View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17036_low_6 (Length: 412)
Name: NF17036_low_6
Description: NF17036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17036_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 14 - 295
Target Start/End: Complemental strand, 37219203 - 37218922
Alignment:
| Q |
14 |
ttctccaacattaacaaacacgtaagtagattcaataccatttgtcaaaagatattaaaatttaattatgtcaaatttatgacttgagtttcatctgtca |
113 |
Q |
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| T |
37219203 |
ttctccaacattaacaaacacgtaagtagattcaataccatttgtcaaaagaaattaaaatttaattatgtcaaatttatgacttgagtttcatctgtca |
37219104 |
T |
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| Q |
114 |
aatttcagggatgaaactccttttatgaccaatgccacagaatcatatcagccacaatttcaagggtgcaactccaagtgctataaaattgttgaagagg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37219103 |
aatttcagggatgaaactccttttatgaccaatgccacagaatcatatcagccacaatttcaagggtgcaactccaagtgctataaaattgttgaagagg |
37219004 |
T |
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| Q |
214 |
tttgtatattcttgcaaaaacttttacttaaaatatttgtctgtcgttgatttggaatcgcagacatccatgcattaaaagt |
295 |
Q |
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| T |
37219003 |
tttgtatattcttgcaaaaacttttacttaaaatatttgtctgtcgttgatttggaatcgcagacatccatgcattaaaagt |
37218922 |
T |
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