View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17030_low_9 (Length: 469)
Name: NF17030_low_9
Description: NF17030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17030_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 7 - 451
Target Start/End: Original strand, 31537389 - 31537823
Alignment:
| Q |
7 |
taaattatactgctaacatcaaattaagttcatagcaatattaatctatgtgtccaattaagttcattaaataagcacaaaagctaagaacaacatcttc |
106 |
Q |
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| T |
31537389 |
taaattatactgctaacatcaaattaagttcatagcaatattaatctatgtgtccaattaagttcattaaataagcacaaaagctaagaacaacatcttc |
31537488 |
T |
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| Q |
107 |
attcaacagaaggtaaataaaggttaccttctgcctctaattctagatagaccaagatattgtcagaatttttaatgatttacactcaagtataaaatca |
206 |
Q |
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| T |
31537489 |
attcaacagaaggtaaataaaggttaccttctgcctctaattctacatataccaagatattgtcagaatttttaatgatttacactcaagtataaaatca |
31537588 |
T |
|
| Q |
207 |
ttctttctaatagagagatagaatattcaccttataaacaagtctaaccaagcttattattgtcagtactccagagcagtaggtttgattcaacctatat |
306 |
Q |
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| T |
31537589 |
ttctttctaatagagagatagaatattcacctta----------taaccaagcttattattgtcaatactccagagcagtaggtttgattcaacctatat |
31537678 |
T |
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| Q |
307 |
gctctgtaaaaataaaacataaataacacaacaaactgtcgggttcgattatagcataacaatacaccagagcagcagtacatcaacaacttaacattag |
406 |
Q |
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|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31537679 |
gctctgcaaaaataaaacataaacaacacaacaaactgtcgggttcgattatagcataacaatacaccagaacagcagtacatcaacaacttaacattag |
31537778 |
T |
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| Q |
407 |
aatacgcaactaaattacatcagaattcagaacagagggatttac |
451 |
Q |
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| T |
31537779 |
aatatgcaactaaattacatcagaattcagaacagagggatttac |
31537823 |
T |
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