View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17036_low_9 (Length: 352)

Name: NF17036_low_9
Description: NF17036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17036_low_9
NF17036_low_9
[»] chr3 (60 HSPs)
chr3 (1-195)||(34015696-34015890)
chr3 (1-192)||(34014507-34014698)
chr3 (10-192)||(24376365-24376547)
chr3 (1-189)||(53101545-53101731)
chr3 (103-196)||(23091186-23091279)
chr3 (103-196)||(28777717-28777810)
chr3 (107-192)||(31937034-31937119)
chr3 (103-191)||(31938337-31938425)
chr3 (70-192)||(27750428-27750550)
chr3 (103-192)||(23073404-23073493)
chr3 (105-190)||(35759263-35759348)
chr3 (103-194)||(54354421-54354512)
chr3 (103-193)||(21727908-21727998)
chr3 (103-189)||(43394084-43394170)
chr3 (103-189)||(52525389-52525475)
chr3 (103-193)||(54353021-54353111)
chr3 (103-196)||(17742323-17742416)
chr3 (103-196)||(19043643-19043736)
chr3 (103-188)||(46902334-46902419)
chr3 (10-190)||(27749107-27749287)
chr3 (15-187)||(43392630-43392801)
chr3 (105-192)||(2232601-2232688)
chr3 (105-192)||(17117431-17117518)
chr3 (103-190)||(37609322-37609409)
chr3 (105-196)||(50881141-50881232)
chr3 (103-193)||(17116200-17116290)
chr3 (103-188)||(5691124-5691209)
chr3 (134-191)||(10979236-10979293)
chr3 (103-192)||(46986120-46986209)
chr3 (103-196)||(53764424-53764516)
chr3 (132-192)||(11348530-11348590)
chr3 (70-194)||(53101770-53101894)
chr3 (103-190)||(53765996-53766083)
chr3 (105-188)||(55209785-55209868)
chr3 (103-191)||(2233335-2233423)
chr3 (114-190)||(47429628-47429704)
chr3 (144-188)||(37610797-37610841)
chr3 (1-188)||(23072063-23072248)
chr3 (142-192)||(35758063-35758113)
chr3 (134-196)||(46903685-46903747)
chr3 (133-193)||(5689723-5689783)
chr3 (103-175)||(21729218-21729290)
chr3 (143-191)||(53178701-53178749)
chr3 (114-190)||(53180845-53180920)
chr3 (105-168)||(50879517-50879580)
chr3 (142-193)||(52521925-52521976)
chr3 (142-195)||(11346808-11346861)
chr3 (143-188)||(15290559-15290604)
chr3 (1-81)||(31937164-31937244)
chr3 (1-81)||(37610672-37610752)
chr3 (142-189)||(33113379-33113426)
chr3 (142-173)||(46903633-46903664)
chr3 (1-79)||(43393962-43394040)
chr3 (143-192)||(28776447-28776496)
chr3 (103-188)||(47431217-47431302)
chr3 (144-173)||(53764506-53764535)
chr3 (1-57)||(17740983-17741039)
chr3 (1-57)||(19042303-19042359)
chr3 (1-81)||(46903533-46903613)
chr3 (1-57)||(52522079-52522135)
[»] chr7 (57 HSPs)
chr7 (10-192)||(27071019-27071201)
chr7 (10-192)||(27207112-27207294)
chr7 (10-192)||(26006680-26006862)
chr7 (1-191)||(45688867-45689055)
chr7 (1-193)||(42611433-42611625)
chr7 (192-343)||(34052067-34052218)
chr7 (49-190)||(7057306-7057446)
chr7 (1-191)||(44231770-44231960)
chr7 (105-195)||(29188062-29188152)
chr7 (103-205)||(44417443-44417545)
chr7 (103-196)||(19217622-19217715)
chr7 (103-194)||(29186661-29186752)
chr7 (103-193)||(44420552-44420642)
chr7 (103-188)||(3537429-3537514)
chr7 (105-194)||(32519781-32519870)
chr7 (103-196)||(48792438-48792531)
chr7 (103-191)||(13750666-13750754)
chr7 (103-195)||(43962599-43962691)
chr7 (103-192)||(43113673-43113762)
chr7 (103-192)||(48793546-48793635)
chr7 (103-191)||(37237255-37237343)
chr7 (114-196)||(3538604-3538686)
chr7 (103-192)||(13597143-13597232)
chr7 (107-191)||(9391519-9391603)
chr7 (132-196)||(19008926-19008990)
chr7 (103-191)||(27072684-27072772)
chr7 (103-191)||(27205541-27205629)
chr7 (142-196)||(43960940-43960994)
chr7 (142-190)||(26005412-26005460)
chr7 (103-194)||(18788590-18788681)
chr7 (103-192)||(9392845-9392934)
chr7 (132-193)||(19016756-19016817)
chr7 (105-186)||(32518426-32518507)
chr7 (1-77)||(9357705-9357781)
chr7 (115-187)||(12630507-12630579)
chr7 (125-192)||(7011632-7011699)
chr7 (125-192)||(7026990-7027057)
chr7 (103-193)||(37235811-37235901)
chr7 (143-196)||(13599268-13599321)
chr7 (1-188)||(45398545-45398732)
chr7 (125-190)||(18787149-18787214)
chr7 (103-192)||(44230426-44230515)
chr7 (103-188)||(45400040-45400125)
chr7 (1-73)||(13597280-13597352)
chr7 (1-81)||(44417586-44417666)
chr7 (154-201)||(8661668-8661715)
chr7 (142-173)||(44230505-44230536)
chr7 (150-192)||(42612618-42612660)
chr7 (143-192)||(13749062-13749111)
chr7 (1-78)||(19217759-19217836)
chr7 (143-188)||(44746729-44746774)
chr7 (146-191)||(44748576-44748621)
chr7 (1-81)||(18787277-18787357)
chr7 (5-73)||(22794238-22794306)
chr7 (135-191)||(24653733-24653789)
chr7 (143-191)||(43115097-43115144)
chr7 (1-81)||(44748472-44748552)
[»] chr8 (30 HSPs)
chr8 (1-193)||(3714448-3714640)
chr8 (1-191)||(43133977-43134167)
chr8 (1-193)||(22013168-22013359)
chr8 (1-192)||(22012156-22012346)
chr8 (1-191)||(3713063-3713251)
chr8 (103-196)||(9244060-9244153)
chr8 (103-191)||(26364741-26364829)
chr8 (105-193)||(9245463-9245552)
chr8 (103-195)||(43584404-43584496)
chr8 (105-193)||(20308921-20309009)
chr8 (105-193)||(21095554-21095642)
chr8 (105-192)||(41636830-41636917)
chr8 (103-189)||(34642667-34642753)
chr8 (132-188)||(30640801-30640857)
chr8 (103-190)||(522127-522214)
chr8 (115-191)||(41638194-41638270)
chr8 (142-191)||(26366263-26366312)
chr8 (103-191)||(20310082-20310170)
chr8 (103-191)||(21096715-21096803)
chr8 (1-81)||(41636960-41637040)
chr8 (103-188)||(30644734-30644819)
chr8 (103-191)||(31202966-31203054)
chr8 (143-188)||(43586014-43586059)
chr8 (1-81)||(30640926-30641006)
chr8 (114-190)||(34644001-34644076)
chr8 (142-173)||(41638161-41638192)
chr8 (143-172)||(26364820-26364849)
chr8 (1-81)||(9245340-9245420)
chr8 (148-196)||(38665941-38665989)
chr8 (224-268)||(42855060-42855104)
[»] chr4 (38 HSPs)
chr4 (1-194)||(34122730-34122923)
chr4 (1-193)||(48462912-48463104)
chr4 (3-192)||(34121298-34121487)
chr4 (103-196)||(38031163-38031256)
chr4 (103-193)||(7261573-7261663)
chr4 (103-192)||(8815387-8815476)
chr4 (103-188)||(17357893-17357978)
chr4 (107-194)||(22621864-22621951)
chr4 (103-191)||(10802889-10802977)
chr4 (103-191)||(38032450-38032538)
chr4 (132-193)||(10804254-10804315)
chr4 (103-190)||(23758001-23758088)
chr4 (1-193)||(48462140-48462331)
chr4 (103-192)||(17356360-17356449)
chr4 (98-192)||(18091579-18091673)
chr4 (103-196)||(8814130-8814223)
chr4 (103-192)||(34095689-34095778)
chr4 (114-191)||(35191817-35191894)
chr4 (105-173)||(48081562-48081630)
chr4 (103-191)||(56233724-56233812)
chr4 (103-191)||(56235050-56235138)
chr4 (116-194)||(48080267-48080345)
chr4 (142-196)||(48081396-48081450)
chr4 (103-188)||(48499367-48499452)
chr4 (152-191)||(22624389-22624428)
chr4 (125-188)||(48081642-48081705)
chr4 (103-189)||(35193226-35193312)
chr4 (145-187)||(48501395-48501437)
chr4 (1-66)||(35927025-35927090)
chr4 (1-81)||(17356490-17356570)
chr4 (1-73)||(23757879-23757951)
chr4 (115-170)||(5433449-5433504)
chr4 (142-173)||(35193205-35193236)
chr4 (142-173)||(48501332-48501363)
chr4 (137-195)||(5470214-5470272)
chr4 (107-160)||(22623177-22623230)
chr4 (145-173)||(48080348-48080376)
chr4 (17-81)||(48499493-48499557)
[»] chr6 (21 HSPs)
chr6 (1-191)||(29477759-29477949)
chr6 (1-191)||(18574222-18574411)
chr6 (103-193)||(11801372-11801462)
chr6 (103-192)||(18572884-18572973)
chr6 (103-192)||(32349067-32349156)
chr6 (114-191)||(34995352-34995429)
chr6 (103-191)||(3000823-3000911)
chr6 (103-192)||(32713913-32714002)
chr6 (105-193)||(32347806-32347894)
chr6 (103-195)||(34996791-34996883)
chr6 (103-192)||(29479224-29479313)
chr6 (142-196)||(32712350-32712404)
chr6 (1-81)||(21094534-21094614)
chr6 (1-73)||(21095288-21095360)
chr6 (145-188)||(19383219-19383262)
chr6 (142-173)||(29479203-29479234)
chr6 (143-192)||(19761941-19761990)
chr6 (147-192)||(27719734-27719779)
chr6 (4-73)||(27719872-27719941)
chr6 (1-81)||(11801251-11801331)
chr6 (142-170)||(34995432-34995460)
[»] chr2 (15 HSPs)
chr2 (1-192)||(5034744-5034935)
chr2 (17-191)||(5033478-5033652)
chr2 (1-192)||(16604118-16604308)
chr2 (103-194)||(23833900-23833991)
chr2 (103-194)||(27892366-27892457)
chr2 (103-193)||(27891104-27891194)
chr2 (103-191)||(16602725-16602813)
chr2 (86-190)||(19577339-19577443)
chr2 (103-192)||(38243985-38244074)
chr2 (114-191)||(23832968-23833045)
chr2 (103-191)||(43814521-43814609)
chr2 (103-189)||(26388220-26388306)
chr2 (98-153)||(15496083-15496138)
chr2 (133-195)||(43814641-43814703)
chr2 (143-173)||(43814599-43814629)
[»] chr1 (33 HSPs)
chr1 (103-196)||(52086622-52086715)
chr1 (103-196)||(51693142-51693235)
chr1 (1-192)||(18820684-18820875)
chr1 (103-190)||(25181502-25181589)
chr1 (103-196)||(51468334-51468427)
chr1 (103-192)||(7110225-7110314)
chr1 (125-193)||(40187601-40187669)
chr1 (103-185)||(50485026-50485108)
chr1 (103-191)||(17244175-17244263)
chr1 (131-192)||(1823350-1823411)
chr1 (114-191)||(5488908-5488985)
chr1 (103-192)||(17245694-17245783)
chr1 (105-192)||(18819261-18819348)
chr1 (98-192)||(52759362-52759456)
chr1 (103-188)||(45229633-45229718)
chr1 (103-192)||(51468931-51469020)
chr1 (131-194)||(50483508-50483570)
chr1 (142-205)||(52761605-52761668)
chr1 (103-176)||(38235179-38235252)
chr1 (103-190)||(5488502-5488589)
chr1 (103-181)||(7111505-7111583)
chr1 (125-187)||(47532961-47533023)
chr1 (147-196)||(40723110-40723159)
chr1 (134-183)||(45228283-45228332)
chr1 (1-81)||(52761505-52761585)
chr1 (135-194)||(21202960-21203019)
chr1 (14-81)||(40187731-40187798)
chr1 (142-173)||(51693225-51693256)
chr1 (143-173)||(5488579-5488609)
chr1 (114-168)||(52087815-52087869)
chr1 (132-189)||(47533913-47533970)
chr1 (1-78)||(51693279-51693356)
chr1 (142-170)||(45228356-45228384)
[»] chr5 (23 HSPs)
chr5 (103-192)||(12373751-12373840)
chr5 (103-192)||(18654295-18654384)
chr5 (103-196)||(12372309-12372402)
chr5 (103-196)||(13276814-13276907)
chr5 (103-192)||(39350675-39350764)
chr5 (103-191)||(8447077-8447165)
chr5 (105-193)||(18655684-18655772)
chr5 (103-194)||(19230103-19230194)
chr5 (103-203)||(35952466-35952566)
chr5 (103-191)||(39349480-39349568)
chr5 (103-189)||(19228840-19228926)
chr5 (103-196)||(9083326-9083419)
chr5 (103-193)||(9081977-9082067)
chr5 (103-188)||(13278261-13278346)
chr5 (103-193)||(6801972-6802062)
chr5 (116-190)||(25001643-25001717)
chr5 (144-196)||(4031876-4031928)
chr5 (131-191)||(6803682-6803742)
chr5 (1-72)||(13278140-13278211)
chr5 (103-196)||(39164056-39164144)
chr5 (14-73)||(4031958-4032017)
chr5 (132-192)||(1012120-1012180)
chr5 (1-81)||(19229982-19230062)
[»] scaffold0878 (1 HSPs)
scaffold0878 (103-193)||(3057-3147)
[»] scaffold0141 (2 HSPs)
scaffold0141 (103-196)||(35315-35408)
scaffold0141 (103-191)||(31033-31121)
[»] scaffold0049 (2 HSPs)
scaffold0049 (103-196)||(79404-79497)
scaffold0049 (103-191)||(83691-83779)
[»] scaffold1425 (2 HSPs)
scaffold1425 (105-192)||(1633-1720)
scaffold1425 (105-193)||(132-220)
[»] scaffold0018 (1 HSPs)
scaffold0018 (105-191)||(25377-25463)
[»] scaffold0026 (1 HSPs)
scaffold0026 (103-195)||(104297-104389)
[»] scaffold0035 (1 HSPs)
scaffold0035 (132-196)||(21131-21195)
[»] scaffold0349 (2 HSPs)
scaffold0349 (147-192)||(9156-9201)
scaffold0349 (4-73)||(9294-9363)


Alignment Details
Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 34015696 - 34015890
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  34015696 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaattgaacgatctcctttttgaggggatcacattgattaacgaaaga 34015795  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||| |||||| || ||||||||||||||||    
T  34015796 tgagttaaaggatgtgtttgcgacatttatgacttatgggaccaaattgaataaaagaaataacttaagggaccgacaaatcaattaagcctaaa 34015890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 34014698 - 34014507
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||| |||||||||||   ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||||| ||||     
T  34014698 aagtaagtcaatcaggtgggtgtgatacaccataagatctggtagatttcccttatccaacgatctcctttttgaggggatcacattgattaacaaaagg 34014599  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34014598 tgagttaagggatgtgtttgcgacagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcct 34014507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 24376365 - 24376547
Alignment:
Q  10 aatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaag 109  Q
    ||||||||||||||||||||  |||||||||||||||| || || ||| ||||||||| |||||||||||||||| || ||||| || || |||||||||    
T  24376365 aatcaggtgttggtgatacattataagatctggtagacctctcttatccaacgatctcttttttgaggggatcacattaattaatgataggtgagttaag 24376464  T
Q  110 ggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||| ||| ||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24376465 ggatgtgtttgtgactgttaaaacttatgagaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 24376547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 53101731 - 53101545
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||| | ||||||||||||||| |||||||||||||||| ||| | |||||||||||||  |||||| |||| ||| |||||||||||  |     
T  53101731 aagtaaataaattaagtgttggtgatacactataagatctggtagacatcctttatcgaacgatctctattttgaagggaccacgttgattaacgacggg 53101632  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    ||| |||||||    |||||| | | ||| || |||| || |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  53101631 tga-ttaaggggccagtttgctaaaattaagagttataggcccaaattgaataaaag-aataaattaaaggaccggcagatcaattaag 53101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 23091279 - 23091186
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||| || ||||||| || ||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23091279 agttaagagacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaaaagaccggcagatcaattaagcctaaaa 23091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 28777717 - 28777810
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || ||||| ||||||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  28777717 agttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcctaaaa 28777810  T

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Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 31937119 - 31937034
Alignment:
Q  107 aagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||| ||||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31937119 aagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcct 31937034  T

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Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 31938337 - 31938425
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31938337 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 31938425  T

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Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 27750428 - 27750550
Alignment:
Q  70 ttttgaggggatcaccttgattaacgaaagatgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaa 169  Q
    ||||||||||||||| || |||||| | ||| |||||||||||||||||||  | | |||  ||||||| | |||||||||||||||||||||| |||||    
T  27750428 ttttgaggggatcacgttaattaacaacagacgagttaagggatgtgtttgaaaaaattaaaacttatgagaccaaattgaataaaagaaataaattaaa 27750527  T
Q  170 ggaccggcagatcaattaagcct 192  Q
    |||| |||||||||||| |||||    
T  27750528 ggactggcagatcaattgagcct 27750550  T

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Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 23073404 - 23073493
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||  | |||| || ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23073404 agttaagggacatctttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 23073493  T

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Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 35759263 - 35759348
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||||||| ||||||| || ||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  35759263 ttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 35759348  T

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Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 54354421 - 54354512
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||||| ||||||| || ||||| |||||| ||| ||||||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  54354421 agttaagggacgtgtttgagaaagttaagacttaagggaccaaattaaataaaagaaataggttaagggaccggcagatcaattaagcctaa 54354512  T

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Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 21727998 - 21727908
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    ||||||||||  |||||| || ||||| |||||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  21727998 agttaagggacatgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttatgggaccggcagatcaattaagccta 21727908  T

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Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 43394084 - 43394170
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    |||||||||| || |||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43394084 agttaagggacgtctttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 43394170  T

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Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 52525389 - 52525475
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    |||||||||||||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| |||||| || ||||||||||    
T  52525389 agttaagggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacaaatcaattaag 52525475  T

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Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 54353111 - 54353021
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    ||||||||||  ||||||  | ||||| ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  54353111 agttaagggacatgtttgataaagttaagacttatgggatcaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagccta 54353021  T

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Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 17742323 - 17742416
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||    
T  17742323 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatgtattaagcctaaaa 17742416  T

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Target: chr3; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 19043643 - 19043736
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||    
T  19043643 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatgtattaagcctaaaa 19043736  T

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Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 46902419 - 46902334
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||| ||||||| || ||||| || ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  46902419 agttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaa 46902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 27749287 - 27749107
Alignment:
Q  10 aatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaag 109  Q
    ||||| ||||||||||||||| |||||||||| ||||  | | | ||| ||| |||||  ||||||||| |  || |||||||| || | ||||||||||    
T  27749287 aatcaagtgttggtgatacactataagatctgatagatcttctttatccaacaatctctattttgagggaacaacgttgattaatgacaaatgagttaag 27749188  T
Q  110 ggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    ||||  ||||  || ||||| |||||||| | | ||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  27749187 ggatacgtttaagaaagttaagacttatgtgactaaattgaataaaagacataagttaaggaaccggtagatcaattaagc 27749107  T

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Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 43392801 - 43392630
Alignment:
Q  15 ggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaagggatg 114  Q
    |||||||||| ||||| |||| ||||| ||||| || || |||  ||||||||||| ||||||||| ||  |||| |||   || || |||| ||||| |    
T  43392801 ggtgttggtggtacactataaaatctgatagacctcacttatccgacgatctccttcttgaggggaccaaattgaataaaagaa-ataagttcagggacg 43392703  T
Q  115 tgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaatta 187  Q
    || ||| || ||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||    
T  43392702 tgcttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaatta 43392630  T

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Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 2232688 - 2232601
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||| || |||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  2232688 ttaagggacgtatttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcct 2232601  T

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Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 17117431 - 17117518
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||| ||||||| || | ||| |||||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  17117431 ttaagggacgtgtttgagaaacttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcct 17117518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 37609409 - 37609322
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||| ||||| ||||||| || ||||| |||||||  | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37609409 agttgagggacgtgtttgagaaagttaagacttatatgaccaaattaaataaaagaaataagttaaaggaccggcagatcaattaagc 37609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 50881141 - 50881232
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||| ||||||| || ||||| |||||||| || |||||||||||||||||||||||||| |||||| || |||||||||||| ||||    
T  50881141 ttaagggacgtgtttgagaaagttaagacttatgtggtcaaattgaataaaagaaataagttaagggaccgacacatcaattaagccaaaaa 50881232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 17116290 - 17116200
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| ||||||| || | |||  ||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  17116290 agttaagggacgtgtttgagaaacttaacacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatcaattaagccta 17116200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 5691124 - 5691209
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||| ||||||| || | ||| |||||||| | | ||||||||||||||||||||||||| |||||||||||||||||||    
T  5691124 agttaagggacgtgtttgagaaaattaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaa 5691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 10979236 - 10979293
Alignment:
Q  134 ttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10979236 ttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 10979293  T

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Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 46986120 - 46986209
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| ||||||| || |||||||||||||||||||||| |||| || |||||| |||||||||||||    
T  46986120 agttaagggacgtgtttgagagagttaagacttattggaccaaattgaataaaagaaataaattaaggggccggcaaatcaattaagcct 46986209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 53764516 - 53764424
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||| ||| ||||||| || ||||| |||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  53764516 agttaaaggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaa-aaataagttaaaggaccggtagatcaattaaacctaaaa 53764424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 11348530 - 11348590
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11348530 acttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcct 11348590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 53101770 - 53101894
Alignment:
Q  70 ttttgaggggatcaccttgattaacgaaagatgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaa 169  Q
    ||||||||||| ||| ||||| ||||| |  |||||| |||||   |||||| | | ||| || |||| || |||||||||||||||||||||| ||||     
T  53101770 ttttgaggggaccacgttgatcaacgacatgtgagttgagggaccagtttgctaaaattaagaattataggaccaaattgaataaaagaaataacttaag 53101869  T
Q  170 ggaccggcagatcaattaagcctaa 194  Q
    |||||||||||||||||||||||||    
T  53101870 ggaccggcagatcaattaagcctaa 53101894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 53765996 - 53766083
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||||||||| ||||||| || | ||| |||||| ||  ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  53765996 agttaagggacgtgtttgagaaaattaagacttacggaaccaaattgaataaaagaaataagttaagggacccgcagatcaattaagc 53766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 188
Target Start/End: Complemental strand, 55209868 - 55209785
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||| ||||||| || |||||  ||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  55209868 ttaagggacgtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaagggaccggtagatcaattaa 55209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 2233335 - 2233423
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||||||  ||||||  | ||||| |||||||| | || |||||||||||||||||||||||| |||||| |||||||||||||||    
T  2233335 agttaagggacatgtttgacaaagttaagacttatgagaccgaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 2233423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 47429704 - 47429628
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  47429704 gtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggacatgcagatcaattaagc 47429628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 37610797 - 37610841
Alignment:
Q  144 aaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  37610797 aaattgaataaaagaaataagttaagggaccggcagatcaattaa 37610841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 23072248 - 23072063
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| |||| |||||||| | ||||| |||| ||||| ||||  || || |||  ||||||||||| ||||||||| ||  |||| |||   || |    
T  23072248 aagtaaataaatctggtgttggcggtacactataaaatctgatagatctcacttatccgacgatctccttcttgaggggaccaaattgaataaaagaa-a 23072150  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    | |||||||| | || |||| || ||||| |||||||||| |||||||||||||| ||||| | |||| ||||| |||||||||||||    
T  23072149 taagttaagg-acgtctttgagaaagttaagacttatgggaccaaattgaataaatgaaatgaattaagggaccagcagatcaattaa 23072063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 35758113 - 35758063
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||||||    
T  35758113 ccaaattgaataaaagaaataagttaagggaccggcagattgattaagcct 35758063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 196
Target Start/End: Original strand, 46903685 - 46903747
Alignment:
Q  134 ttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||| ||||||||||||||||||||||||||| |||| |  |||||||||||||| ||||    
T  46903685 ttatgggaccaaattgaataaaagaaataagttaagggactgaaagatcaattaagccaaaaa 46903747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 5689783 - 5689723
Alignment:
Q  133 cttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||| ||||||| ||||||||||||||| ||| ||| || |||||||||||||||||    
T  5689783 cttatgggaccaaatttaataaaagaaataagctaagggagcgacagatcaattaagccta 5689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 21729218 - 21729290
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccg 175  Q
    |||||||||| ||||||| || |||||  ||||||||| | |||||||||||||||||||| |||| ||||||    
T  21729218 agttaagggacgtgtttgagaaagttagaacttatgggactaaattgaataaaagaaataaattaagggaccg 21729290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 53178749 - 53178701
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  53178749 caaattgaataaaaaaaataagttaagggatcggcagatcaattaagcc 53178701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 53180845 - 53180920
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    ||||||| || ||||| |||||||| |  |||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  53180845 gtgtttgagaaagttacgacttatgagatcaaattgaataaaa-aaataagttaagggaccggcaaatcaattaagc 53180920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 50879580 - 50879517
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaa 168  Q
    |||||||| ||||||  || ||||| || ||||||| |||||||||||||||||||||||||||    
T  50879580 ttaagggacgtgtttaagaaagttaagatttatgggaccaaattgaataaaagaaataagttaa 50879517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 52521976 - 52521925
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||| ||||    
T  52521976 ccaaattgaattaaagaaataagttaagggaccagcagatcaattaaaccta 52521925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 11346861 - 11346808
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    ||||||| |||||||||||||| |||| |||||| |||||||||||||| ||||    
T  11346861 ccaaattaaataaaagaaataaattaagggaccgacagatcaattaagcataaa 11346808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 15290559 - 15290604
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||    
T  15290559 caaattaaataaaagaaataagttaagggaccgacagatcaattaa 15290604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31937244 - 31937164
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||  ||| ||||||||||||||||| |||| ||||| ||||| ||| ||||| |||| |||| ||||| |||||||    
T  31937244 aagtaaaaaaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggat 31937164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37610672 - 37610752
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| ||| ||||| |||| |||  ||||| |||||||    
T  37610672 aagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggat 37610752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 33113379 - 33113426
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    |||||||||||||||||||||| |||| ||| ||| ||||||||||||    
T  33113379 ccaaattgaataaaagaaataaattaagggatcggtagatcaattaag 33113426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 173
Target Start/End: Original strand, 46903633 - 46903664
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||||    
T  46903633 ccaaattgaataaaagaaataagttaaaggac 46903664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43393962 - 43394040
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgagggg 79  Q
    |||||||| ||| |||||||||||||||||  ||| ||||| ||||| ||| ||||| |||| |||| ||||| |||||    
T  43393962 aagtaaataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggg 43394040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 28776496 - 28776447
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||||||| |||||| ||||||||| |  |||||||||||||||    
T  28776496 caaattgaataaaaaaaataaattaaaggactgatagatcaattaagcct 28776447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 47431217 - 47431302
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||| | |||||||  | |||||  ||||||| | |||||||||||||||||||||| |||| |||| | || |||||||||    
T  47431217 agttaaggaacgtgtttgaaaaagttaaaacttatgagaccaaattgaataaaagaaataaattaagggactgacaaatcaattaa 47431302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 173
Target Start/End: Complemental strand, 53764535 - 53764506
Alignment:
Q  144 aaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||    
T  53764535 aaattgaataaaagaaataagttaaaggac 53764506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17741039 - 17740983
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatc 57  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| ||| |||||    
T  17741039 aagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatc 17740983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19042359 - 19042303
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatc 57  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| ||| |||||    
T  19042359 aagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatc 19042303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 46903533 - 46903613
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| ||||  ||||| ||| ||||| |||| |||  ||||| |||||||    
T  46903533 aagtaaataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacggtctttttttttaggggat 46903613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 52522135 - 52522079
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatc 57  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| ||| |||||    
T  52522135 aagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatc 52522079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 6e-56; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 10 - 192
Target Start/End: Complemental strand, 27071201 - 27071019
Alignment:
Q  10 aatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaag 109  Q
    |||||||||||||||||| |  |||||||||||||||| || || ||| |||||||||||||||||||||||||| || ||||| || || |||||||||    
T  27071201 aatcaggtgttggtgatatattataagatctggtagacctctcttatccaacgatctcctttttgaggggatcacattaattaatgataggtgagttaag 27071102  T
Q  110 ggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||| ||| ||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27071101 ggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcct 27071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 27207112 - 27207294
Alignment:
Q  10 aatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaag 109  Q
    |||||||||||||||||| |  |||||||||||||||| || || ||| |||||||||||||||||||||||||| || ||||| || || |||||||||    
T  27207112 aatcaggtgttggtgatatattataagatctggtagacctctcttatccaacgatctcctttttgaggggatcacattaattaatgataggtgagttaag 27207211  T
Q  110 ggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||| ||| ||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27207212 ggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcct 27207294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 26006680 - 26006862
Alignment:
Q  10 aatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaag 109  Q
    |||||| ||||||| |||||| |||||||||||||||  ||||| ||| |||||||||||||||||||||||||| || |||||||| || |||||||||    
T  26006680 aatcagatgttggtaatacactataagatctggtagatctcccttatccaacgatctcctttttgaggggatcacattaattaacgataggtgagttaag 26006779  T
Q  110 ggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||| || |||||  ||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  26006780 ggatgtgtttgtgatagttaaaacttatgggaccaaattgaacaaaagaaataagttaagggaccgacagatcaattaagcct 26006862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 45689055 - 45688867
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||| | ||||||||||||||| ||  |||||| ||||  ||||| ||| |||||||||  ||||||||||| ||  ||||||||||| | |    
T  45689055 aagtaaataaattaagtgttggtgatacactat--gatctgatagatctcccttatccaacgatctctattttgaggggaccatgttgattaacgacaaa 45688958  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||||||||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  45688957 tgagttaagggatgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 45688867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 42611625 - 42611433
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||| || ||| |||||||| |||||||||| ||||  | ||||||| |||||||||  ||||||| ||| ||  ||||||||| | | |    
T  42611625 aagtaaataaatcaagtattgatgatacactataagatctgatagatcttcctaatccaacgatctctattttgagaggaccatgttgattaactacaaa 42611526  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    ||||||||||  |||||||| || |||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42611525 tgagttaaggagtgtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 42611433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 34052218 - 34052067
Alignment:
Q  192 taaaacataatatcgattttgaatgtgaggttaaaaatacttacacttagttttcattgatttagagaggacatatgtagagaannnnnnnggaaatccc 291  Q
    ||||||||||||| || ||| ||||||| |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||       | |||||||    
T  34052218 taaaacataatattgactttaaatgtgatgttaaaaatacttacacttaatttttattgatttagagagaacatatgtagagaaattttttgaaaatccc 34052119  T
Q  292 catagaaaaaagctgttaggattacctatattctagtaaaaatggtagatta 343  Q
    |||||||||||| || | ||||| |||||||||||||||| |||||||||||    
T  34052118 catagaaaaaaggtggttggattgcctatattctagtaaagatggtagatta 34052067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 7057306 - 7057446
Alignment:
Q  49 tccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaagggatgtgtttgcgacagttatgacttatggggccaaatt 148  Q
    ||||| ||| |||||||||||||| | ||||||||| || |||| | | || |||||| ||||||||||||| ||| ||||  ||||||||| |||||||    
T  7057306 tcccttatccaacgatctcctttt-gtggggatcacattaattagccataggtgagttgagggatgtgtttgtgacggttaaaacttatgggaccaaatt 7057404  T
Q  149 gaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7057405 gaataaaagaaataagttaagggaccggcagatcaattaagc 7057446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 44231770 - 44231960
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaac-gaaag 99  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||| |  || ||| |||||||| ||||| | ||||| ||  ||||||||  | |||    
T  44231770 aagtaaataaatcaggtgttggtgatacactataaaatctggtagaccttacttatccaacgatcttcttttcgtggggaccatattgattaaaagtaag 44231869  T
Q  100 atgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
     |||||| |||||   |||||| | ||||| || ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  44231870 -tgagttgagggacaagtttgcaaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 44231960  T

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Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 29188062 - 29188152
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    |||||||| ||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29188062 ttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaaggaccggcagatcatttaagcctaaa 29188152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 44417545 - 44417443
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaacataat 202  Q
    |||||||||| ||||||| ||  |||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  44417545 agttaagggacgtgtttgagaatgttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaatataat 44417446  T
Q  203 atc 205  Q
    |||    
T  44417445 atc 44417443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 19217715 - 19217622
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||| ||| ||||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19217715 agttaatggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaa 19217622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 29186752 - 29186661
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||||| ||||||| || |||||  ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  29186752 agttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcctaa 29186661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 44420552 - 44420642
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  44420552 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggatcggcatatcaattaagccta 44420642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 3537514 - 3537429
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||| ||||||| || |||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  3537514 agttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 3537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 32519781 - 32519870
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||||||||||| || ||||| || ||||||| |||||||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  32519781 ttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaatttagcctaa 32519870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 48792531 - 48792438
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||||||  ||||||  | |||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48792531 agttaagggacatgtttgaaaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaa 48792438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 13750666 - 13750754
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || ||||| |||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13750666 agttaagggacgtgtttgagaaagttaagacttatgtgatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 13750754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 43962599 - 43962691
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    ||||||||||  |||||| || || || |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43962599 agttaagggacatgtttgagaaagctaagacttatgtgaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaa 43962691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 43113762 - 43113673
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || |||||  ||||||| | ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  43113762 agttaagggacgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcct 43113673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 48793546 - 48793635
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| |||||||  | ||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||||    
T  48793546 agttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataagttaagggaccggcaaatcaattaagcct 48793635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 37237255 - 37237343
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||||||||||| || ||||| |||||||| | ||||||| |||||||||||||| |||| |||| |||||||||||||||||    
T  37237255 agttaagggatgtgtttgagagagttaagacttatgagaccaaattaaataaaagaaataaattaagggacgggcagatcaattaagcc 37237343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 3538604 - 3538686
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  3538604 gtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcggatcaattaagccaaaaa 3538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 13597232 - 13597143
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||| ||||| ||||||| || ||||| ||||||| || ||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  13597232 agttcagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaatacgttaaaggatcggcagttcaattaagcct 13597143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 9391603 - 9391519
Alignment:
Q  107 aagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||| ||||||| || | ||| || |||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9391603 aagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 9391519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 19008990 - 19008926
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  19008990 acttatgggaccaaattgaaaaaaagaaataagttaagggaccgacagatcaattaagcctaaaa 19008926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 27072684 - 27072772
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||||||  |||||| || ||||| ||||||||||  ||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  27072684 agttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagcc 27072772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 27205629 - 27205541
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||||||  |||||| || ||||| ||||||||||  ||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  27205629 agttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacagatcaattaagcc 27205541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 43960994 - 43960940
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  43960994 ccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcctaaaa 43960940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 26005460 - 26005412
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26005460 ccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 26005412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 18788590 - 18788681
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    ||||||||||  |||||| || ||||| || |||| || ||| |||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  18788590 agttaagggacatgtttgagaaagttaagatttataggaccatattgaataaaagaaataaattaagggaccggcatatcaattaagcctaa 18788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 9392845 - 9392934
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||  |||||| || ||||| ||||||| ||   ||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  9392845 agttaagggacatgtttgagaaagttaagacttataggaataaattaaataaaagaaataagttaaaggaacggaagatcaattaagcct 9392934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 19016756 - 19016817
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    ||||||||| |||||||||| ||||||||||| |||| |||||| |||||||||||||||||    
T  19016756 acttatgggaccaaattgaaaaaaagaaataaattaagggaccgacagatcaattaagccta 19016817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 32518507 - 32518426
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaatt 186  Q
    |||||||| ||||||| || ||||| || ||||||| |||||||||||||||||||||| |||| ||||||  |||||||||    
T  32518507 ttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccgatagatcaatt 32518426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9357705 - 9357781
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgagg 77  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||| || |||||  || ||||| |||||||||||||    
T  9357705 aagtaaataaattaggtgttggtgatacactataagatctggtaaacctcccttttccaacgagctcctttttgagg 9357781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 12630579 - 12630507
Alignment:
Q  115 tgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaatta 187  Q
    |||||| || ||||| |||||||| | ||||||||||||||||| |||||||||||||||| || ||||||||    
T  12630579 tgtttgagaaagttaagacttatgagaccaaattgaataaaagacataagttaaaggaccgacatatcaatta 12630507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 7011699 - 7011632
Alignment:
Q  125 agttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||| |||||||| |  |||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  7011699 agttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaattaagcct 7011632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 7027057 - 7026990
Alignment:
Q  125 agttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||| |||||||| |  |||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  7027057 agttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacagatcaattaagcct 7026990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 37235901 - 37235811
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| | ||||| || ||||  || ||||||  ||||||| ||||||||||||||||||| ||||||||||  ||||||||||||    
T  37235901 agttaagggacgcgtttgagaaagttgggatttatggaaccaaattaaataaaagaaataagttaagggaccggcaggccaattaagccta 37235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 13599268 - 13599321
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||| ||||    
T  13599268 caaattgaataaaagaaataagttaaaggattggcagatcaattatgccaaaaa 13599321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 45398732 - 45398545
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||| || |||||||||||||| ||||||| || || || ||||| ||| || |||||||||||| |||||| ||  || ||||||   ||     
T  45398732 aagtaaataaattagatgttggtgatacactataagatttgataaacctcccttatccaatgatctccttttttaggggaccatttttattaacatcagg 45398633  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    | |||| ||||    |||||| | ||||| ||  |||||| |||||| |||  |||||| |||||||| |||||| ||||||||||||    
T  45398632 taagttgaggggccagtttgcaaaagttaagagctatgggaccaaatcgaaataaagaagtaagttaagggaccgacagatcaattaa 45398545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 18787214 - 18787149
Alignment:
Q  125 agttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    ||||| || ||||||| ||||||| || ||||||||||| |||| |||||| ||||||||||||||    
T  18787214 agttaagatttatgggaccaaattaaacaaaagaaataaattaagggaccgacagatcaattaagc 18787149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 44230515 - 44230426
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||| ||| ||| ||| || |||||  ||||||||  | ||||||||||||||||||||  ||| ||| |||||||||||||||||||    
T  44230515 agttaaaggacgtgattgagaaagttaaaacttatggaactaaattgaataaaagaaataatctaagggatcggcagatcaattaagcct 44230426  T

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Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 45400040 - 45400125
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||| |||||||| | ||||| || ||||| | ||||||  ||  ||| ||||||||||| |||||||||||||||||||    
T  45400040 agttaagggacgtgtttgcaaaagttaagagttatgagaccaaatcaaaataaacaaataagttaagggaccggcagatcaattaa 45400125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13597352 - 13597280
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctccttttt 73  Q
    |||||||| ||| ||||||||||||||||| |||| ||||  ||||| ||||||||| |||||| || |||||    
T  13597352 aagtaaataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttt 13597280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44417666 - 44417586
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| |||||||||||||| || |||| ||||| ||||| ||| ||||| ||| ||||| ||||| |||||||    
T  44417666 aagtaaataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggat 44417586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 8661715 - 8661668
Alignment:
Q  154 aaagaaataagttaaaggaccggcagatcaattaagcctaaaacataa 201  Q
    |||||| |||||||| |||||||| |||||||||||||||||| ||||    
T  8661715 aaagaattaagttaagggaccggctgatcaattaagcctaaaaaataa 8661668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 173
Target Start/End: Complemental strand, 44230536 - 44230505
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||||    
T  44230536 ccaaattgaataaaagaaataagttaaaggac 44230505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 42612618 - 42612660
Alignment:
Q  150 aataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||||||| |||||||||| ||| |||||||||||||    
T  42612618 aataaaagaaataaattaaaggacccgcatatcaattaagcct 42612660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 13749111 - 13749062
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||| |||| |||||||||||||  |||||| ||||||||||||||||    
T  13749111 caaattaaatataagaaataagttatgggaccgccagatcaattaagcct 13749062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19217836 - 19217759
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggg 78  Q
    |||||||| ||| ||||||||||||||||| |||| ||| | ||||| ||| ||||| |||| |||| ||||| ||||    
T  19217836 aagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttaggg 19217759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 44746774 - 44746729
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||||||| |||||||||||  ||||| ||||||||||||    
T  44746774 caaattgaataaaaaaaataagttaagagaccgacagatcaattaa 44746729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 44748576 - 44748621
Alignment:
Q  146 attgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||||||||||| |||| |||| |||||||| ||||||||    
T  44748576 attgaataaaagaaataaattaagggactggcagatcgattaagcc 44748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18787357 - 18787277
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| | |||||||||||||||||||| ||||| || || ||| ||||| |||| |||  ||||| |||||||    
T  18787357 aagtaaataaattaagtgttggtgatacaccataaaatctgataaacctccgtaatccaacggtctatttttttaggggat 18787277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 22794238 - 22794306
Alignment:
Q  5 aaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctccttttt 73  Q
    |||| |||||| |||||||||||||| || ||||||| ||||| ||  | ||| |||||||||||||||    
T  22794238 aaataaatcagatgttggtgatacacaattagatctgatagacctcatttatccaacgatctccttttt 22794306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 24653733 - 24653789
Alignment:
Q  135 tatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||| |||| || |||||||||| |||||||| |||||||  |||||||||||||    
T  24653733 tatgggaccaatttaaataaaagaattaagttaagggaccggaggatcaattaagcc 24653789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 43115097 - 43115144
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||||||||||||||||| |||||||  || ||||||||||||    
T  43115097 caaattgaataaaagaaataagtt-aaggaccatcacatcaattaagcc 43115144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44748472 - 44748552
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| | | ||||| |||  |||||||||  |||||||    
T  44748472 aagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggat 44748552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 9e-55; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 3714448 - 3714640
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||| ||||||||||||||| |||||||||| ||||  ||||| ||| |||||||||  ||||||||||| ||  |||||||||| ||||    
T  3714448 aagtaaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaacgatctctattttgaggggaccatgttgattaacggaaga 3714547  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||||||||||||| || |||||  ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  3714548 tgagttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagccta 3714640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 43133977 - 43134167
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||| ||||||||||||||| |||| ||||||||||| || || ||  ||| |||||  |||||| |||| ||| ||||||||| | |||    
T  43133977 aagtaaataaatcaagtgttggtgatacactataaaatctggtagacctctcttattcaacaatctctattttgatgggaccacgttgattaacaacaga 43134076  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||||||||||||  || |||||  | |||| || |||||||||||||||||||||||||||||||||| || ||||||||||||    
T  43134077 tgagttaagggatgtgtttaagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggaccgacatatcaattaagcc 43134167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 22013168 - 22013359
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||| || || ||| |||||||||||||||||||||| ||  |||||||||| |||     
T  22013168 aagtaaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctcctttttgaggggaccatattgattaacgtaag- 22013266  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||| |||||   |||||| | ||||| || ||||||| ||||| ||||  ||||||||||||||| ||||| |||| |||||||||||||    
T  22013267 tgagttgagggaccagtttgcaaaagttaagagttatgggaccaaactgaaataaagaaataagttaagggaccagcagttcaattaagccta 22013359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 22012346 - 22012156
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||| || || ||| |||||||||||||||||||||| ||  |||||||||| |||     
T  22012346 aagtaaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctcctttttgaggggaccatattgattaacgtaag- 22012248  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||| |||||   |||||| | ||||| || ||||| | ||||| ||||  ||||||||||||||| |||||| ||| ||||||||||||    
T  22012247 tgagttgagggaccagtttgcaaaagttaagagttatgagaccaaactgaaataaagaaataagttaagggaccgacagttcaattaagcct 22012156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 3713251 - 3713063
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||| ||||| ||||||||| |||||||||  ||||  ||||| ||| |||||||||  ||||||||||| ||| |||| |||||| | |    
T  3713251 aagtaaataaatcaagtgtttgtgatacactataagatctaatagatctcccttatccaacgatctctattttgaggggaccacgttgagtaacgacata 3713152  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||||||||||||| || |||||  |||||| |  ||||||| |||||||||||||| ||||  ||||| |||||||||||||||    
T  3713151 tgagttaagggatgtgtttgagaaagttaaaacttat-gaaccaaattaaataaaagaaataa-ttaagagaccgacagatcaattaagcc 3713063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 9244153 - 9244060
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || |||||  ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  9244153 agttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcctaaaa 9244060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 26364829 - 26364741
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||| ||||||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26364829 agttaaaggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 26364741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 9245463 - 9245552
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagtt-aaaggaccggcagatcaattaagccta 193  Q
    |||||||| ||||||| || ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  9245463 ttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaaaggaccggcagatcatttaagccta 9245552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 43584496 - 43584404
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    |||||||||| ||||||| || ||||| |||||||| |  |||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  43584496 agttaagggacgtgtttgagaaagttaagacttatgagatcaaattgaataaaagaaataagttaatggaccgacagatcaattaagcctaaa 43584404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 20309009 - 20308921
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||| ||||||| || |||||  ||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20309009 ttaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaattaagccta 20308921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 21095642 - 21095554
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||| ||||||| || |||||  ||||||||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21095642 ttaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggaccggcagatcaattaagccta 21095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 41636917 - 41636830
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||| ||||||  || ||||| |||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  41636917 ttaagggacgtgttttagaaagttaagacttatgggaccaaattgaatgaaagaaataagtaaaaggaccggcaaatcaattaagcct 41636830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 34642753 - 34642667
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    |||||||||| ||||||| || ||||| |||||||  | |||||||||||||||||||||||||||  |||||||||||||||||||    
T  34642753 agttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataagttaagagaccggcagatcaattaag 34642667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 30640857 - 30640801
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  30640857 acttatgggaccaaattgaataaaagaaataagttaaaggaccggcatatcaattaa 30640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 522127 - 522214
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    ||||||||||  |||||| || ||||| |||||||||  ||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  522127 agttaagggacatgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccgacagattaattaagc 522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 41638194 - 41638270
Alignment:
Q  115 tgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||| || ||||| |||||||| |   ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41638194 tgtttgagaaagttaagacttatgagaataaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 41638270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 26366263 - 26366312
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  26366263 ccaaattaaataaaagaaataagttaaaggatcggcagatcaattaagcc 26366312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 20310082 - 20310170
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || | ||| |||||||| | ||||| ||||||||||||||||||||| ||||  |||||| |||||||||    
T  20310082 agttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaagaaataagttaagggacgagcagattaattaagcc 20310170  T

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Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 21096715 - 21096803
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || | ||| |||||||| | ||||| ||||||||||||||||||||| ||||  |||||| |||||||||    
T  21096715 agttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaagaaataagttaagggacgagcagattaattaagcc 21096803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41637040 - 41636960
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||||||| ||||| |||| |||| ||||| |||||||    
T  41637040 aagtaaataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggat 41636960  T

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Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 30644734 - 30644819
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    ||||||| || ||||||| || ||||| || ||||||| ||||||| |||||||||||||| |||| | |||| ||||||||||||    
T  30644734 agttaagagacgtgtttgagaaagttaagatttatgggaccaaattaaataaaagaaataaattaaggaaccgacagatcaattaa 30644819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 31203054 - 31202966
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || | ||| || ||||||| ||||| ||||||||||||||||||||| | | || ||||| |||||||||    
T  31203054 agttaagggacgtgtttgagaaacttaagatttatgggaccaaaatgaataaaagaaataagttaaggaaacgacagattaattaagcc 31202966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 43586014 - 43586059
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||    
T  43586014 caaattaaataaaagaaataagttaagggaccgacagatcaattaa 43586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30641006 - 30640926
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| || || ||||| ||| ||||| |||| |||| ||||| |||||||    
T  30641006 aagtaaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggat 30640926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 34644001 - 34644076
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    ||||||| || ||||| || ||||||| | |||||||||||||||||||||| || |||||| | ||||||||||||    
T  34644001 gtgtttgagaaagttaagatttatgggac-aaattgaataaaagaaataagtcaagggaccgacggatcaattaagc 34644076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 173
Target Start/End: Original strand, 41638161 - 41638192
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||||    
T  41638161 ccaaattgaataaaagaaataagttaaaggac 41638192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 172
Target Start/End: Complemental strand, 26364849 - 26364820
Alignment:
Q  143 caaattgaataaaagaaataagttaaagga 172  Q
    ||||||||||||||||||||||||||||||    
T  26364849 caaattgaataaaagaaataagttaaagga 26364820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9245340 - 9245420
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| ||   |||| |||| |||| ||||| |||||||    
T  9245340 aagtaaataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggat 9245420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 38665941 - 38665989
Alignment:
Q  148 tgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||| ||||||| ||||||||||||||||  ||||||||||||| ||||    
T  38665941 tgaacaaaagaattaagttaaaggaccgggtgatcaattaagccaaaaa 38665989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 42855104 - 42855060
Alignment:
Q  224 aaaaatacttacacttagttttcattgatttagagaggacatatg 268  Q
    ||||| ||||||||||||||||||||||||| |||| | ||||||    
T  42855104 aaaaagacttacacttagttttcattgatttggagaaggcatatg 42855060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 34122730 - 34122923
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||| ||||||||||||||| |||||||||| ||||  ||||| ||| |||| ||||  ||||||||||| ||| |||||||| || | |    
T  34122730 aagtaaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaacgttctctattttgaggggaccacgttgattaatgacaaa 34122829  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||||||||||||||| || ||||| || ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  34122830 tgagttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcctaa 34122923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 48462912 - 48463104
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||| |||||| |||||||  |||||||||| ||||  ||||||||| |||||||||  ||||||| ||| ||  |||||||||   | |    
T  48462912 aagtaaataaatcatgtgttgatgatacagtataagatctgatagatctccctaatccaacgatctctattttgagaggaccatgttgattaactgcata 48463011  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||||||||||||| || |||||  ||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  48463012 tgagttaagggatgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagccta 48463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 192
Target Start/End: Complemental strand, 34121487 - 34121298
Alignment:
Q  3 gtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatg 102  Q
    |||||| |||||  ||||||||||||||  |||| |||| ||||  ||||| ||| |||||||    ||||||||||| ||| || |||||    ||| |    
T  34121487 gtaaataaatcaaatgttggtgatacactgtaagctctgatagatctccctcatccaacgatcattattttgaggggaccacgttaattaatagcagacg 34121388  T
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||| |||||||||| || ||||| |||||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  34121387 agttaagtgatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcct 34121298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 38031256 - 38031163
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || ||||| ||||||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  38031256 agttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcctaaaa 38031163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 7261573 - 7261663
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| ||||||| || ||||| ||||||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7261573 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggtagatcaattaagccta 7261663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 8815387 - 8815476
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  8815387 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaacggaccggcaaatcaattaagcct 8815476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 17357893 - 17357978
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||| ||||||| || ||||| |||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17357893 agttaagggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaa 17357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 22621951 - 22621864
Alignment:
Q  107 aagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  22621951 aagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggactggcagatcaattaagcctaa 22621864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 10802977 - 10802889
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || |||||  | ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  10802977 agttaagggacgtgtttgagaaagttaaaatttatgggaccaaattgaataaaagaaataagttaagggatcggcagatcaattaagcc 10802889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 38032450 - 38032538
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || ||||| |||||||  | |||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  38032450 agttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 38032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 10804254 - 10804315
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10804254 acttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccta 10804315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 23758001 - 23758088
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||||||||| ||||||| || |||||  ||||||| | | |||||||||||||||||||| |||||| |||||||||||||||||||    
T  23758001 agttaagggacgtgtttgagaaagttaaaacttatgagactaaattgaataaaagaaataaattaaagaaccggcagatcaattaagc 23758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 48462331 - 48462140
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| |||||  |||||||||||||| ||||||| || ||||  ||||| ||| || ||||||  |||||| |||| ||| ||||||||||  | |    
T  48462331 aagtaaataaatcaaatgttggtgatacactataagatatgatagatctcccttatccaatgatctctattttgaagggaccacgttgattaacg--aca 48462234  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaat-tgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    ||| ||||| ||||||||||  | |||||  ||||||| | |||||| | |||||||||||||| ||||| |||| ||| ||||||||| ||||    
T  48462233 tgaattaagagatgtgtttgaaaaagttaaaacttatgagtccaaatattaataaaagaaataaattaaaagaccagcatatcaattaacccta 48462140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 17356449 - 17356360
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| || || |||   |||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  17356449 agttaagggacgtgtttgagaaagttaagatttctggcatcaaattgaataaaagaaataagttaagggaccgacagatcaattaagcct 17356360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 18091673 - 18091579
Alignment:
Q  98 agatgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||| |||||| ||| || |||| || ||||| ||||||||   ||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  18091673 agataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaattaagcct 18091579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 8814223 - 8814130
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||||||  |||||| || || || || ||||||| | ||||||||||||||||||||||||| ||||||  |||||||||||||| ||||    
T  8814223 agttaagggacatgtttgagaaagataagatttatgggactaaattgaataaaagaaataagttaagggaccgatagatcaattaagccgaaaa 8814130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 34095689 - 34095778
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||| ||||||||||| ||||    |||||||||||||||    
T  34095689 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggactaatagatcaattaagcct 34095778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 35191894 - 35191817
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||| || ||||| ||||||||   ||||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  35191894 gtgtttgagaaagttaagacttatgaaaccaaattgaataaaagaaataagttaagggaccggcgaatcaattaagcc 35191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 48081562 - 48081630
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggac 173  Q
    |||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||    
T  48081562 ttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggac 48081630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 56233812 - 56233724
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||||||  |||||| || ||||  |||||||| | ||||||||||||||||||||||||||| ||||||  ||||| ||||||||    
T  56233812 agttaagggacatgtttgagaaagttgagacttatgcgaccaaattgaataaaagaaataagttaagggaccgatagatctattaagcc 56233724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 56235050 - 56235138
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||||| ||||||||  | ||||| |||||||| |  ||||||||||||||||||||| |||| |||| | |||||||||||||||    
T  56235050 agttaaggggtgtgtttgataaagttaagacttatgagatcaaattgaataaaagaaataaattaagggactgacagatcaattaagcc 56235138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 48080345 - 48080267
Alignment:
Q  116 gtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    ||||| || ||||| ||||||||   ||||||| |||||||||||||||||||  ||||| ||||||||||||||||||    
T  48080345 gtttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagtgaccgacagatcaattaagcctaa 48080267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 48081396 - 48081450
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||    
T  48081396 ccaaattgaataaaaggaataagttaagggaccggcaaatcaattaaggctaaaa 48081450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 48499452 - 48499367
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    ||||||||||  ||||||  | ||||| || ||||||| ||||||||||||||||||||||||||| |   |||||||||||||||    
T  48499452 agttaagggacatgtttgaaaaagttaagaattatgggaccaaattgaataaaagaaataagttaaggtggcggcagatcaattaa 48499367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 22624389 - 22624428
Alignment:
Q  152 taaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  22624389 taaaagaaataagttaagggaccggcagatcaattaagcc 22624428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 48081642 - 48081705
Alignment:
Q  125 agttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    ||||| |||||||||  |||||||||||||||| |||||||||| |||||| || |||||||||    
T  48081642 agttaagacttatggaaccaaattgaataaaaggaataagttaagggaccgacacatcaattaa 48081705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 35193226 - 35193312
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    |||||| ||| ||||||| || ||||| |  ||||| | |||||||||||||||||||||| |||| |||| ||||| |||||||||    
T  35193226 agttaaaggacgtgtttgagaaagttaagttttatgagaccaaattgaataaaagaaataaattaagggactggcaggtcaattaag 35193312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 48501395 - 48501437
Alignment:
Q  145 aattgaataaaagaaataagttaaaggaccggcagatcaatta 187  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  48501395 aattgaataaaagaaataagttaaagaaccgacagatcaatta 48501437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35927025 - 35927090
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatct 66  Q
    |||||||| ||| ||||||||||||||||| |||| ||||||||||| | | ||||| ||||||||    
T  35927025 aagtaaataaattaggtgttggtgatacactataaaatctggtagaccttcgtaatccaacgatct 35927090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17356570 - 17356490
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||  ||||||||||||||||| |||| ||||| ||||| ||| ||||| |||| |||| ||||| |||||||    
T  17356570 aagtaaatgaactaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggat 17356490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23757879 - 23757951
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctccttttt 73  Q
    |||||||| ||| |||||||||||||||||||||| ||||| ||||| ||| ||||  |||| |||| |||||    
T  23757879 aagtaaataaattaggtgttggtgatacaccataaaatctgatagacctccgtaattcaacggtctctttttt 23757951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 5433449 - 5433504
Alignment:
Q  115 tgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaag 170  Q
    |||||| || |||||  |||||| || |||||||||||||||||||||||||||||    
T  5433449 tgtttgagaaagttaaaacttataggaccaaattgaataaaagaaataagttaaag 5433504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 173
Target Start/End: Original strand, 35193205 - 35193236
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||||    
T  35193205 ccaaattgaataaaagaaataagttaaaggac 35193236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 173
Target Start/End: Original strand, 48501332 - 48501363
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||||    
T  48501332 ccaaattgaataaaagaaataagttaaaggac 48501363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 5470214 - 5470272
Alignment:
Q  137 tggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    |||| |||| ||||||||| ||| |||||||| ||| |||||| |||||||||||||||    
T  5470214 tgggaccaacttgaataaatgaattaagttaagggatcggcagttcaattaagcctaaa 5470272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 22623177 - 22623230
Alignment:
Q  107 aagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaa 160  Q
    |||||| ||| ||| || ||||| |||||||||| |||||||||||||||||||    
T  22623177 aagggacgtgcttgagaaagttaagacttatgggaccaaattgaataaaagaaa 22623230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 48080376 - 48080348
Alignment:
Q  145 aattgaataaaagaaataagttaaaggac 173  Q
    |||||||||||||||||||||||||||||    
T  48080376 aattgaataaaagaaataagttaaaggac 48080348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 48499557 - 48499493
Alignment:
Q  17 tgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    ||||||||||||||| ||| ||||| ||||| ||  ||||| ||||||||| ||||| |||||||    
T  48499557 tgttggtgatacaccgtaaaatctgatagacctctgtaatccaacgatctctttttttaggggat 48499493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 29477949 - 29477759
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgatt-aacgaaag 99  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| || || ||| |||||||| ||||||||||||| ||  |||||| || | |||    
T  29477949 aagtaaataaatcaggtgttggtgatacaccataaaatctggtagacctcacttatccaacgatcttctttttgaggggaccatattgattaaaagtaag 29477850  T
Q  100 atgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
     |||||| |||||   |||||| | ||||| || ||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29477849 -tgagttgagggaccagtttgcaaaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 29477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 18574222 - 18574411
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| |||| |||||||||| ||||| |||| ||||| ||||| || || |||  ||||||||||| ||||||||| ||  |||| |||   || |    
T  18574222 aagtaaataaatccggtgttggtggtacactataaaatctgatagacctcacttatccgacgatctccttcttgaggggaccaaattgaataaaagaa-a 18574320  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    | |||| ||||| ||| ||| || ||||| |||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  18574321 taagttcagggacgtgcttgagaaagttaagacttatggaaccaaattgaataaaagaaataagtcaagggaccggcagatcaattaagcc 18574411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 11801372 - 11801462
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| ||||||| || ||||| ||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  11801372 agttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagccta 11801462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 18572973 - 18572884
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| || |||  || ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18572973 agttaagggacgtttttaagaaagttaagacttatgggaccaaattgaataaaagaaataagttaacggaccggcagatcaattaagcct 18572884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 32349067 - 32349156
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| |||||||  | |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  32349067 agttaagggacgtgtttgagaaagttaagacttataagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcct 32349156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 34995429 - 34995352
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||| || ||||| |||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34995429 gtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggaccgacagatcaattaagcc 34995352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 3000823 - 3000911
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || ||||| || ||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  3000823 agttaagggaggtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacaaatcaattaagcc 3000911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 32713913 - 32714002
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| || ||||||  ||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  32713913 agttaagggacgtgtttgagaaagttaagatttatggaaccaaactgaataaaagaaataagttacaggaccagcagatcaattaagcct 32714002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 32347894 - 32347806
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||| ||||||| || ||||| |||||||  | |||||||||||||||||||||| |||| | ||| ||||||||||||||||||    
T  32347894 ttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaaggaaccagcagatcaattaagccta 32347806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 34996791 - 34996883
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    |||||||||| || |||| || ||||| |||||||||| | ||||||||||||||||||||||| | |||||| || |||||||||| |||||    
T  34996791 agttaagggacgtatttgagaaagttaagacttatgggactaaattgaataaaagaaataagttcagggaccgacaaatcaattaagtctaaa 34996883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 29479224 - 29479313
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||| ||| ||| ||| || |||||  ||||||||| ||| |||||||||||||||||| |||| ||| |||||||||||||||||||    
T  29479224 agttaaaggacgtgattgagaaagttaaaacttatgggaccagattgaataaaagaaataatttaagggatcggcagatcaattaagcct 29479313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 32712404 - 32712350
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  32712404 ccaaactgaataaaagaaataagttaagggaccgacagatcaattaaacctaaaa 32712350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21094614 - 21094534
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| |||| |||||| ||| ||||| |||| |||| ||||| |||||||    
T  21094614 aagtaaataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacggtctctttttttaggggat 21094534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21095288 - 21095360
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctccttttt 73  Q
    |||||||| ||| ||||||||||||||||| |||| ||||||||||| ||| ||||| ||| ||||| |||||    
T  21095288 aagtaaataaattaggtgttggtgatacactataaaatctggtagacctccgtaatccaacaatctctttttt 21095360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 19383219 - 19383262
Alignment:
Q  145 aattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||||||||||||||||| |||||||| ||||||||||    
T  19383219 aattgaataaaagaaataagttaagggaccggcggatcaattaa 19383262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 173
Target Start/End: Original strand, 29479203 - 29479234
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||||    
T  29479203 ccaaattgaataaaagaaataagttaaaggac 29479234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 19761990 - 19761941
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||||||||||| ||||||| ||| || ||||| ||||||||||    
T  19761990 caaattgaataaaagaaacaagttaagggatcgacagatgaattaagcct 19761941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 27719779 - 27719734
Alignment:
Q  147 ttgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||| ||||||| |||||||||||||||| || ||||||||||||    
T  27719779 ttgaagaaaagaattaagttaaaggaccgggagttcaattaagcct 27719734  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 27719941 - 27719872
Alignment:
Q  4 taaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctccttttt 73  Q
    ||||| ||| ||||||||||||||||| |||| ||||| ||||| ||| ||||| |||| |||| |||||    
T  27719941 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttt 27719872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11801251 - 11801331
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| |||||||  |||||||| |||| || || ||||| ||| ||||| |||| |||| |||||||||||||    
T  11801251 aagtaaataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggat 11801331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 34995460 - 34995432
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaag 170  Q
    |||||||||||||||||||||||||||||    
T  34995460 ccaaattgaataaaagaaataagttaaag 34995432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 5034744 - 5034935
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||| |||||||||||||||  ||| ||||| ||||| || || ||| |||||||||  |||||| |||| ||| ||||||||| | ||     
T  5034744 aagtaaataaatcaagtgttggtgatacactctaaaatctgttagacctctcttatccaacgatctctattttgatgggaccacgttgattaacaacagg 5034843  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||||||||||||| || |||||  | |||| |  ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  5034844 tgagttaagggatgtgtttgagaaagttaaaagttatagaaccaaattaaataaaagaaataagttaaaggaccggcaaatcaattaagcct 5034935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 5033652 - 5033478
Alignment:
Q  17 tgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaagatgagttaagggatgtg 116  Q
    |||||||||||||| |||| ||||||||||  || || ||| |||||||||  ||||||||||| ||| ||||||||| | ||||||||||||||||||     
T  5033652 tgttggtgatacactataaaatctggtagatctctcttatccaacgatctctattttgaggggaccacgttgattaacaacagatgagttaagggatgta 5033553  T
Q  117 tttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||| || |||||  | |||| || |||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  5033552 tttgagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggactgacagatctattaagcc 5033478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 16604118 - 16604308
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaacgaaaga 100  Q
    |||||||| ||||  ||||||||| ||||| |||| ||||||||||| || || |||  ||||||||||| ||||||||| ||  |||| |||   || |    
T  16604118 aagtaaataaatccagtgttggtggtacactataaaatctggtagacctcacttatccgacgatctccttcttgaggggaccaaattgaataaaagaa-a 16604216  T
Q  101 tgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    | |||| ||||| ||| ||| || | ||| |||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  16604217 taagttcagggacgtgcttgagaaacttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcct 16604308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 23833900 - 23833991
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||||| ||||||| || ||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23833900 agttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaa 23833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 27892366 - 27892457
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||||| |||| || || ||||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27892366 agttaagggacgtgtctgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaa 27892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 27891194 - 27891104
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| ||||||| || ||||| ||| |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27891194 agttaagggacgtgtttgagaaagttaagacctatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccta 27891104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 16602813 - 16602725
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || ||||| |||||||||| |||||||||||||||||||||| |||| |||||| |||||||||||||||    
T  16602813 agttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccgacagatcaattaagcc 16602725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 19577339 - 19577443
Alignment:
Q  86 ttgattaacgaaagatgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaat 185  Q
    |||| |||||| ||||||| |||||||||| ||||  | ||||| || ||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||    
T  19577339 ttgactaacgatagatgagataagggatgtctttgttaaagttaagagttatgggaccaaattgactaaaagaaataagttaagggaccgggagatcaat 19577438  T
Q  186 taagc 190  Q
    |||||    
T  19577439 taagc 19577443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 38243985 - 38244074
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| |||||||  | ||||| |||||||||| ||||| |||||||||||||||| |||| |||||| ||||||||||||||||    
T  38243985 agttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataaattaagggaccgacagatcaattaagcct 38244074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 23833045 - 23832968
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||| || ||||| |||||||||| |||||| |||||||| ||||||||||| |||||| || ||||||||||||    
T  23833045 gtgtttgagaaagttaagacttatgggaccaaatggaataaaataaataagttaagggaccgacaaatcaattaagcc 23832968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 43814609 - 43814521
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||| ||| || |||| || ||||| |||||||| | | ||||||||||||||||||||||||| |||||| || ||||||||||||    
T  43814609 agttaaaggacgtatttgagaaagttaagacttatgagacgaaattgaataaaagaaataagttaagggaccgacaaatcaattaagcc 43814521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 26388306 - 26388220
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    |||||| ||| ||||||| || ||||| |||||||| |  |||||||||||||| |||||||||||  ||||| |||||||||||||    
T  26388306 agttaaaggacgtgtttgagaaagttaagacttatgagatcaaattgaataaaaaaaataagttaagagaccgacagatcaattaag 26388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 15496138 - 15496083
Alignment:
Q  98 agatgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaata 153  Q
    ||||||||||||||| ||||||| || ||||| |||||||||| ||||||||||||    
T  15496138 agatgagttaagggacgtgtttgtgaaagttaagacttatgggaccaaattgaata 15496083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 43814641 - 43814703
Alignment:
Q  133 cttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    |||||| | ||||||||||||||||||||| ||||  |||||| |||||||||||| ||||||    
T  43814641 cttatgagaccaaattgaataaaagaaatatgttaggggaccgacagatcaattaaacctaaa 43814703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 173
Target Start/End: Complemental strand, 43814629 - 43814599
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggac 173  Q
    |||||||||||||||||||||||||||||||    
T  43814629 caaattgaataaaagaaataagttaaaggac 43814599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 52086715 - 52086622
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || |||||  ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  52086715 agttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaa 52086622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 51693235 - 51693142
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||| ||| ||||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  51693235 agttaaaggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcctaaaa 51693142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 18820684 - 18820875
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggatcaccttgattaac-gaaag 99  Q
    |||||||| ||||||||||| ||||||||| || | |||| |||||| || || ||| ||||||||| |||||| ||||| ||  ||||||||  | |||    
T  18820684 aagtaaatgaatcaggtgttagtgatacactatcaaatctagtagacctcacttatccaacgatctcttttttgtggggaccatattgattaaaagtaag 18820783  T
Q  100 atgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
     |||||| |||||   |||||| | ||||| || ||||| | ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18820784 -tgagttgagggaccagtttgcaaaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcct 18820875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 25181589 - 25181502
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||||||||| ||||||| || ||||| ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25181589 agttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 25181502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 51468427 - 51468334
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  51468427 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggaccggcagatcaattaagccaaaaa 51468334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 7110314 - 7110225
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| ||||||| || ||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  7110314 agttaagggacgtgtttgagaaagttaagacttataggaccaaattaaataaaagaaataaattaagggaccggcagatcaattaagcct 7110225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 40187669 - 40187601
Alignment:
Q  125 agttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  40187669 agttaagacttatgggaccaaattgaataaaagaaataagtgaaaggaccgtcagatcaattaagccta 40187601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 50485026 - 50485108
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaat 185  Q
    |||||||||| ||||||| || ||||| |||||||| | |||||||||||||| |||||||||||| ||||||||||||||||    
T  50485026 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaatgaaataagttaagggaccggcagatcaat 50485108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 17244263 - 17244175
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || ||||  |||||||||| ||||||||||||||||||||||||||| | |||||||| | |||||||||    
T  17244263 agttaagggacgtgtttgagaaagttgagacttatgggaccaaattgaataaaagaaataagttaaggaaccggcaggttaattaagcc 17244175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 1823350 - 1823411
Alignment:
Q  131 gacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||| | | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1823350 gacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaagcct 1823411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 5488908 - 5488985
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    ||||||| || ||||| |||||||||| | ||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  5488908 gtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggatcggcggatcaattaagcc 5488985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 17245694 - 17245783
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||||||||  |||||| || ||||| |||||||| | |||||||||||||||||||||| |||| | |||||| ||||||||||||||    
T  17245694 agttaagggacttgtttgagagagttaagacttatgagaccaaattgaataaaagaaataaattaaggaaccggcggatcaattaagcct 17245783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 192
Target Start/End: Complemental strand, 18819348 - 18819261
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||| ||| ||| || ||||| ||||||||||  |||||||||||||| |||||| |||| | |||||||||||||||||||||    
T  18819348 ttaagggacgtgattgagaaagttaagacttatgggatcaaattgaataaaaaaaataatttaaggaaccggcagatcaattaagcct 18819261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 52759456 - 52759362
Alignment:
Q  98 agatgagttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||| |||||| ||| || |||| || ||||| ||||||||   ||||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  52759456 agataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagggatcggcagatcaattaagcct 52759362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 45229633 - 45229718
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||| ||||||| || | ||| || ||||| | |||||||||||||||||||||| |||| |||||| ||||||||||||    
T  45229633 agttaagggacgtgtttgagaaaattaagatttatgagaccaaattgaataaaagaaataaattaagggaccgacagatcaattaa 45229718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 51468931 - 51469020
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||| ||||| |||||||  | ||||| || ||||||| ||||||||||||||| ||||||||||| |||| | ||||||||||||||||    
T  51468931 agtttagggacgtgtttgaaaaagttaagatttatgggaccaaattgaataaaaaaaataagttaagggactgacagatcaattaagcct 51469020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 50483570 - 50483508
Alignment:
Q  131 gacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||| | |||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  50483570 gacttatgagaccaaattgaatacaagaaataagttaaa-gaccgacagatcaattaagcctaa 50483508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 52761605 - 52761668
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaacataatatc 205  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||| || |||||    
T  52761605 ccaaattgaataaaagaaataagttaaggaaccggcatatcaattaagccttaaatatgatatc 52761668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 38235179 - 38235252
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccgg 176  Q
    |||||||||| ||||||| || ||||| |||||||  | |||||||||||||||||||||| |||| |||||||    
T  38235179 agttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggaccgg 38235252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 5488589 - 5488502
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||||| ||| ||||||| || ||||| | |||||||   ||||||||||||||||||||| |||| |||||  ||||||||||||||    
T  5488589 agttaaaggacgtgtttgagaaagttaagtcttatggaatcaaattgaataaaagaaataaattaagggaccaacagatcaattaagc 5488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 7111505 - 7111583
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagat 181  Q
    |||||| ||| ||||||| || ||||| ||||||| || |||||||||||||||||||||| |||| | ||||| ||||    
T  7111505 agttaatggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaaggaaccgggagat 7111583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 47533023 - 47532961
Alignment:
Q  125 agttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaatta 187  Q
    ||||| || ||||| | ||||||||||||||| |||||| |||| ||||||||||||||||||    
T  47533023 agttaagatttatgagaccaaattgaataaaaaaaataacttaagggaccggcagatcaatta 47532961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 40723110 - 40723159
Alignment:
Q  147 ttgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||| ||||||| |||||||||||||||| || ||||||||||||||||    
T  40723110 ttgaaaaaaagaattaagttaaaggaccgggagttcaattaagcctaaaa 40723159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 45228332 - 45228283
Alignment:
Q  134 ttatggggccaaattgaataaaagaaataagttaaaggaccggcagatca 183  Q
    ||||||| | ||||| ||||||||||||||||||||| ||||||||||||    
T  45228332 ttatgggacaaaattaaataaaagaaataagttaaagaaccggcagatca 45228283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 52761505 - 52761585
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| |||  |||| |||| |||| ||||| |||||||    
T  52761505 aagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgcaatccaacggtctcttttttcaggggat 52761585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 21203019 - 21202960
Alignment:
Q  135 tatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||| |||||||||||| |||| || |||||||| ||||||| || ||||||||||||||    
T  21203019 tatgaggccaaattgaagaaaataattaagttaagggaccgggagttcaattaagcctaa 21202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 40187798 - 40187731
Alignment:
Q  14 aggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    ||||||||||||||||| |||| ||||| ||||| ||| ||||| |||| |||| ||||| |||||||    
T  40187798 aggtgttggtgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggat 40187731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 173
Target Start/End: Complemental strand, 51693256 - 51693225
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaaggac 173  Q
    ||||||||||||||||||||||||||||||||    
T  51693256 ccaaattgaataaaagaaataagttaaaggac 51693225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 173
Target Start/End: Complemental strand, 5488609 - 5488579
Alignment:
Q  143 caaattgaataaaagaaataagttaaaggac 173  Q
    |||||||||||||||||||||||||||||||    
T  5488609 caaattgaataaaagaaataagttaaaggac 5488579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 52087815 - 52087869
Alignment:
Q  114 gtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaa 168  Q
    ||||||| || ||||| ||| |||| | |||||||||||||||||||||||||||    
T  52087815 gtgtttgagaaagttaagacatatgagaccaaattgaataaaagaaataagttaa 52087869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 47533913 - 47533970
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    ||||||||| | ||||| |||||||||||||| ||||  |||| ||||||||||||||    
T  47533913 acttatgggactaaattaaataaaagaaataatttaagagaccagcagatcaattaag 47533970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51693356 - 51693279
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggg 78  Q
    |||||||| ||| ||||||||||||||||| |||| ||| | ||||| ||| ||||| |||| |||| ||||| ||||    
T  51693356 aagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttaggg 51693279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 45228384 - 45228356
Alignment:
Q  142 ccaaattgaataaaagaaataagttaaag 170  Q
    |||||||||||||||||||||||||||||    
T  45228384 ccaaattgaataaaagaaataagttaaag 45228356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 12373751 - 12373840
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| |||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12373751 agttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaaaggaccggcggatcaattaagcct 12373840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 18654384 - 18654295
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  18654384 agttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcct 18654295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 12372402 - 12372309
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    ||||||| || ||||||| || ||||| |||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  12372402 agttaagagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaacaaataagttaagggaccggcagatcaattaagcctaaaa 12372309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 13276907 - 13276814
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || | ||| || |||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13276907 agttaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcctaaaa 13276814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 39350675 - 39350764
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||||||||| ||||||| || ||||| |||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  39350675 agttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcatatcaattaagcct 39350764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 8447165 - 8447077
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||||| ||||||| || |||||  ||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  8447165 agttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 8447077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 18655684 - 18655772
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18655684 ttaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagccta 18655772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 19230103 - 19230194
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaa 194  Q
    |||||||||| ||||||| || ||||| ||||||| || |||||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  19230103 agttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggatcggcagatcaattaagcctaa 19230194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 35952466 - 35952566
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaacataat 202  Q
    |||||||||| | |||||  | ||||| || ||||| | |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  35952466 agttaagggacgcgtttgacaaagttaagatttatgagaccaaattgaataaaagaaataagttaaaggactgacagatcagttaagcctaaaacataat 35952565  T
Q  203 a 203  Q
    |    
T  35952566 a 35952566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 39349568 - 39349480
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||| ||| ||||||| || ||||| || ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39349568 agttaaaggacgtgtttgagaaagttaagagttatggaaccaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 39349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 19228926 - 19228840
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaag 189  Q
    |||||||| | ||||||| || ||||| ||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  19228926 agttaaggaacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggcagatcaattaag 19228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 9083326 - 9083419
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| ||||||| || ||||| |||||||||| |||||||||||||||||||| | ||||   |||||||||||||||||||| ||||    
T  9083326 agttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaatgaattaagaaaccggcagatcaattaagccaaaaa 9083419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 9082067 - 9081977
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| ||||||| || ||||| |||||||||   ||||||||||||||||||| |||||| | ||||| ||||||||||||||||    
T  9082067 agttaagggacgtgtttgagaaagttaagacttatggaatcaaattgaataaaagaaatgagttaaggaaccggtagatcaattaagccta 9081977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 13278261 - 13278346
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaa 188  Q
    |||||||||| ||||||| || ||||| |||||||| | ||||||||||||||| |||||| |||| |||||| ||||||||||||    
T  13278261 agttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataaattaagggaccgacagatcaattaa 13278346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 6802062 - 6801972
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| ||||||| || | ||| |||||||| | ||||||| || |||||||||||||||| ||||| ||||||||||||| ||||    
T  6802062 agttaagggacgtgtttgagaaaattaagacttatgagaccaaattaaaaaaaagaaataagttaagggaccagcagatcaattaaaccta 6801972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 25001717 - 25001643
Alignment:
Q  116 gtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagc 190  Q
    |||||||| ||||| ||||||||    ||||||||||||||||||||||||||||||||| || |||||||||||    
T  25001717 gtttgcgaaagttaagacttatgaaatcaaattgaataaaagaaataagttaaaggaccgacatatcaattaagc 25001643  T

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Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 4031928 - 4031876
Alignment:
Q  144 aaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  4031928 aaattgaataaaagaaataagttaagtgaccggcagatcaattaagccaaaaa 4031876  T

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Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 6803682 - 6803742
Alignment:
Q  131 gacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||| | ||||||| |||||||||||||| |||| |||||| |||||||||||||||    
T  6803682 gacttatgtgaccaaattaaataaaagaaataaattaagggaccgacagatcaattaagcc 6803742  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13278140 - 13278211
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttt 72  Q
    |||||||| ||| ||||||||||||||||| |||| ||||| ||||| ||||||||| |||| |||| ||||    
T  13278140 aagtaaataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctcttttt 13278211  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 39164144 - 39164056
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||||||||| |||||||  | ||||| |||||||| | | |||||||||||||     ||||||| ||||| |||||||||||||||||||||    
T  39164144 agttaagggacgtgtttgataaagttaagacttatgagactaaattgaataaaa-----aagttaatggaccagcagatcaattaagcctaaaa 39164056  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 4032017 - 4031958
Alignment:
Q  14 aggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctccttttt 73  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||  |||| |||| |||||    
T  4032017 aggtgttggtgatacactataaaatctggtagacttccgtaattcaacggtctctttttt 4031958  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 1012120 - 1012180
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||| |||| |||| || |||||||||| ||||||||||||||||  | ||||||||||||    
T  1012120 acttttgggaccaatttaaataaaagaattaagttaaaggaccgggtgttcaattaagcct 1012180  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19229982 - 19230062
Alignment:
Q  1 aagtaaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctcctttttgaggggat 81  Q
    |||||||| ||| | |||||| |||||||| |||| || || ||||| ||| ||||| |||| |||| |||||||||||||    
T  19229982 aagtaaataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggat 19230062  T

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Target: scaffold0878 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 3057 - 3147
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||||||||| |||| || || ||||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  3057 agttaagggacgtgtctgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggactggcagatcaattaagccta 3147  T

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Target: scaffold0141 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 35315 - 35408
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||| ||||| ||||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  35315 agttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaagccaaaaa 35408  T

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Target: scaffold0141; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 31121 - 31033
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||| ||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31121 agttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 31033  T

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Target: scaffold0049 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 79497 - 79404
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||| ||||| ||||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  79497 agttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaagccaaaaa 79404  T

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Target: scaffold0049; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 83691 - 83779
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||| ||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  83691 agttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 83779  T

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Target: scaffold1425 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 105 - 192
Target Start/End: Original strand, 1633 - 1720
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    |||| ||| ||||||| || ||||| |||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1633 ttaaaggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcct 1720  T

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Target: scaffold1425; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 220 - 132
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagccta 193  Q
    |||| ||| ||||||| || ||||| ||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  220 ttaaaggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggactggcagatcaattaagccta 132  T

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Target: scaffold0018 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 25377 - 25463
Alignment:
Q  105 ttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 191  Q
    |||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  25377 ttaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggagcggcagatcaattaagcc 25463  T

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Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 104389 - 104297
Alignment:
Q  103 agttaagggatgtgtttgcgacagttatgacttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaa 195  Q
    |||||||||| ||||||| ||  ||||  ||||||||| ||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  104389 agttaagggacgtgtttgagaatgttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccgtcaaatcaattaagcctaaa 104297  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 21195 - 21131
Alignment:
Q  132 acttatggggccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcctaaaa 196  Q
    |||| |||| |||| ||||||||||||| |||||||| |||||||  | ||||||||||||||||    
T  21195 acttttgggaccaatttgaataaaagaattaagttaagggaccgggcgttcaattaagcctaaaa 21131  T

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Target: scaffold0349 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 9201 - 9156
Alignment:
Q  147 ttgaataaaagaaataagttaaaggaccggcagatcaattaagcct 192  Q
    ||||| ||||||| |||||||||||||||| || ||||||||||||    
T  9201 ttgaagaaaagaattaagttaaaggaccgggagttcaattaagcct 9156  T

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Target: scaffold0349; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 9363 - 9294
Alignment:
Q  4 taaatcaatcaggtgttggtgatacaccataagatctggtagacttccctaatcgaacgatctccttttt 73  Q
    ||||| ||| ||||||||||||||||| |||| ||||| ||||| ||| ||||| |||| |||| |||||    
T  9363 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttt 9294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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