View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17031_low_18 (Length: 267)
Name: NF17031_low_18
Description: NF17031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17031_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 12 - 248
Target Start/End: Complemental strand, 35296750 - 35296514
Alignment:
| Q |
12 |
tattcttagtgtaaataccattggttctgttttagtcaatgctgttaatcgtgcacacacaattattgatattacgttctcactcgccattagtccttcc |
111 |
Q |
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| T |
35296750 |
tattcttagtgtaaataccattggttctgttttagtcaatgctgttaatcgtgcacacacaattattgatattacgttctcactcgccattagtccttcc |
35296651 |
T |
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| Q |
112 |
tttcattgaagagaatggactccatgatgaaagagaattattgtcgtccatcaaaagtcaagtacctatccttcatagttgagggttttagaccaaaaca |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
35296650 |
tttcattgaagagaatggactccatgatgaaagagaattattgtcgtccatcaaaagtcaagtacctatccttcatagctgagggttttagaccaaaaca |
35296551 |
T |
|
| Q |
212 |
tggcaccaaataaatattggattacaatatatagttg |
248 |
Q |
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| T |
35296550 |
tggcaccaaataaatattgcattacaatatatagttg |
35296514 |
T |
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