View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17031_high_10 (Length: 383)
Name: NF17031_high_10
Description: NF17031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17031_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 24058019 - 24057653
Alignment:
| Q |
1 |
ccagaaacccttatctctgtggttctgttaccattcataaatagatccacgaccatatagttggtagtgttgctaatcatgtcacagtaatgcacgcgaa |
100 |
Q |
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| T |
24058019 |
ccagaaacccttatctctgtggttctgttaccattcataaatagatccacgaccatatagttggtagtgttgctaatcatgtcacagaaatgaacgcgaa |
24057920 |
T |
|
| Q |
101 |
caaaataaagtaagtttggccttacacggaatacccaatttaagcggtaacctcttgaggcacttcccatggctttagcagtagcataaaccattggtgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24057919 |
caaaataaagtaagtttggccttacacggaatacccaatttaagcggtaacctcttgaggcacttcccatggctttagcagtagcataaaccattggtgg |
24057820 |
T |
|
| Q |
201 |
tgctgtaatttctaagagatcaggatgctttatagcagaaatgtttgttgaaatattcatcgcgttagtggtggggcgaaagtaagtttcatcactctcc |
300 |
Q |
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||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||| || |||||| ||||||||||||||||||||||||| |
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| T |
24057819 |
tgctgtaatttctaagaaatcaggatgctttatagcagaaacgcttgttgaaatattcaacgcagtaatggtggagcgaaagtaagtttcatcactctcc |
24057720 |
T |
|
| Q |
301 |
caacttctactaagcgtgtcattttgagcattgatacttgcgcctcccacattcaatcgatacacag |
367 |
Q |
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||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24057719 |
caactcctactaagtgtatcattttgagcattgatacttgcgcctcccacattcaatcgatacacag |
24057653 |
T |
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