View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17034_high_26 (Length: 397)
Name: NF17034_high_26
Description: NF17034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17034_high_26 |
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Alignment Details
Target: chr6 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 13 - 355
Target Start/End: Original strand, 34969909 - 34970254
Alignment:
| Q |
13 |
aatattggaatagtgaaaagggcactattttgttgtttcgtccatggctccaaaatttttaagatcaaccttgccactactgcatgttttccgaccatta |
112 |
Q |
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| T |
34969909 |
aatattggaatagtgaaaagggcactattttgttgtttcgttcatggctccaaaattttaaagatcaaccttgccactactccatgttttccgaccatta |
34970008 |
T |
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| Q |
113 |
catgannnnnnnnnn--ggtcagatcattacatgatttaattgggtcgacgataattcatgaggactttgctataaaaa-gagtcgtgcaaatagcattg |
209 |
Q |
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| T |
34970009 |
catgatttattttttttggtcagaccattacatgatttaattgggtcgacgataattcatgaggactttgctataaaaaagtgtcgtgcaaataacattg |
34970108 |
T |
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| Q |
210 |
ttgttcttttaatatgtattttggcatnnnnnnnttgcagagaattatctgcataatatacatatatagaaattgaagtgcttacattgcatggaatatt |
309 |
Q |
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| T |
34970109 |
ttgttcttttaatatgtattttggcataaaaaaattgcagagaattatctgcataatatacatatatagaaattgaagtgcttacattgcatggaatatt |
34970208 |
T |
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| Q |
310 |
tggaatgagctttccacacaattaattatcattggttatcttaagg |
355 |
Q |
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| T |
34970209 |
tggaatgagctttccacacaattaattttcattggttatcttaagg |
34970254 |
T |
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