View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17036_low_21 (Length: 247)
Name: NF17036_low_21
Description: NF17036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17036_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 38290675 - 38290446
Alignment:
| Q |
1 |
ataacatgcatgtcacaaagtcaagctgatggaatgtaatattcaagaaagaaattgaagagaagttggatataggtcaccatgactgtcacgtggcata |
100 |
Q |
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| T |
38290675 |
ataacatgcatgtcacaaagtcaagctgatggaatgtaatattcaagaaagaaattgaagagaagttggatataggtcaccatgactgtcacgtggcata |
38290576 |
T |
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| Q |
101 |
tcacatggtttagggtccatcagtgacaagcaagaagataatatatatgcatgtatatggtttgaactttgaacaacacctatttttgtagggcaaattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
38290575 |
tcacatggtttagggtccatcagtgacaagcaagaagataatatatatgcatgtatatggtttgaactttgaacaacacctatttttttagggcaaattt |
38290476 |
T |
|
| Q |
201 |
tttcataatgtgacaaaatttaactccaca |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
38290475 |
tttcataatgtgacaaaatttaactccaca |
38290446 |
T |
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