View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17037_low_8 (Length: 272)
Name: NF17037_low_8
Description: NF17037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17037_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 47913569 - 47913322
Alignment:
| Q |
9 |
gagatgaattcgtgaaacatgtttcgctatgcatagcattattctatttgaaattgatgtgatgtattcgcgattttaaaaagaattacggatatttttg |
108 |
Q |
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| T |
47913569 |
gagatgaattcgtgaaacatgtttcgctatgcatagcattattctatttgaaattgatgtgatgtattcgcaattttaaaaagaattatggatatttttg |
47913470 |
T |
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| Q |
109 |
ttttaaaatgaattaggtatgttttttaatattacaaaaaatatcttcaattaaatgacgagtaaggacctgaatgagagatcttgctcaaaaataacat |
208 |
Q |
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| T |
47913469 |
ttttaaaatgaattaggtatgttttttaatattacaaaaaatatcttcaattaaatgatgagtaaggacctgaatgagagatcttgctcaaaaataacat |
47913370 |
T |
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| Q |
209 |
ttaaaaacataatcaatactagacattcgttgataagaccctaatttt |
256 |
Q |
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| T |
47913369 |
ttaaaaacataaacaatactagacattcgttggtaagaccctaatttt |
47913322 |
T |
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