View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17033_high_17 (Length: 308)
Name: NF17033_high_17
Description: NF17033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17033_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4069721 - 4069975
Alignment:
| Q |
1 |
tttgctctctatccccttcaccatttgcccatacattggtttgtaatgcatatggtttcccttctctgttgcccaaaaattcaaagtctaactcgtcgtg |
100 |
Q |
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| T |
4069721 |
tttgctctctatccccttcaccatttgcccatacattggtttgtaatgcatatggtttcccttctctgttgcccaaaaattcaaagtctaactcgtcgtg |
4069820 |
T |
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| Q |
101 |
actatctccttgtgacatcagctacacacaaaataaataatatatttattgaagacaattgatcaaagtcacatgttacgtaattatcagagacattatt |
200 |
Q |
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| T |
4069821 |
actatctccttgtgacatcagctacacacaaaataaataatatatttattgaagacaattgatcaaagtcacaggtttcgtaattatcagagacattatt |
4069920 |
T |
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| Q |
201 |
tgcaggggtaaagttaaaaccctaaatttctcacgtttaaaagtttgaatgtaac |
255 |
Q |
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| T |
4069921 |
tacaggggtaaagttaaaaccctaaatttcccacatttaaaagtttgaatgtaac |
4069975 |
T |
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