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagta 9161174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 3815252 - 3815168
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| || |||||||||||    
T  3815252 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaa 3815168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 1346924 - 1347007
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| | |||||||||||    
T  1346924 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa 1347007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 1354930 - 1354847
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||||||||||||    
T  1354930 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa 1354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 29356033 - 29355951
Alignment:
Q  147 taaccttggcacaaccggtaaag-ttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaa 228  Q
    ||||||||||||||| ||||||  ||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||    
T  29356033 taaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaa 29355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 8409203 - 8409287
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||| ||||||||| || ||||||| |||||||| | ||||| | ||||||||||||||    
T  8409203 taaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaa 8409287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 33923003 - 33922936
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaac 214  Q
    |||||||||| |||||||||||||||||||||| |||||| || ||||| |||||||||| |||||||    
T  33923003 taaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaac 33922936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 6024204 - 6024277
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||||||||||||||||||| || || ||||||| ||||| || ||||||||| ||||||||||||||    
T  6024204 caactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaa 6024277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 20400627 - 20400711
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||  |||| ||||||||||||||||||| || ||||| |||||||||  | |||||| |||||||||||||||    
T  20400627 taaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaa 20400711  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 2166570 - 2166504
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||| ||||||||| || |||||||||||||||| | ||||||  |||||||||||||    
T  2166570 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 2178203 - 2178137
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||| ||||||||| || |||||||||||||||| | ||||||  |||||||||||||    
T  2178203 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2178137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 12889390 - 12889470
Alignment:
Q  150 ccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||||| |||||||||||||||| |||| || || ||||| ||||||||||||  |||||| ||||||||| ||||    
T  12889390 ccttggcacaac-ggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaa 12889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 12063427 - 12063511
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| | |||||||||| ||||| ||||| || |||||||||||||||| |||||| || ||||||| ||||||    
T  12063427 taaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaa 12063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 13905152 - 13905070
Alignment:
Q  148 aaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||| |||| |||||||||||||||||||||||| || |||||||| ||||||| |  ||||   ||||||||||||||    
T  13905152 aaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaa 13905070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 8417443 - 8417504
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtct 219  Q
    |||| |||||||||||||||||||||||| || |||||| ||||| ||| | ||||||||||    
T  8417443 caactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaacagtct 8417504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 15866212 - 15866128
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| ||||||||||||| ||||||| || || |||| |||||||| || | ||||||| |||||  |||||||    
T  15866212 taaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaa 15866128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 24734593 - 24734677
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||| |||| |||||||||||||||||||||||| || ||||   |||||| || | ||||||  ||||||||||||||    
T  24734593 taacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaa 24734677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 18277343 - 18277284
Alignment:
Q  172 gttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||| |||||||  || ||||||||||||| |||| ||||||| ||||||||||||||    
T  18277343 gttgtcctgtgactaaaaggtcacgggttcaaatcttggaaacagcctcttgtgtaaaaa 18277284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 32728314 - 32728247
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||||||||||||||||||| || ||||| | ||||||| || ||||||  ||||| ||||||||    
T  32728314 gtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaa 32728247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 22967149 - 22967215
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| ||||||||||||||||| |||||  ||||||||| | ||||||   |||||||||||||    
T  22967149 taaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 22967215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 23821244 - 23821178
Alignment:
Q  165 taaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| ||||||||||||||||| |||||  ||||||||| | ||||||   |||||||||||||    
T  23821244 taaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 23821178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 14553483 - 14553555
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| |||||||||||||||||||||||  || ||||| |||||||||| | |||| ||  |||||||||||||    
T  14553483 caactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaa 14553555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 24097540 - 24097625
Alignment:
Q  146 ataaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||| ||||||||||| |||||| ||| |||||||| |||| || |||||| ||| ||||| | ||| ||| ||||||| ||||||    
T  24097540 ataaacttggcacaactggtaaaattgatgtcatgttactgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaa 24097625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 1941815 - 1941899
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| ||||||||||||||||| |||||| || ||| ||| || ||||| |  |||||  ||||||||||||||    
T  1941815 taaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaa 1941899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 13198 - 13112
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaaca 233  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||||| |||||||||    
T  13198 taaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaaca 13112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 226581 - 226497
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||    
T  226581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaa 226497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 10223 - 10140
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||| | |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  10223 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 20551 - 20468
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||| | |||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  20551 taaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 8905 - 8964
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    |||||||||| |||||||| |||||||||||||||||||| || ||||| ||||||||||    
T  8905 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 19233 - 19292
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 206  Q
    |||||||||| |||||||| |||||||||||||||||||| || ||||| ||||||||||    
T  19233 taaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 19292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 30539 - 30622
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||||| || ||||| |||||||||| | ||||||| |||||||||||||    
T  30539 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa 30622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 43100 - 43180
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacagagta 238  Q
    |||| ||||||||| ||||||||||| || || |||||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  43100 caactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaacagagta 43180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 83835 - 83903
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaaca 215  Q
    |||||||||| ||||  ||||||||||||||||||||||| || |||||||||||||||||| ||||||    
T  83835 taaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 11093 - 11174
Alignment:
Q  148 aaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||| |||| |||||||||||| | ||||||||| || |||||||||||||||| | ||||||| |||||||||||||    
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 11174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 24624 - 24693
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacag 216  Q
    ||||||||||||||  | |||||||||||||| |||||||||| |||||||||||||||| | |||||||    
T  24624 taaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacag 24693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 24942 - 24863
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||| |||| |||||||||||||||||||||||| || |||| |||||||||||     ||||| ||||||||||||||    
T  24942 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaa 24863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 46794 - 46875
Alignment:
Q  150 ccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    ||||||| |||  |||||||||||||||||||||||  || |||||||||||||||  | ||||||  ||||||||||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaa 46875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 58937 - 59021
Alignment:
Q  147 taaccttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaa 231  Q
    |||||||||  |||| |||||| || |||||||||||||| || |||||||||||||||| | ||||||| ||||||| ||||||    
T  58937 taaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 59021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 8867 - 8938
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaaacag 234  Q
    ||||||||||||||||||||||||||| ||||| ||||||| || | ||||||   ||||||||||||||||    
T  8867 ggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaacag 8938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 4134 - 4200
Alignment:
Q  164 gtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    ||||||||||||| ||||||||| || |||||||||||||||| | ||||||  |||||||||||||    
T  4134 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 4200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 35167 - 35114
Alignment:
Q  173 ttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgt 226  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||||||||||||    
T  35167 ttgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgt 35114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 1744 - 1677
Alignment:
Q  163 ggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaacagtctcttgtgtaaaa 230  Q
    |||||||||||||||||||||||| || |||| ||||||||||| |  |||||  |||||||||||||    
T  1744 ggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa 1677  T

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Target: scaffold0311 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 10781 - 10827
Alignment:
Q  158 caaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaag 204  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||    
T  10781 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaag 10827  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 73034 - 72958
Alignment:
Q  149 accttggcacaaccggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcttagaaac-agtctcttgtgtaaaaa 231  Q
    |||||||| |||| ||||||||||||||||||||        |||||||||||||||| ||||||| |||||||||||||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgtgt-------gtcacgggttcaagtcctagaaacaagtctcttgtgtaaaaa 72958  T

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