View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17038_low_3 (Length: 296)

Name: NF17038_low_3
Description: NF17038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17038_low_3
NF17038_low_3
[»] chr8 (51 HSPs)
chr8 (1-291)||(16875615-16875905)
chr8 (1-291)||(21848857-21849147)
chr8 (1-291)||(20650875-20651165)
chr8 (1-287)||(22436278-22436564)
chr8 (1-286)||(21195060-21195344)
chr8 (12-289)||(23155571-23155848)
chr8 (2-285)||(23902141-23902424)
chr8 (43-273)||(20394695-20394925)
chr8 (47-273)||(22988719-22988945)
chr8 (43-273)||(22422454-22422684)
chr8 (1-271)||(23887015-23887289)
chr8 (41-273)||(31569402-31569634)
chr8 (7-274)||(24631192-24631459)
chr8 (112-273)||(22131672-22131833)
chr8 (103-273)||(20016885-20017055)
chr8 (43-273)||(23652030-23652260)
chr8 (43-200)||(22376015-22376172)
chr8 (41-273)||(20008481-20008713)
chr8 (41-260)||(21323839-21324057)
chr8 (202-285)||(22317158-22317241)
chr8 (103-273)||(18858566-18858736)
chr8 (103-272)||(17672645-17672814)
chr8 (136-260)||(23656929-23657053)
chr8 (41-239)||(21927450-21927649)
chr8 (1-51)||(16414302-16414352)
chr8 (151-273)||(19114679-19114801)
chr8 (106-272)||(19482689-19482855)
chr8 (41-273)||(19861424-19861656)
chr8 (69-221)||(20390140-20390292)
chr8 (121-273)||(21252933-21253085)
chr8 (121-273)||(21392501-21392653)
chr8 (121-273)||(21783060-21783212)
chr8 (121-273)||(21786995-21787147)
chr8 (146-273)||(15535372-15535499)
chr8 (146-273)||(30311809-30311936)
chr8 (103-273)||(22118797-22118967)
chr8 (103-273)||(22127581-22127751)
chr8 (43-273)||(22246995-22247225)
chr8 (1-137)||(19869818-19869954)
chr8 (121-273)||(21920388-21920540)
chr8 (43-273)||(19979956-19980186)
chr8 (112-273)||(32602133-32602295)
chr8 (41-194)||(28982979-28983132)
chr8 (41-194)||(28988198-28988351)
chr8 (169-273)||(29302114-29302218)
chr8 (52-239)||(16269795-16269982)
chr8 (115-273)||(19864727-19864886)
chr8 (106-273)||(22041816-22041983)
chr8 (41-239)||(6605681-6605879)
chr8 (22-239)||(4984065-4984282)
chr8 (136-260)||(22052865-22052989)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-291)||(25330-25620)
[»] scaffold0162 (2 HSPs)
scaffold0162 (1-291)||(14844-15134)
scaffold0162 (1-291)||(11254-11544)
[»] chr7 (53 HSPs)
chr7 (1-291)||(7825794-7826084)
chr7 (1-291)||(27105860-27106150)
chr7 (1-291)||(27172175-27172465)
chr7 (1-287)||(4441826-4442112)
chr7 (1-285)||(17925550-17925834)
chr7 (1-285)||(13457935-13458219)
chr7 (1-285)||(15716989-15717273)
chr7 (1-267)||(17143362-17143628)
chr7 (1-273)||(48813338-48813609)
chr7 (12-101)||(13378969-13379058)
chr7 (190-286)||(14938245-14938341)
chr7 (190-286)||(15365838-15365934)
chr7 (41-273)||(19614588-19614820)
chr7 (112-273)||(11551299-11551460)
chr7 (104-273)||(11770430-11770599)
chr7 (41-273)||(14139592-14139824)
chr7 (115-273)||(12689414-12689572)
chr7 (41-254)||(11386533-11386746)
chr7 (41-273)||(15626437-15626669)
chr7 (41-273)||(19149124-19149356)
chr7 (41-273)||(20748523-20748755)
chr7 (41-260)||(12204904-12205123)
chr7 (41-274)||(14262349-14262581)
chr7 (112-273)||(14956466-14956627)
chr7 (58-274)||(15122170-15122384)
chr7 (41-273)||(23503974-23504206)
chr7 (103-273)||(11235401-11235571)
chr7 (41-263)||(13023280-13023502)
chr7 (103-273)||(14334308-14334478)
chr7 (103-273)||(15159245-15159415)
chr7 (41-253)||(13675385-13675597)
chr7 (41-273)||(18052057-18052289)
chr7 (107-273)||(8709517-8709683)
chr7 (115-273)||(15147085-15147243)
chr7 (103-272)||(44789539-44789708)
chr7 (124-271)||(15559-15706)
chr7 (163-254)||(16948698-16948789)
chr7 (103-273)||(16070461-16070631)
chr7 (41-263)||(26092902-26093124)
chr7 (115-200)||(14041680-14041765)
chr7 (115-200)||(14351710-14351795)
chr7 (93-273)||(10872602-10872782)
chr7 (41-260)||(15100707-15100926)
chr7 (41-263)||(11301317-11301539)
chr7 (41-239)||(13966772-13966970)
chr7 (41-239)||(26116694-26116892)
chr7 (41-263)||(49154224-49154446)
chr7 (1-137)||(39232-39368)
chr7 (103-200)||(13688026-13688123)
chr7 (103-260)||(14284542-14284699)
chr7 (112-239)||(12458587-12458714)
chr7 (170-260)||(15342357-15342447)
chr7 (217-273)||(8200540-8200596)
[»] chr6 (49 HSPs)
chr6 (1-291)||(16380595-16380885)
chr6 (1-291)||(16648191-16648481)
chr6 (1-291)||(1647036-1647326)
chr6 (1-290)||(23998018-23998307)
chr6 (1-291)||(16099778-16100074)
chr6 (1-291)||(14130238-14130528)
chr6 (64-287)||(23026010-23026233)
chr6 (128-291)||(18836257-18836420)
chr6 (168-289)||(18577980-18578101)
chr6 (168-291)||(19985805-19985928)
chr6 (190-291)||(16234797-16234898)
chr6 (190-285)||(21928979-21929074)
chr6 (114-273)||(22828690-22828849)
chr6 (58-271)||(23080258-23080471)
chr6 (41-273)||(19881085-19881317)
chr6 (61-273)||(34643868-34644080)
chr6 (1-188)||(23085993-23086180)
chr6 (103-272)||(2873127-2873296)
chr6 (113-273)||(18965629-18965789)
chr6 (41-260)||(14378178-14378397)
chr6 (41-260)||(14379728-14379947)
chr6 (103-274)||(24294106-24294277)
chr6 (95-273)||(18196049-18196227)
chr6 (41-254)||(18796496-18796709)
chr6 (1-273)||(18406166-18406438)
chr6 (106-273)||(16925965-16926132)
chr6 (58-273)||(20634219-20634434)
chr6 (103-273)||(5837543-5837713)
chr6 (122-271)||(22760798-22760947)
chr6 (112-272)||(28261530-28261690)
chr6 (112-272)||(28284226-28284386)
chr6 (112-272)||(28340279-28340439)
chr6 (113-272)||(25114340-25114499)
chr6 (106-273)||(27564160-27564327)
chr6 (41-239)||(24366233-24366431)
chr6 (103-260)||(19454824-19454981)
chr6 (1-273)||(19487504-19487766)
chr6 (16-112)||(14643721-14643817)
chr6 (121-273)||(25608203-25608355)
chr6 (106-273)||(16961809-16961976)
chr6 (1-40)||(23025968-23026007)
chr6 (41-263)||(28281075-28281297)
chr6 (16-273)||(18450290-18450547)
chr6 (41-260)||(25769644-25769863)
chr6 (103-263)||(10467173-10467333)
chr6 (217-272)||(27189224-27189279)
chr6 (217-272)||(27259961-27260016)
chr6 (103-273)||(19866474-19866644)
chr6 (146-254)||(19436808-19436916)
[»] chr5 (46 HSPs)
chr5 (1-291)||(21935447-21935737)
chr5 (1-288)||(24583032-24583319)
chr5 (1-291)||(23507503-23507793)
chr5 (190-291)||(23505063-23505164)
chr5 (1-273)||(20466358-20466630)
chr5 (43-273)||(23473082-23473312)
chr5 (16-273)||(21408992-21409246)
chr5 (41-273)||(17267633-17267865)
chr5 (115-271)||(22349776-22349932)
chr5 (41-273)||(21679077-21679309)
chr5 (103-272)||(40710636-40710805)
chr5 (103-254)||(22331248-22331399)
chr5 (58-273)||(25428288-25428503)
chr5 (103-273)||(14998100-14998270)
chr5 (103-273)||(37289857-37290027)
chr5 (103-271)||(19771817-19771985)
chr5 (106-273)||(27612209-27612376)
chr5 (103-273)||(22136523-22136693)
chr5 (43-273)||(26737028-26737258)
chr5 (106-272)||(27666854-27667020)
chr5 (124-273)||(16358357-16358506)
chr5 (43-200)||(21337595-21337752)
chr5 (124-273)||(34568349-34568498)
chr5 (146-273)||(18780969-18781096)
chr5 (41-263)||(14885290-14885512)
chr5 (103-257)||(20823306-20823460)
chr5 (103-273)||(22463788-22463958)
chr5 (103-273)||(27520261-27520431)
chr5 (103-273)||(29474434-29474604)
chr5 (103-273)||(41772697-41772867)
chr5 (1-114)||(20250543-20250656)
chr5 (121-273)||(20801252-20801404)
chr5 (52-239)||(20344153-20344340)
chr5 (52-263)||(22504526-22504737)
chr5 (103-254)||(27683761-27683912)
chr5 (41-194)||(24796696-24796849)
chr5 (174-266)||(20777757-20777849)
chr5 (174-273)||(28893374-28893473)
chr5 (174-273)||(28914845-28914944)
chr5 (174-273)||(28922200-28922299)
chr5 (174-273)||(28930113-28930212)
chr5 (41-263)||(25849922-25850144)
chr5 (41-194)||(21562323-21562476)
chr5 (151-239)||(24618704-24618792)
chr5 (151-239)||(24714935-24715023)
chr5 (151-239)||(24747963-24748051)
[»] chr3 (61 HSPs)
chr3 (1-291)||(8272715-8273005)
chr3 (1-291)||(30139340-30139630)
chr3 (1-291)||(30148891-30149181)
chr3 (1-291)||(13965668-13965959)
chr3 (1-291)||(15611637-15611927)
chr3 (1-291)||(25767852-25768142)
chr3 (1-291)||(6151169-6151459)
chr3 (1-251)||(15948786-15949036)
chr3 (190-291)||(12795770-12795871)
chr3 (133-272)||(6710865-6711004)
chr3 (194-286)||(16258682-16258774)
chr3 (190-290)||(18915261-18915361)
chr3 (190-284)||(55514237-55514331)
chr3 (41-273)||(14088225-14088457)
chr3 (43-273)||(15261172-15261402)
chr3 (41-273)||(13970465-13970697)
chr3 (41-260)||(11950253-11950472)
chr3 (103-273)||(15340811-15340981)
chr3 (103-273)||(15400935-15401105)
chr3 (41-260)||(17187939-17188158)
chr3 (214-291)||(18751477-18751554)
chr3 (52-273)||(41179074-41179295)
chr3 (93-273)||(20060462-20060642)
chr3 (41-188)||(11889636-11889783)
chr3 (103-273)||(13254232-13254402)
chr3 (103-272)||(15346663-15346832)
chr3 (136-260)||(12358967-12359091)
chr3 (58-273)||(15723307-15723522)
chr3 (107-273)||(16379339-16379505)
chr3 (112-273)||(6602278-6602439)
chr3 (112-273)||(10007142-10007303)
chr3 (112-273)||(10907752-10907913)
chr3 (41-230)||(15229198-15229387)
chr3 (41-230)||(15235066-15235255)
chr3 (112-273)||(16693706-16693867)
chr3 (41-273)||(13943576-13943808)
chr3 (1-273)||(15014072-15014344)
chr3 (93-273)||(15587800-15587980)
chr3 (121-273)||(17491392-17491544)
chr3 (146-260)||(12179903-12180017)
chr3 (41-263)||(28755880-28756102)
chr3 (124-273)||(16637315-16637464)
chr3 (136-273)||(16834950-16835087)
chr3 (124-273)||(48426989-48427138)
chr3 (112-272)||(5109038-5109198)
chr3 (112-272)||(12888252-12888412)
chr3 (121-273)||(14874935-14875087)
chr3 (41-273)||(44778799-44779031)
chr3 (41-263)||(11959514-11959736)
chr3 (103-273)||(16328067-16328237)
chr3 (106-272)||(53383439-53383605)
chr3 (157-274)||(16805419-16805536)
chr3 (112-272)||(3687486-3687646)
chr3 (107-191)||(55498486-55498570)
chr3 (113-272)||(5423358-5423517)
chr3 (103-254)||(10418452-10418603)
chr3 (190-284)||(13952283-13952377)
chr3 (41-194)||(47125575-47125728)
chr3 (117-186)||(55498665-55498734)
chr3 (103-239)||(10385257-10385393)
chr3 (22-254)||(13318828-13319060)
[»] chr1 (38 HSPs)
chr1 (1-291)||(20829541-20829831)
chr1 (1-273)||(20926992-20927264)
chr1 (1-284)||(41216005-41216288)
chr1 (1-116)||(20527148-20527263)
chr1 (1-284)||(21201028-21201311)
chr1 (1-59)||(22133905-22133963)
chr1 (103-274)||(51331744-51331915)
chr1 (41-239)||(21743741-21743939)
chr1 (103-273)||(21838888-21839058)
chr1 (112-273)||(19108306-19108467)
chr1 (103-272)||(33389280-33389449)
chr1 (58-273)||(20140021-20140236)
chr1 (103-273)||(21832240-21832410)
chr1 (106-239)||(20834154-20834287)
chr1 (1-273)||(21750878-21751150)
chr1 (106-273)||(430370-430537)
chr1 (103-273)||(20855011-20855181)
chr1 (53-271)||(21862574-21862792)
chr1 (41-263)||(31538186-31538408)
chr1 (106-272)||(41351916-41352082)
chr1 (41-263)||(48424852-48425074)
chr1 (41-263)||(52987720-52987942)
chr1 (136-273)||(41308611-41308748)
chr1 (100-273)||(50618646-50618819)
chr1 (112-272)||(16348856-16349016)
chr1 (121-273)||(24792885-24793037)
chr1 (115-273)||(21026111-21026269)
chr1 (112-273)||(17043275-17043436)
chr1 (41-194)||(37679097-37679250)
chr1 (136-260)||(20938347-20938471)
chr1 (146-273)||(21234025-21234152)
chr1 (174-263)||(24097925-24098014)
chr1 (106-254)||(19661390-19661538)
chr1 (121-273)||(22360513-22360665)
chr1 (115-271)||(22503552-22503708)
chr1 (256-287)||(22133961-22133992)
chr1 (106-260)||(19856256-19856410)
chr1 (146-260)||(23196543-23196657)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-291)||(42194-42484)
scaffold0076 (41-273)||(31797-32029)
[»] chr4 (34 HSPs)
chr4 (1-290)||(15291235-15291524)
chr4 (2-285)||(12340943-12341226)
chr4 (190-291)||(9292740-9292841)
chr4 (190-291)||(14999220-14999321)
chr4 (1-274)||(14696035-14696308)
chr4 (41-273)||(15323140-15323372)
chr4 (41-273)||(51604909-51605141)
chr4 (1-239)||(8707868-8708106)
chr4 (1-274)||(8322853-8323126)
chr4 (43-273)||(14849225-14849455)
chr4 (112-273)||(14682490-14682651)
chr4 (58-273)||(40474963-40475178)
chr4 (103-273)||(8051542-8051712)
chr4 (103-273)||(14301898-14302068)
chr4 (41-263)||(15072292-15072514)
chr4 (103-273)||(23957670-23957840)
chr4 (41-232)||(15001482-15001673)
chr4 (103-273)||(27713259-27713429)
chr4 (41-263)||(3262911-3263133)
chr4 (112-273)||(12478523-12478684)
chr4 (112-273)||(19776721-19776882)
chr4 (41-233)||(44659983-44660175)
chr4 (146-272)||(8388336-8388462)
chr4 (41-273)||(1647394-1647626)
chr4 (1-137)||(18547696-18547832)
chr4 (58-273)||(15145759-15145974)
chr4 (103-239)||(16149668-16149804)
chr4 (103-239)||(16153814-16153950)
chr4 (106-254)||(27902328-27902476)
chr4 (41-273)||(29451654-29451886)
chr4 (136-239)||(15357332-15357435)
chr4 (103-200)||(17093068-17093165)
chr4 (112-200)||(16234920-16235008)
chr4 (217-273)||(29037437-29037493)
[»] chr2 (41 HSPs)
chr2 (1-290)||(24829805-24830094)
chr2 (1-291)||(22279641-22279931)
chr2 (1-291)||(24568285-24568575)
chr2 (1-287)||(22760186-22760472)
chr2 (1-284)||(25130152-25130435)
chr2 (1-269)||(10037949-10038217)
chr2 (1-269)||(10098334-10098602)
chr2 (190-291)||(12639039-12639140)
chr2 (16-273)||(30010816-30011073)
chr2 (41-274)||(23112289-23112522)
chr2 (112-273)||(21143769-21143930)
chr2 (1-273)||(24818847-24819119)
chr2 (41-273)||(27789294-27789526)
chr2 (115-273)||(24875481-24875639)
chr2 (16-254)||(30209549-30209787)
chr2 (41-254)||(23098675-23098888)
chr2 (58-273)||(27372823-27373038)
chr2 (103-274)||(41607104-41607275)
chr2 (103-273)||(24711588-24711758)
chr2 (103-254)||(23295508-23295659)
chr2 (121-252)||(24950165-24950296)
chr2 (103-273)||(24263924-24264094)
chr2 (41-254)||(23278349-23278562)
chr2 (103-272)||(27219571-27219740)
chr2 (124-272)||(16926915-16927063)
chr2 (124-272)||(17000555-17000703)
chr2 (106-273)||(23106450-23106617)
chr2 (41-263)||(1065315-1065537)
chr2 (124-273)||(9485770-9485919)
chr2 (103-272)||(10870405-10870574)
chr2 (41-273)||(12575907-12576139)
chr2 (121-273)||(22734511-22734663)
chr2 (106-254)||(27208894-27209042)
chr2 (112-272)||(44384298-44384458)
chr2 (115-273)||(24706213-24706371)
chr2 (163-273)||(45534494-45534604)
chr2 (112-273)||(23189473-23189633)
chr2 (146-254)||(22323618-22323726)
chr2 (136-260)||(25264621-25264745)
chr2 (101-273)||(23073417-23073589)
chr2 (103-200)||(9337209-9337306)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-291)||(5886-6178)
scaffold0124 (146-260)||(14167-14281)
[»] scaffold0302 (2 HSPs)
scaffold0302 (1-291)||(7089-7379)
scaffold0302 (1-291)||(147-437)
[»] scaffold0077 (3 HSPs)
scaffold0077 (1-291)||(26346-26636)
scaffold0077 (190-235)||(25270-25315)
scaffold0077 (106-224)||(19819-19937)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-291)||(34021-34311)
[»] scaffold0022 (4 HSPs)
scaffold0022 (1-291)||(8906-9196)
scaffold0022 (100-273)||(55709-55882)
scaffold0022 (1-271)||(40588-40858)
scaffold0022 (1-271)||(74308-74578)
[»] scaffold0218 (2 HSPs)
scaffold0218 (5-291)||(2036-2322)
scaffold0218 (1-285)||(26270-26553)
[»] scaffold0266 (2 HSPs)
scaffold0266 (1-291)||(7941-8231)
scaffold0266 (41-260)||(16079-16298)
[»] scaffold0008 (4 HSPs)
scaffold0008 (1-291)||(132569-132859)
scaffold0008 (111-291)||(25762-25942)
scaffold0008 (1-56)||(25938-25993)
scaffold0008 (142-272)||(85451-85581)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-291)||(24112-24402)
scaffold0120 (58-273)||(7974-8189)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-291)||(7009-7299)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-287)||(15998-16284)
[»] scaffold0021 (3 HSPs)
scaffold0021 (3-291)||(7150-7438)
scaffold0021 (1-287)||(31503-31788)
scaffold0021 (1-240)||(21927-22165)
[»] scaffold0876 (2 HSPs)
scaffold0876 (1-291)||(1026-1316)
scaffold0876 (190-286)||(4475-4571)
[»] scaffold0692 (1 HSPs)
scaffold0692 (1-291)||(1964-2245)
[»] scaffold1488 (1 HSPs)
scaffold1488 (1-287)||(883-1168)
[»] scaffold0561 (1 HSPs)
scaffold0561 (1-281)||(7085-7361)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-231)||(103-333)
[»] scaffold0467 (1 HSPs)
scaffold0467 (1-188)||(1701-1888)
[»] scaffold0244 (2 HSPs)
scaffold0244 (168-291)||(25024-25147)
scaffold0244 (154-260)||(19319-19425)
[»] scaffold0635 (1 HSPs)
scaffold0635 (1-269)||(8853-9121)
[»] scaffold0269 (1 HSPs)
scaffold0269 (168-291)||(2200-2323)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-273)||(9114-9386)
[»] scaffold1486 (1 HSPs)
scaffold1486 (189-291)||(110-212)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-83)||(6888-6970)
[»] scaffold0023 (3 HSPs)
scaffold0023 (189-291)||(54210-54312)
scaffold0023 (52-274)||(2636-2858)
scaffold0023 (142-273)||(151064-151195)
[»] scaffold0310 (1 HSPs)
scaffold0310 (190-291)||(13093-13194)
[»] scaffold0074 (1 HSPs)
scaffold0074 (10-273)||(5066-5328)
[»] scaffold0011 (4 HSPs)
scaffold0011 (43-274)||(24655-24886)
scaffold0011 (214-291)||(181860-181937)
scaffold0011 (121-239)||(150557-150675)
scaffold0011 (170-260)||(193953-194043)
[»] scaffold0647 (2 HSPs)
scaffold0647 (16-273)||(2853-3110)
scaffold0647 (121-273)||(7859-8011)
[»] scaffold0730 (1 HSPs)
scaffold0730 (41-273)||(121-353)
[»] scaffold0445 (1 HSPs)
scaffold0445 (41-273)||(1969-2201)
[»] scaffold0029 (2 HSPs)
scaffold0029 (41-273)||(114513-114745)
scaffold0029 (112-273)||(108002-108163)
[»] scaffold0058 (2 HSPs)
scaffold0058 (10-273)||(27337-27599)
scaffold0058 (79-284)||(76366-76571)
[»] scaffold0335 (1 HSPs)
scaffold0335 (190-291)||(10979-11080)
[»] scaffold0037 (1 HSPs)
scaffold0037 (112-273)||(115172-115333)
[»] scaffold0293 (1 HSPs)
scaffold0293 (52-272)||(14423-14643)
[»] scaffold0028 (6 HSPs)
scaffold0028 (41-273)||(48634-48866)
scaffold0028 (115-291)||(16872-17048)
scaffold0028 (115-291)||(10410-10586)
scaffold0028 (112-272)||(45106-45266)
scaffold0028 (240-291)||(104892-104943)
scaffold0028 (205-244)||(94054-94093)
[»] scaffold0379 (1 HSPs)
scaffold0379 (46-273)||(6014-6241)
[»] scaffold0001 (3 HSPs)
scaffold0001 (43-266)||(494979-495202)
scaffold0001 (1-239)||(453293-453531)
scaffold0001 (163-263)||(515595-515695)
[»] scaffold0585 (1 HSPs)
scaffold0585 (41-239)||(5209-5407)
[»] scaffold0102 (3 HSPs)
scaffold0102 (190-284)||(46682-46776)
scaffold0102 (1-239)||(41685-41922)
scaffold0102 (103-200)||(51527-51624)
[»] scaffold0007 (2 HSPs)
scaffold0007 (58-264)||(84656-84862)
scaffold0007 (106-273)||(268562-268729)
[»] scaffold1602 (1 HSPs)
scaffold1602 (1-273)||(147-419)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-273)||(10821-11093)
scaffold0018 (1-273)||(17013-17285)
[»] scaffold0080 (3 HSPs)
scaffold0080 (106-273)||(11424-11591)
scaffold0080 (121-273)||(50044-50196)
scaffold0080 (121-200)||(53662-53741)
[»] scaffold0282 (1 HSPs)
scaffold0282 (43-273)||(14601-14831)
[»] scaffold0016 (1 HSPs)
scaffold0016 (41-239)||(176464-176662)
[»] scaffold0010 (2 HSPs)
scaffold0010 (47-273)||(3868-4094)
scaffold0010 (41-263)||(40453-40675)
[»] scaffold0040 (1 HSPs)
scaffold0040 (43-228)||(16876-17061)
[»] scaffold0431 (1 HSPs)
scaffold0431 (115-291)||(9302-9478)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-273)||(103187-103459)
[»] scaffold0122 (1 HSPs)
scaffold0122 (58-273)||(38085-38300)
[»] scaffold0079 (1 HSPs)
scaffold0079 (41-260)||(2683-2902)
[»] scaffold0509 (1 HSPs)
scaffold0509 (43-273)||(10782-11012)
[»] scaffold0342 (1 HSPs)
scaffold0342 (43-273)||(15343-15573)
[»] scaffold0149 (2 HSPs)
scaffold0149 (58-260)||(5487-5689)
scaffold0149 (58-260)||(9918-10120)
[»] scaffold0138 (1 HSPs)
scaffold0138 (43-273)||(7209-7439)
[»] scaffold0042 (2 HSPs)
scaffold0042 (45-271)||(22661-22887)
scaffold0042 (115-273)||(38014-38172)
[»] scaffold0404 (1 HSPs)
scaffold0404 (103-260)||(6717-6874)
[»] scaffold2004 (1 HSPs)
scaffold2004 (58-273)||(946-1161)
[»] scaffold1830 (1 HSPs)
scaffold1830 (42-273)||(948-1179)
[»] scaffold0621 (1 HSPs)
scaffold0621 (58-273)||(3386-3601)
[»] scaffold0454 (1 HSPs)
scaffold0454 (103-273)||(8892-9062)
[»] scaffold0190 (1 HSPs)
scaffold0190 (41-263)||(31439-31661)
[»] scaffold0108 (1 HSPs)
scaffold0108 (41-239)||(49092-49290)
[»] scaffold0054 (1 HSPs)
scaffold0054 (46-260)||(64633-64847)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-194)||(201548-201741)
scaffold0004 (136-260)||(324671-324795)
[»] scaffold0575 (1 HSPs)
scaffold0575 (1-273)||(3535-3807)
[»] scaffold0309 (2 HSPs)
scaffold0309 (41-241)||(11779-11979)
scaffold0309 (43-273)||(16595-16825)
[»] scaffold0206 (1 HSPs)
scaffold0206 (106-254)||(25086-25234)
[»] scaffold0126 (1 HSPs)
scaffold0126 (103-239)||(42905-43041)
[»] scaffold0090 (2 HSPs)
scaffold0090 (41-273)||(20803-21035)
scaffold0090 (41-273)||(24965-25197)
[»] scaffold0304 (1 HSPs)
scaffold0304 (41-260)||(1605-1824)
[»] scaffold0034 (2 HSPs)
scaffold0034 (136-239)||(3168-3271)
scaffold0034 (106-254)||(69343-69491)
[»] scaffold1423 (1 HSPs)
scaffold1423 (115-273)||(1576-1734)
[»] scaffold0523 (1 HSPs)
scaffold0523 (41-239)||(1857-2055)
[»] scaffold0331 (1 HSPs)
scaffold0331 (1-259)||(16058-16315)
[»] scaffold0222 (1 HSPs)
scaffold0222 (136-254)||(9034-9152)
[»] scaffold0270 (2 HSPs)
scaffold0270 (43-200)||(5898-6055)
scaffold0270 (43-200)||(13028-13185)
[»] scaffold0100 (1 HSPs)
scaffold0100 (41-254)||(22305-22518)
[»] scaffold0026 (2 HSPs)
scaffold0026 (41-230)||(50807-50996)
scaffold0026 (121-273)||(30899-31051)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-49)||(2117-2165)
[»] scaffold0239 (1 HSPs)
scaffold0239 (121-273)||(10986-11138)
[»] scaffold0017 (1 HSPs)
scaffold0017 (93-273)||(195659-195839)
[»] scaffold0908 (1 HSPs)
scaffold0908 (58-271)||(916-1126)
[»] scaffold0476 (1 HSPs)
scaffold0476 (41-260)||(1665-1884)
[»] scaffold0312 (1 HSPs)
scaffold0312 (106-273)||(13-180)
[»] scaffold0298 (1 HSPs)
scaffold0298 (106-273)||(10242-10409)
[»] scaffold0104 (2 HSPs)
scaffold0104 (41-260)||(24181-24400)
scaffold0104 (41-260)||(44537-44756)
[»] scaffold0072 (1 HSPs)
scaffold0072 (103-254)||(53018-53169)
[»] scaffold0319 (1 HSPs)
scaffold0319 (43-273)||(720-950)
[»] scaffold0130 (2 HSPs)
scaffold0130 (41-239)||(8928-9126)
scaffold0130 (124-273)||(44846-44995)
[»] scaffold0012 (1 HSPs)
scaffold0012 (43-273)||(217542-217772)
[»] scaffold0324 (1 HSPs)
scaffold0324 (120-273)||(13410-13563)
[»] scaffold0148 (1 HSPs)
scaffold0148 (16-273)||(951-1208)
[»] scaffold0109 (1 HSPs)
scaffold0109 (112-273)||(40107-40268)
[»] scaffold0049 (1 HSPs)
scaffold0049 (41-230)||(49995-50184)
[»] scaffold0540 (1 HSPs)
scaffold0540 (58-266)||(6468-6676)
[»] scaffold0403 (1 HSPs)
scaffold0403 (58-274)||(8325-8541)
[»] scaffold0084 (1 HSPs)
scaffold0084 (121-273)||(7175-7327)
[»] scaffold0261 (2 HSPs)
scaffold0261 (41-260)||(21635-21854)
scaffold0261 (41-260)||(13456-13675)
[»] scaffold0256 (1 HSPs)
scaffold0256 (146-273)||(23299-23426)
[»] scaffold0203 (1 HSPs)
scaffold0203 (103-254)||(12481-12632)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-260)||(28492-28751)
[»] scaffold0067 (3 HSPs)
scaffold0067 (106-233)||(50365-50492)
scaffold0067 (106-233)||(59399-59526)
scaffold0067 (106-233)||(65787-65914)
[»] scaffold0751 (1 HSPs)
scaffold0751 (41-239)||(4164-4362)
[»] scaffold0358 (2 HSPs)
scaffold0358 (115-273)||(8003-8161)
scaffold0358 (115-273)||(17199-17357)
[»] scaffold0235 (2 HSPs)
scaffold0235 (166-239)||(9702-9775)
scaffold0235 (166-239)||(19916-19989)
[»] scaffold0180 (3 HSPs)
scaffold0180 (103-260)||(422-579)
scaffold0180 (103-260)||(4742-4899)
scaffold0180 (67-273)||(33899-34105)
[»] scaffold0089 (2 HSPs)
scaffold0089 (103-260)||(458-615)
scaffold0089 (41-233)||(14833-15025)
[»] scaffold0139 (1 HSPs)
scaffold0139 (136-260)||(37615-37739)
[»] scaffold0044 (2 HSPs)
scaffold0044 (124-272)||(16113-16261)
scaffold0044 (106-272)||(2375-2542)
[»] scaffold0035 (1 HSPs)
scaffold0035 (16-264)||(42202-42450)
[»] scaffold1373 (1 HSPs)
scaffold1373 (154-273)||(1067-1186)
[»] scaffold0865 (1 HSPs)
scaffold0865 (41-260)||(2392-2611)
[»] scaffold0348 (1 HSPs)
scaffold0348 (106-273)||(10074-10241)
[»] scaffold0333 (1 HSPs)
scaffold0333 (146-273)||(17608-17735)
[»] scaffold0133 (1 HSPs)
scaffold0133 (41-260)||(29405-29624)
[»] scaffold0086 (1 HSPs)
scaffold0086 (202-261)||(34682-34741)
[»] scaffold1288 (1 HSPs)
scaffold1288 (174-260)||(1107-1193)
[»] scaffold0771 (1 HSPs)
scaffold0771 (190-284)||(4423-4517)
[»] scaffold0156 (1 HSPs)
scaffold0156 (174-260)||(36080-36166)
[»] scaffold0031 (1 HSPs)
scaffold0031 (103-273)||(109584-109754)
[»] scaffold1477 (1 HSPs)
scaffold1477 (146-239)||(215-308)
[»] scaffold0215 (2 HSPs)
scaffold0215 (124-273)||(28774-28923)
scaffold0215 (95-200)||(28637-28742)
[»] scaffold0213 (1 HSPs)
scaffold0213 (172-273)||(4587-4688)
[»] scaffold0046 (1 HSPs)
scaffold0046 (103-260)||(80013-80170)
[»] scaffold0020 (1 HSPs)
scaffold0020 (41-254)||(99682-99895)
[»] scaffold1646 (1 HSPs)
scaffold1646 (41-273)||(1278-1510)
[»] scaffold0420 (1 HSPs)
scaffold0420 (103-238)||(634-769)
[»] scaffold0278 (1 HSPs)
scaffold0278 (122-273)||(405-555)
[»] scaffold0053 (1 HSPs)
scaffold0053 (136-254)||(56062-56180)
[»] scaffold0005 (1 HSPs)
scaffold0005 (170-260)||(262191-262281)
[»] scaffold0003 (1 HSPs)
scaffold0003 (170-260)||(195207-195297)
[»] scaffold0827 (1 HSPs)
scaffold0827 (1-74)||(5259-5332)
[»] scaffold0297 (1 HSPs)
scaffold0297 (124-273)||(7896-8045)
[»] scaffold0682 (1 HSPs)
scaffold0682 (174-254)||(1856-1936)
[»] scaffold0009 (1 HSPs)
scaffold0009 (103-263)||(250584-250744)


Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 16875615 - 16875905
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875615 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 16875714  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16875715 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 16875814  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16875815 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 16875905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 21848857 - 21849147
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21848857 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 21848956  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21848957 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 21849056  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21849057 ccagttgtgtgccaagttgtctaagtgggagttttggttgaaggaagtgagttttcttggtcatgtgatttctaagggtggtatttctgtg 21849147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 20650875 - 20651165
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||| |||||||||||||||    
T  20650875 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggacc 20650974  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||| |||||||||||||||||||||||||||||||| || |||||||| |||||||  |||||||||||||||||||||||||||||||| |||||    
T  20650975 gttttgtagtggtgttcatagatgatattttggtgtattcgaaatctgaggaggagcatgccgagcatttgaggattgtgttgcaagtcttgaaggagaa 20651074  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20651075 ccagttatgtgctaagttgtctaagtgtgagatttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 20651165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 22436564 - 22436278
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  22436564 tatggacagtatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggacc 22436465  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||| ||||||| |||||| || |||||    
T  22436464 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggagaagcatgctgagcatttgaggatagtgttgcgagtcttaaaggagaa 22436365  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 287  Q
     ||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  22436364 tcagttatgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 22436278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 21195060 - 21195344
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||  ||| |||||||| |||||||||||||||||||||||||||||||    
T  21195060 tatggacactatgagtattttgtgatgcaatttggagtatataatgtgccaggta-cttcatggaatatatgaatagaatatttcatccttatctggacc 21195158  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||| || ||||||| ||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  21195159 gttttgtggtggtatttatagatgctattttggtgtattcgaaatctgaggaggagcatgctgagcatttgaggattgtgttgcaagtattgaaggagaa 21195258  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 286  Q
    |||||| ||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  21195259 ccagttatgtgctaagttgtctaagagtgagttttggttgcaggaagtaagtttccttggtcatgtgatttctcagggtggtattt 21195344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 289
Target Start/End: Original strand, 23155571 - 23155848
Alignment:
Q  12 tgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 111  Q
    |||||||||||||||||||||||||| | | ||||||| ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  23155571 tgagtattctgtgatgccatttggagcacccaatgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtg 23155670  T
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| || ||||||||||| |||||||| ||||||||||| || |||| |||||||||||||||||||||| |||||||||| || || ||||| ||||    
T  23155671 gtgtttattgatgatattttagtgtattcgaagtctgaggaggatcatgttgagcatttgaggattgtgttgtaagtcttgaaggataatcagttatgtg 23155770  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  23155771 ctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttagtcatgtgatttctaaggatggtatttctg 23155848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 2 - 285
Target Start/End: Complemental strand, 23902424 - 23902141
Alignment:
Q  2 atggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  23902424 atggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccg 23902325  T
Q  102 ttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaac 201  Q
    |||| |||| ||||| || |||||||||||||||||||| |||| |||||| ||||||| |||||||||||||||| ||||||  |||||||| || ||     
T  23902324 ttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagcatgctgagcatttgaggattatgttgcgtgtcttgaaggaaaat 23902225  T
Q  202 cagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
     |||||||||| |||| ||| ||||| ||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  23902224 tagttgtgtgctaagtggtcgaagtgcgagctttggttgcgagaagtgagtttccttggtcatgtgatttctaagggtggtatt 23902141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 20394695 - 20394925
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    ||||| || ||||| |||||||||||||||||| | || |||||| ||||| | || || ||||| || |||||||| || ||||||||| | || || |    
T  20394695 aatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttagatcgctttgttgttgtgttcattgacgatattttgatatactcta 20394794  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    ||||||| ||||| ||||  |||||||||| |||||| ||||||||  ||||||||||  |||| | |||||||||||| |||||||| || ||||||||    
T  20394795 agtctgaagaagaacatgccgagcatttgaagattgttttgcaagtgctgaaagagaaaaagttatatgccaagttgtcaaagtgtgaattctggttgaa 20394894  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
      | |||||||| ||||| ||| | ||||||    
T  20394895 taaggtgagttttcttggccatattatttct 20394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 273
Target Start/End: Complemental strand, 22988945 - 22988719
Alignment:
Q  47 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtc 146  Q
    ||||| |||| ||||||||||||||||||   || |||||| | | | |||| ||||| ||||| |||||||| |||||||||||| | ||||| ||| |    
T  22988945 cgccacgtgtgtttatggaatacatgaatcacatttttcatgcatttttggatcgtttcgtggttgtgttcatcgatgatattttgatatattccaagac 22988846  T
Q  147 tgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaa 246  Q
    ||| ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  || | | ||| || ||||| |||||||| || |||||||| ||     
T  22988845 tgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagag 22988746  T
Q  247 gtgagtttccttggtcatgtgatttct 273  Q
    |||||||| ||||| ||||| ||||||    
T  22988745 gtgagttttcttggccatgttatttct 22988719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 22422454 - 22422684
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || |    
T  22422454 aatgcgccaggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactcca 22422553  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    |||| || ||||| |||| ||| ||||||| |||||| |||||||| |||||||||||  |  | | ||| || || || |||||||| || ||||||||    
T  22422554 agtccgaagaagaacatgttgaacatttgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattatggttgaa 22422653  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || |||||||||||||| ||||| ||||||    
T  22422654 agaggtgagtttccttggccatgttatttct 22422684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 23887289 - 23887015
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || |||||||| |||||||| || || ||  |||||||||||| ||| |||||||| |||||||||   || |||||| ||||| | || |    
T  23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc 23887190  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaaga----gcatggtgagcatttgaggattgtgttgcaagtcttgaaag 196  Q
    | || ||||| |||||||| |||||||||||| | || || |||||| | |||||    | ||| ||||||||||| |||||| ||||||||  |||| |    
T  23887189 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtctaaagaagaacatgtatgttgagcatttgaagattgttttgcaagtgctgaagg 23887090  T
Q  197 agaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
    ||||  |||| | |||||||||||| |||||||| || | |||||| || |||||||| ||||| ||||| ||||    
T  23887089 agaagaagttatatgccaagttgtcaaagtgtgaattctagttgaatgaggtgagttttcttggccatgttattt 23887015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 31569402 - 31569634
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  31569402 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 31569501  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| |     
T  31569502 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 31569601  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  31569602 agtgaagtgagtttccttggtcatattatttct 31569634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 274
Target Start/End: Original strand, 24631192 - 24631459
Alignment:
Q  7 cactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttg 106  Q
    ||||||||||||||||| ||| ||||||| ||  |||||| || |||  | |||||||||||||||||||  ||||| |||  ||||  ||| |  | ||    
T  24631192 cactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaatatgatattccattattattgggatcagtgtg 24631291  T
Q  107 tggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagtt 206  Q
    |||| ||||||||||| ||||| ||||||| ||| ||||| ||||| |||||||  |||||| ||| ||| |||| |||   |||||| |||||  | ||    
T  24631292 tggttgtgttcatagacgatatcttggtgtcttcgaagtcggaggaggagcatgcagagcatctgatgatcgtgtcgcagaccttgaaggagaagaaatt 24631391  T
Q  207 gtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 274  Q
    || ||||| ||||| |||||||||||||||||||    ||||||| ||||||  ||||||||| ||||    
T  24631392 gtatgccatgttgtttaagtgtgagttttggttgtgataagtgagcttccttaatcatgtgatatcta 24631459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 22131672 - 22131833
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||||||| |||||| |||||||| |||||||||||  |  | | ||    
T  22131672 gtgtttatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatttgaagattgtcttgcaagtgttgaaagagaagaaactttatg 22131771  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||||| || |||||||||||||| ||||| ||||| ||||| ||||||    
T  22131772 ctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 22131833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 20016885 - 20017055
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  20016885 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 20016984  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | |||||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  20016985 aactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 20017055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 23652260 - 23652030
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    ||||| || ||||| |||||||| ||||||||| | || |||||| | | | |||| || || ||||| || ||||| ||||||| |||| | || || |    
T  23652260 aatgcacctggtgtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgttttcattgatgatactttgatttactcca 23652161  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    || |||| || || |||| ||||||||||| |||||| || ||||| |||||||||||  || | | ||| || |||||||||||||| |||||||||||    
T  23652160 agactgaagaggaacatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaattgtctaagtgtgaattttggttgaa 23652061  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || || ||||| ||||| ||||| ||||||    
T  23652060 agaggtaagttttcttggccatgtcatttct 23652030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 22376015 - 22376172
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    ||||| |||||||| |||||||| ||||||||| | || |||||| | | | |||| ||||||||||| |||||||| || ||||||||  | || || |    
T  22376015 aatgcaccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgttttgtggttgtgttcatcgacgatatttttatatactcca 22376114  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    || |||| ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||    
T  22376115 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 22376172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 20008481 - 20008713
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| |  ||||||||  |  | |||||    
T  20008481 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttagtgatgatatcctaatttattc 20008580  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| ||||||||||  |||||| ||| ||||||||||||| | |||||||| ||  |||||| |||||||||||| || ||||| ||||||||     
T  20008581 taagaatgaagaagagcatgcagagcatatgaagattgtgttgcaactgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggtta 20008680  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  20008681 agtgaagtaagttttcttggccatattatttct 20008713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 21323839 - 21324057
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| ||| || | |||||    
T  21323839 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttatcgatgacattctgatctattc 21323938  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    |||| |||| ||||||||||  || ||| ||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||||||||| |||||     
T  21323939 aaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaattttgaaagagaa-aagttgtatgctaagttgtcgaagtgtgagttctggtta 21324037  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||||||||| |||||    
T  21324038 agtgaagtgagttttcttgg 21324057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 22317241 - 22317158
Alignment:
Q  202 cagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
    ||||| ||||| |||||||| ||||||||||||||||||  | ||||  ||||||||||| |||||||||||||||||||||||    
T  22317241 cagttatgtgctaagttgtcgaagtgtgagttttggttgcggaaagttggtttccttggtaatgtgatttctaagggtggtatt 22317158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 18858736 - 18858566
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || || |||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  18858736 tttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 18858637  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  18858636 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 18858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 17672645 - 17672814
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  17672645 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 17672744  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  17672745 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 17672814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 23657053 - 23656929
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||||||  |||||| |||||||||||| ||||||||||| |    
T  23657053 tattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaagttgtcaaagtgtgagttat 23656954  T
Q  236 ggttgaaggaagtgagtttccttgg 260  Q
    |||| |  ||||| ||||| |||||    
T  23656953 ggttaagtgaagtaagttttcttgg 23656929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 21927649 - 21927450
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  21927649 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 21927550  T
Q  141 aaagtctgaggaagagcatggt-gagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     ||| |||| ||||||||| |  |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||    
T  21927549 taagactgaagaagagcattgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattctggtt 21927450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16414352 - 16414302
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgcca 51  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  16414352 tatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 273
Target Start/End: Complemental strand, 19114801 - 19114679
Alignment:
Q  151 gaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtga 250  Q
    ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| |||||||    
T  19114801 gaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtga 19114702  T
Q  251 gtttccttggtcatgtgatttct 273  Q
    |||| || || ||||| ||||||    
T  19114701 gttttctaggccatgttatttct 19114679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 272
Target Start/End: Original strand, 19482689 - 19482855
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||  || ||| ||| |||||| || ||||| |||||||||||  |      
T  19482689 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaac 19482788  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||| ||||||||||| |||||    
T  19482789 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 19482855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 19861656 - 19861424
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||| | || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  19861656 ctaatgcgcctggtgtgtttatgaagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 19861557  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| ||||| ||||  |||||| ||| ||||| ||||||||| |||||| | ||  |||||| |||||||||||| || ||||| ||||||||     
T  19861556 taagaatgaagaagaacatgcagagcatctgaagattgagttgcaagtgttgaaataaaagaagttgtatgccaagttgtccaaatgtgaattttggtta 19861457  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  19861456 agtgaagtaagttttcttggccatattatttct 19861424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 20390292 - 20390140
Alignment:
Q  69 catgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcat 168  Q
    |||||||||||| || ||| |||   |||| || |||||||| ||||| || ||||| || ||| | ||||| ||| |||| ||||||||||  ||||||    
T  20390292 catgaatagaattttccatgctttcttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcat 20390193  T
Q  169 ttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 221  Q
    || | ||||||||||||||| ||||| || ||  |||||| ||||||||||||    
T  20390192 ttaaagattgtgttgcaagtgttgaaggaaaaaaagttgtatgccaagttgtc 20390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 21253085 - 21252933
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | ||  ||||||| |||||||||||  || | | ||| || ||||    
T  21253085 gatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttctgcaagtattgaaagagaagaagctttatgcgaaattgt 21252986  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21252985 ctaagtgagaattctggttgaaagaagtgagctttcttggacatgttatttct 21252933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 21392501 - 21392653
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  21392501 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcaaaattgt 21392600  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21392601 ctaagtgcgaattctggttgaaagaagtgagctttcttggacatgttatttct 21392653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 21783060 - 21783212
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  21783060 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgt 21783159  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21783160 ctaagtgcgaattctggttgaaagaagtgagctttcttggacatgttatttct 21783212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 21786995 - 21787147
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||| ||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  21786995 gatgatatattgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcaaaattgt 21787094  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || || |||||||| |||||||| || ||||| ||||| ||||||    
T  21787095 ctaagtgcgaattctggttgaaagaagtgagctttcttggacatgttatttct 21787147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 15535499 - 15535372
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  15535499 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 15535400  T
Q  246 agtgagtttccttggtcatgtgatttct 273  Q
    ||| ||||| ||||| ||||| ||||||    
T  15535399 agtaagttttcttggccatgttatttct 15535372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 30311809 - 30311936
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  30311809 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 30311908  T
Q  246 agtgagtttccttggtcatgtgatttct 273  Q
    ||| ||||| ||||| ||||| ||||||    
T  30311909 agtaagttttcttggccatgttatttct 30311936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 22118797 - 22118967
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| | || ||||||| ||| |||||| |||||||| |||||||||||      
T  22118797 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22118896  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||| ||| || |||||||| || || ||||| ||||||    
T  22118897 agctttatgctaaattgtctaagtgtgaattctggtcgaaagaggtgagttttctaggccatgttatttct 22118967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 22127581 - 22127751
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| | || ||||||| ||| |||||| |||||||| |||||||||||      
T  22127581 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22127680  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||| ||| || |||||||| || || ||||| ||||||    
T  22127681 agctttatgctaaattgtctaagtgtgaattctggtcgaaagaggtgagttttctaggccatgttatttct 22127751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 22246995 - 22247225
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||| ||||||||| | || |||| | | | | |||| |||||  |||| |||||||| || ||||||||| | || || |    
T  22246995 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcctgcgtttttggatcgtttcatggttgtgttcatcgacgatattttgatatactcca 22247094  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    ||  ||| | ||| |||| ||||||||||  |||||| ||||||||  ||||||||||  |||| | ||| || || || |||||||| || ||||||||    
T  22247095 agattgaaggagaacatgttgagcatttgtagattgttttgcaagtgctgaaagagaagaagttatatgctaaattttcaaagtgtgaattctggttgaa 22247194  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || | |||||| | ||| ||||| ||||||    
T  22247195 agaggcgagttttcatggccatgttatttct 22247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 19869954 - 19869818
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| || ||||| ||||| || ||||| ||| | || |    
T  19869954 tatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaacagaattttccatccgtatttagatc 19869855  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgta 137  Q
      || || || || ||||| |||||||||||||||||    
T  19869854 agttcgttgtagtattcattgatgatattttggtgta 19869818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 21920388 - 21920540
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || |  ||| |||| |||||  ||| ||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||    
T  21920388 gatgatattttgatttacttcaagactgaagaagaatatgctgagcatttgaagttagttttgcaagtgttgaaagagaagaaactttatgcgaaattgt 21920487  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||| |||||||| |||||||| || ||||| ||||| ||||||    
T  21920488 ctaagtgtgagttctggttgaaagaagtgagctttcttggacatgttatttct 21920540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 19980186 - 19979956
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||| || || |||||||| ||||||||| | || |||||| | | | |||| || || ||||| || || || || ||||||||| | || || |    
T  19980186 aatgcgcctggagtgtttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgacgatattttgatttactcca 19980087  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    || |||| ||||| |||| |||| || ||| |||||| |||||||| |||||||||||  | || | ||| || || ||||||| ||| || ||||||||    
T  19980086 agactgaagaagaacatgctgagaatctgaagattgtcttgcaagtgttgaaagagaagaaattttatgctaaattatctaagtatgatttctggttgaa 19979987  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || || ||||| ||||| ||||| ||||||    
T  19979986 agaggtaagttttcttggccatgttatttct 19979956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 32602295 - 32602133
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  32602295 gtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 32602196  T
Q  212 ccaagttgtctaagtgtgagtt-ttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || ||||| |||||||| || ||||||||| ||||| |||||  |||| ||||| ||||||    
T  32602195 ctaaattgtcaaagtgtgaattcttggttgaaagaagtaagtttttttggccatgttatttct 32602133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 28983132 - 28982979
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||||||||| || || ||||||||| |  | |||||    
T  28983132 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28983033  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
     |||  |||||| |||||||  |||||| |||| || ||||||||||| |||||    
T  28983032 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 28982979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 28988351 - 28988198
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||||||||| || || ||||||||| |  | |||||    
T  28988351 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattc 28988252  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
     |||  |||||| |||||||  |||||| |||| || ||||||||||| |||||    
T  28988251 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 28988198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 29302114 - 29302218
Alignment:
Q  169 ttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtga 268  Q
    |||| ||||||||| ||||| ||||||||||   |||||| |||||||||||| || ||||| || |||||||  ||||| ||||| ||||| || || |    
T  29302114 ttgaagattgtgttacaagtgttgaaagagaggaagttgtatgccaagttgtcaaaatgtgaattctggttgagtgaagtaagttttcttggccacgtta 29302213  T
Q  269 tttct 273  Q
    |||||    
T  29302214 tttct 29302218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 239
Target Start/End: Original strand, 16269795 - 16269982
Alignment:
Q  52 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 151  Q
    ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||| ||| | ||||| |||  ||| |    
T  16269795 ggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgttcattgatgatatcttgatttattccaagaatgaag 16269894  T
Q  152 aagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    | |||||||  |||||  |||| ||||| |||||||| ||||| || ||   ||||| ||| |||||||| || |||||||| |||||    
T  16269895 aggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcaaaatgtgagttctggtt 16269982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 19864727 - 19864886
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttg-caagtcttgaaagagaaccagttgtgtgcc 213  Q
    ||||| |||||||||||| | || || |||||||| ||||| |||  |||||||||||   | || ||  ||||| |||||||||||  || | | |||     
T  19864727 ttcattgatgatattttgatttactctaagtctgaagaagaacatattgagcatttgaaactggtttttacaagtgttgaaagagaagaagctttatgcg 19864826  T
Q  214 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || ||||||||||| || || |||||||| ||||||||||| ||||| ||||| ||||||    
T  19864827 aaattgtctaagtgcgaattctggttgaaagaagtgagttttcttggacatgttatttct 19864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 273
Target Start/End: Complemental strand, 22041983 - 22041816
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || || ||||||||| |||| || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||  |||||||||||  |      
T  22041983 gtggttgtgtttatcgacgatattttgatgtactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagcgttgaaagagaagaaac 22041884  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||| || || |||||||| || || |||||||| ||| | ||||| ||||| ||||| ||||||    
T  22041883 tttatgctaaattatctaagtgagaattctggttgaaagaaataagttttcttggccatgttatttct 22041816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 6605879 - 6605681
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| ||||| || || |||||||||||  | |||||    
T  6605879 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 6605780  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     |||  |||||| |||||||  |||||| |||| ||||| ||||| || ||||| || ||   ||||| ||| ||||| || || |||||||| |||||    
T  6605779 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaggtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtt 6605681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 4984282 - 4984065
Alignment:
Q  22 gtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatag 121  Q
    |||||||| || || ||| |||| ||||| ||||| |||||||| ||||||||| |||| || ||| ||| ||| ||    ||||| |||||||||||      
T  4984282 gtgatgcctttcggtgtaactaaagcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctagataagtttgttgtggtgttcatta 4984183  T
Q  122 atgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 221  Q
    ||||||  ||| | ||||| |||   |||||||||||||  |||||| |||| || || |||||||| || || ||||| |  |||| ||  ||||||||    
T  4984182 atgataccttgatttattccaagaacgaggaagagcatgcagagcatctgagaatagtattgcaagtgttaaaggagaagcgattgtatgttaagttgtc 4984083  T
Q  222 taagtgtgagttttggtt 239  Q
     || |||||||| |||||    
T  4984082 aaaatgtgagttctggtt 4984065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 22052989 - 22052865
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| || |||||||  || ||| |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||  || ||||| || |    
T  22052989 tattctaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgttgaaatgtgaattct 22052890  T
Q  236 ggttgaaggaagtgagtttccttgg 260  Q
    |||| |  ||||||||||| |||||    
T  22052889 ggttaagtgaagtgagttttcttgg 22052865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 25620 - 25330
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25620 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 25521  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25520 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 25421  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25420 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 25330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 283; Significance: 1e-158; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 15134 - 14844
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15134 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 15035  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15034 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 14935  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14934 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 14844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 11254 - 11544
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11254 tatggacactatgagtattctttgatgccatttggagtgtctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 11353  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  11354 gttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcataatgagcatttgaggattgtgttgcaagtcttgaaagagaa 11453  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11454 ccagttatgtgcaaagttatataagtgtgagttttggttgaaggaagtgagtttccttggtcaagtgatttctaagggtggtatttctgtg 11544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 7826084 - 7825794
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7826084 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 7825985  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7825984 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 7825885  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7825884 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 7825794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 27105860 - 27106150
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27105860 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 27105959  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27105960 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 27106059  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27106060 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 27106150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 27172465 - 27172175
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172465 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 27172366  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27172365 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 27172266  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27172265 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 27172175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 4442112 - 4441826
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||||| |||||| ||||||| ||||||||    
T  4442112 tatgaacactaagagtattctgtgatgccattcggagtatccaatgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggacc 4442013  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||  |||||||||||||| ||||||| ||||||||| || ||    
T  4442012 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctggggaggagcatgtcgagcatttgaggatggtgttgcgagtcttgaaggaaaa 4441913  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 287  Q
     | ||| ||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  4441912 tcggttatgtgctaagttgtcgaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 4441826  T

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Target: chr7; HSP #5
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 17925834 - 17925550
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||    
T  17925834 tatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagacc 17925735  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||  ||| ||||||| || |||||| || ||||||||||  |||||||| |||||    
T  17925734 gttttgtggtggtgtttatagattatattttggtatattcaaagtctagggaggagcatgttgtgcatttaagaattgtgttgcgcgtcttgaaggagaa 17925635  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
     ||||| ||||| ||||||||||||||||| |||||||||   ||||||||||||||||||||||||||||| ||||||||||||    
T  17925634 tcagttatgtgctaagttgtctaagtgtgaattttggttgcgtgaagtgagtttccttggtcatgtgatttcgaagggtggtatt 17925550  T

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Target: chr7; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 13458219 - 13457935
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||| ||| ||||||| || ||| |    
T  13458219 tatggacactatgagtattttgtgatgtcatttggagtatccaatgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatc 13458120  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| || |||||||||||||||||||| | ||| ||||| ||| ||| |||||||||||||||||||||||  ||||||||||||||    
T  13458119 gttttgtggtggtgtttatcgatgatattttggtgtattcgaggtcagaggaggagtatgctgagcatttgaggattgtgttgcgtgtcttgaaagagaa 13458020  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
     || || ||||| |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||| |||||||    
T  13458019 tcatttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttgatcatgtgatttcgaaggatggtatt 13457935  T

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Target: chr7; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 15716989 - 15717273
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| |||||||| |||||||| |||||||||||  || |||||| |||  ||||||| |||||||| |||||||||||||| ||||||| ||||||||    
T  15716989 tatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttcatggaatatatgaatagaatattccatccttttctggacc 15717088  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      ||| |||| ||||| ||||| ||||| ||||| ||||||| ||| ||||| ||||||| ||| ||||| ||||  ||||||||   |||||| |||||    
T  15717089 agtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagcatgctgaacattttaggaccgtgttgcagaccttgaaggagaa 15717188  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
      |||||| ||| || ||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||| ||||||    
T  15717189 gaagttgtttgctaatttgtcgaagtgtgagttttgattgcaggaagtgagttttcttggtcatgtgatttcaaagggcggtatt 15717273  T

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Target: chr7; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 17143362 - 17143628
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||| ||||||| |||| ||||||| ||  ||||| |||| |||||||| |||||||| ||||||||||| || ||||||||| |||| |    
T  17143362 tatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatccttatttggatc 17143461  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      |||||||||||||| ||||| ||||| ||||||||||| ||||| ||||| || ||||  |||||| |||||||||||||||     ||||| |||||    
T  17143462 agtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatcatgcggagcatatgaggattgtgttgcgtacgttgaaggagaa 17143561  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 267  Q
      |||||| ||  |||||||| ||||||||||||||||||   |||| |||||||||||||||||||    
T  17143562 gaagttgtttgataagttgtcgaagtgtgagttttggttgcgtgaagggagtttccttggtcatgtg 17143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 48813338 - 48813609
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  ||||||||||| |||| |||||||| ||||||||| | || |||||| ||||| | || |    
T  48813338 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatc 48813437  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | || ||||| |||||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| |||||||||||||||  |||| |||||    
T  48813438 gcttcgtggttgtgttcattgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaaggagaa 48813537  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      |||| | |||||| ||||| |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  48813538 gaagttatatgccaa-ttgtcaaagtgtgaattctggttgaatgaggtgagttttcttggccatgttatttct 48813609  T

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Target: chr7; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 13379058 - 13378969
Alignment:
Q  12 tgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  13379058 tgagtattctgtgatgccatttggagtatccaatgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 14938341 - 14938245
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 286  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  14938341 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 14938245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 15365934 - 15365838
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 286  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  15365934 ttgaaagacaatcagttgtgtgctaagttgtctaagtgtgagttttggttgtgggaagtgagtttccttggtcatgtgatttctaaaggtggtattt 15365838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 19614820 - 19614588
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  19614820 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 19614721  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||||||||||||||  || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  19614720 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 19614621  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  19614620 agtgaagtgagttttcttggccatattatttct 19614588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 11551299 - 11551460
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | ||||| ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  11551299 gtgttcatcgatgatattttgatttattccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 11551398  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  11551399 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 11551460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 104 - 273
Target Start/End: Original strand, 11770430 - 11770599
Alignment:
Q  104 ttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacca 203  Q
    ||||||| |||||||| |||||||||||| | || || |||||||||| ||| |||| ||||||||||| |||||| |||||||| |||||||||||  |    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaa 11770529  T
Q  204 gttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| | ||  || |||||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  11770530 gttatatgttaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 11770599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 14139824 - 14139592
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || |||||||||||| | |||||    
T  14139824 ctaacgcgcctggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattc 14139725  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||||||||||| |||||||| ||  |||||| |||||| ||||| || |||||||||||| |     
T  14139724 taagactgaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggcta 14139625  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||||||||||||| | ||||||    
T  14139624 agtgaagtaagtttccttggtcatattatttct 14139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 115 - 273
Target Start/End: Complemental strand, 12689572 - 12689414
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  12689572 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 12689473  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  12689472 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 12689414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 11386533 - 11386746
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||||||||| |||||||| || | ||| ||||| |||||| ||| ||||||  | || ||||||||||| || |||||||||||  | |||||    
T  11386533 ctaatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 11386632  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  |||||| |||||||||| || || ||  ||||||||||  |||||| ||| |||||||| || ||||| || |||||     
T  11386633 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggtta 11386732  T
Q  241 aaggaagtgagttt 254  Q
    |  |||||||||||    
T  11386733 agtgaagtgagttt 11386746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 15626669 - 15626437
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    ||||||| |||||||| |||||||| ||||||||  | || |||||| ||||| | || || || ||||| | |||||| |||||||||||  | || |     
T  15626669 ctaatgcaccaggtgtatttatggagtacatgaaccgtatttttcatgcttatttagatcgcttcgtggttgcgttcatcgatgatattttaatatacta 15626570  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||||||| ||||| ||||  ||| |||||| |||||| ||||||||  ||||||||||  |||| | ||| |||||||| |||||||| || ||||||    
T  15626569 taagtctgaagaagaacatgtcgagtatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttg 15626470  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    || || |||||||||||||| ||| | ||||||    
T  15626469 aatgaggtgagtttccttggccatattatttct 15626437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 19149356 - 19149124
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||| |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  19149356 ctaatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 19149257  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  |||||| ||| ||||||||||||||| |||||||| ||  ||||||||| ||||||||| || ||||| || |||||     
T  19149256 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggtta 19149157  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  19149156 agtgaagtaagttttcttggccatattatttct 19149124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 20748755 - 20748523
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  20748755 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 20748656  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  |||||| ||| ||||||||||||||| |||||||| ||  ||||||||| ||||||||| || ||||| || |||||     
T  20748655 taagactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggtta 20748556  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  20748555 agtgaagtaagttttcttggccatattatttct 20748523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 12204904 - 12205123
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||||||||    | |||||| ||||| || |||||||| ||  | ||||     
T  12204904 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatctgtggtcgtgtttattgatgatatcttaatttattt 12205003  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  |||||| |||  |||||||||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||     
T  12205004 taagactgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtta 12205103  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  12205104 agtgaagtaagttttcttgg 12205123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 274
Target Start/End: Original strand, 14262349 - 14262581
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  14262349 ctaatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 14262448  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     | | |||| ||||||||||  |||||| ||| |||| |||||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||     
T  14262449 ta-gactgaagaagagcatgcagagcatctgaagattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattttggtta 14262547  T
Q  241 aaggaagtgagtttccttggtcatgtgatttcta 274  Q
    |  ||||| ||||| ||||| ||| | |||||||    
T  14262548 agtgaagtaagttttcttggccatattatttcta 14262581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 14956627 - 14956466
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | || || ||| |||| |||||  ||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  14956627 gtgttcatcgatgatattttgatttactccaagactgaagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 14956528  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  14956527 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 14956466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 274
Target Start/End: Original strand, 15122170 - 15122384
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||||||||||||||| || |||| || |||| ||||    |||||||| ||||||||| | ||||| ||||||||||||||||  ||||| ||||    
T  15122170 tttatggaatacatgaataggatttttcgtctttatttggattagtttgtggtcgtgttcatataagatatcttggtgtattcaaagttggaggaggagc 15122269  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
     ||  |||||| |||| |||||||||| || |||  | |||||  |||||| ||  ||| |||| ||||||||||| | |||| | ||||||||||||||    
T  15122270 ttgcggagcatatgagaattgtgttgc-agactt-taggagaataagttgtatgttaaggtgtcgaagtgtgagttctagttgcaagaagtgagtttcct 15122367  T
Q  258 tggtcatgtgatttcta 274  Q
    ||||||| |||| ||||    
T  15122368 tggtcatatgatatcta 15122384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 23503974 - 23504206
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  23503974 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 23504073  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || |||||||||||| |     
T  23504074 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggcta 23504173  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  23504174 agtgaagtgagtttccttggtcatattatttct 23504206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 11235401 - 11235571
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  11235401 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 11235500  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  11235501 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 11235571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 13023502 - 13023280
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||| | || |||||  |||| || ||| ||| ||||||    |||||||||||||| || ||||||| |||| | |||||    
T  13023502 ctaatgcgcctggtgtttttatgtattatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttattgatgataatttgatttattc 13023403  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| || |||||||  || ||| |||| ||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||     
T  13023402 taagactgaagaggagcatgcagaacatctgagaattgtattgcaagttttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttgtggtta 13023303  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    |  ||||||||||| || |||||    
T  13023302 agtgaagtgagttttctgggtca 13023280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 14334478 - 14334308
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  14334478 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 14334379  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | |||||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  14334378 aactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 14334308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 15159245 - 15159415
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  15159245 tttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 15159344  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  15159345 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 15159415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 253
Target Start/End: Complemental strand, 13675597 - 13675385
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| |||| |||||    |||||||| || || || ||||| ||| || | |||||    
T  13675597 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgtatttattgatgacattctgatttattc 13675498  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    |||| |||| ||||||||||  |||||| ||| |||||| |||||||| ||||| |||||  |||||| ||| |||||||| ||||||||||| |||||     
T  13675497 aaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaatgagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtta 13675398  T
Q  241 aaggaagtgagtt 253  Q
    |  ||||||||||    
T  13675397 agtgaagtgagtt 13675385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 18052057 - 18052289
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  18052057 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 18052156  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || |||||||||||| |     
T  18052157 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggcta 18052256  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  18052257 agtgaagtgagtttccttggtcatattatttct 18052289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 273
Target Start/End: Complemental strand, 8709683 - 8709517
Alignment:
Q  107 tggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagtt 206  Q
    |||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  || |    
T  8709683 tggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagct 8709584  T
Q  207 gtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
     | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8709583 ttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8709517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 15147085 - 15147243
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||| ||||||||||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  15147085 ttcattgatgatatttttatctactccaagactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaaactttatgcaa 15147184  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | ||||||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  15147185 aattgtctaagtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 15147243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 44789539 - 44789708
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||||||  |||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||      
T  44789539 tttgtggttatgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 44789638  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    || | | ||| || |||||||||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  44789639 agctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 44789708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 271
Target Start/End: Original strand, 15559 - 15706
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||    
T  15559 gatattttgatttactccaagactgaagaagaacatgctgagcatctgatgattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtcta 15658  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
    ||||||| || |||||||||||||| ||||| ||||| ||||| ||||    
T  15659 agtgtgaattctggttgaaggaagtaagttttcttggccatgttattt 15706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 16948698 - 16948789
Alignment:
Q  163 gagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    |||||| ||| |||||||||||||||||||||||| ||  |||||| ||| ||| |||| ||||||||||||||||| |  |||||||||||    
T  16948698 gagcatctgaagattgtgttgcaagtcttgaaagaaaagaagttgtatgctaagctgtcaaagtgtgagttttggttaagtgaagtgagttt 16948789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 16070461 - 16070631
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||||||| |  | ||||| ||| |||| ||||||||||  ||| || ||| |||||| |||||||| |||||||| ||      
T  16070461 tttgtggttgtgtttattgatgatattctcatttattctaagactgaagaagagcatgcagagtatctgaagattgtattgcaagtgttgaaagaaaaga 16070560  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||| |||||||||||| || |||||||| ||||| |  ||||| ||||| || |||||| | ||||||    
T  16070561 agttgtatgccaagttgtccaaatgtgagttctggttaagtgaagtaagttttctgggtcatattatttct 16070631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 26092902 - 26093124
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  26092902 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 26093001  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  26093002 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 26093101  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  26093102 aatgaagtaagttttctgggtca 26093124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 14041765 - 14041680
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||| |||||||||||| | || || ||| |||||||||| |||| ||||||||||| |||||| |||||||| |||||||||||    
T  14041765 ttcattgatgatattttgatttactccaagactgaggaagaacatgatgagcatttgaagattgttttgcaagtgttgaaagagaa 14041680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 14351795 - 14351710
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||| |||||||||||| | || || ||| |||||||||| |||| ||||||||||| |||||| |||||||| |||||||||||    
T  14351795 ttcattgatgatattttgatttactccaagactgaggaagaacatgatgagcatttgaagattgttttgcaagtgttgaaagagaa 14351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 273
Target Start/End: Complemental strand, 10872782 - 10872602
Alignment:
Q  93 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttg 192  Q
    |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||    
T  10872782 tctggatcggtttgtggtcgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttg 10872683  T
Q  193 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||  |  | | | | || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  10872682 aaagagaagaaactttatcctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 10872602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 15100707 - 15100926
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| || ||| | |||||    
T  15100707 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattc 15100806  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| ||| ||| || |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||     
T  15100807 taagactgaagaagagcatgcagaacatctgaagatcgtcttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctggtta 15100906  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  15100907 agtgaagtaagttttcttgg 15100926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 11301317 - 11301539
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  11301317 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 11301416  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| || ||||||||||| ||||| || ||   ||||| ||| |||||||| || |||||| | |||||     
T  11301417 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttgtcaaaatgtgagatctggtta 11301516  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  11301517 aatgaagtaagttttctgggtca 11301539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 239
Target Start/End: Original strand, 13966772 - 13966970
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  13966772 ctaacgcgcctggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 13966871  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     |||  ||| || |||||||  |||||| |||| ||||| |||||||| |||||||||||   ||||| ||| |||||||| || |||||||| |||||    
T  13966872 caagaatgaagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaagaggttgtatgctaagttgtcaaaatgtgagttctggtt 13966970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 239
Target Start/End: Original strand, 26116694 - 26116892
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| |||||||| ||||||||| |||| || ||| ||| ||||||    ||| | |||||||| || || ||||||||  | |||||    
T  26116694 ctaacgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttcttgtggtgtttattgacgatattttaatctattc 26116793  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     |||  |||||| |||||||  |||||| |||| |||||||||||||| ||||| || ||   ||||| ||| |||||||| || |||||||| |||||    
T  26116794 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctggtt 26116892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 49154446 - 49154224
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||  ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  49154446 ctaatgcgcctggtgtttttatggggtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 49154347  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  49154346 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 49154247  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  49154246 aatgaagtaagttttctgggtca 49154224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 39232 - 39368
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| || ||||| ||||| || ||||| ||| | || |    
T  39232 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtttttatggagtatatgaacagaattttccatccatatttagatc 39331  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgta 137  Q
      || || || || ||||| |||||||||||||||||    
T  39332 agttcgttgtagtattcattgatgatattttggtgta 39368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 13688123 - 13688026
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||    
T  13688123 tttgtggttgtgtttatcgacgatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaa 13688026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 14284542 - 14284699
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| || ||||| ||||| |||||| | ||||| ||| |||| || ||||||   || ||| |||||||| | |||||||| |||||||||||      
T  14284542 tttgtggttgtattcattgatgacattttgatttattctaagactgaagaggagcatacagaacatctgaggattatattgcaagtattgaaagagaaga 14284641  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    || ||| ||| |||||||| || |||||||| | ||| |  ||||||||||| |||||    
T  14284642 agctgtatgctaagttgtcgaaatgtgagttctagttaagtgaagtgagttttcttgg 14284699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 12458714 - 12458587
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| || |||||||||||  | ||||| |||  ||| || |||||||  |||||| |||| ||||| |||||||| |||||||| ||  |||||| ||    
T  12458714 gtgtttattgatgatattttaatctattccaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaagttgtatg 12458615  T
Q  212 ccaagttgtctaagtgtgagttttggtt 239  Q
    | |||||||| || |||||||| |||||    
T  12458614 caaagttgtcaaaatgtgagttctggtt 12458587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 15342447 - 15342357
Alignment:
Q  170 tgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || ||||| |  ||||||||||| |||||    
T  15342447 tgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttcttgg 15342357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 8200596 - 8200540
Alignment:
Q  217 ttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8200596 ttgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8200540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 283; Significance: 1e-158; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 16380595 - 16380885
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380595 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 16380694  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16380695 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 16380794  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16380795 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 16380885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 16648191 - 16648481
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648191 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 16648290  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16648291 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 16648390  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16648391 ccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 16648481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 1647036 - 1647326
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1647036 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggacc 1647135  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  1647136 gttttgtggtggtgttcatagatgacattttggtgtattcgaagtttgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagataa 1647235  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647236 ccggttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 1647326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 23998307 - 23998018
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998307 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 23998208  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  23998207 gttttgtggtggtgttcatagatgatattttggtgtattgaaagtccgaggaagagcatgctgaacatttgaggattgtgttgtaagtcttgaaagagaa 23998108  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 290  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23998107 ccagttatgtgccaagttgtctaagtgtgagttttggttggaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 23998018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 16100074 - 16099778
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttat------ggaatacatgaatagaatatttcatccttatc 94  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||      ||| || |||||||||||||||||||| |||     
T  16100074 tatggacactatgagtattatgtaatgccatttggagtgtctaatgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatt 16099975  T
Q  95 tggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||| ||||| | ||||||||| |||||||||||||||||||||||    
T  16099974 tggaccgttttgtggtggtgtttatagatgataatttggtgtattcgaagtctaaggaggagcacgctgagcatttaaggattgtgttgcaagtcttgaa 16099875  T
Q  195 agagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  16099874 agagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgaatttccttggtcatgtgatttctaagggtggtatttatgtg 16099778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 14130528 - 14130238
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||| |||||||||||| ||||||| |||||||| |||| |||| || ||||||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  14130528 tatggatactatgagtattatgtgatgtcatttggattatccaatgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggacc 14130429  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| | ||||||||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||| | ||||||||| |||||    
T  14130428 gttttgtggtggtgtttagagatgatattttggtgtattcgaagtttgaggaggagcatgctgagcatttgaggattgtgttacgagtcttgaaggagaa 14130329  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||||    
T  14130328 ccagttatgtgctaagttgtctaagtgtgagttttggttgtgagaagtgagtttccttggtcatgtgatttctaaaggtggtatttctgtg 14130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 64 - 287
Target Start/End: Original strand, 23026010 - 23026233
Alignment:
Q  64 gaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtg 163  Q
    ||||| |||||||||||||||||||||| | || ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||| |     
T  23026010 gaatatatgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaagtctgaggaggagcatgctt 23026109  T
Q  164 agcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 263  Q
     |||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  23026110 cgcatttgaggattgtgttgcgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtca 23026209  T
Q  264 tgtgatttctaagggtggtatttc 287  Q
    ||||||||||||||||||||||||    
T  23026210 tgtgatttctaagggtggtatttc 23026233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 18836257 - 18836420
Alignment:
Q  128 ttttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtg 227  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttggaagagaaccagttatgtgctaagttatctaagtg 18836356  T
Q  228 tgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  18836357 tgagttttggttgaagggagtgagcttccttggtcacgtgatttctaagggtggtatttctgtg 18836420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 18578101 - 18577980
Alignment:
Q  168 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 267  Q
    |||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18578101 tttgaggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagtatgagttttggttgaaggaagtgagtttccttggtcatgtg 18578002  T
Q  268 atttctaagggtggtatttctg 289  Q
    ||||||||||||||||||||||    
T  18578001 atttctaagggtggtatttctg 18577980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 19985805 - 19985928
Alignment:
Q  168 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 267  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  19985805 tttgaggattgtgttgcaggtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagcgagttttcttggtcatgtg 19985904  T
Q  268 atttctaagggtggtatttctgtg 291  Q
    ||||||||||||||||||||||||    
T  19985905 atttctaagggtggtatttctgtg 19985928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 16234898 - 16234797
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16234898 ttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttggttgaaggaagggagtttcctgggtcatgtgatttctaagggtggtatttctg 16234799  T
Q  290 tg 291  Q
    ||    
T  16234798 tg 16234797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 190 - 285
Target Start/End: Complemental strand, 21929074 - 21928979
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
    ||||| ||||| ||||||||||| |||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  21929074 ttgaaggagaatcagttgtgtgctaagttgtcaaagtgtgagttttggttgcgggaagggagtttccttggtcatgtgatttctaagggtggtatt 21928979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 273
Target Start/End: Original strand, 22828690 - 22828849
Alignment:
Q  114 gttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcc 213  Q
    |||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||||    
T  22828690 gttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcc 22828789  T
Q  214 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  22828790 aaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 22828849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 271
Target Start/End: Complemental strand, 23080471 - 23080258
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | ||| || ||||| ||||| |||||||| |||||||||||| | || || |||||||||||||| |    
T  23080471 tttatggagtacatgaatcgcatttttcatgcatttctagatcgtttcgtggttgtgttcatcgatgatattttgatttactccaagtctgaggaagaac 23080372  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||||||| |||||| ||||||||  ||||||||||  |  | | ||| || || || |||| ||| || |||||||| || |||||||||||    
T  23080371 atgctgagcatttgaagattgttttgcaagtgctgaaagagaagaaactttatgctaaattatcaaagtttgaattctggttgaaagaggtgagtttcct 23080272  T
Q  258 tggtcatgtgattt 271  Q
    ||| ||||| ||||    
T  23080271 tggccatgttattt 23080258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 19881317 - 19881085
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||||| || |||||| |||| |||||    |||||||| |||||||| ||||| |||||| | |||||    
T  19881317 ctaatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattc 19881218  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||||||||||||||  || ||| |||||||||| |||||||| |||||||||||  |  ||| |||||| ||||| ||||| ||||| |||||     
T  19881217 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaaactgtatgccaaattgtcaaagtgcgagttctggtta 19881118  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  19881117 agtgaagtgagttttcttggccatattatttct 19881085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 61 - 273
Target Start/End: Original strand, 34643868 - 34644080
Alignment:
Q  61 atggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatg 160  Q
    ||||| || ||||||||||| |||||| ||||||||||    |||||||| |||| ||| ||||| |||||| | ||||| |   | |||||||||||||    
T  34643868 atggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagcatg 34643967  T
Q  161 gtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
      || ||| | || |||||||||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| ||||| |  ||||| |||||||||||    
T  34643968 cagaacatctaagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaagtttccttgg 34644067  T
Q  261 tcatgtgatttct 273  Q
     ||| | ||||||    
T  34644068 ccatattatttct 34644080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 23085993 - 23086180
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||| ||||| |||||||| ||||||||| | || |||||| | ||| |||| |    
T  23085993 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatc 23086092  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagt 188  Q
    | || ||||| |||||||| |||||||||||| | || || |||| ||| ||||| |||| ||||||||||| |||||| ||||||||    
T  23086093 gcttcgtggttgtgttcatcgatgatattttgatatactctaagtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 2873127 - 2873296
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||||||  |||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| ||||| |||||      
T  2873127 tttgtggttatgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaggagaaga 2873226  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    || | | ||| || |||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||    
T  2873227 agctttatgctaaattgtctaagtgtgaattttggttgaaagaagtgagtttccttggccatgttatttc 2873296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 273
Target Start/End: Original strand, 18965629 - 18965789
Alignment:
Q  113 tgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgc 212  Q
    ||||||| |||||||||||| | ||| | |||||||| ||||| |||  ||||||||||| |||||| || |||||  ||||||||||  |||| | |||    
T  18965629 tgttcattgatgatattttgatatatgctaagtctgaagaagaacattctgagcatttgaagattgtttttcaagtgatgaaagagaagaagttatatgc 18965728  T
Q  213 caagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
     |||||||| |||||||| || |||||||| || |||||||||||||| ||| | ||||||    
T  18965729 taagttgtcaaagtgtgaattctggttgaatgaggtgagtttccttggccatattatttct 18965789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 14378178 - 14378397
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||| ||||||    |||||||| || || || ||||||| | || | |||||    
T  14378178 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattc 14378277  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| || |||||||  |||||| ||| |||||| ||||||||||||||||||||  |||||| |||||||||||| || ||||||||||||||     
T  14378278 taagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggtta 14378377  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  14378378 agtgaagtaagttttcttgg 14378397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 14379728 - 14379947
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||| ||||||    |||||||| || || || ||||||| | || | |||||    
T  14379728 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattc 14379827  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| || |||||||  |||||| ||| |||||| ||||||||||||||||||||  |||||| |||||||||||| || ||||||||||||||     
T  14379828 taagactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggtta 14379927  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  14379928 agtgaagtaagttttcttgg 14379947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 274
Target Start/End: Original strand, 24294106 - 24294277
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  24294106 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 24294205  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 274  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||||    
T  24294206 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttcta 24294277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 273
Target Start/End: Original strand, 18196049 - 18196227
Alignment:
Q  95 tggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
    |||| ||||||||||| ||||||||  ||||||||||| | || || ||||| || |||||||||| | ||||||||| |||||| ||||||||  ||||    
T  18196049 tggatcgttttgtggttgtgttcatttatgatattttgatatactccaagtccgaagaagagcatgctaagcatttgaagattgttttgcaagtgctgaa 18196148  T
Q  195 agagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||  || | | ||| || ||||| |||| ||| ||||||||||| || |||| ||| ||||| ||||| ||||||    
T  18196149 agagaagaagctatatgctaaattgtcaaagtatgaattttggttgaaagatgtgaattttcttggccatgttatttct 18196227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 18796709 - 18796496
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||| ||| ||||| || ||||| || ||||| ||||| || ||| | ||||||||    |||||||| || ||||| ||| | |||||| | |||||    
T  18796709 ctaatgtgcctggtgtgttcatggagtatatgaacagaattttccatgcctatctggataaatttgtggttgtattcattgataacattttgatctattc 18796610  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||| ||||||||||  || ||| ||| ||||||||||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  18796609 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 18796510  T
Q  241 aaggaagtgagttt 254  Q
    || |||||||||||    
T  18796509 aatgaagtgagttt 18796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 18406166 - 18406438
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || |||||||| ||||||||| | || |||||| | | | |||| |    
T  18406166 tatggacattatgagtataaggtgatgccgttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatc 18406265  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||| || ||||| |||||||||||| | || || ||| |||| ||||| |||| |||||||||||   | || |||||||| |||||||||||    
T  18406266 gttttgtggttgttttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatttgaaactggttttgcaagtgttgaaagagaa 18406365  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      |  | | ||| || |||| ||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  18406366 gaaactatatgctaaattgtttaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 18406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 16925965 - 16926132
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |      
T  16925965 gtggttgttttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 16926064  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||||||||| ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  16926065 tttatgccaagttatctaagtgtgaattctggttgaaagaggtaagttttcttggccatgtcatttct 16926132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 20634219 - 20634434
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || || |||||| | ||||| |    
T  20634219 tttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttattgatgatattttgatttactccaagtctaaagaagaac 20634318  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| |||||||| || ||    
T  20634319 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 20634418  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  20634419 tggacatgttatttct 20634434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 5837543 - 5837713
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| || ||||| || || ||| || | ||||| ||| |||||||||| |||| ||||||| ||| || ||| |||||||| |||||||| ||      
T  5837543 tttgtggttgtcttcattgacgacattctgatttattccaagactgaggaagaacatgttgagcatctgaagactgttttgcaagtgttgaaagaaaaga 5837642  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | |||||||||||||||||||||||| |||||||| || || ||||| ||||| || || ||||||    
T  5837643 agctttatgccaagttgtctaagtgtgagttctggttgaaagaggtaagttttcttggccacgttatttct 5837713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 22760798 - 22760947
Alignment:
Q  122 atgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 221  Q
    ||||||||||| | || || |||||||| |||||||||| ||||||||||| | | || ||| |||| |||||||||||  || | | ||| || |||||    
T  22760798 atgatattttgatttactccaagtctgaagaagagcatgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtc 22760897  T
Q  222 taagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
    ||||||||| || |||||||| |||||||| || ||||| ||||| ||||    
T  22760898 taagtgtgaattctggttgaaagaagtgagctttcttggacatgttattt 22760947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 272
Target Start/End: Original strand, 28261530 - 28261690
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28261530 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28261629  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    |||| |||||||||||||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  28261630 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggccatgttatttc 28261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 272
Target Start/End: Complemental strand, 28284386 - 28284226
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28284386 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28284287  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    |||| |||||||||||||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  28284286 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggccatgttatttc 28284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 272
Target Start/End: Original strand, 28340279 - 28340439
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  28340279 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 28340378  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    |||| |||||||||||||| || |||||||| ||||||||||||| ||| ||||| |||||    
T  28340379 ccaaattgtctaagtgtgaattctggttgaaagaagtgagtttccctggccatgttatttc 28340439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 272
Target Start/End: Complemental strand, 25114499 - 25114340
Alignment:
Q  113 tgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgc 212  Q
    ||||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||     
T  25114499 tgttcatcgatgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgt 25114400  T
Q  213 caagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    ||| || ||||||||||| || |||||||| || |||||||| ||||| ||||| |||||    
T  25114399 caaattatctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttatttc 25114340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 27564160 - 27564327
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| |||||||| ||||| |||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |      
T  27564160 gtggttgtgttcatcgatgaaattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 27564259  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||| || || ||||||||||| || |||||||| ||||| ||||| ||||| ||||| ||||||    
T  27564260 tttatgctaaattatctaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 27564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 24366431 - 24366233
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||| ||||||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  24366431 ctaatgtgccaggtgtatttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 24366332  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     |||  |||||| |||||||  |||||  |||| ||||| |||||||| ||||| || ||   ||||| ||| |||||||| ||||||||||| |||||    
T  24366331 caagaatgaggaggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaagtgtgagttctggtt 24366233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 19454981 - 19454824
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| || || || ||||| || ||| | ||||||||| || | ||||||||||  |||||| ||| ||| || |||||||| |||||||| ||      
T  19454981 tttgtggttgtatttattgatgacatcttgatttattcaaagactaaagaagagcatgcagagcatctgaagatagtattgcaagttttgaaagaaaaga 19454882  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  19454881 agttgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttttcttgg 19454824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 19487504 - 19487766
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  |||||||||| ||||| |||||||| ||||||||||          | ||||| |||| |    
T  19487504 tatggacattacgaatattcagtgatgcctttcggtgttactaatgcgcctggtgtgtttatggagtacatgaata----------tgcttatttggatc 19487593  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | |||||||| || || || ||||| || ||| | ||||| |||||||| ||||||||||  |||||||| | ||||||||||||||| ||||| |  ||    
T  19487594 ggtttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaaggtaaa 19487693  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      |||||| |||||||||||| || ||||| || ||||| |  ||||| ||||| ||||| ||| | ||||||    
T  19487694 gaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattatttct 19487766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 14643721 - 14643817
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtgg 112  Q
    |||||||||||||||||||| ||  || ||||||  |||||||| |||||||| ||||||||||| || ||||||||| |||| |  ||||||||||    
T  14643721 tattctgtgatgccatttggtgttactgatgcgcatggtgtcttcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtgg 14643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 25608203 - 25608355
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || |||||||| |||||  ||| ||||||||||| |||||| || ||||| |||||||||||  || | | ||| || ||||    
T  25608203 gatgatattttgatttactccaagtctgaagaagaagatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctttatgctaaattgt 25608302  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | |||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  25608303 caaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 25608355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 16961809 - 16961976
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |      
T  16961809 gtggttgttttcattgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 16961908  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||||||||  ||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  16961909 tttatgccaagtcatctaagtgtgaattctggttgaaagaggtaagttttcttggccatgtcatttct 16961976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23025968 - 23026007
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtat 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23025968 tatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 28281075 - 28281297
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  28281075 ctaacgcgccgggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 28281174  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| | ||||||||  || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || ||||| |||||| |     
T  28281175 gaagactgaaggagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgaattttggcta 28281274  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    |  ||||||||||||||||||||    
T  28281275 agtgaagtgagtttccttggtca 28281297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 18450547 - 18450290
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 115  Q
    |||| ||||||||| || || ||  |||||||||  || || ||||||||||| || ||  | || |||||| ||||||| || |||||||| || ||||    
T  18450547 tattttgtgatgcctttcggtgttactaatgcgctgggagtatttatggaatatattaaccgtatttttcatacttatctagatcgttttgttgttgtgt 18450448  T
Q  116 tcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 215  Q
    | |||||||||||| || | || || || |   |||| || ||||  ||||||||||| ||||| ||||||||  |||| | |||  |||| | ||||||    
T  18450447 ttatagatgatattctgatatactctaaattcaaggaggaacatgtcgagcatttgagaattgttttgcaagtgctgaaggggaagaagttatatgccaa 18450348  T
Q  216 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| || ||||| || || |||||||| |||| |||||| ||||||||| | ||||||    
T  18450347 gttatcgaagtgcgaattctggttgaacgaagggagttttcttggtcatattatttct 18450290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 25769863 - 25769644
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| |||||| |||    |||||||| ||||| || ||||||||  |  | |||||    
T  25769863 ctaatgcgcctggtgtatttatggagtatatgaaccgaattttccatgcttatccggataaatttgtggttgtgtttattgatgatatcctaatttattc 25769764  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||| ||| ||||||||||  |||||| ||| ||||||||||||||| |||||| | |   |||||| ||| |||||||| || ||||| || |||||     
T  25769763 taagtatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaataaatgaagttgtatgctaagttgtccaaatgtgaattctggtta 25769664  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  25769663 agtgaagtaagttttcttgg 25769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 263
Target Start/End: Original strand, 10467173 - 10467333
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||| |||||||| || ||||||||| |  | ||||| |||  ||| || |||||||  |||||| |||| ||||| |||||||| |||||||| ||      
T  10467173 tttgttgtggtgtttattgatgatattctaatctattccaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaaga 10467272  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 263  Q
     ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || |||||    
T  10467273 ggttgtatgcaaagttgtcaaaatgtgagttctggttaagcgaagtgagttttctgggtca 10467333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 27189279 - 27189224
Alignment:
Q  217 ttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    ||||| |||||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  27189279 ttgtccaagtgtgaattctggttgaaagaagtgagtttccttggccatgttatttc 27189224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 27259961 - 27260016
Alignment:
Q  217 ttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    ||||| |||||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  27259961 ttgtccaagtgtgaattctggttgaaagaagtgagtttccttggccatgttatttc 27260016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 19866644 - 19866474
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| || || || |||||||||||| | || || ||| ||||  |||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  19866644 tttgtggttgtttttatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaaga 19866545  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| ||  | |||||| ||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  19866544 aactttatgctaaactatctaagcgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 19866474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 19436916 - 19436808
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||||||||  || ||| ||| ||||||||||||| |  | ||||||||  |||||| ||| |||||||| ||||||||||| || || |  ||    
T  19436916 ctgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaagagttgtatgctaagttgtcgaagtgtgagttctgcttaagtga 19436817  T
Q  246 agtgagttt 254  Q
    |||||||||    
T  19436816 agtgagttt 19436808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 283; Significance: 1e-158; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 21935447 - 21935737
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21935447 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 21935546  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21935547 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 21935646  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21935647 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 21935737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 24583319 - 24583032
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583319 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 24583220  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  24583219 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtttgaggaagagcatgctgagcatttgagaattgtgttgcaagtcttgaaagagaa 24583120  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttct 288  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583119 ccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttct 24583032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 23507793 - 23507503
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507793 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 23507694  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  23507693 gttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaa 23507594  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23507593 ccagtgatgtgcaaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtg 23507503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 23505164 - 23505063
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||| ||||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23505164 ttgaaggagaatcggttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatg 23505065  T
Q  290 tg 291  Q
    ||    
T  23505064 tg 23505063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 20466358 - 20466630
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| ||||| ||  ||||||| || ||||| |||||| | ||||||||| | || |||||| | ||| | || |    
T  20466358 tatggacattacgaatattcagtgatgccttttggtgttactaatgcaccgggtgtgtttatgaagtacatgaatcgtatttttcatgcgtatttagatc 20466457  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | || ||||| ||| |||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||    
T  20466458 gcttcgtggttgtgatcatcgatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaa 20466557  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      |||| | |||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| ||||||    
T  20466558 gaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttct 20466630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 23473312 - 23473082
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| | |||||| ||||||||| | || |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| |||| ||||    
T  23473312 aatgcgccaggtgtgtctatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatgtactcaa 23473213  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    ||||||| ||||| |||| ||||| ||| |   |||| ||||||||  ||||||||||  |||| | ||| || ||||| ||||||||||| | ||||||    
T  23473212 agtctgaagaagaacatgctgagcgtttaaaagttgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgagttctagttgaa 23473113  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || |||||||| ||||| ||||| ||||||    
T  23473112 tgaggtgagttttcttggccatgttatttct 23473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 21409246 - 21408992
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 115  Q
    |||||||||||||| || || ||   |||||||||||| || ||||||||||| |||||| | || |||||| ||||||| || |||||||| || ||||    
T  21409246 tattctgtgatgcctttcggtgttattaatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgt 21409147  T
Q  116 tcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 215  Q
    | |||||||||||| ||   || || ||||||||||| || ||||  ||||||||||| ||||| ||||||||  |||   ||||  | || | ||||||    
T  21409146 ttatagatgatattctgaaatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctga---agaagaatttatatgccaa 21409050  T
Q  216 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| || ||||| || || |||||||| ||||||||||| ||||||||| | ||||||    
T  21409049 gttatcgaagtgcgaattctggttgaacgaagtgagttttcttggtcatattatttct 21408992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 17267633 - 17267865
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| | | ||||||    ||||||||||| || || ||||||||| || | |||||    
T  17267633 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaatttgtggtggtatttattgatgatattctgatttattc 17267732  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    |||| |||| ||||||||||  || ||  |||| |||||||||||||| |||||||| ||  |||||| |||||| ||||| || ||| |||||||| |     
T  17267733 aaagactgaagaagagcatgcagaacacctgagaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaaattgtcgaaatgtaagttttggcta 17267832  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  17267833 agtgaagtgagtttccttggtcatattatttct 17267865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 115 - 271
Target Start/End: Complemental strand, 22349932 - 22349776
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  22349932 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 22349833  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||    
T  22349832 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 22349776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 21679077 - 21679309
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| ||||||  ||| || ||    |||||||| || ||||| ||||| |||||| | |||||    
T  21679077 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgtttacctagataaatttgtggttgtattcattgatgacattttgatctattc 21679176  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||||||||||||||  || |||  ||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  21679177 gagaactgaggaagagcatgcagaacatccgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 21679276  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  21679277 agtgaagtgagttttcttggccatattatttct 21679309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 272
Target Start/End: Complemental strand, 40710805 - 40710636
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||      
T  40710805 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 40710706  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    || | | ||| || |||||||||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  40710705 agctttatgctaaattgtctaagtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 40710636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 22331248 - 22331399
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  22331248 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22331347  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    || | | ||| || |||||||||||||| || |||||||| |||||||||||    
T  22331348 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttt 22331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 25428503 - 25428288
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | ||||||| || ||||| || || || |||||||||||| | || || |||||||| ||||| |    
T  25428503 tttatggagtacatgaatcgcatctttcatgcatttttggaccgattcgtggttgtttttattgatgatattttgatttactccaagtctgaagaagaac 25428404  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| |||||||||||   | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || | |||||| |||||||| || ||    
T  25428403 atgctgagcatttgaatctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctagttgaaagaagtgagctttct 25428304  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  25428303 tggacatgttatttct 25428288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 14998100 - 14998270
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| || || |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  14998100 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 14998199  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  14998200 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 14998270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 37289857 - 37290027
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  37289857 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 37289956  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  37289957 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 37290027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 271
Target Start/End: Complemental strand, 19771985 - 19771817
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| |||||||| || ||||| ||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||      
T  19771985 tttgtggttgtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaaga 19771886  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||    
T  19771885 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttattt 19771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 273
Target Start/End: Complemental strand, 27612376 - 27612209
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |      
T  27612376 gtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaac 27612277  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  27612276 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 27612209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 22136693 - 22136523
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || || |||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  22136693 tttgtggttgtgtttatcgacgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 22136594  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  22136593 aactttttgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 22136523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 26737028 - 26737258
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    ||||| || ||||| |||||||| |||||||||  ||| |||||| | | | | || ||||| ||||| |||||||| |||||||||||| | || || |    
T  26737028 aatgcacctggtgtgtttatggagtacatgaatcaaatttttcatgcatttttagatcgtttcgtggttgtgttcatcgatgatattttgatttactcca 26737127  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    |||| || ||||| |||| ||| ||||||| |||| | ||||||||  ||||||| ||  |||| | ||| || || || |||||||| || ||||||||    
T  26737128 agtccgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagataagaagttatatgctaaattatcaaagtgtgaattctggttgaa 26737227  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || || ||||| ||||| ||||| ||||||    
T  26737228 agaggtaagttttcttggccatgttatttct 26737258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 272
Target Start/End: Original strand, 27666854 - 27667020
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| |||||||| || ||||| ||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| || ||||| |||||||||||  |      
T  27666854 gtggttgtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaac 27666953  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  27666954 tttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 27667020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 273
Target Start/End: Complemental strand, 16358506 - 16358357
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  16358506 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16358407  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  16358406 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 16358357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 21337595 - 21337752
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||||||||||||| | || |||||| | | | ||||  | || ||||| || ||||| || ||||||||| | || || |    
T  21337595 aatgcgccaggtgtgtttatggaatacatgaatcgtatttttcatgcgtttttggatagcttagtggttgtattcatcgacgatattttgatttactcca 21337694  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||| ||| ||||| |||| |||||| |||| |||||| ||||||||  ||||||||||    
T  21337695 agtttgaagaagaacatgctgagcacttgaagattgttttgcaagtgctgaaagagaa 21337752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 273
Target Start/End: Complemental strand, 34568498 - 34568349
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  34568498 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 34568399  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  34568398 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 34568349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 18781096 - 18780969
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || || ||||||||    
T  18781096 ctgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttttgcgaaattgtctaagtgtgaattctgattgaagga 18780997  T
Q  246 agtgagtttccttggtcatgtgatttct 273  Q
    ||| ||||| ||||| ||||| ||||||    
T  18780996 agtaagttttcttggccatgttatttct 18780969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 14885290 - 14885512
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||||||||| || || |||||||| ||  | |||||    
T  14885290 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatatcttaatttattc 14885389  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| || || |  |||||| |||| || ||||||||||| ||||| || ||   ||||| ||| |||||||| || |||||||| |||||     
T  14885390 caagaatgaggaggaacacgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttgtcaaaatgtgagttctggtta 14885489  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| |||||||| |||||    
T  14885490 aatgaagtaagtttcctgggtca 14885512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 257
Target Start/End: Complemental strand, 20823460 - 20823306
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||||||||| ||||||||||| ||| | ||||||||  |||| || || || |  || ||  ||| ||||||||||||  | ||||||||||       
T  20823460 tttgtggtggtgtttatagatgatatattgatctattcaaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaa 20823361  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||||||    
T  20823360 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcct 20823306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 22463958 - 22463788
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||||||||| || ||||||||||||||| | ||||| ||  |||| || |||||||  || || |||| ||||||||||||  | ||||| ||||       
T  22463958 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgcagattttgaaggagagaa 22463859  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||| |||||||||||| ||||  ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  22463858 agttgtatgccaagttgtcgaagtacgagttctggttaagtgaagtgagttttctaggccatgttatttct 22463788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 27520431 - 27520261
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||  | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||      
T  27520431 tttgtggttgtgtttatcgacgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 27520332  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  27520331 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 27520261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 29474434 - 29474604
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  29474434 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 29474533  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||  || || || |||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  29474534 aactttatgataaattatcgaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 29474604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 41772867 - 41772697
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||| ||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||      
T  41772867 tttgtggttgtgtttatcgacgatatcttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaaga 41772768  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || | ||| || |||||||| ||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  41772767 atttttatgctaaattgtctaaatgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 41772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20250543 - 20250656
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||| | | ||||||||||| ||| |||| | | |||||  |||||||||||| |||||||| || || ||||||||| |||| |    
T  20250543 tatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaatatatgaataggattttccatccttatttggatc 20250642  T
Q  101 gttttgtggtggtg 114  Q
      ||||||||||||    
T  20250643 aatttgtggtggtg 20250656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 20801404 - 20801252
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||  | || || ||| |||| ||||| |||| ||||||| ||| |||||| ||||||||  ||||||||||  |  | | ||| || || |    
T  20801404 gatgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgctgaaagagaagaaactttatgctaaattat 20801305  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||| |||||||| || || ||||||||||| ||||| ||||||    
T  20801304 ctaagtgtgagttctggttgaaagaggtaagtttccttggccatgtcatttct 20801252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 239
Target Start/End: Complemental strand, 20344340 - 20344153
Alignment:
Q  52 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 151  Q
    ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | ||||| |||  ||| |    
T  20344340 ggtgtgtttatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattccaagaatgaag 20344241  T
Q  152 aagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    | |||||||  |||||| |||| ||||| |||||||| |||||||||||   ||||| ||| |||||||| || |||||||| |||||    
T  20344240 aggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaagaggttgtatgctaagttgtcaaaatgtgagttctggtt 20344153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 263
Target Start/End: Complemental strand, 22504737 - 22504526
Alignment:
Q  52 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 151  Q
    ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | ||||| |||   || |    
T  22504737 ggtgtgtttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattctaagaacgaag 22504638  T
Q  152 aagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 251  Q
    | |||||||  |||||| |||| ||||| |||||||| |||||||||||   ||||| ||| |||||||| || |||||||| ||||| |  ||||||||    
T  22504637 aggagcatgcagagcatctgagaattgtattgcaagttttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgag 22504538  T
Q  252 tttccttggtca 263  Q
    ||| || |||||    
T  22504537 ttttctgggtca 22504526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 27683761 - 27683912
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||  |||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||| ||||||      
T  27683761 tttgtggttgtgtttatcgacaatattttgatttactccaagactgacgaagaacatgctgagcatctgaagattgttttgcaagtgttgagagagaaga 27683860  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    || | | ||| || |||||||||||||| || ||||| || |||||||||||    
T  27683861 agctttatgctaaattgtctaagtgtgaattctggttcaaagaagtgagttt 27683912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 24796696 - 24796849
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || ||||||||| |  | |||||    
T  24796696 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatttattc 24796795  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
     |||  |||||| |||||||  |||||| |||| || ||||||||||| |||||    
T  24796796 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 24796849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 20777849 - 20777757
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgt 266  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  |||||||||||||| || |||||    
T  20777849 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccatgt 20777757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 28893374 - 28893473
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28893374 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28893473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 28914845 - 28914944
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28914845 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28914944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 28922200 - 28922299
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28922200 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28922299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 28930113 - 28930212
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  28930113 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgtcatttct 28930212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 25850144 - 25849922
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| |||||||| ||||||||   ||| || ||| ||| ||||||    ||||| || |||||||| |||||||| ||| | |||||    
T  25850144 ctaacgcgcctggtgtatttatggagtacatgaaccaaatcttccatgcttttctggataagtttgttgtagtgttcattgatgatatcttgatttattc 25850045  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| || |||||||  |||||| |||| || || |||||||| ||||| || ||   ||||| ||| |||||||| || |||||||| |||||     
T  25850044 gaagaatgaagaggagcatgcagagcatctgagaatagtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctggtta 25849945  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    |  ||||||||||| || |||||    
T  25849944 agtgaagtgagttttctgggtca 25849922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 21562323 - 21562476
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||| | ||||| |||||||| |||||||||||||| || ||| | ||| | ||  | ||||| || ||||| |||||||| ||  || | |||||    
T  21562323 ctaatgcgtctggtgtgtttatggagtacatgaatagaattttccatgcctatttagattggtttgtagttgtgtttatagatgacatcctgatttattc 21562422  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
     ||| |||| ||||||||||  |||||||| |  |||||||| ||||| |||||    
T  21562423 taagactgaagaagagcatgcagagcatttaaaaattgtgtttcaagtgttgaa 21562476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 24618704 - 24618792
Alignment:
Q  151 gaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    ||||||||||  |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| |||||    
T  24618704 gaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggtt 24618792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 24714935 - 24715023
Alignment:
Q  151 gaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    ||||||||||  |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| |||||    
T  24714935 gaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggtt 24715023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 24747963 - 24748051
Alignment:
Q  151 gaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    ||||||||||  |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| |||||    
T  24747963 gaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggtt 24748051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 8272715 - 8273005
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272715 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 8272814  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8272815 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 8272914  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8272915 ccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 8273005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 30139630 - 30139340
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139630 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 30139531  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30139530 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 30139431  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30139430 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 30139340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 30149181 - 30148891
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30149181 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 30149082  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30149081 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 30148982  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30148981 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 30148891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 13965668 - 13965959
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13965668 tatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 13965767  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaag-agcatggtgagcatttgaggattgtgttgcaagtcttgaaagaga 199  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  13965768 gttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagaagcatgctgagcatttgaggattgtgttgcaagacttgaaagaga 13965867  T
Q  200 accagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13965868 accagttgtctgccaatttgtctaagtgtgagttttggttgaaggaagtgagttttcttggtcatgtgatttctaagggtggtatttctgtg 13965959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 15611927 - 15611637
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15611927 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggacc 15611828  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| ||    
T  15611827 gttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtcttgcaagttttgaaagataa 15611728  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15611727 ccggttgtgtgccaagttgtctaagcgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 15611637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 25768142 - 25767852
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  25768142 tatggacactatgagtattctgtgatgccattcggagtatctaattcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggacc 25768043  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||| |||||||||||||||| |||||    
T  25768042 gttttgtggtggtgtttatagatgatattttggtgtattcaaaatctgagaaggagcatgctgagcatttgaggattatgttgcaagtcttgaaggagaa 25767943  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  25767942 ccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctcagggtggtatttatgtg 25767852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 6151169 - 6151459
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||    
T  6151169 tatggacactatgagtattttgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagacc 6151268  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||| ||||||| ||| ||||||||||||||| ||||| |||||    
T  6151269 gttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgaggaggagcatgctgagcatctgacgattgtgttgcaagtgttgaaggagaa 6151368  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6151369 ccagttatgtgctaagttgtctaagtgcgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 6151459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 15948786 - 15949036
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  15948786 tatggacactatgagtattccgtgatgccatttggagtatccaatgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggacc 15948885  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  15948886 gatttgtggtggttttcatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcatctgaggattgtgttgcaagtcttgaaagagaa 15948985  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 251  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  15948986 ccagttgtgagccaagttgtctaagtgtgaattttggttgaaggaagtgag 15949036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 12795871 - 12795770
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  12795871 ttgaaagagaaccaattgtgtgccaagttgtctaagtgtgagtcttggttgaaggaagtgagttttcttggtcatgtgatttctaagggtagtatttctg 12795772  T
Q  290 tg 291  Q
    ||    
T  12795771 tg 12795770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 133 - 272
Target Start/End: Original strand, 6710865 - 6711004
Alignment:
Q  133 gtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagt 232  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||||||  || ||||| ||||| ||||||| ||| |||||||||||||||||||    
T  6710865 gtgtattcaaagtcagaggaggagcatgctgagcatttgaggattgtgttgcgtgttttgaaggagaatcagttgtttgctaagttgtctaagtgtgagt 6710964  T
Q  233 tttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    |||||||   ||||||||||||||||||| ||||||||||    
T  6710965 tttggttttgggaagtgagtttccttggttatgtgatttc 6711004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 194 - 286
Target Start/End: Complemental strand, 16258774 - 16258682
Alignment:
Q  194 aagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 286  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16258774 aagagaatcagttgtgtgcaaagttgtctaagtgcgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 16258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 18915361 - 18915261
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||| |||||| |||| ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18915361 ttgaaggagaactagttatgtgctaagttgtccaagtgtgaattttggttgaaggaagtaagtttccttggtcatgtgatttctaagggtggtatttctg 18915262  T
Q  290 t 290  Q
    |    
T  18915261 t 18915261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 55514237 - 55514331
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 284  Q
    ||||| ||||| || || ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  55514237 ttgaaggagaatcatttatgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtat 55514331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 14088457 - 14088225
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  14088457 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 14088358  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||||||||||||||  || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  14088357 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 14088258  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  14088257 agtgaagtgagttttcttggccatattatttct 14088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 15261402 - 15261172
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    || |||| ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  || | | ||| || ||||  |||||||| || ||||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagaagctttatgctaaattgtaaaagtgtgaattctggttgaa 15261203  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || |||||||| ||||| ||||| ||||||    
T  15261202 agaggtgagttttcttggccatgttatttct 15261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 13970465 - 13970697
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  13970465 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 13970564  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||||||||||||||  || ||| ||||| |||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  13970565 gagaactgaggaagagcatgcagaacatctgagggttgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 13970664  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  13970665 agtgaagtgagttttcttggccatattatttct 13970697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 11950253 - 11950472
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||||||| || | |||||    
T  11950253 ctaatgcgcctggtgtgttcatggagtagatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattc 11950352  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||||||| ||||||||||||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |||||     
T  11950353 taagactgaagaagagcatgcagaacatttgaagattgtgttgcaagtattgaaagagaagaagttgtatgctaagttgtcgaagtgtgagttctggtta 11950452  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||||||||| |||||    
T  11950453 agtgaagtgagttttcttgg 11950472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 15340981 - 15340811
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||| ||| |||||||||||      
T  15340981 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttgaaagagaaga 15340882  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | |||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  15340881 aactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15340811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 15400935 - 15401105
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||| ||| |||||||||||      
T  15400935 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcgagtgttgaaagagaaga 15401034  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | |||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  15401035 aactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 15401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 17188158 - 17187939
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | ||| ||||    |||||||| || ||||| ||||| ||| || | |||||    
T  17188158 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctatttggataaatttgtggttgtattcattgatgacattctgatttattc 17188059  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    || | |||||||||||||||  || ||| |||  ||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  17188058 aaggactgaggaagagcatgcagaacatctgaaaattgtattgcaagtattgaaagagaaaaagttgtatgccaaattgtcgaagtgtgagttctggtta 17187959  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||||||||| |||||    
T  17187958 agtgaagtgagttttcttgg 17187939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 18751554 - 18751477
Alignment:
Q  214 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||| ||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  18751554 aagttgtcgaagtgtgagtttttgttgcgggaagtgagtttcctttgtcatgtgatttctaagggtggtatctctgtg 18751477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 52 - 273
Target Start/End: Complemental strand, 41179295 - 41179074
Alignment:
Q  52 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 151  Q
    ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | ||||| ||| |||| |    
T  41179295 ggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaagactgaag 41179196  T
Q  152 aagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 251  Q
    ||||||||   || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| | |  ||||||||    
T  41179195 aagagcattcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgag 41179096  T
Q  252 tttccttggtcatgtgatttct 273  Q
    ||||||||||||| | ||||||    
T  41179095 tttccttggtcatattatttct 41179074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 273
Target Start/End: Original strand, 20060462 - 20060642
Alignment:
Q  93 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttg 192  Q
    |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| |||||||| |||    
T  20060462 tctggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttg 20060561  T
Q  193 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||  |  | | |||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||||||    
T  20060562 aaagagaagaaactttatgccaaattgtctaagtgtgaattttggttgaaagaagtgagttttctaggccatgttatttct 20060642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 11889636 - 11889783
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||||||||| || ||||||||||||||| | || |||||| | ||| | || || || ||||| |||||||| |||||||||||| | || ||    
T  11889636 ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactc 11889735  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagt 188  Q
     |||| | ||||||| |||| ||||||||||| |||||| ||||||||    
T  11889736 taagtttaaggaagaacatgctgagcatttgaagattgttttgcaagt 11889783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 13254402 - 13254232
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  13254402 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 13254303  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  13254302 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 13254232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 15346663 - 15346832
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  15346663 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 15346762  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  15346763 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 15346832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 12358967 - 12359091
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||||||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |    
T  12358967 tattcaaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 12359066  T
Q  236 ggttgaaggaagtgagtttccttgg 260  Q
    |||| |  ||||||||||| |||||    
T  12359067 ggttaagtgaagtgagttttcttgg 12359091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 15723307 - 15723522
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| || |||||| | || |||||| | | | |||| || |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |    
T  15723307 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaac 15723406  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || ||||| |||||||| || |||||||| ||||||||||| ||    
T  15723407 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttttct 15723506  T
Q  258 tggtcatgtgatttct 273  Q
     || ||||| ||||||    
T  15723507 aggccatgttatttct 15723522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 273
Target Start/End: Original strand, 16379339 - 16379505
Alignment:
Q  107 tggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagtt 206  Q
    ||||||| || || ||||||||| || | ||||| ||| || | ||||||||||  || ||| |||| |||||||||||||| |||||||| ||  ||||    
T  16379339 tggtggtatttattgatgatattctgatttattctaagacttaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagaaaagaagtt 16379438  T
Q  207 gtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || |||||| ||||| || |||||||||||| | |  ||||| ||||||||||||||| | ||||||    
T  16379439 gtatgccaaattgtcaaaatgtgagttttggctaagtgaagtaagtttccttggtcatattatttct 16379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 6602439 - 6602278
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| | || ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  6602439 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgctgagcatctgacgattgtcttacaagtgttgaaagagaagaaactttatg 6602340  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||||| || |||||||| ||||||||||||||||| ||||| ||||||    
T  6602339 ctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttct 6602278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 10007303 - 10007142
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| |||  ||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  10007303 gtgttcatcgacgatattttgatttactccaagactgaagaagaacattctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatg 10007204  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  10007203 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 10007142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 10907913 - 10907752
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| |||  ||||||| ||| |||||| |||||||| |||||||||||  || | | ||    
T  10907913 gtgttcatcgacgatattttgatttactccaagactgaagaagaacattttgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatg 10907814  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  10907813 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 10907752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 230
Target Start/End: Complemental strand, 15229387 - 15229198
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    ||||||||||  |||| ||||||||||||||||||||||  || ||| ||||||| ||    |||||||| ||||| || |||||||| ||  | |||||    
T  15229387 ctaatgcgcctagtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattc 15229288  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 230  Q
     ||| |||| ||||||||||  |||||| |||  ||| |||||||||| |||||||| ||  |||||| ||||| |||||| || |||||    
T  15229287 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccatgttgtccaaatgtga 15229198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 230
Target Start/End: Complemental strand, 15235255 - 15235066
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    ||||||||||  |||| ||||||||||||||||||||||  || ||| ||||||| ||    |||||||| ||||| || |||||||| ||  | |||||    
T  15235255 ctaatgcgcctagtgtgtttatggaatacatgaatagaactttccatgcttatctagataaatttgtggttgtgtttattgatgatatcttaatttattc 15235156  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 230  Q
     ||| |||| ||||||||||  |||||| |||  ||| |||||||||| |||||||| ||  |||||| ||||| |||||| || |||||    
T  15235155 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccatgttgtccaaatgtga 15235066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 16693867 - 16693706
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| ||||| || |||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16693867 gtgtttatagacgaaattttgatatactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 16693768  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || ||||||||||||||||| |||||||| ||||| ||||| ||||||||||| ||||||    
T  16693767 ctaaattgtctaagtgtgagttctggttgaaagaagtaagttttcttggtcatgttatttct 16693706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 13943808 - 13943576
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  13943808 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 13943709  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| ||| || ||||||| |||||||| |   |||||| ||||||  |||| || |||||||||||| |     
T  13943708 gaagactgaagaagagcatgcagaacatctgagaattatgctgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggcta 13943609  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  13943608 agtgaagtgagtttccttggtcatattatttct 13943576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 15014072 - 15014344
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  |||| ||||| || || ||||||||||| |||||| | || |||||| ||||| |||| |    
T  15014072 tatggacattacgaatattcggtgatgcctttcggtgttactaacgcgcctggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatc 15014171  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | ||||| || ||||| |||||||||||| |  | || || ||| | ||||| || ||||  |||||||  || ||||| ||||||||  |||| |||||    
T  15014172 gatttgttgttgtgtttatagatgatattctaatatactctaagaccgaggaggaacatgccgagcattgtagaattgttttgcaagtgctgaaggagaa 15014271  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      |||| | ||||||||| || ||||| || || |||||||| ||||||||||| ||||| ||| | ||||||    
T  15014272 gaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttcttggccatattatttct 15014344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 273
Target Start/End: Original strand, 15587800 - 15587980
Alignment:
Q  93 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttg 192  Q
    |||||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||    
T  15587800 tctggatcggtttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgttgagcatctgaagattgtcttacaagtgttg 15587899  T
Q  193 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||  |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  15587900 aaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 15587980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 17491544 - 17491392
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||  | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  17491544 gatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 17491445  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  17491444 ctaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 17491392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 12180017 - 12179903
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||||||||  |||||| ||| ||||||||||||| | |||||||| ||  |||||| ||| |||||||| ||||||||||| ||||| |  ||    
T  12180017 ctgaagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattga 12179918  T
Q  246 agtgagtttccttgg 260  Q
    ||||||||| |||||    
T  12179917 agtgagttttcttgg 12179903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 28756102 - 28755880
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||| ||  | |||||    
T  28756102 ctaatgcgccgggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattc 28756003  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| |||||||||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  28756002 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 28755903  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  28755902 aatgaagtaagttttctgggtca 28755880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 273
Target Start/End: Complemental strand, 16637464 - 16637315
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  16637464 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16637365  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  16637364 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 16637315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 16834950 - 16835087
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| || |||||||  || ||| |||||||||| |||||||| |||||||| ||  |||||| |||||| ||||| || ||||||||||    
T  16834950 tattctaagactgacgaggagcatgcagaacatctgaggattgtattgcaagtattgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagtttt 16835049  T
Q  236 ggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | |  ||||||||||||||||| ||| | ||||||    
T  16835050 ggctaagtgaagtgagtttccttggccatattatttct 16835087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 273
Target Start/End: Complemental strand, 48427138 - 48426989
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||    
T  48427138 gatattttgatctactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtcta 48427039  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  48427038 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 48426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 272
Target Start/End: Original strand, 5109038 - 5109198
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||| ||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||| ||  || | | ||    
T  5109038 gtgttcatcgacgatatcttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagaaaagaagctttatg 5109137  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  5109138 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 5109198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 272
Target Start/End: Complemental strand, 12888412 - 12888252
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| ||||  |||||  ||| |||||| || ||||| |||||||||||  |  | | ||    
T  12888412 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgccgagcacctgaagattgtcttacaagtgttgaaagagaagaaactttatg 12888313  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | || |||||||||||||| || |||||||| ||||||||||| ||||| ||||| |||||    
T  12888312 caaaattgtctaagtgtgaattctggttgaaagaagtgagtttacttggccatgttatttc 12888252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 14874935 - 14875087
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || || |    
T  14874935 gatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattat 14875034  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||| |||||||| ||||| ||||| ||||| | ||| ||||||    
T  14875035 ctaagtgtgagttctggttgaaagaagtaagttttcttggccttgttatttct 14875087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 44779031 - 44778799
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| |  |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||| ||| || | |||||    
T  44779031 ctaacgcgcccggtgtattcatggagtttatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattc 44778932  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||||||||||| |||||||| |   | |||| ||||||  |||| || |||||||||||| |     
T  44778931 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaaattgtatgccaaactgtcgaaatgtgagttttggcta 44778832  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  44778831 agtgaagtgagtttccttggtcatattatttct 44778799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 11959514 - 11959736
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| ||||||||||| |||||||| || || ||| ||| ||||||    ||| | || ||||| || |||||||||||  | |||||    
T  11959514 ctaatgcgcctggtgtgtttatggaatatatgaataggattttccatgcttttctggataaatttctagttgtgtttattgatgatattttaatctattc 11959613  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| || |||||||  |||||| |||| ||||| |||||||| |||||||| ||   ||||| ||| |||||||| || ||||| || |||||     
T  11959614 caagaatgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgaattctggtta 11959713  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    |  ||||||||||| || |||||    
T  11959714 agtgaagtgagttttctgggtca 11959736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 16328067 - 16328237
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||| |||||||| || |||||||||||  | ||||| |||  ||| || |||||||  |||||| |||| ||||| |||||||  |||||||||||      
T  16328067 tttgttgtggtgtttattgatgatattttaatctattctaagaatgaagaggagcatgcagagcatctgagaattgtattgcaagatttgaaagagaaga 16328166  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
     ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || |||||| | ||||||    
T  16328167 ggttgtatgcaaagttgtcaaaatgtgagttatggttaagtgaagtgagttttctgggtcatattatttct 16328237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 272
Target Start/End: Original strand, 53383439 - 53383605
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||  || ||| ||| |||||| || || || |||||||||||  |      
T  53383439 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcggaacatctgaagattgtcttacaggtgttgaaagagaagaaac 53383538  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  53383539 tttatgctaaattgtctaagtgtgaattctggttgaatgaagtgagtttccttggccatgttatttc 53383605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 16805419 - 16805536
Alignment:
Q  157 catggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcc 256  Q
    |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||||| ||||| |    
T  16805419 catgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttc 16805518  T
Q  257 ttggtcatgtgatttcta 274  Q
    |||| ||||| |||||||    
T  16805519 ttggccatgttatttcta 16805536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 272
Target Start/End: Complemental strand, 3687646 - 3687486
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  3687646 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 3687547  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | || || ||||||||||| || |||||||| ||||||||||| || |||||||| |||||    
T  3687546 ctaaattatctaagtgtgaattctggttgaaagaagtgagttttctaggtcatgttatttc 3687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 55498570 - 55498486
Alignment:
Q  107 tggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtctt 191  Q
    |||||||||| || |||||||| || |||||||| ||||| |||||  ||||||  |||||||| ||||||||||||||| ||||    
T  55498570 tggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagagcatttcaggattgtgttgcaaatctt 55498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 272
Target Start/End: Original strand, 5423358 - 5423517
Alignment:
Q  113 tgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgc 212  Q
    ||||||| || ||||| ||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| || ||||| |||||||||||  |  | | |||    
T  5423358 tgttcatcgacgatatcttgatttactctaagactgaagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgc 5423457  T
Q  213 caagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
     || |||||||||||||| || | |||||| ||||||||||||||||| ||||| |||||    
T  5423458 taaattgtctaagtgtgaattcttgttgaatgaagtgagtttccttggccatgttatttc 5423517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 10418452 - 10418603
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||||||||| || ||||||||||| ||| | ||||||||  |||| || || || |  || ||  ||| ||||||||||||| | ||||||||||       
T  10418452 tttgtggtggtatttatagatgatatcttgatctattcaaaaactgaagaggaacacgccgaacacctgaagattgtgttgcaaatattgaaagagagga 10418551  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    |||||| ||||||| |||| ||||| ||||| ||||| || |||||||||||    
T  10418552 agttgtatgccaagctgtcgaagtgcgagttctggttaaatgaagtgagttt 10418603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 13952377 - 13952283
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 284  Q
    ||||| |||||  |||||| ||| |||| ||| |||||||||||||||||| |  |||||||||| |||  |||||||||||| ||| |||||||    
T  13952377 ttgaaggagaagaagttgtttgctaagtcgtcaaagtgtgagttttggttgcaaaaagtgagttttcttaatcatgtgatttcgaagagtggtat 13952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 47125728 - 47125575
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || ||||||||| |  | |||||    
T  47125728 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatctattc 47125629  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
     |||  |||||| |||||||  |||||| |||| || ||||||||||| |||||    
T  47125628 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaa 47125575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 55498734 - 55498665
Alignment:
Q  117 catagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaa 186  Q
    |||||||||||| || ||||||| |||||| ||||| |||| ||  ||||||||||||||| ||||||||    
T  55498734 catagatgatatcttagtgtattgaaagtcggaggaggagcttgtggagcatttgaggattttgttgcaa 55498665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 10385393 - 10385257
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||| ||||||||||| |||||||| ||| | ||||| |||   |||||||||||||  | |||| |||| ||||| |||||||| ||||| || ||      
T  10385393 tttgttgtggtgttcattgatgatatcttgatttattccaagaacgaggaagagcatgcagggcatctgagaattgtattgcaagtgttgaaggaaaaga 10385294  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     ||||| ||| |||||||| || |||||||| |||||    
T  10385293 ggttgtatgctaagttgtcaaaatgtgagttctggtt 10385257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 254
Target Start/End: Original strand, 13318828 - 13319060
Alignment:
Q  22 gtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatag 121  Q
    ||||||||||| || ||  |||||||||| ||||| || ||||| || |||||  |||| |||||| ||| ||||||    ||||||||||| || || |    
T  13318828 gtgatgccattcggtgttactaatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaatttgtggtggtatttattg 13318927  T
Q  122 atgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 221  Q
    ||||||||||  | ||||| ||| || | || |||||||  || ||| ||| |||| |||||||| | ||||||||||   | |||| ||| || |||||    
T  13318928 atgatattttaatttattccaagactaaagaggagcatgcagaacatctgaagattatgttgcaaattttgaaagagagaaatttgtatgctaaattgtc 13319027  T
Q  222 taagtgtgagttttggttgaaggaagtgagttt 254  Q
     ||||| ||||| ||||| |  |||||||||||    
T  13319028 gaagtgcgagttctggttaagtgaagtgagttt 13319060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 20829541 - 20829831
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829541 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 20829640  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20829641 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 20829740  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20829741 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 20829831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 20927264 - 20926992
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20927264 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaca 20927165  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  20927164 gttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgatgagcatttgaggattgtgttgcaagtcttgaaggagaa 20927065  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
     ||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  20927064 tcagttatgtgctaagttatctaagtgtgagttttggttgaaggaagtgattttccttggtcacgtgatttct 20926992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 41216005 - 41216288
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| |||||||||||||||||||||| ||||||||    
T  41216005 tatggaaactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggacc 41216104  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||| |||||||||| || |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  41216105 gttttatggtggtgtttattgatgatattttggtgtattcgaagtctgaggaggagcatgctgagcatttgaggattgtgttgcgagtcttgaaggagaa 41216204  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 284  Q
       ||| ||| | |||||||| ||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||| ||||    
T  41216205 ttggttatgttctaagttgtcgaagtgtgagttttggttgcgggaagtgagtttccttagtcatatgatttctaagggtagtat 41216288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20527263 - 20527148
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20527263 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggacc 20527164  T
Q  101 gttttgtggtggtgtt 116  Q
    ||||||||||||||||    
T  20527163 gttttgtggtggtgtt 20527148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 21201028 - 21201311
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| |||||||| |||||||||||||||||| | ||  ||||| ||||  ||||||| |||||||| ||||||||||||||||||||||||||| ||     
T  21201028 tatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatatatgaatagaatatttcatccttatctgtact 21201127  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | ||||||| ||  || ||||||||||| ||||||||||| ||||  ||||| ||||||| | ||||| ||||||||||||||||   |||||| || ||    
T  21201128 ggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagcatctgaggattgtgttgcataccttgaaggataa 21201227  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 284  Q
      |||||| ||| || ||||| |||||||| |||||| || |||||||||| || | ||||||||||||||| | |||||||||    
T  21201228 gaagttgtttgctaacttgtcgaagtgtgaattttggctgcaggaagtgagcttacctggtcatgtgatttcgatgggtggtat 21201311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22133905 - 22133963
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctt 59  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22133905 tatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 274
Target Start/End: Original strand, 51331744 - 51331915
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||      
T  51331744 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgcggagcatctgaagattgttttgcaagtgttgaaagagaaga 51331843  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 274  Q
    |||| | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||||    
T  51331844 agttttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttcta 51331915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 239
Target Start/End: Original strand, 21743741 - 21743939
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||| | || ||  | |||||    
T  21743741 ctaatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatcacatcttaatttattc 21743840  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     ||| |||| ||||||||||  |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||    
T  21743841 taagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgagttctggtt 21743939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 21839058 - 21838888
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  21839058 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 21838959  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  21838958 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 21838888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 19108467 - 19108306
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| || |||||||||||| | || || ||| ||||  |||| |||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  19108467 gtgtttatcgatgatattttgatttactctaagactgaaaaagaacatgctgagcatctgaagattgtcttccaagtgttgaaagagaagaaactttatg 19108368  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  19108367 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 19108306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 272
Target Start/End: Original strand, 33389280 - 33389449
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  33389280 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 33389379  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  33389380 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 33389449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 20140236 - 20140021
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| |||||| |||| || ||||| |||||||||||| | || || ||| |||| ||||| |    
T  20140236 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttttggttgttttcattgatgatattttgatttactccaagactgaagaagaac 20140137  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||| || |||| |||||| |||||||| |||||||| ||  || | | ||| || |||||||||||||| || ||||||||  ||||||| || ||    
T  20140136 atgctgatcacttgaagattgttttgcaagtgttgaaagaaaagaagctctatgctaaattgtctaagtgtgaattctggttgaaaaaagtgagctttct 20140037  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  20140036 tggccatgttatttct 20140021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 21832410 - 21832240
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  21832410 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 21832311  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  21832310 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 21832240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 239
Target Start/End: Original strand, 20834154 - 20834287
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || ||||||||| || | ||||||||| |||| ||||| ||||  || ||||||| ||||||||||||| | |||||||||||   ||    
T  20834154 gtggttgtgtttattgatgatattctgatttattcaaagactgaagaagaacatgcagaacatttgaagattgtgttgcaaattttgaaagagaaaaggt 20834253  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    ||| ||| |||||||| ||||||||||| |||||    
T  20834254 tgtatgctaagttgtcgaagtgtgagttctggtt 20834287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 21751150 - 21750878
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||   || ||||| ||||| ||  ||||||| |  || || |||||||| ||||||||| | || |||||| | | | |||| |    
T  21751150 tatggacattatgagtataaagttatgccttttggtgttactaatgctcttggagtatttatggagtacatgaatcgcatctttcatgcatttttggatc 21751051  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| ||||| || ||||| |||||||||||  | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||| ||||    
T  21751050 gtttcgtggttgttttcattgatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagttggttttgcaagtgttgaaaaagaa 21750951  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      || | | ||| || |||||||||||||| || ||||| || ||||| | ||| ||||| ||||| ||||||    
T  21750950 gaagctttatgctaaattgtctaagtgtgaattctggttaaaagaagtaatttttcttggacatgttatttct 21750878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 430370 - 430537
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  ||     
T  430370 gtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagc 430469  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||| || || ||||||||||| || ||||| || |||||||| || ||||| ||||| ||||||    
T  430470 tttatgcgaaattatctaagtgtgaattctggttaaaagaagtgagctttcttgggcatgttatttct 430537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 20855011 - 20855181
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||||||||| || ||||||||||||||| | ||||| ||  |||| || |||||||  || || |||| ||||||||||||  | ||||| ||||       
T  20855011 tttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagcatgcagaacacttgaagattgtgttgcagattttgaaggagagaa 20855110  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||| |||||||||||| ||||| ||||| ||||| |  ||||||||||| || || ||||| ||||||    
T  20855111 agttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgttatttct 20855181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 21862574 - 21862792
Alignment:
Q  53 gtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagga 152  Q
    |||| ||||||||  |||||||| | || |||||| | | | |||||||||| ||||| || || || ||||| |||||  | || || ||| |||||||    
T  21862574 gtgtgtttatggagcacatgaatcgcatttttcatgcatttttggaccgtttcgtggttgtttttattgatgacattttaatttactccaagactgagga 21862673  T
Q  153 agagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagt 252  Q
    ||| |||| ||||||||||| ||| || |||||||| || ||||||||  || | | ||| || || ||||||||||| || |||||||| || ||||||    
T  21862674 agaacatgctgagcatttgaagatggttttgcaagtgttcaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagt 21862773  T
Q  253 ttccttggtcatgtgattt 271  Q
    || ||||| ||||| ||||    
T  21862774 tttcttggacatgttattt 21862792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 31538186 - 31538408
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  31538186 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 31538285  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  31538286 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 31538385  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  31538386 aatgaagtaagttttctgggtca 31538408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 272
Target Start/End: Original strand, 41351916 - 41352082
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| |||||||| || ||||||||| | || || ||| |||| ||||| ||||  || ||| ||| |||||| || ||||| |||||||||||  |      
T  41351916 gtggttgtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaac 41352015  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | | ||| || |||||||||||||| || |||||||| ||||||||||| ||||||||||| |||||    
T  41352016 tttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggtcatgttatttc 41352082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 48425074 - 48424852
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  48425074 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 48424975  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  48424974 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 48424875  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  48424874 aatgaagtaagttttctgggtca 48424852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 52987942 - 52987720
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  52987942 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 52987843  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  52987842 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 52987743  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  52987742 aatgaagtaagttttctgggtca 52987720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 41308748 - 41308611
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| ||||||||||  |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||    
T  41308748 tattctaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaatttt 41308649  T
Q  236 ggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| |  ||||| ||||| ||||| ||| | ||||||    
T  41308648 ggttaagtgaagtaagttttcttggccatattatttct 41308611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 273
Target Start/End: Original strand, 50618646 - 50618819
Alignment:
Q  100 cgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagaga 199  Q
    ||||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || ||| |||||||| ||||||||||    
T  50618646 cgtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaaagaga 50618745  T
Q  200 accagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  |  | | ||| || || || |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  50618746 agaaactttatgctaaattatcaaagtgtgaattctggttgaaagaggtgagttttcttggacatgttatttct 50618819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 272
Target Start/End: Original strand, 16348856 - 16349016
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  16348856 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 16348955  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | || |||||||||||||| || |||||||| ||||||||||| || |||||||| |||||    
T  16348956 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggtcatgttatttc 16349016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 24792885 - 24793037
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||| ||  |  | | ||| || || |    
T  24792885 gatgatattttgatttactccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagaaaagaaactttatgctaaattat 24792984  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||||||| |||||||| ||||| ||||| ||||| ||||| ||||||    
T  24792985 ctaagtgtgagttctggttgaaagaagtaagttttcttggccatgttatttct 24793037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 273
Target Start/End: Complemental strand, 21026269 - 21026111
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  21026269 ttcatcgatgatattttaatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcta 21026170  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | |||||||||||||| |||||||| |||||||||||  |||| ||||| ||||||    
T  21026169 aaatatctaagtgtgagttctggttgaaagaagtgagtttttttggccatgttatttct 21026111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 17043275 - 17043436
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| || |||||||||||| | || || ||| || | ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  17043275 gtgtttatcgatgatattttgatttactccaagactaaagaagaacatgctgagcatatgaagattgtcttgcaagtattgaaagagaagaaactttatg 17043374  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || ||||| |||||||| || |||||||| ||||| ||||| ||||| ||||| ||||||    
T  17043375 ctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 17043436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 37679250 - 37679097
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||| |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  37679250 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 37679151  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
     |||  ||||||  ||||||  |||||| |||| ||||| |||||||| |||||    
T  37679150 caagaatgaggagaagcatgcagagcatctgagaattgtattgcaagtgttgaa 37679097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 20938347 - 20938471
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| ||||||||||  |||||| |||| || || || ||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |    
T  20938347 tattcgaagactgaagaagagcatgtagagcatctgagaatagtattacaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 20938446  T
Q  236 ggttgaaggaagtgagtttccttgg 260  Q
    |||| |  ||||| ||||| |||||    
T  20938447 ggttaattgaagtaagttttcttgg 20938471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 21234025 - 21234152
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| ||| ||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  21234025 ctgaagaagaacatgctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaaga 21234124  T
Q  246 agtgagtttccttggtcatgtgatttct 273  Q
    ||| ||||| ||||| ||||| ||||||    
T  21234125 agtaagttttcttggccatgttatttct 21234152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 24097925 - 24098014
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 263  Q
    |||||| ||| ||||||||||||| ||  |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| || |||||    
T  24097925 gattgtattgtaagtcttgaaagaaaagaagttgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttttctgggtca 24098014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 254
Target Start/End: Original strand, 19661390 - 19661538
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || ||||| || ||| | ||||||| | |||| ||||||||||   ||||| ||| |||||| ||| |||| || ||||| ||  |||    
T  19661390 gtggttgtgtttattgatgacatcttgatttattcaaggactgaagaagagcatgcatagcatctgaagattgtattgtaagtgttaaaagaaaagaagt 19661489  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    ||| ||| |||||||| ||||||||||| ||||| |  |||||||||||    
T  19661490 tgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 19661538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 22360513 - 22360665
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || |||||||| ||||| | || |||||||||||   | || ||||| || |||||||||||   | | | ||| || ||||    
T  22360513 gatgatattttgatttactccaagtctgaagaagaacctgctgagcatttgaaactggttttgcaggtgttgaaagagaagatgatttatgcgaaattgt 22360612  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||| || ||||||||||||||||| |  ||||| ||||| ||||||    
T  22360613 ctaagtgtgaattctggttgaaggaagtgagctatcttggacatgttatttct 22360665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 271
Target Start/End: Original strand, 22503552 - 22503708
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| || ||||||||  |  | | ||| |    
T  22503552 ttcatcgatgatattttgatttactccaagactgaagaagaacatgttgagcatctgaagattgtcttgcaagtgttaaaagagaagaaactttatgcta 22503651  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
    |  | |||||||||||||| |||||||| || || ||||| ||||| ||||| ||||    
T  22503652 aaatatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgtcattt 22503708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 256 - 287
Target Start/End: Original strand, 22133961 - 22133992
Alignment:
Q  256 cttggtcatgtgatttctaagggtggtatttc 287  Q
    ||||||||||||||||||||||||||||||||    
T  22133961 cttggtcatgtgatttctaagggtggtatttc 22133992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 260
Target Start/End: Complemental strand, 19856410 - 19856256
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || | ||| |||||| | ||||| ||| |||| ||||||||||  || ||| ||| ||| || |||||| | || ||||| ||  |||    
T  19856410 gtggttgtgtttattggtgacattttgatttattctaagactgaagaagagcatgaagaacatctgaagatagtattgcaaatattaaaagaaaagaagt 19856311  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    ||| ||| |||||||| ||||||||||| | ||| |  |||||||||||||||||    
T  19856310 tgtatgctaagttgtcaaagtgtgagttctagttaagtgaagtgagtttccttgg 19856256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 23196543 - 23196657
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||||||||  |||||| |||  |||||||||||||| |||||||| ||   ||||| |||||||||||| || || ||||| ||||| |  ||    
T  23196543 ctgaagaagagcatgtagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggttaagtga 23196642  T
Q  246 agtgagtttccttgg 260  Q
    ||| ||||| |||||    
T  23196643 agtaagttttcttgg 23196657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 279; Significance: 1e-156; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 42484 - 42194
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42484 tatggacactatgagtattttgtgatgccatttggagtatctaatgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 42385  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42384 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 42285  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42284 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 42194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 31797 - 32029
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  31797 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 31896  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||||||||||||||  || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  31897 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 31996  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  31997 agtgaagtgagttttcttggccatattatttct 32029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 15291235 - 15291524
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15291235 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggacc 15291334  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15291335 attttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 15291434  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 290  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15291435 ccagttgtgcgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 15291524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 285
Target Start/End: Original strand, 12340943 - 12341226
Alignment:
Q  2 atggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccg 101  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||||| ||||| ||||||| ||||||| |    
T  12340943 atggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatatatgaataggatattccatccttttctggactg 12341042  T
Q  102 ttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaac 201  Q
    |||||||||  | || || |||||||| || |||||| | ||||| ||||| ||||||| ||||||| |||||||||||||||  |||||||| || ||     
T  12341043 ttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatctgaggattgtgttgcgtgtcttgaaggaaaag 12341142  T
Q  202 cagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
     |||||| | | ||| | || || ||||||||||||||   |||||| ||||||||||||||| ||||||  ||||||||||||    
T  12341143 aagttgttttctaagctttcaaattgtgagttttggttacgggaagtaagtttccttggtcatatgattttgaagggtggtatt 12341226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 9292841 - 9292740
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  9292841 ttgaaggagaatcagttatgtgcgaagttgtctaagtgtgagttttggttgaaggaaatgactttccttggtcatgtgatttctaagggtggtatttctg 9292742  T
Q  290 tg 291  Q
    ||    
T  9292741 tg 9292740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 190 - 291
Target Start/End: Complemental strand, 14999321 - 14999220
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14999321 ttgaaggagaatcagttctgtgctaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttttg 14999222  T
Q  290 tg 291  Q
    ||    
T  14999221 tg 14999220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 14696308 - 14696035
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| ||| | ||||| |||||||| ||||| ||  | |||||||||||||| |||||||| ||||||||    || |||||| | ||| ||||      
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaactctatttttcatgcgtatttggatt 14696209  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | || ||||| |||||||| |||||||||||| | || || ||||| || ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||    
T  14696208 gcttcgtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 14696109  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 274  Q
      | || | ||| |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| |||||||    
T  14696108 gaatttatatgctaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttcta 14696035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 15323372 - 15323140
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| ||||||||||||||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||||||| |  | |||||    
T  15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattc 15323273  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| ||||||||||  |||||| |||  |||||||||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||     
T  15323272 taagagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtta 15323173  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||| ||||| ||| | ||||||    
T  15323172 agtgaagtaagttttcttggccatattatttct 15323140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 51604909 - 51605141
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  51604909 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 51605008  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| |     
T  51605009 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 51605108  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  51605109 agtgaagtgagtttccttggtcatattatttct 51605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 8708106 - 8707868
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  |||| ||||  ||||| |||||||| |||||||||||||| || ||| ||||| |||| |    
T  8708106 tatggacattacgaatattcagtgatgcctttcggtgttactaacgcgcggggtgtgtttatggagtacatgaatagaattttccatgcttatttggatc 8708007  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | |||||||| ||||| || ||||| || ||| | ||||| |||||||| ||||||||||  ||||||| ||   ||||||||||||| ||||| || ||    
T  8708006 ggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcattagaaagttgtgttgcaagtgttgaaggaaaa 8707907  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
      || ||| |||||||||||| || ||||| ||||||||    
T  8707906 gaagatgtatgccaagttgtccaaatgtgaattttggtt 8707868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 8322853 - 8323126
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||| | ||||| || ||||| |||||  |  |||||||| |||  || |||||||||||||  ||||  || |||||||| |||  ||| |    
T  8322853 tatggacactataaatattcggtaatgccgtttggtatgactaatgcgtcagacgtatttatggaatacacaaatatgatctttcatccctattcggatc 8322952  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      |||||||||||||||||||| ||||||||||||||||| ||||  ||||| |||||||  |||||| |||| ||||| ||| |  ||||||| |||||    
T  8322953 agtttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatgcagagcatctgagaattgtattggagatcttgaaggagaa 8323052  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 274  Q
      | |||| ||| |||||||| |||||||| || ||||||   |||||| |||| |||  ||||||||| ||||    
T  8323053 gaaattgtatgctaagttgtcgaagtgtgatttctggttgcgagaagtgggttttcttaatcatgtgatatcta 8323126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 14849225 - 14849455
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | | |||| || || ||||| |||||||| || ||||||||| | || || |    
T  14849225 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 14849324  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    |||| || ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  |||| | ||| || ||||| |||||||| || ||||||||    
T  14849325 agtccgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgctaaattgtcaaagtgtgaattctggttgaa 14849424  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || || ||||| ||||| || || ||||||    
T  14849425 agaggtaagttttcttggccaagttatttct 14849455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 14682651 - 14682490
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | || || ||| ||||  |||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  14682651 gtgttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 14682552  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| |||||||||||||| || |||||||| ||||||||||| ||||| ||||| ||||||    
T  14682551 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttcttggccatgttatttct 14682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 40475178 - 40474963
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| || |||||| | || |||||| | | | |||| || |||||||| |||||||| |||||||||||| | || || ||| |||| ||||| |    
T  40475178 tttatggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgttcatcgatgatattttgatttactccaagactgaagaagaac 40475079  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || ||||| |||||||| || |||||||| ||||||||||| ||    
T  40475078 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagtgagttttct 40474979  T
Q  258 tggtcatgtgatttct 273  Q
     || ||||| ||||||    
T  40474978 aggccatgttatttct 40474963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 8051542 - 8051712
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  8051542 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 8051641  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | |||||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8051642 aactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8051712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Original strand, 14301898 - 14302068
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  14301898 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 14301997  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  14301998 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 14302068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 15072514 - 15072292
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| |||||||||||| | || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  15072514 ctaatgcgcctggtgtgtttatggagtacatgaatagagttttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 15072415  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||  |||||||||  |||||| ||| ||||||||||||||| |||||||| ||   ||||| |||||||||||| || ||||| || |||||     
T  15072414 taagaatgaataagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgtgaattctggtta 15072315  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    |  ||||| ||||| ||||||||    
T  15072314 agtgaagtaagttttcttggtca 15072292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 23957840 - 23957670
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  23957840 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 23957741  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  23957740 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 23957670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 232
Target Start/End: Original strand, 15001482 - 15001673
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| | ||| |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  15001482 ctaatgcgcctgttgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 15001581  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagt 232  Q
     |||  ||| ||||||||||  || ||| ||||||||||||||||||| |||||||| ||  |||||| ||||||||||| ||| |||||||    
T  15001582 taagattgaagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtttaaatgtgagt 15001673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 27713429 - 27713259
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  27713429 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 27713330  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || | |||||| ||||||||||| || || ||||| ||||||    
T  27713329 agctttatgctaaattgtctaagtgtgaattctagttgaaagaagtgagttttctaggccatgttatttct 27713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 3262911 - 3263133
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  3262911 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 3263010  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  3263011 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 3263110  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  3263111 aatgaagtaagttttctgggtca 3263133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 12478684 - 12478523
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| | || ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  12478684 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatg 12478585  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  12478584 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 12478523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 19776721 - 19776882
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| | || ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  19776721 gtgttcatcgacgatattttgatttactccaagaccgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatg 19776820  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  19776821 ccaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 19776882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 44659983 - 44660175
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| |||||||| ||||||||| |||| || ||| ||| ||||||    ||||| |||||||| || || ||||||||  | |||||    
T  44659983 ctaacgcgcctggtgtatttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgacgatattttaatctattc 44660082  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 233  Q
     |||  |||||| |||||||  |||||| |||| |||||||||||||| ||||| || ||   ||||| ||| |||||||| || ||||||||    
T  44660083 caagaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagtt 44660175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 8388462 - 8388336
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||| || |||||||||||||| || |||||||| ||    
T  8388462 ctgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatga 8388363  T
Q  246 agtgagtttccttggtcatgtgatttc 272  Q
     |||||||||||||| ||||| |||||    
T  8388362 ggtgagtttccttggccatgttatttc 8388336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 1647394 - 1647626
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||||| || || ||| ||| ||||||    || |||||||| ||||| |||||||||||| | |||||    
T  1647394 ctaatgcgcctggtgtgtttatggagtatatgaataggattttccatgcttttctggataaattcgtggtggtattcattgatgatattttgatttattc 1647493  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| || |||||||  || ||  ||| |||||||||||   |  ||||||| |   |||||| ||| |||||||| ||||| ||||| |||||     
T  1647494 taagactgaagaggagcatgcagaacacctgaagattgtgttgcggattctgaaagaaagaaagttgtatgctaagttgtcgaagtgcgagttctggtta 1647593  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  |||||||||||  |||| || |||||||||    
T  1647594 agtgaagtgagttttgttggccacgtgatttct 1647626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18547696 - 18547832
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| || ||||||||||| |||| ||| || ||| | ||||| |||||||| || |||||||| || ||||| ||||| || ||||| ||| | || |    
T  18547696 tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc 18547795  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgta 137  Q
      ||||| ||||| ||||| |||||||||||||||||    
T  18547796 agtttgttgtggtattcattgatgatattttggtgta 18547832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 15145759 - 15145974
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || || ||| |||| ||||| |    
T  15145759 tttatggagtacatgaatcgtatctttcatgcatttttggatcgattcgtggttgtctttatcgatgatattttgatttactccaagactgaagaagaac 15145858  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||| |||  ||||| |||||||| ||||||||||   |  | | ||| || || |||||||||||||| |||||||| || || ||||| ||    
T  15145859 atgctgagcatctgaacattgtcttgcaagtgttgaaagagaggaaactttatgctaaattatctaagtgtgagttctggttgaaagaggtaagttttct 15145958  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  15145959 tggccatgttatttct 15145974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 16149804 - 16149668
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || |||||| || | ||||||| | |||| ||||||||||  || ||| ||| |||||| |||||| | |||||||| ||      
T  16149804 tttgtggttgtgtttattgacgatattctgatttattcaatgactgaagaagagcatgcagaacatctgaagattgtattgcaaatattgaaagaaaaga 16149705  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    |||||| ||| ||||| || ||||||||||| |||||    
T  16149704 agttgtatgctaagttatcgaagtgtgagttctggtt 16149668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 16153950 - 16153814
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || |||||| || | ||||||| | |||| ||||||||||  || ||| ||| |||||| |||||| | |||||||| ||      
T  16153950 tttgtggttgtgtttattgacgatattctgatttattcaatgactgaagaagagcatgcagaacatctgaagattgtattgcaaatattgaaagaaaaga 16153851  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    |||||| ||| ||||| || ||||||||||| |||||    
T  16153850 agttgtatgctaagttatcgaagtgtgagttctggtt 16153814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 254
Target Start/End: Complemental strand, 27902476 - 27902328
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    |||||||| || || ||| |||||||| | ||||| ||| |||| || |||||||  || ||  ||| ||||||||||||  | ||||||||||   |||    
T  27902476 gtggtggtatttattgatcatattttgatttattctaagactgaagaggagcatgcagaacacatgaagattgtgttgcagattttgaaagagagaaagt 27902377  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    ||| |||||||||||| ||||| ||||| | ||| || |||||||||||    
T  27902376 tgtatgccaagttgtcgaagtgcgagttctagttaaatgaagtgagttt 27902328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 29451654 - 29451886
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| ||||| || || |||||||||||  | |||||    
T  29451654 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtatttattgatgatattttaatctattc 29451753  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  || ||| |||| ||||| |||||||| ||||| || ||    |||| ||| |||||||| || |||||||| |||||     
T  29451754 caagaatgaggaggagcatgcagatcatctgagaattgtattgcaagtgttgaaggaaaagagattgtatgcaaagttgtcgaaatgtgagttctggtta 29451853  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  |||||||| || || |||||| | ||||||    
T  29451854 agtgaagtgagctttctgggtcatattatttct 29451886  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 15357332 - 15357435
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| ||||||||||  || ||| ||| |||||| || ||||| |||||||| ||  |||||| |||||||||||| || |||||||| |    
T  15357332 tattctaagactgaagaagagcatgcagaacatctgaagattgtattacaagtattgaaagaaaagaagttgtatgccaagttgtcgaaatgtgagttct 15357431  T
Q  236 ggtt 239  Q
    ||||    
T  15357432 ggtt 15357435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 17093068 - 17093165
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||    
T  17093068 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaa 17093165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 16234920 - 16235008
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||    
T  16234920 gtgttcatcgacgatattttgatttactccaagactgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaa 16235008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 29037437 - 29037493
Alignment:
Q  217 ttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  29037437 ttgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 29037493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 24829805 - 24830094
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24829805 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 24829904  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  24829905 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgcggagcatttgaggattgtgttgcaattcttgaaagagaa 24830004  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 290  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24830005 ccagttgtgtgccaagttgtctaagtgtgagttttggttcaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgt 24830094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 22279931 - 22279641
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  22279931 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggacc 22279832  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| || ||  |||| ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  22279831 gttttgtggtggtgttcatagatgatattttggtgtattcgaaatcgaaggaggagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaa 22279732  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22279731 ccagttatgtgcaaagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagtgtggtatttctgtg 22279641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 24568285 - 24568575
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  24568285 tatggacactatgagtattctgtgatgccatttggagtatctaatgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggacc 24568384  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||| |||| |||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  24568385 gttttgtggtgttgtttatagattatattttggtgtattcgaagtctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaa 24568484  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24568485 ccagttatgtgctaagttgtctaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtg 24568575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 22760186 - 22760472
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||| || ||||||||||||||||||||||| |||||||    
T  22760186 tatggacactatgagtattctgtgatgccatttggagtatccgatgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggacc 22760285  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||  || |||||||| ||||||| | ||||| ||||||||||||||||||| ||| | |||||    
T  22760286 gttttgtggtggtgtttatagatgatattttggtgtatttgaaatctgaggaggagcatgctaagcatctgaggattgtgttgcaagttttggaggagaa 22760385  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 287  Q
    |||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||    
T  22760386 ccagttatgtgctaagttgtctaagtgtaagttttggttgcaggaagtgagtttccttggtcatgtgatttttaagggtgatatttc 22760472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 25130435 - 25130152
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||||||||  |||||||    
T  25130435 tatggacactatgagtattctatgatgccatttggagtatccaatgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggacc 25130336  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | |||||||||||||| ||| ||||||||||||| ||| | ||||||||||| ||||||| ||||||||||||| ||||||||| |||||| || |||||    
T  25130335 gctttgtggtggtgtttatatatgatattttggtatatacgaagtctgaggaggagcatgctgagcatttgagggttgtgttgcgagtcttaaaggagaa 25130236  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 284  Q
     | ||| ||||| |||||||  ||||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||    
T  25130235 tcggttatgtgctaagttgttgaagtgtgagttttggttgcggaaagtgagtttctttggtcatgtgatttctaagggtggtat 25130152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 10037949 - 10038217
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||| |||| |    
T  10037949 tatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatccttatttggatc 10038048  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      ||| |||||||||| ||||| ||||| ||| ||||||| ||||| ||||| |||||||  |||||| | ||||||||||||||    |||||||||||    
T  10038049 agtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgcatactttgaaagagaa 10038148  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgat 269  Q
      |||||| ||  |||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||    
T  10038149 taagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 10038217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 10098334 - 10098602
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||| |||| |    
T  10098334 tatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatccttatttggatc 10098433  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      ||| |||||||||| ||||| ||||| ||| ||||||| ||||| ||||| |||||||  |||||| | ||||||||||||||    |||||||||||    
T  10098434 agtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcggagcatctaaggattgtgttgcatactttgaaagagaa 10098533  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgat 269  Q
      |||||| ||  |||||||  ||||||||||||| ||||  |||||||||||||||||||||||||||    
T  10098534 taagttgtttgataagttgttaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 12639039 - 12639140
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12639039 ttgaaagagaatcagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 12639138  T
Q  290 tg 291  Q
    ||    
T  12639139 tg 12639140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 30010816 - 30011073
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 115  Q
    |||||||||||||| ||  | ||  ||||||||||||| || |||||| |||| |||||| | || |||||| |||||||||| |||||||| || ||||    
T  30010816 tattctgtgatgcctttcagtgttactaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgt 30010915  T
Q  116 tcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 215  Q
    | ||||||||||||||| | || || ||||| ||||| || ||||  ||||||||||| ||||| ||||||||  || |||||||  |||| | ||||||    
T  30010916 ttatagatgatattttgatatactccaagtccgaggaggaacatgtcgagcatttgagaattgttttgcaagtgctgcaagagaagaagttatatgccaa 30011015  T
Q  216 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| || | ||| || || |||||||| ||||||||||| || |||||| | ||||||    
T  30011016 gttatcgatgtgcgaattctggttgaacgaagtgagttttctcggtcatattatttct 30011073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 274
Target Start/End: Complemental strand, 23112522 - 23112289
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    ||||||||||  |||| |||||||| |||||||||||||| || ||| |||||||||| |  ||||| || ||||| || |||||||| ||| | |||||    
T  23112522 ctaatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattc 23112423  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  |||||||| | ||||||||||||||| ||||| || ||  |||||| |||||||||||| || ||||| || |||||     
T  23112422 taagactgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaaggaaaagaagttgtatgccaagttgtccaaatgtgaattctggtta 23112323  T
Q  241 aaggaagtgagtttccttggtcatgtgatttcta 274  Q
    |  ||||| ||||| ||||| ||| | |||||||    
T  23112322 agtgaagtaagttttcttggccatattatttcta 23112289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 21143769 - 21143930
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  21143769 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 21143868  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  21143869 ccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 21143930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 24818847 - 24819119
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||| ||| ||||| | || |||||| | ||| | || |    
T  24818847 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 24818946  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| |||| |||||||||||||||||| ||||||||  |||| |||||    
T  24818947 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 24819046  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      || | | ||| |||||||| ||||||||  | |||||||| ||||| ||||| ||||| ||||| ||||||    
T  24819047 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttatttct 24819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 27789526 - 27789294
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| ||||||    || |||||||| || || ||||||||| || | |||||    
T  27789526 ctaacgcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattc 27789427  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||| ||||||| |||||||||||  |||||| |||||| ||||| || |||||||||||| |     
T  27789426 gaagactgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggcta 27789327  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  27789326 agtgaagtgagtttccttggtcatattatttct 27789294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 24875481 - 24875639
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  24875481 ttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 24875580  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||    
T  24875581 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttct 24875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 30209549 - 30209787
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 115  Q
    |||| ||||||||| || || ||  |||||||||  || || ||||||||||| ||||||   || |||||| |||||||||| |||||||| || ||||    
T  30209549 tattttgtgatgcctttcggtgttactaatgcgctgggagtgtttatggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgt 30209648  T
Q  116 tcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 215  Q
    | ||||||||||||||| | || || ||||| ||||| || ||||  || |||||||| ||||| || |||||  ||||||||||  |||| | ||||||    
T  30209649 ttatagatgatattttgatatactccaagtccgaggaggaacatgtcgaacatttgagaattgtttttcaagtgctgaaagagaagaagttatctgccaa 30209748  T
Q  216 gttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    ||| || ||||| || || |||||||| |||||||||||    
T  30209749 gttatcgaagtgcgaattctggttgaacgaagtgagttt 30209787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 23098675 - 23098888
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||||| || |||||| ||| ||||||  | || ||||||||||| || |||||||||||  | |||||    
T  23098675 ctaatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattc 23098774  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  |||||| |||||||||| || || ||  ||||||||||   ||||| ||| |||||||| || ||||| || |||||     
T  23098775 taagactgaagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaatgttgtatgctaagttgtcgaaatgtgaattctggtta 23098874  T
Q  241 aaggaagtgagttt 254  Q
    |  |||||||||||    
T  23098875 agtgaagtgagttt 23098888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 27373038 - 27372823
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    ||||||||||| |||||| | || || ||| | | | |||| || |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |    
T  27373038 tttatggaatatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaac 27372939  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| ||||||||||| ||    
T  27372938 atgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttct 27372839  T
Q  258 tggtcatgtgatttct 273  Q
     || ||||| ||||||    
T  27372838 aggccatgttatttct 27372823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 274
Target Start/End: Original strand, 41607104 - 41607275
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  41607104 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 41607203  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttcta 274  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||||    
T  41607204 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttcta 41607275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 24711758 - 24711588
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  24711758 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 24711659  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  24711658 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 24711588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 254
Target Start/End: Complemental strand, 23295659 - 23295508
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||| ||  || | ||||||||| |||| ||||||||||  || ||| ||| ||||||||| ||||| |||||||||||      
T  23295659 tttgtggttgtgtttattgatgacatcctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaa 23295560  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  |||||||||||    
T  23295559 agttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttt 23295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 24950296 - 24950165
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    ||||||||| || | ||||||||| |||| ||||||||||  || ||| ||| ||||||||||||| | |||||||||||  |||||| ||| |||||||    
T  24950296 gatgatattctgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgt 24950197  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagt 252  Q
    | ||||||||||| ||||| |  |||||||||    
T  24950196 cgaagtgtgagttatggttaagtgaagtgagt 24950165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 24264094 - 24263924
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| || || |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  24264094 tttgtggttgtgtttatcgacgatattttgatttactccaagactgaagaggaacatgttgagcatctgaagattgttttgcaagtgttgaaagagaaga 24263995  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  24263994 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 24263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 254
Target Start/End: Complemental strand, 23278562 - 23278349
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||||||||   ||| ||||| || || || ||||| ||| || | |||||    
T  23278562 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattc 23278463  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| ||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||| ||||| |||||     
T  23278462 taagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctggtta 23278363  T
Q  241 aaggaagtgagttt 254  Q
    |  |||||||||||    
T  23278362 agtgaagtgagttt 23278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 272
Target Start/End: Complemental strand, 27219740 - 27219571
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||      
T  27219740 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 27219641  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    || | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  27219640 agctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 27219571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 272
Target Start/End: Complemental strand, 16927063 - 16926915
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  16927063 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 16926964  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    ||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  16926963 agtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 16926915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 272
Target Start/End: Complemental strand, 17000703 - 17000555
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  17000703 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 17000604  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    ||||||| || |||||||| || |||||||||||||| ||||| |||||    
T  17000603 agtgtgaattctggttgaaagaggtgagtttccttggccatgttatttc 17000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 23106450 - 23106617
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  ||     
T  23106450 gtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagc 23106549  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||| || ||||||||||| || || ||||| || |||||||| || ||||| ||||| ||||||    
T  23106550 tttatgcgaaattgtctaagtgcgaattatggttaaaagaagtgagctttcttggacatgttatttct 23106617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Complemental strand, 1065537 - 1065315
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||| |||| || ||| ||| ||||||    ||||||||||| || || |||||||||||  | |||||    
T  1065537 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgtggtggtatttattgatgatattttaatctattc 1065438  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| || ||||||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| || ||     
T  1065437 caagaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctgatta 1065338  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  1065337 aatgaagtaagttttctgggtca 1065315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 273
Target Start/End: Complemental strand, 9485919 - 9485770
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  || | | ||| || |||||||    
T  9485919 gatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtcta 9485820  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  9485819 agtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 9485770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 272
Target Start/End: Complemental strand, 10870574 - 10870405
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||      
T  10870574 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaaga 10870475  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  10870474 aactttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 10870405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 12576139 - 12575907
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||| |||| |||||| ||| | ||||    || |||||||| || || ||||| ||| || | |||||    
T  12576139 ctaacgcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattc 12576040  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  || ||| |||| |||||||||||||| |||||||| |   |||||| ||||||  |||| || ||||| |||||| |     
T  12576039 gaagactgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgaattttggcta 12575940  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||||||||||||| | ||||||    
T  12575939 agtgaagtgagtttccttggtcatattatttct 12575907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 22734511 - 22734663
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||  | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  22734511 gatgatattttaatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 22734610  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||| | || |||||||| |||||||| || ||||| ||||| ||||||    
T  22734611 ctaagtgtaaattctggttgaaagaagtgagctttcttggacatgttatttct 22734663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 254
Target Start/End: Original strand, 27208894 - 27209042
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||||||||| ||||||||||||||| | ||||| ||| |||| || | |||||  |||||  ||| ||||||||||||  | ||||||||||   |||    
T  27208894 gtggtggtgtttatagatgatattttgatttattctaagactgaagaggtgcatgcagagcacctgaagattgtgttgcagattttgaaagagagaaagt 27208993  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    ||| |||||| ||||| ||||| ||||| ||||| |  |||||||||||    
T  27208994 tgtatgccaacttgtcgaagtgcgagttctggttaagtgaagtgagttt 27209042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 272
Target Start/End: Original strand, 44384298 - 44384458
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  44384298 gtgttcatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 44384397  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | || |||||||||||||| || |||||||| ||||||||||| || || ||||| |||||    
T  44384398 ctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttc 44384458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 24706213 - 24706371
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  24706213 ttcattgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcta 24706312  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || ||||| |||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  24706313 aattatctaaatgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 24706371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 45534604 - 45534494
Alignment:
Q  163 gagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtc 262  Q
    ||||||||||| ||||| ||||||||  ||||||||||  |||| | ||||||||| || ||||| || || |||||||| ||||||||||| || ||||    
T  45534604 gagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttctcggtc 45534505  T
Q  263 atgtgatttct 273  Q
    || | ||||||    
T  45534504 atattatttct 45534494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 23189633 - 23189473
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| ||||| ||||||||| | || || ||| |||||||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||    
T  23189633 gtgtttatagacgatattttgatttactccaagactgaggaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatg 23189534  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||||| || ||||||||| |||| ||||| || || ||||| ||||||    
T  23189533 ctaaattgtctaagtgtga-ttctggttgaagaaagtaagttttctgggccatgttatttct 23189473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 254
Target Start/End: Original strand, 22323618 - 22323726
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| ||||  |||||| ||| |||||| |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| ||    
T  22323618 ctgaagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaaga 22323717  T
Q  246 agtgagttt 254  Q
    |||||||||    
T  22323718 agtgagttt 22323726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 25264745 - 25264621
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |    
T  25264745 tattctaagactgaagaagagcatgcagaacatctgaagattgtcttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttct 25264646  T
Q  236 ggttgaaggaagtgagtttccttgg 260  Q
    |||| |  ||||| ||||| |||||    
T  25264645 ggttaagtgaagtaagttttcttgg 25264621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 273
Target Start/End: Complemental strand, 23073589 - 23073417
Alignment:
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| ||||| || ||||| |||||||||||| | || || |||||||| ||||| |||  |   ||||||| | | || || ||||| |||||||||||    
T  23073589 gtttcgtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatactagccatttgaagttggttttccaagtgttgaaagagaa 23073490  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      || | | ||| || |||||||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  23073489 gaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 23073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 9337306 - 9337209
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||    
T  9337306 tttgtggttgtgtttatcgacgatattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaa 9337209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 261; Significance: 1e-145; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 5886 - 6178
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaa-tacatgaata-gaatatttcatccttatctgga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  5886 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctgga 5985  T
Q  99 ccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagag 198  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5986 ccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagag 6085  T
Q  199 aaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6086 aaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttttgtg 6178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 14281 - 14167
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||||||||  |||||| ||| ||||||||||||| | |||||||| ||  |||||| ||| |||||||| ||||||||||| ||||| |  ||    
T  14281 ctgaagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattga 14182  T
Q  246 agtgagtttccttgg 260  Q
    ||||||||| |||||    
T  14181 agtgagttttcttgg 14167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 255; Significance: 1e-142; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 7379 - 7089
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7379 tatggacactatgagtattctgtgatgtcatttggagtatctaatgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggacc 7280  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7279 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 7180  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7179 ccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatttgatttctaagggtggtatttatgtg 7089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 437 - 147
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  437 tatggacactatgagtattctgtgatgtcatttggagtatctaatgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggacc 338  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  337 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaa 238  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  237 ccagttatgtgctaagttttctaagtgtgagttttggttgaaggaagtgagtttccttggtcatttgatttctaagggtggtatttatgtg 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 251; Significance: 1e-139; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 26346 - 26636
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||    
T  26346 tatggacactatgagtattttgtgatgccatttggagtatctaatgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggacc 26445  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  26446 gttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaacatttgaggattgtgttgcaagtcttgaaagagaa 26545  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26546 ccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggcatttctgtg 26636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 25270 - 25315
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  25270 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagtttt 25315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 224
Target Start/End: Original strand, 19819 - 19937
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || ||||| || ||| | ||||| |||  ||| ||||||||||  || ||| ||| |||||| |||||||| || ||||||||  |||    
T  19819 gtggttgtgtttattgatgacatcttgatttattctaagaatgaagaagagcatgcagaacatctgaagattgtattgcaagtattcaaagagaataagt 19918  T
Q  206 tgtgtgccaagttgtctaa 224  Q
    ||| |||||||||||||||    
T  19919 tgtatgccaagttgtctaa 19937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 34311 - 34021
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  34311 tatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggacc 34212  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34211 gttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaa 34112  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34111 ccagttatgtgcaaagttgtctaagtgtgaattttggttggaggaagtaagtttccttggtcatgtgatttctaagggtggtatttctgtg 34021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 247; Significance: 1e-137; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 8906 - 9196
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  8906 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatc 9005  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  9006 gttttgtgatggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagtattgaaagagaa 9105  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    | |||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9106 ctagttatgtgttaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 9196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 273
Target Start/End: Complemental strand, 55882 - 55709
Alignment:
Q  100 cgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagaga 199  Q
    ||||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || ||| |||||||| ||||||||||    
T  55882 cgtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgttgagcatttgaagactgttttgcaagtgttgaaagaga 55783  T
Q  200 accagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  |  | | ||| || || || |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  55782 agaaactttatgctaaattatcaaagtgtgaattctggttgaaagaggtgagttttcttggacatgttatttct 55709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 40858 - 40588
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || |||||||| ||||||||| | || |||||| | | | |||| |    
T  40858 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatttttcatgcatttttggatc 40759  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| |||||  | ||||| ||||| |||||  | || || ||| | |||||||| |||| ||||||||||| || ||| |||||||| |||||||||||    
T  40758 gtttcgtggtttttttcattgatgacattttaatttactccaagaccgaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaa 40659  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
      |  | | ||| || || ||||||||||| || |||||||| || |||||||| ||||| ||||| ||||    
T  40658 gaaactttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttattt 40588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 74578 - 74308
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || || || |||||||| ||||||||| | || |||||| | | | |||| |    
T  74578 tatggacattatgagtataaagtgatgcctttcggtgttacaaatgcacctggagtatttatggagtacatgaatcgcatttttcatgcatttttggatc 74479  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| |||||  | ||||| ||||| |||||  | || || ||| | |||||||| |||| ||||||||||| || ||| |||||||| |||||||||||    
T  74478 gtttcgtggtttttttcattgatgacattttaatttactccaagaccgaggaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaa 74379  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
      |  | | ||| || || ||||||||||| || |||||||| || |||||||| ||||| ||||| ||||    
T  74378 gaaactttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttattt 74308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 239; Significance: 1e-132; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 5 - 291
Target Start/End: Original strand, 2036 - 2322
Alignment:
Q  5 gacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  2036 gacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattt 2135  T
Q  105 tgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccag 204  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  2136 tgtggtggtgttaatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgaggattatgttgcaggtcttgaaagagaaccag 2235  T
Q  205 ttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    || ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  2236 ttatgtgctaagttgtctaagtgtgagttttggttggaggaagtgagtttccttggtcatgtgatttataagggtggtatttatgtg 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 26553 - 26270
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  26553 tatggacactatgagtattctgtgatgtcatttagagtatctaatgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggacc 26454  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||| |||| ||  |||| |||||||||||||| |||   |||||  |||||| |||||| ||||| |||||||||   ||||||||||| ||    
T  26453 gttttgtggtgatgtttatttatgacattttggtgtattcgaagatcgaggagtagcatgttgagca-ttgagaattgtgttgggtgtcttgaaagaaaa 26355  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatt 285  Q
      ||||||  || ||||| || ||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||    
T  26354 gaagttgttagctaagttttcgaagtgtgagttttggttgcgggaagtgactttccttggtcatgtgatttcgaaaggtggtatt 26270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 235; Significance: 1e-130; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 7941 - 8231
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7941 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 8040  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||| |||||||||| |||||||||||||| |||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  8041 gttttttggtggtgtttatagatgatattttagtgtattcgaagtcggaggaagagcatgttgagcatctgaggattgtgttgcaagttttgaaagagaa 8140  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  8141 ccagttatgtgctaagttgtctaagtgtgtgttttggttgaaggaagtgagtttccttggtcatgtgatttctaatggtggtattgctgtg 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 16298 - 16079
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  16298 ctaatgcgcctggtgtgtttatggagtatatgaacggaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 16199  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     | | |||| ||||||||||  |||||| ||| |||||| |||||||| ||||| || ||   ||||| |||||||||||| || ||||| ||||||||     
T  16198 tacgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaggaaaagaggttgtatgccaagttgtcaaaatgtgaattttggtta 16099  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  16098 agtgaagtaagttttcttgg 16079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 235; Significance: 1e-130; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 132569 - 132859
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||     
T  132569 tatggacactatgagtactctgtgatgccatttggagtatctaatgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggact 132668  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||| || |||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  132669 gttttgtggtggtctttatagatgatattttagtgtattcgaagtttgaggaagagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaa 132768  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  132769 ccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctatgggtggtatttctgtg 132859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 25942 - 25762
Alignment:
Q  111 ggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgt 210  Q
    |||||||||||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||  ||||| ||||||||| | |||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaagatttgaaggagaaccagctatgt 25843  T
Q  211 gccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    || |||||  |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  25842 gctaagtttcctaagtgtgagttttggttgcaggaagtaagtttcattggtcatgtgatttctaagggtggtatttatgtg 25762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25993 - 25938
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgt 56  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  25993 tatggacactatgagtattctgtgatgccatttagagtatgcaatgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 85451 - 85581
Alignment:
Q  142 aagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttga 241  Q
    |||||||| ||||| |||| ||||||||||| | |||| |||||||| |||||||||||  || | | ||| || ||||||||||| || || |||||||    
T  85451 aagtctgaagaagaacatgctgagcatttgaagcttgttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattctggttga 85550  T
Q  242 aggaagtgagtttccttggtcatgtgatttc 272  Q
    | |||||||| || ||||| ||||| |||||    
T  85551 aagaagtgagctttcttggacatgttatttc 85581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 223; Significance: 1e-123; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 24402 - 24112
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||| || |||||||||||||||||||||||||||||||    
T  24402 tatggacactatgagtatgctgtgatgccatttggagtatcgaatgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggacc 24303  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||| ||||||||||||||||||||||||||| ||||| | |||    
T  24302 gttttgtggtggtgttcatagatgatattttggtatattcgaaatctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaggggaa 24203  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24202 ccagttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 24112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 8189 - 7974
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| ||||||||||| || ||||| |||||||||||| | || || | |||||| ||||| |    
T  8189 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccatgtctgaagaagaac 8090  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| | ||||||||| | | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| |||||||| || ||    
T  8089 atgctaagcatttgaagctagttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 7990  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  7989 tggacatgttatttct 7974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 7009 - 7299
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || || ||||||| |||||||||||||||||||||||    
T  7009 tatggacactatgagtattctgtgatgccatttggagtatccaatgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggacc 7108  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||| |||||||||| ||| ||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  7109 gttttatggtggtgtttataaatgatattttggtgtatttgaagtctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaa 7208  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7209 ccagttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgagtttccttggtcatatgatttctaagggtggtatttctgtg 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 16284 - 15998
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  16284 tatggacactatgagtattctgtgatgccattttgagtatccaatgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggacc 16185  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  16184 gttttgtggtgatgtttatagatgatattttggtgtattcgaagtctgaggaggagcatgttgagcatttgaggattgtgttgcaagtcttgaaggagaa 16085  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 287  Q
    |||||| ||||| ||||||| || |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  16084 ccagttatgtgctaagttgtttacgtgtgaattttggttgcaggaagtgagtttccctggtcatgtgatttctaagggtggtatttc 15998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 209; Significance: 1e-114; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 3 - 291
Target Start/End: Complemental strand, 7438 - 7150
Alignment:
Q  3 tggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgt 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||||| ||||||||||||||||||||| ||||| || |||||||| ||||||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagtcttaaaagagaacc 7239  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  7238 agttatgtgctaagttgtctaagtgtgagttttggttgcaggaagtgagtttcctgggtcatgtgatttctaagggtggtatttatgtg 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 31503 - 31788
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||| |||||||||||||  |||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||     
T  31503 tatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggact 31602  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||| || ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||  ||| | ||||||| |||||    
T  31603 gttttgtggtggtttttatagatgatattttggtgtattcgaagtttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaa 31701  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 287  Q
    |||||| ||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  31702 ccagttatgtgctaagttgtcgaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 31788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 21927 - 22165
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||| |||||||||||||  |||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||     
T  21927 tatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggact 22026  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||||||||||| || ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||  ||| | ||||||| |||||    
T  22027 gttttgtggtggtttttatagatgatattttggtgtattcgaagtttgaggaagagcatgctgagcatttgaggattgt-atgcgaatcttgaacgagaa 22125  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    |||||| ||||| |||||||| ||||||||||||||||||    
T  22126 ccagttatgtgctaagttgtcgaagtgtgagttttggttg 22165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 207; Significance: 1e-113; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 1026 - 1316
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  1026 tatggacactatgagtattctgtgatgccatttgcagtatccaatgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggacc 1125  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    ||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  1126 gttttatggtggtgtttatagatgatattttggtgtattcgaagtctgaggaggagcatgctgagcatttgaggattgtgttgcaagtcttgaaggagaa 1225  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||| || ||||| || ||||| ||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  1226 ccaattatgtgctaaattgtcgaagtgtgagttttagttgcagaaagtgagtttcctttgtcatgtgatttctaagggtggtatttttgtg 1316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 4571 - 4475
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtattt 286  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  4571 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtgttattt 4475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 1964 - 2245
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||||     
T  1964 tatggacactatgagtattcggtgatgccatttggagtatctaatgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggact 2063  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||          ||||||||||||||||||||||||||||||||||||||    
T  2064 gttttgtggtggtgttcatagatgatattttggtgtattcgaaatctgagga---------cgagcatttgaggattgtgttgcaagtcttgaaagagaa 2154  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    |||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2155 ccagttatgtgcaaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 883 - 1168
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||| ||||||    
T  883 tatgaacactatgagtattctgtgatgccatttggagtatccaatgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggacc 982  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
     ||||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  983 attttgtggtggtgtttatagatgatattt-ggtgtattcgaagtctgaggaggagcatgctgagcatttgaggattgtgttgcaagttttgaaagagaa 1081  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttc 287  Q
    |||||| ||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||    
T  1082 ccagttatgtgctaagttgtcgaagtgtgaattttggttgcaggaagtgagtttccttggtcacgtgatttcgaagggaggtatttc 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 7085 - 7361
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||    
T  7085 tatggacactatgggtattctgtgatgccatttggagtatccaatgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggacc 7184  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||| |||||||||     ||||| | | ||||||||| |||||    
T  7185 gttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgaggaggagcatgctgagcattt----tttgtgctacgagtcttgaaggagaa 7280  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtgg 281  Q
     ||||| ||||  ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  7281 tcagttatgtgttaagttgtctaagtttgagttttggttataggaagtgagtttccttggtcatgtgatttcgaagggtgg 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 333 - 103
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||||||||||||| ||     
T  333 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttcatagagtatatgaatagaatatttcatccttatctgtact 234  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||||||| |||||||||||||||| |||||  || |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  233 gttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaagagcatgctgagcatttgaggattatgttgcaagtcttgaaggagaa 134  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgag 231  Q
    | |||| ||||| ||||||||||||||||||    
T  133 ctagttatgtgctaagttgtctaagtgtgag 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1701 - 1888
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||| ||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1701 tatggaaactatgagtattccgtaatgccatttggagtttccaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 1800  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagt 188  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  1801 gttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggattgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 104; Significance: 7e-52; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 25024 - 25147
Alignment:
Q  168 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 267  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25024 tttgaggattgtgttgcaagtcttgaaggagaaccagttatgtgcaaagttatctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtg 25123  T
Q  268 atttctaagggtggtatttctgtg 291  Q
    ||||||||||||||||||||||||    
T  25124 atttctaagggtggtatttctgtg 25147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 19425 - 19319
Alignment:
Q  154 gagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 253  Q
    |||||||  |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || ||||| |  ||||| ||||    
T  19425 gagcatgcagagcatctgaagattgtattgcaagtgttgaaagataagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaagtaagtt 19326  T
Q  254 tccttgg 260  Q
    | |||||    
T  19325 ttcttgg 19319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 9121 - 8853
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| |||||||| || | ||||||| ||||||| ||  |||||||||  |||||||| |||||||||||||||||||| || ||||||||| |||| |    
T  9121 tatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaatagaatcttccatccttatttggatc 9022  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      ||| |||||||||| ||||| ||||| ||| ||||||| ||||| ||||| |||||||  |||||| | ||||||||||||||    |||||||||||    
T  9021 agtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattgtgttgcatactttgaaagagaa 8922  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgat 269  Q
      |||||| ||  |||||||| ||||||||||||| ||||  |||||||||||||||||||||||||||    
T  8921 taagttgtttgataagttgtcaaagtgtgagttttagttgcgggaagtgagtttccttggtcatgtgat 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 2323 - 2200
Alignment:
Q  168 tttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtg 267  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  2323 tttgaggattgtgttgcaagccttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttggttgaaggaagtgagttttcttggtcatgtt 2224  T
Q  268 atttctaagggtggtatttctgtg 291  Q
    ||||||||||||||||||||||||    
T  2223 atttctaagggtggtatttctgtg 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 9114 - 9386
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| ||||| ||||| |||||||| || || ||  | |||||||||||||| |||||||| ||||||||| | || |||||| | ||| | || |    
T  9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc 9213  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| ||||| |||||||| |||||||||||| | || || |||||||| ||||| |||| |||||||||||||||||| ||||||||  |||| |||||    
T  9214 gtttcgtggttgtgttcatggatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaggattgttttgcaagtgctgaaggagaa 9313  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      |||| | ||||||| |||| |||||||| || |||||| | || |||||||| ||||| ||||| ||||||    
T  9314 gaagttatatgccaagctgtcaaagtgtgaattctggttggatgaggtgagttttcttggccatgttatttct 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 212 - 110
Alignment:
Q  189 cttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttct 288  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  212 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaaaggtggtatttat 113  T
Q  289 gtg 291  Q
    |||    
T  112 gtg 110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6970 - 6888
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6970 tatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 54210 - 54312
Alignment:
Q  189 cttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttct 288  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  54210 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaatggtggtattttt 54309  T
Q  289 gtg 291  Q
    |||    
T  54310 gtg 54312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 52 - 274
Target Start/End: Original strand, 2636 - 2858
Alignment:
Q  52 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 151  Q
    ||||| |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || ||||||||||    
T  2636 ggtgtgtttatggagtacatgaatcgcatttttcatgcatttttggatcgtttcgtggttgtattcattgatgatattttgatttactccaagtctgagg 2735  T
Q  152 aagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 251  Q
    |||| |||| ||||||||||| || |   |||||||| |||||||||||  |  | | ||| || || || |||||||| || |||||||| ||  ||||    
T  2736 aagaacatgctgagcatttgaagactagtttgcaagtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaattctggttgaaagagatgag 2835  T
Q  252 tttccttggtcatgtgatttcta 274  Q
    ||| ||||| ||||| |||||||    
T  2836 ttttcttggccatgttatttcta 2858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 151195 - 151064
Alignment:
Q  142 aagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttga 241  Q
    |||||||| ||||| |||| ||||||||||| | | ||||||||||| |||||||||||  || | | ||| || ||||||||||| || || |||||||    
T  151195 aagtctgaagaagaacatgctgagcatttgaagctggtgttgcaagtgttgaaagagaataagctttatgcgaaattgtctaagtgcgaattctggttga 151096  T
Q  242 aggaagtgagtttccttggtcatgtgatttct 273  Q
    | |||||||| || || || ||||| ||||||    
T  151095 aagaagtgagctttctaggacatgtaatttct 151064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 13093 - 13194
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  13093 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttggttgcgggaagtgagtttccttggtcatgtgatttcttagggtggtatttctg 13192  T
Q  290 tg 291  Q
    ||    
T  13193 tg 13194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 10 - 273
Target Start/End: Complemental strand, 5328 - 5066
Alignment:
Q  10 tatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtgg 109  Q
    ||||| ||||| |||||||| || || ||  | |||||||||||||| || ||| | ||||||||| | || |||||| | ||| |||| || |||||||    
T  5328 tatgaatattcagtgatgcctttcggtgttacgaatgcgccaggtgtgttcatg-agtacatgaatcgtatttttcatgcgtatttggatcgctttgtgg 5230  T
Q  110 tggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtg 209  Q
    | |||||||| || ||||||||| | || || ||| |||| ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  |||| |     
T  5229 ttgtgttcattgacgatattttgatatactccaagactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttata 5130  T
Q  210 tgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| ||||||    
T  5129 tgcaaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttatttct 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 72; Significance: 9e-33; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 274
Target Start/End: Original strand, 24655 - 24886
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| |||||||| |||||||||||| | || || |    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    || |||| ||||| |||| ||||||||||| |||||| |||||||| |||||||||||  |||| | ||| || || || |||||||| || ||||||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgctaaattatcaaagtgtgaattctggttgaa 24854  T
Q  243 ggaagtgagtttccttggtcatgtgatttcta 274  Q
     || || ||||| ||||| ||||| |||||||    
T  24855 agaggtaagttttcttggccatgttatttcta 24886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 214 - 291
Target Start/End: Complemental strand, 181937 - 181860
Alignment:
Q  214 aagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  181937 aagttgtctaagtgtgaattttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtg 181860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 150675 - 150557
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    ||||| |||||| | ||||| ||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||    
T  150675 gatgacattttgatttattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgt 150576  T
Q  221 ctaagtgtgagttttggtt 239  Q
    | |||||||| || |||||    
T  150575 caaagtgtgaattctggtt 150557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 193953 - 194043
Alignment:
Q  170 tgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    ||||||||||||| ||||| |||||||| ||  ||| || ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  193953 tgaggattgtgttacaagttttgaaagaaaagaagtcgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 194043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 3110 - 2853
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 115  Q
    ||||| |||||||| || || ||  ||||||| || ||||| |||||||||||||||||| | || |||||| ||||| |||| ||||| ||||| ||||    
T  3110 tattcagtgatgcctttcggtgttactaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgt 3011  T
Q  116 tcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 215  Q
    |||| |||||||||||| | || || |||||||| ||||| |||| ||| ||||||| |||| | ||||||||  ||||||||||  |||| | |||  |    
T  3010 tcatcgatgatattttgatataatctaagtctgaagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagagaagaagttatatgctca 2911  T
Q  216 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
     ||||| |||||||| || |||||||| || |||||||||| ||| ||| | ||||||    
T  2910 attgtcaaagtgtgaattctggttgaatgaggtgagtttccgtggccatattatttct 2853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 7859 - 8011
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  7859 gatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 7958  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||| ||| || |||||||| | |||||| || ||||| ||||| ||||||    
T  7959 ctaagtatgaattctggttgaaaggagtgagctttcttggacatgttatttct 8011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 121 - 353
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||||||||| |||||| ||||||||||    |||||||| |||| ||| ||||| |||||| | |||||    
T  121 ctaatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattc 220  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   | |||||||||||||  || ||| |||| |||||||||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  221 gacaacggaggaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 320  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||||||||| ||| | ||||||    
T  321 agtgaagtaagtttccttggccatattatttct 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 1969 - 2201
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||| | || |||||| | ||| | || || ||  |||| |||||||| |||||||||||| | || ||    
T  1969 ctaatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactc 2068  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||||| | ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  ||||   |||||||||||| |||||||| || ||||||    
T  2069 taagtctcaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttaaatgccaagttgtcaaagtgtgaattctggttg 2168  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    || || |||||||| ||||||||||| ||||||    
T  2169 aatgaggtgagttttcttggtcatgttatttct 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 114745 - 114513
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  114745 ctaatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 114646  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    ||   |||||||||||||||  || ||| ||| |||||| |||||||| |||||||||||  | |||| |||||| ||||| ||||| ||||| |||||     
T  114645 aagaactgaggaagagcatgcagaacatctgatgattgtattgcaagtattgaaagagaagaaattgtatgccaaattgtcgaagtgcgagttctggtta 114546  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    || ||||||||||| ||||| ||| | ||||||    
T  114545 aatgaagtgagttttcttggccatattatttct 114513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 108002 - 108163
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | || || |||  ||| || || |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  108002 gtgttcatcgatgatattttgatttactccaagattgaagaggaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 108101  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||| |||||||||||||| || |||||||| || || ||||| ||||| ||||| ||||||    
T  108102 ccaaattgtctaagtgtgaattctggttgaaagaggtaagttttcttggccatgttatttct 108163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 273
Target Start/End: Original strand, 27337 - 27599
Alignment:
Q  10 tatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtgg 109  Q
    ||||| |||||||||||||| || || ||  |||||||||| || || ||| ||||||| |||||| | || |||||| ||||||| || |||||||| |    
T  27337 tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg 27436  T
Q  110 tggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtg 209  Q
    | ||||| |||||||||||  || | || || ||||||||||| || ||||  ||||||||||| ||||| ||||||||  ||||||||||  |||| |     
T  27437 ttgtgtttatagatgatatcctgatatactctaagtctgaggaggaacatgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttata 27536  T
Q  210 tgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||| || ||||| || || |||||||| | ||||||||| ||||||||| | ||||||    
T  27537 tgccaagttatcaaagtgagaattctggttgaacg-agtgagttttcttggtcatattatttct 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 284
Target Start/End: Complemental strand, 76571 - 76366
Alignment:
Q  79 atatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattg 178  Q
    ||||| ||||||||||||||||  ||| |||| ||||| ||||| ||||| ||||||||||||||||| ||||| ||||||| ||||||| | ||  ||     
T  76571 atattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtgtattcaaagtcagaggaggagcatgttgagcatcttagagtta 76472  T
Q  179 tgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaaggg 278  Q
    |||||||    || ||  ||||  |||||| ||| ||||| || ||||||||||||||| ||  |||||||||||| ||| || |||||||||| | |||    
T  76471 tgttgcacacttttaagaagaagaagttgtttgctaagttttcgaagtgtgagttttggctgcgggaagtgagttttcttagttatgtgatttcgatggg 76372  T
Q  279 tggtat 284  Q
    ||||||    
T  76371 tggtat 76366  T

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Target: scaffold0335 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 10979 - 11080
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctg 289  Q
    ||||| || |||||||| ||||| |||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||    
T  10979 ttgaaggaaaaccagttatgtgctaagttgtctaagtgcgaattttggttgaagggagtgattttccttggtcatgtgatttctaagggtggtatttatg 11078  T
Q  290 tg 291  Q
    ||    
T  11079 tg 11080  T

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Target: scaffold0037 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 115172 - 115333
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| |||||| ||||||||  |||| |||||  |||| | ||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagtagttatatg 115271  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||| |||||||| ||||||||||| || |||||||| ||||| ||||| ||||||    
T  115272 ccaagttgtcaaagtgtgaattttggttgaaagaggtgagttttcttggccatgttatttct 115333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 272
Target Start/End: Complemental strand, 14643 - 14423
Alignment:
Q  52 ggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgagg 151  Q
    ||||| |||||||||||||||||| |||| |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| | || || ||||| || |    
T  14643 ggtgtgtttatggaatacatgaatcgaatttttcatgcgtttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactcgaagtccgaag 14544  T
Q  152 aagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgag 251  Q
    ||||||||| ||||||||||| |||||| ||||||||  ||||||||||  || | | | | || ||||| ||||||||||| |||||||| || || ||    
T  14543 aagagcatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatattctaaattgtcaaagtgtgagttctggttgaatgaggttag 14444  T
Q  252 tttccttggtcatgtgatttc 272  Q
    ||| ||||| ||||| |||||    
T  14443 ttttcttggccatgttatttc 14423  T

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Target: scaffold0028 (Bit Score: 65; Significance: 1e-28; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 273
Target Start/End: Original strand, 48634 - 48866
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| |||| |||||    |||||||| || ||||| ||||| |||||| | |||||    
T  48634 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattc 48733  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||||||||||||||  || ||| |||||||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||| |||||||||||     
T  48734 gagaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggtta 48833  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  48834 agtgaagtgagttttcttggccatattatttct 48866  T

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Target: scaffold0028; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 115 - 291
Target Start/End: Complemental strand, 17048 - 16872
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| ||||  |||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  17048 ttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 16949  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    | ||||||||||||||||| |||||||  ||||||||||||||||| ||||| |||||||  | ||||||| |||||    
T  16948 aattgtctaagtgtgagttctggttgagagaagtgagtttccttggccatgttatttctagtgatggtattgctgtg 16872  T

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Target: scaffold0028; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 291
Target Start/End: Complemental strand, 10586 - 10410
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| ||||  |||| |||| ||||||| | | |||||| |||||||| |||||||||||  |  | | |||||    
T  10586 ttcatcgatgatattttgatttactccaagactgaaaaagaacatgctgagcatctaaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 10487  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    | ||||||||||||||||| |||||||  ||||||||||||||||| ||||| |||||||  | ||||||| |||||    
T  10486 aattgtctaagtgtgagttctggttgagagaagtgagtttccttggccatgttatttctagtgatggtattgctgtg 10410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 112 - 272
Target Start/End: Complemental strand, 45266 - 45106
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    |||||||| |||||||||||| | || || ||| |||| ||||| |||| ||| ||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  45266 gtgttcatcgatgatattttgatttactccaagactgaagaagaacatgctgatcatctgaagattgtcttgcaagtattgaaagagaaaaaactttatg 45167  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    |||| |||||||||||||| || |||||||| || |||||||| ||||| ||||| |||||    
T  45166 ccaaattgtctaagtgtgaattctggttgaaagaggtgagttttcttggccatgttatttc 45106  T

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Target: scaffold0028; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 104892 - 104943
Alignment:
Q  240 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  104892 gaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttatgtg 104943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 94054 - 94093
Alignment:
Q  205 ttgtgtgccaagttgtctaagtgtgagttttggttgaagg 244  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  94054 ttgtgtgctaagttgtctaagtgtgagttttggttgaagg 94093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 46 - 273
Target Start/End: Original strand, 6014 - 6241
Alignment:
Q  46 gcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagt 145  Q
    ||||||||||| |||||||| ||||||||| | || || ||| | ||||| || ||||| ||||| |||||||| || ||||||||| | || || |||     
T  6014 gcgccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaagg 6113  T
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| |||||| |||| |||||| ||||||||  ||||||||||  |||| | ||| |||||||| |||||||| || |||||||| ||    
T  6114 ctgaagaagaacatgctgagcaattgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatga 6213  T
Q  246 agtgagtttccttggtcatgtgatttct 273  Q
     || | ||| ||||||||||| ||||||    
T  6214 ggtcatttttcttggtcatgttatttct 6241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 266
Target Start/End: Complemental strand, 495202 - 494979
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| ||||| || ||||||||| | || |||||| | | | |||| ||||||||||| |||||||| || ||||||||| | || || |    
T  495202 aatgcgccaggtgtgtttattgagtacatgaatcgtatttttcatgcgtttttggatcgttttgtggttgtgttcatcgacgatattttgatatactcga 495103  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    ||||||| ||||| |||| |||| |||||| |||||| ||||||||  ||||||||||  || | | ||| || ||||| |||| |||||| ||||||||    
T  495102 agtctgaagaagaacatgctgagtatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtctgagttctggttgaa 495003  T
Q  243 ggaagtgagtttccttggtcatgt 266  Q
     || |||||||| ||||| |||||    
T  495002 tgaggtgagttttcttggccatgt 494979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 453293 - 453531
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||| |||   |||||||| || || ||  |||||||||| ||||| ||||||||||| |||||  |||| || ||| | ||||||||      
T  453293 tatggacactatgaatataaagtgatgcctttcggtgttactaatgcgcctggtgtgtttatggaatatatgaaccgaattttccatgcctatctggata 453392  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      |||||||| ||||| || ||||| || ||| | ||||  ||| |||| ||||||||||  || ||| ||| |||||| || ||||| |||||||||||    
T  453393 aatttgtggttgtgtttattgatgacatcttgatttatttgaagactgaagaagagcatgcagaacatctgaagattgtattacaagtattgaaagagaa 453492  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
      |||||| || ||||||||| || |||||||| |||||    
T  453493 gaagttgtatgtcaagttgtcaaaatgtgagttctggtt 453531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 515595 - 515695
Alignment:
Q  163 gagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtc 262  Q
    |||||| |||| ||||| |||||||| |||||||||||   ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || ||||    
T  515595 gagcatctgagaattgtcttgcaagtgttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagttttctgggtc 515694  T
Q  263 a 263  Q
    |    
T  515695 a 515695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 239
Target Start/End: Original strand, 5209 - 5407
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  5209 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 5308  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     |||  ||| ||||||||||  |||||| ||| ||||||||||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||    
T  5309 taagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggtt 5407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 46682 - 46776
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 284  Q
    ||||| ||||| || |||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  46682 ttgaaggagaatcaattgtgtgctaagttgtctaagtgtgaattttggttgcgggaagtgagtttccttggtcatgtgatttctaagagtggtat 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 41922 - 41685
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||| |||||||| |||   |||||||| || |||||  |||||||||| ||||| |||||||| || ||||| ||||| || ||| ||||| ||||      
T  41922 tatggtcactatgaatataaggtgatgcctttcggagttactaatgcgcctggtgtgtttatggagtatatgaacagaattttgcatgcttatatggata 41823  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      |||||||| ||||| || ||||| || ||  | ||||| |||  ||| ||||||||||  |||||| ||| ||||||||||||||| ||| |||| ||    
T  41822 aatttgtggttgtgtttattgatgacatcttaatttattctaagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttg-aagaaaa 41724  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
      |||||| || |||| |||| |||||||| || |||||    
T  41723 gaagttgtatgacaagctgtccaagtgtgaattctggtt 41685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 51527 - 51624
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||| || ||||| ||||| |||||| | || || ||| |||| |||||  ||| ||||||| ||| |||||| |||||||| |||||||||||    
T  51527 tttgtggttgttttcatcgatgacattttgatttactccaagactgaagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaa 51624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 264
Target Start/End: Original strand, 84656 - 84862
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    ||||||||||| |||||| | || |||||| ||||||| || |||||||| || ||||| |||||||||||| || | || || ||| |  |||| ||||    
T  84656 tttatggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatattatgatatactctaagaccaaggaggagc 84755  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    |||  ||||||||||| ||||| ||||||||  ||||||||||  |||| | ||||||||| || ||||| || || ||||||||  |||||||||||||    
T  84756 atgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcaaagtgcgaattctggttgaacaaagtgagtttcct 84855  T
Q  258 tggtcat 264  Q
    |||||||    
T  84856 tggtcat 84862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 273
Target Start/End: Complemental strand, 268729 - 268562
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||||||||| ||||||||||||||| | ||||| ||  |||| || || || |  || ||  ||| ||||||||||||  | ||||||||||   |||    
T  268729 gtggtggtgtttatagatgatattttgatttattctaaaactgaagaggaacacgccgaacacctgaagattgtgttgcagattttgaaagagagaaagt 268630  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| |||||||||||| ||||| ||||| ||||| |  |||||||||||||| || ||||| ||||||    
T  268629 tgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccatgttatttct 268562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 147 - 419
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||   |||||||| || || ||  | ||||| || ||||| || ||||| ||||||||| | || |||||| | | | |||| |    
T  147 tatggacattatgagtataacgtgatgccgttcggtgttacaaatgcacctggtgtgttgatggagtacatgaatcgcatttttcatgcatttttggatc 246  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || |||||||||||| |||||||||||    
T  247 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgtgttgcaagtgttgaaagagaa 346  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      || | | ||| || ||||| |||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  347 gaagctttatgctaaattgtcaaagtgtgaattctggttgaatgaggtgagttttcttggccatgttatttct 419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 10821 - 11093
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||| ||| ||||| | || |||||| | ||| | || |    
T  10821 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 10920  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| |||| |||||||||||||||||| ||||||||  |||| |||||    
T  10921 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 11020  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      || | | ||| |||||||| ||||||||  | |||||||| ||||| ||||| ||||| ||||| ||||||    
T  11021 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttatttct 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 17013 - 17285
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  | |||||||||||||| |||||||| ||| ||||| | || |||||| | ||| | || |    
T  17013 tatggacattacgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatc 17112  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    | ||  |||| |||||||| |||||||||||| | || || ||| |||| ||||| |||| |||||||||||||||||| ||||||||  |||| |||||    
T  17113 gcttcatggttgtgttcattgatgatattttgatatactctaagactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaa 17212  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      || | | ||| |||||||| ||||||||  | |||||||| ||||| ||||| ||||| ||||| ||||||    
T  17213 gaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttatttct 17285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 11424 - 11591
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||||||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  | |    
T  11424 gtggtggtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaat 11523  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||| || |||||||||||||| || |||||||||||||| ||||| ||||| ||||| ||||||    
T  11524 tttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttatttct 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 50196 - 50044
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||    
T  50196 gatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgt 50097  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || ||||||||||| |||||| | || ||||| ||||| ||||||    
T  50096 ctaagtgcgaattttggttgaaagaagtgggctttcttggacatgttatttct 50044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 53741 - 53662
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||    
T  53741 gatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaa 53662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 14601 - 14831
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | | | ||||  |||| ||||| |||||||| || ||||||||| | || || |    
T  14601 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatagtttcgtggttgtgttcatcgacgatattttgatatactcca 14700  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    ||  ||| ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  |||| | ||| || ||||| |||||||| || | ||||||    
T  14701 agattgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgaattctagttgaa 14800  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || |||||||| ||||| ||||| ||||||    
T  14801 agaggtgagttttcttggccatgttatttct 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 239
Target Start/End: Original strand, 176464 - 176662
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| |||||||||||||| || ||| ||||| |||| || ||||| || || || || ||||| || ||| | |||||    
T  176464 ctaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattc 176563  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     |||||||| ||||||||||  |||||||| | |||||||||| |||| ||||| || ||  |||||| |||||||||||| || ||||| || |||||    
T  176564 taagtctgaagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaatgaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 176662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 273
Target Start/End: Complemental strand, 4094 - 3868
Alignment:
Q  47 cgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtc 146  Q
    |||||||||| |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| |||||||| || ||||||||| | || || ||| |    
T  4094 cgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactccaagac 3995  T
Q  147 tgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaa 246  Q
    ||| ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  || | | ||| || ||||| |||||||| || |||||||| ||     
T  3994 tgaagaagaacatgctgagcatttgaagattgtattgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtgtgaattctggttgaaagag 3895  T
Q  247 gtgagtttccttggtcatgtgatttct 273  Q
    |||||||| |||||  |||| ||||||    
T  3894 gtgagttttcttggcaatgttatttct 3868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 40453 - 40675
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| ||||||||  |||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  40453 ctaatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 40552  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| ||||| || || |||||||| |||||     
T  40553 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggtta 40652  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    || ||||| ||||| || |||||    
T  40653 aatgaagtaagttttctgggtca 40675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 228
Target Start/End: Complemental strand, 17061 - 16876
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||| ||||||||| | || |||||| | ||| | || || || ||||| |||||||| || ||||||||| | || || |    
T  17061 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 16962  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgt 228  Q
    || |||| ||||| |||| ||||||||||| |||||| |||||||| |||||||||||  |||| | |||||| ||||| ||||||    
T  16961 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgccaaattgtcaaagtgt 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 115 - 291
Target Start/End: Complemental strand, 9478 - 9302
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||  | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | |||||    
T  9478 ttcatcgatgatatttttatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcca 9379  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtatttctgtg 291  Q
    | ||||||||||||||||| |||||||| ||||||||||| ||||| ||||| |||||| | | ||||||| |||||    
T  9378 aattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttatttctgatgatggtattgctgtg 9302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 103459 - 103187
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    ||||||||||||||||||   |||||||| || || ||  | |||||||||||||| |||||||| | ||||||| | || |||||| | | | |||| |    
T  103459 tatggacactatgagtataaagtgatgcctttcggtgttgcaaatgcgccaggtgtgtttatggagtgcatgaatcgcatttttcatgcatttttggatc 103360  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| ||||| || ||||| |||||||||||| | || || |||||||||||||| ||||  || ||||||| || ||| ||||||||  ||||||||||    
T  103359 gtttcgtggtagtattcatcgatgatattttgatttactccaagtctgaggaagaacatgccgaacatttgaagactgttttgcaagtgctgaaagagaa 103260  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      || | | ||| || || || |||||||| || || ||||| || |||||||| ||||| ||||| ||||||    
T  103259 gaagctttatgctaaattatcaaagtgtgaattctgattgaaagaggtgagttttcttggccatgttatttct 103187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 38085 - 38300
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || |  |||||||| ||||| |    
T  38085 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactacaagtctgaagaagaac 38184  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||| |||||||| || ||    
T  38185 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagctttct 38284  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  38285 tggacatgttatttct 38300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 2902 - 2683
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| |||| |||||    || ||||| ||||| || ||||| || ||| | |||||    
T  2902 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgacatcttgatttattc 2803  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    |||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||||||  |||||| ||||||||||||||| |||||||| |||||     
T  2802 aaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtctaaatgtgagttctggtta 2703  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  2702 agtgaagtaagttttcttgg 2683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 11012 - 10782
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||| ||||| |||||||| |||||||||||||| || ||| ||||| |||| |  ||||| || ||||| || ||||| || ||| | ||||| |    
T  11012 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcaatttgtagttgtgtttattgatgacatcttgatttattcta 10913  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    || |||| |||||||||   |||||||| | |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || ||||| |     
T  10912 agactgaagaagagcatacagagcatttaaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttaag 10813  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     ||||| ||||| ||||| ||| | ||||||    
T  10812 tgaagtaagttttcttggccatatcatttct 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 15343 - 15573
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||| |||||||||| ||||||||| | || |||||| | | | |||| ||||| ||| | |||||||| || ||||||||| | || || |    
T  15343 aatgcgccaggtatctttatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtgattgtgttcatcgacgatattttgatatactcca 15442  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    || |||| ||||| || | ||||||||||| |||||| ||||||||  | ||||||||  |||| | ||| || ||||| |||||||| || | ||||||    
T  15443 agactgaagaagaacaagctgagcatttgaagattgttttgcaagtgctaaaagagaaaaagttatatgctaaattgtcaaagtgtgaattctagttgaa 15542  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || |||||||| ||||| ||||| ||||||    
T  15543 agaggtgagttttcttggccatgtaatttct 15573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 260
Target Start/End: Original strand, 5487 - 5689
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||||||| |||| |||||||    
T  5487 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 5586  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    |||  || ||| ||| ||||||||||||||| |||||||||||  |||||| |||||||||||| || |||||||| ||||| |  ||||| ||||| ||    
T  5587 atgcagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttct 5686  T
Q  258 tgg 260  Q
    |||    
T  5687 tgg 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 260
Target Start/End: Original strand, 9918 - 10120
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||||||| |||| |||||||    
T  9918 tttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagc 10017  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    |||  || ||| ||| ||||||||||||||| |||||||||||  |||||| |||||||||||| || |||||||| ||||| |  ||||| ||||| ||    
T  10018 atgcagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttct 10117  T
Q  258 tgg 260  Q
    |||    
T  10118 tgg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 7209 - 7439
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    ||||| || ||||| |||||||| ||||||||| |||| |||||| | | | |||| |||||  |||| || ||||| ||||| |||||||| || || |    
T  7209 aatgcacctggtgtgtttatggagtacatgaatcgaatctttcatgcatttttggatcgtttcatggttgtattcatcgatgacattttggtttactcca 7308  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    || |||| ||||| |||| ||||||||||| || ||| |||||||| |||||||||||  |  | | ||| || ||||| |||||||| || ||||||||    
T  7309 agactgaagaagaacatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaa 7408  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || |||||||| ||||| ||||| ||||||    
T  7409 tgaggtgagttttcttggccatgttatttct 7439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 271
Target Start/End: Complemental strand, 22887 - 22661
Alignment:
Q  45 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaag 144  Q
    |||||||||||| |||||||| ||||||||| | || |||||| | ||| |||| |  || ||||| ||||||||  ||||||||||| | || || |||    
T  22887 tgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatcacttcgtggttgtgttcatcaatgatattttgatatactctaag 22788  T
Q  145 tctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagg 244  Q
    ||||| ||||| ||   ||||||||||| |||||| ||||||||   ||| || ||  |||| | |||||||||||| ||||||||||| |||||||| |    
T  22787 tctgaagaagaacacactgagcatttgaagattgttttgcaagtgccgaaggaaaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatg 22688  T
Q  245 aagtgagtttccttggtcatgtgattt 271  Q
    | || ||||| ||||| ||||| ||||    
T  22687 aggtaagttttcttggccatgttattt 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 38014 - 38172
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| |    
T  38014 ttcatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcta 38113  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  38114 aattatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgttatttct 38172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 6874 - 6717
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||| || ||| | ||||| ||| |||||||||||||||  || ||| ||| |||||| |||||||| |||||||||||      
T  6874 tttgtggttgtgtttattgatgacatcttgatttattctaagactgaggaagagcatgtagaacatctgaagattgtattgcaagtattgaaagagaaga 6775  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| |||||||||||| || |||||||| ||||| |  ||||||||||| |||||    
T  6774 agttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtgagttttcttgg 6717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 946 - 1161
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| |  |||||||| || |||||||||| ||||||| | || || |||||||| ||||| |    
T  946 tttatggagtacatgaatcgcatctttcatgcatttttggatcagtttgtggttgttttcatagatggtattttgatttactccaagtctgaagaagaac 1045  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || || ||||||||||| || |||||||| || |||||||| ||    
T  1046 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtgagttttct 1145  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  1146 tggacatgttatttct 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 1179 - 948
Alignment:
Q  42 taatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattca 141  Q
    ||||| ||| ||||| |||||||| || ||||| ||||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | ||||||    
T  1179 taatgtgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattca 1080  T
Q  142 aagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttga 241  Q
    ||| |||| ||||||||||  || ||| |||  ||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| | ||| |    
T  1079 aagactgaagaagagcatgcagaacatctgaatattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctagttaa 980  T
Q  242 aggaagtgagtttccttggtcatgtgatttct 273  Q
    | ||||| ||||| ||||| ||| | ||||||    
T  979 atgaagtaagttttcttggccatattatttct 948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 58 - 273
Target Start/End: Complemental strand, 3601 - 3386
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| ||||||||||| || ||||| |||||||||||| | || || || ||||| ||||| |    
T  3601 tttatggagtacatgaatcgcatctttcatgcatttttggatcgttttgtggttgttttcattgatgatattttgatttactccaactctgaagaagaac 3502  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||||||| | | || |||||| | |||||||||||  |  | | ||| || || ||||||||||| || |||||||| ||||||||||| ||    
T  3501 atgctgagcatttgaagctggttttgcaattgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagtgagttttct 3402  T
Q  258 tggtcatgtgatttct 273  Q
    ||| ||||| ||||||    
T  3401 tggccatgttatttct 3386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 9062 - 8892
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||      
T  9062 tttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaaga 8963  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  | | ||| || |||||||||||||| || |||||||| ||||||||||| || || ||||| ||||||    
T  8962 aactttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggccatgttatttct 8892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 263
Target Start/End: Original strand, 31439 - 31661
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| || || ||||||||||| |||||  |||| || ||| ||| |||||     |||||||||||||| || ||||||||| || | |||||    
T  31439 ctaatgcgcctggggtatttatggaatatatgaaccgaattttccatgcttttctggttaaatttgtggtggtgtttattgatgatattctgatttattc 31538  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| || |||||||  |||||| ||| |||| | ||||||||||||||||| ||  |||||| ||| ||| |||| ||||||||||| |||||     
T  31539 taagactgaagaggagcatgcagagcatctgaagattatattgcaagtcttgaaagaaaagaagttgtatgcaaagctgtcaaagtgtgagttctggtta 31638  T
Q  241 aaggaagtgagtttccttggtca 263  Q
    |  ||||||||||| || |||||    
T  31639 agtgaagtgagttttctgggtca 31661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 49290 - 49092
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||| | ||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  49290 ctaatgcgcctggtgtgtttatggagtatatgaacaaaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 49191  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     ||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||||| |||||    
T  49190 taagactgaagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctggtt 49092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 260
Target Start/End: Original strand, 64633 - 64847
Alignment:
Q  46 gcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagt 145  Q
    ||||| ||||| |||||||| || |||||  |||| || ||| ||||||||||    |||||||| ||||| || ||||| || ||  | |||||||||     
T  64633 gcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcaaaga 64732  T
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||||||||  |||||| ||| ||||||||||||||| |||||| ||||  |||||| |||||||||||| || ||||| || ||||| |  ||    
T  64733 ctgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaaagaagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtga 64832  T
Q  246 agtgagtttccttgg 260  Q
    ||| ||||| |||||    
T  64833 agtaagttttcttgg 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 201548 - 201741
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| || || ||||| |||||||| || || ||  ||||  |||| ||||| |||||||| |||||||||||||| || ||| ||||| |||| |    
T  201548 tatggacattacgaatattcagtgatgcctttcggtgttactaacacgccgggtgtgtttatggagtacatgaatagaattttccatgcttatttggatc 201647  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
    | |||||||| ||||| || |||||||||||| | || || ||| |||| ||||| ||||  || ||||||| | ||||||||||||| |||||    
T  201648 ggtttgtggttgtgtttattgatgatattttgatatactctaagactgaagaagaacatgcagaacatttgaaggttgtgttgcaagtgttgaa 201741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 324795 - 324671
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||||| | |||| ||||||||||  || ||| ||| |||||| |||||| | |||||||||||  |||||| ||| |||| ||| |||||||| || |    
T  324795 tattcaaggactgaagaagagcatgtagaacatctgaagattgtattgcaaattttgaaagagaaaaagttgtatgctaagtcgtcgaagtgtgaattct 324696  T
Q  236 ggttgaaggaagtgagtttccttgg 260  Q
    |||| |  ||||| ||||| |||||    
T  324695 ggttaagtgaagtaagttttcttgg 324671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 3807 - 3535
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||||||||| |||   |||||||| || || ||  | ||||| || | ||| |||||||| ||| ||||| | || |||||| | | | |||| |    
T  3807 tatggacactatgaatataaagtgatgcctttcggtgttacaaatgcacctgctgtgtttatggagtacgtgaatcgcatttttcatgcatttttggatc 3708  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| ||||| || ||||| ||||| |||||| | || || ||| |||||||||| |||| ||||||||||| || ||| ||| |||| |||||||||||    
T  3707 gtttcgtggttgttttcattgatgacattttgatttactccaagactgaggaagaacatgctgagcatttgaagactgttttggaagtgttgaaagagaa 3608  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
      |||| | ||| || ||||| |||||||| || |||||||| || |||||||| ||| | ||||| ||||||    
T  3607 aaagttttatgctaaattgtcaaagtgtgaattatggttgaaagaggtgagttttcttagacatgttatttct 3535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 241
Target Start/End: Complemental strand, 11979 - 11779
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||| ||||| |||||| | ||||||||    |||||||| ||||| || ||||||||  |  | |||||    
T  11979 ctaatgcgcctggtgtgtttatggagtatatgaacagaatttttcatgcctatctggataaatttgtggttgtgtttattgatgatatcctaatttattc 11880  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| ||||||||||  |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| || ||||||    
T  11879 taagaatgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttg 11780  T
Q  241 a 241  Q
    |    
T  11779 a 11779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 16825 - 16595
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    ||||| ||||| || |||||||| ||||||||| | || |||||| |   | |||| || || |||||||| || || |||||||||||| | || || |    
T  16825 aatgcaccaggagtatttatggagtacatgaatcgcatctttcatgcacttttggatcggttcgtggtggtttttatcgatgatattttgatttactcca 16726  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    ||||||| ||||| |||| ||||||||||| | | || ||| |||| |||||||||||  || | | ||| || |||||||| || || || ||||||||    
T  16725 agtctgaagaagaacatgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtctaattgcgaattctggttgaa 16626  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     |||||||| || ||||| ||||| ||||||    
T  16625 agaagtgagctttcttggacatgttatttct 16595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 254
Target Start/End: Complemental strand, 25234 - 25086
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    |||||||| || ||||||||||||||| | ||||| ||| |||| || |||||||  ||||| |||| ||||||||||||  | ||||||||||   |||    
T  25234 gtggtggtatttatagatgatattttgatttattctaagactgaagaggagcatgcagagcacttgaagattgtgttgcagattttgaaagagagaaagt 25135  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    ||| |||||||||||| ||||| ||||| ||||| |  |||||||||||    
T  25134 tgtatgccaagttgtcgaagtgggagttctggttaactgaagtgagttt 25086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 43041 - 42905
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||||||| || | ||||||||| |||| ||||||||||  || ||| |||  |||||||||||| | |||||||||||      
T  43041 tttgtggttgtgtttattgatgatattctgatctattcaaagactgaagaagagcatgcagaacatctgaaaattgtgttgcaaatattgaaagagaaga 42942  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    |||||| ||| |||||||| ||||||||||| |||||    
T  42941 agttgtatgctaagttgtcgaagtgtgagttctggtt 42905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 21035 - 20803
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | || |||||    ||||||||||| ||||| ||||| |||||| | |||||    
T  21035 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattc 20936  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |    ||||||||||||||  || ||| |||||| ||| |||||||| || | ||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  20935 tagaaatgaggaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 20836  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  20835 agtgaagtgagttttcttggccatattatttct 20803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 25197 - 24965
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | || |||||    ||||||||||| ||||| ||||| |||||| | |||||    
T  25197 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattc 25098  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |    ||||||||||||||  || ||| |||||| ||| |||||||| || | ||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  25097 tagaaatgaggaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 24998  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||||||||| ||||| ||| | ||||||    
T  24997 agtgaagtgagttttcttggccatattatttct 24965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 1605 - 1824
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || || ||  |||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  1605 ctaatgcgcctggtgtgtttatggagtatataaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 1704  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| ||||||||||  ||  || ||| |||||| |||||||| |||||||||||  |||||| |||||||||||| || |||||||| |||||     
T  1705 taagactgaagaagagcatgcagaagatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggtta 1804  T
Q  241 aaggaagtgagtttccttgg 260  Q
    || ||||| ||||| |||||    
T  1805 aatgaagttagttttcttgg 1824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 3168 - 3271
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||||||| |||| ||||||||||  |||||| ||| |||||| |||||||| |||||||||||  |||||| ||| |||||||| ||||||||||| |    
T  3168 tattcaaagactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttct 3267  T
Q  236 ggtt 239  Q
    ||||    
T  3268 ggtt 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 254
Target Start/End: Complemental strand, 69491 - 69343
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    |||||||| || || |||||||||||| | ||||| ||| |||| || |||||||  || |  |||| ||||||||||||  | ||||||||||   |||    
T  69491 gtggtggtatttattgatgatattttgatttattctaagactgaagaggagcatgcagaacgcttgaagattgtgttgcagattttgaaagagagaaagt 69392  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    ||| |||||||||||| ||||| ||||| | ||| |  |||||||||||    
T  69391 tgtatgccaagttgtcgaagtgcgagttcttgttaagtgaagtgagttt 69343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 1576 - 1734
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| |    
T  1576 ttcattgatgatattttgatttactccaagtctgaagaagaacatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 1675  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | |||||||||||||| || |||||||| |||||||| || ||||  ||||| ||||||    
T  1676 aattgtctaagtgtgaattctggttgaaagaagtgagctttcttgtacatgttatttct 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 2055 - 1857
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    ||||||||||  |||| |||||||| || ||||| ||||| || ||| ||||||||||     ||||||| ||||| || ||||| || ||  | |||||    
T  2055 ctaatgcgcctagtgtgtttatggagtatatgaacagaattttccatgcttatctggataaaattgtggttgtgtttattgatgacatcttaatttattc 1956  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     ||| |||| ||||||||||  |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||    
T  1955 taagactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaataagttgtatgccaagttgtccaaatgtgaattttggtt 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 16058 - 16315
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| ||||||||||| |||||||| || || ||  | || ||||||||||| |||||| | ||||||||| | || |||||| | ||||| || |    
T  16058 tatggacattatgagtattcagtgatgcctttgggtgttacaaacgcgccaggtgtgtttatgtagtacatgaatcgcatttttcatgcgtatctagatc 16157  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| |||||  | ||||| |||||||||||| | || || ||| |||| || ||  ||| ||||||||||| |||| | |||||||| || || |||||    
T  16158 gtttcgtggttatattcatcgatgatattttgatatactctaagactgaagaggaatatgctgagcatttgaagatt-ttttgcaagtgttcaaggagaa 16256  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttg 259  Q
      |||| | ||| |||||||| |||||||| || |||||||| || || ||||| ||||    
T  16257 gaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtaagttttcttg 16315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 9152 - 9034
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||||||| |||| ||||||||||  || ||| ||| ||||||||| ||||| |||||||||||  |||||||||| |||||||| ||||||||||| |    
T  9152 tattcaaagactgaagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaaagttgtgtgctaagttgtcgaagtgtgagttct 9053  T
Q  236 ggttgaaggaagtgagttt 254  Q
     ||| |  |||||||||||    
T  9052 agttaagtgaagtgagttt 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 6055 - 5898
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||||||||||||| | ||  ||||  | | | | || || || ||||| |||||||| |||||||||||| | || || |    
T  6055 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 5956  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| || ||||| |||| ||||||||||| |||||| || ||||| |||||||||||    
T  5955 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 13185 - 13028
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||||||||| |||||||||||||||||| | ||  ||||  | | | | || || || ||||| |||||||| |||||||||||| | || || |    
T  13185 aatgcgccaggtgtgtttatggaatacatgaatcgtattattcaagcattttttgatcgcttcgtggttgtgttcatcgatgatattttgatatactcga 13086  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
    |||| || ||||| |||| ||||||||||| |||||| || ||||| |||||||||||    
T  13085 agtccgaagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaa 13028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 22305 - 22518
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    ||||||| || ||||| |||| ||||||||||||| | || | |||| ||||| | || ||  |||| || |||||||| |||||||||||| | || ||    
T  22305 ctaatgcaccgggtgtatttacggaatacatgaattgcatttctcatgcttatttagatcgcattgttgttgtgttcattgatgatattttgatatactc 22404  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||||||| ||||| || |   ||||||||| |||||| ||||||||  || |||||||   ||| | |||||||||||| |||||||| || ||||||    
T  22405 taagtctgaagaagaacacgccaagcatttgaagattgttttgcaagtgctgcaagagaaaacgttatatgccaagttgtcaaagtgtgaattctggttg 22504  T
Q  241 aaggaagtgagttt 254  Q
    || || ||||||||    
T  22505 aatgaggtgagttt 22518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 230
Target Start/End: Complemental strand, 50996 - 50807
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||||||||| |||||| | ||||||||    ||| |||| ||||| || ||||| || ||  | |||||    
T  50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctggataaatttttggttgtgtttattgatgacatcttaatttattc 50897  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 230  Q
     | | |||| ||||||||||  |||||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || |||||    
T  50896 tatgactgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagataagaagttgtatgccaagttgtccaaatgtga 50807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 31051 - 30899
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || |||||| |  |||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||  || ||||    
T  31051 gatgatattttgatttactccaagtcttaataagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgttaaattgt 30952  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||| || |||||||| |||||||| || ||||| ||||| ||||||    
T  30951 ctaagtgtgaattctggttgaaagaagtgagctttcttggacatgttatttct 30899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2165 - 2117
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgc 49  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2165 tatggacactatgagtattatgtgatgccatttggagtatctaatgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 10986 - 11138
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||  | ||||| ||| |||| || |||||||  || ||| |||||||||| |||||||| || ||||||||  |||||| |||||| ||||    
T  10986 gatgatattttaatttattctaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtatttaaagagaagaagttgtatgccaaattgt 11085  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||| | |  ||||| ||||||||||||||| | ||||||    
T  11086 caaaatgtgagttttggctaagtgaagtaagtttccttggtcatattatttct 11138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 273
Target Start/End: Original strand, 195659 - 195839
Alignment:
Q  93 tctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttg 192  Q
    |||||| ||||||||||| || || || |||||||||||| | || || |||||||| ||||| |||| ||||||| ||| | |||| |||||||| |||    
T  195659 tctggatcgttttgtggttgtctttatcgatgatattttgatttactccaagtctgaagaagaacatgctgagcatctgaaggttgtcttgcaagtgttg 195758  T
Q  193 aaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||||  |  | | ||| ||  | |||||||||||||| |||||||| || || ||||| ||||| ||||| ||||||    
T  195759 aaagagaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggtaagttttcttggccatgtcatttct 195839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 271
Target Start/End: Original strand, 916 - 1126
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| || ||||| |||||||||||| | || || ||||||   ||||| |    
T  916 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgttttcattgatgatattttgatttactccaagtct---gaagaac 1012  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || |||||||||||||| || |||||||  |||||||| || ||    
T  1013 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgagagaagtgagctttct 1112  T
Q  258 tggtcatgtgattt 271  Q
    ||| ||||| ||||    
T  1113 tggacatgttattt 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 1665 - 1884
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || ||||| ||||| |||||| | || |||||    ||||||||  | ||||| ||||| ||| || |  ||||    
T  1665 ctaatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggttctattcattgatgacattctgattaattc 1764  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
    || | | || ||||||||||  || ||| ||| |||||| |||||||| |||||||||||  |||||| |||||| ||||| ||||||||||| |||||     
T  1765 aaggacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggtta 1864  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||||||||| |||||    
T  1865 agtgaagtgagttttcttgg 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 273
Target Start/End: Complemental strand, 180 - 13
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| |||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  ||     
T  180 gtggttgttttcattgatgatattttgatttactccaagtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagc 81  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | | ||| || || ||||||||||| || ||||| || |||||||| || ||||| ||||| ||||||    
T  80 tttatgcgaaattatctaagtgtgaattctggttaaaagaagtgagctttcttgggcatgttatttct 13  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 10242 - 10409
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || ||||| || ||| | ||||||||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||| ||  |||    
T  10242 gtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagt 10341  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| || ||||||||| ||||||||||| ||||| |  ||||| ||||| ||||| ||| | ||||||    
T  10342 tgtatgtcaagttgtcaaagtgtgagttctggttaagtgaagtaagttttcttggccatattatttct 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 260
Target Start/End: Complemental strand, 24400 - 24181
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| || || |||||||| || |||||  |||| || ||| ||| ||||||    |||||||| ||||| || ||||||||| || | |||||    
T  24400 ctaatgcgcctggggtgtttatggagtatatgaaccgaattttccatgcttctctggataaatttgtggttgtgtttattgatgatattctgatttattc 24301  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| || |||||||  || ||| ||| ||||||||||||||| || ||||| ||  |||||| ||| |||||||| ||||||||||| |||||     
T  24300 taagactgaagaggagcatgcagaacatctgaagattgtgttgcaagtattaaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggtta 24201  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  24200 agtgaagtaagttttcttgg 24181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 44537 - 44756
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || ||||| | ||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  44537 ctaatgcgcctggtgtgtttatggagtatatgaaaaaaattttccatgcatatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 44636  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| || | |||||||||    | ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| || ||||| ||||||||     
T  44637 taagactaaagaagagcatacaaaacatctgaagattgtattgcaagtattgaaagaaaataagttgtatgccaagttgtcaaaatgtgaattttggtta 44736  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  44737 agtgaagtaagttttcttgg 44756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 254
Target Start/End: Complemental strand, 53169 - 53018
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| || || || ||||||||| || | ||||| ||| |||| ||||||||||  || ||| ||| ||||||||||||| | |||||||||||      
T  53169 tttgtggttgtatttattgatgatattctgatttattctaagactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaa 53070  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    |||||| ||  |||||||| ||||||||||| ||||| |  |||||||||||    
T  53069 agttgtatgttaagttgtcgaagtgtgagttctggttaagtgaagtgagttt 53018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 273
Target Start/End: Complemental strand, 950 - 720
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    |||||||| || || |||||||| ||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || |  |    
T  950 aatgcgcctggagtatttatggagtacatgaatcgcatctttcatgcatttttggatcggttcgtggttgtttttatcgatgatattttgatttacttca 851  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    ||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||||||| |||| || ||||||||    
T  850 agtctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaacctttatgcgaaattgtctaagggtgaattctggttgaa 751  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     |||||||| || ||||| ||||| ||||||    
T  750 agaagtgagctttcttggacatgttatttct 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 239
Target Start/End: Original strand, 8928 - 9126
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||| | ||||||||   ||| || ||| ||||||||||    |||||||| ||||| || |||||||| ||  | |||||    
T  8928 ctaatgcgcctggtgtgtttatgaagtacatgaacttaattttccatgcttatctggataaatttgtggtcgtgtttattgatgatatctttatttattc 9027  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     ||| |||| ||||||||||  |||||| |||  ||| |||||||||| |||||||| ||  |||||| |||||||||||| || ||||| || |||||    
T  9028 taagactgaagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggtt 9126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 273
Target Start/End: Original strand, 44846 - 44995
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||| | |||||||||||  |  | | |||||| |||||||    
T  44846 gatattttgatatactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaaatgttgaaagagaagaaactttatgccaaattgtcta 44945  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||||| || |||||||| || |||||||| ||||| ||||| ||||||    
T  44946 agtgtgacttctggttgaaagaggtgagttttcttggccatgttatttct 44995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 217542 - 217772
Alignment:
Q  43 aatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaa 142  Q
    ||||| |||||||| |||||||| |||||||||   || |||||| | | | | || ||||| ||||| ||| |||| |||||||||||| | || || |    
T  217542 aatgccccaggtgtgtttatggagtacatgaatcatatttttcatgcgttttttgatcgtttcgtggttgtgatcattgatgatattttgatatactcga 217641  T
Q  143 agtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaa 242  Q
    |||  || ||||| |||| ||||||||||| |||||| ||||||||  ||||||||||  || | | ||  || ||||| ||||||||||| | ||||||    
T  217642 agttcgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatatgttaaattgtcaaagtgtgagttctagttgaa 217741  T
Q  243 ggaagtgagtttccttggtcatgtgatttct 273  Q
     || |||||||| ||||| || || ||||||    
T  217742 tgaggtgagttttcttggccacgttatttct 217772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 120 - 273
Target Start/End: Original strand, 13410 - 13563
Alignment:
Q  120 agatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttg 219  Q
    ||||||||||||| | || || |||||||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || |||    
T  13410 agatgatattttgatttactccaagtctgaagaagaacatgatgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattg 13509  T
Q  220 tctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||| || || ||||| || |||||||| || ||||| ||||| ||||||    
T  13510 tctaagtgcgaattctggttaaaagaagtgagctttcttggacatgttatttct 13563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 1208 - 951
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 115  Q
    ||||| |||||||| || || ||  |||| ||||| || || ||||||||||| |||||| | || |||||| ||||| |||| |  ||||| || ||||    
T  1208 tattcggtgatgcctttcggtgttactaacgcgccgggagtgtttatggaatatatgaatcgtatttttcatgcttatttggatcagtttgttgttgtgt 1109  T
Q  116 tcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 215  Q
    | |||||||||||| || | || || ||| | || || || ||||  ||||||||||| ||||| ||||||||  |||| |||||  |||| | ||||||    
T  1108 ttatagatgatattatgatatactctaagaccgaagaggaacatgcggagcatttgagaattgttttgcaagtactgaaggagaagaagttatatgccaa 1009  T
Q  216 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
     || || |||||||| || |||||||| ||||||| ||| ||||| ||| | ||||||    
T  1008 attatcgaagtgtgaattctggttgaacgaagtgacttttcttggccatatcatttct 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 273
Target Start/End: Complemental strand, 40268 - 40107
Alignment:
Q  112 gtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtg 211  Q
    ||||| || ||||| |||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||    
T  40268 gtgtttatcgatgacattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatg 40169  T
Q  212 ccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | || |||||||||||||| || |||||||| ||||| ||||| ||||| ||||| ||||||    
T  40168 ctaaattgtctaagtgtgaattctggttgaaagaagtaagttttcttggccatgttatttct 40107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 230
Target Start/End: Original strand, 49995 - 50184
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| | ||||||||    |||||||| ||||| || ||||| || ||  | |||||    
T  49995 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacatcttaatttattc 50094  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtga 230  Q
     ||| |||| ||||||||||  |||||| ||| ||||||||| ||||| |||||||| ||  |||||| |||||||||||| || |||||    
T  50095 taagactgaagaagagcatgcagagcatctgaagattgtgtttcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtga 50184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 266
Target Start/End: Original strand, 6468 - 6676
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| || || ||||| || || || |||||||||||| | || || |||||||| ||||| |    
T  6468 tttatggagtacatgaatcgcatctttcatgcgtttttggatcggttcgtggttgtttttatcgatgatattttgatttactccaagtctgaagaagaac 6567  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| || ||||||||||| || || |||||||| |||||| | || ||    
T  6568 atgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattctggttgaaagaagtgtgctttct 6667  T
Q  258 tggtcatgt 266  Q
    ||| |||||    
T  6668 tggacatgt 6676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 274
Target Start/End: Complemental strand, 8541 - 8325
Alignment:
Q  58 tttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagc 157  Q
    |||||||| ||||||||| | || |||||| | | | |||| ||||| ||||| || || || |||||||||||| | || || |||||| ||||||| |    
T  8541 tttatggagtacatgaatcgcatctttcatgcatttttggatcgtttcgtggttgtttttatcgatgatattttgatttactccaagtctaaggaagaac 8442  T
Q  158 atggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttcct 257  Q
    ||  ||||||||||| | | || |||||||| |||||||| ||  ||   | ||| || ||||||||||| || || |||||||| |||||||| || ||    
T  8441 attctgagcatttgaagctggttttgcaagtgttgaaagaaaagaagcattatgcgaaattgtctaagtgcgaattctggttgaaagaagtgagctttct 8342  T
Q  258 tggtcatgtgatttcta 274  Q
    ||| ||||| |||||||    
T  8341 tggacatgttatttcta 8325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 7327 - 7175
Alignment:
Q  121 gatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgt 220  Q
    |||||||||||| | || || ||| | |||||||| |||| ||||||||||| | | || |||||||| |||||||||||  |  | | ||| || ||||    
T  7327 gatgatattttgatttactccaagaccgaggaagaacatgttgagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgcgaaattgt 7228  T
Q  221 ctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||| || ||||| || ||||||||||| ||||| ||||| ||||||    
T  7227 ctaagtgtgaattctggttaaaagaagtgagttttcttggacatgttatttct 7175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 21635 - 21854
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||  | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  21635 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 21734  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| | || ||||||||||  || ||| ||| |||||| |||||||| |||||||||||  |||||| ||| |||||||| || |||||||| |||||     
T  21735 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgcgaagttgtcaaaatgtgagttctggtta 21834  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  21835 agtgaagtaagttttcttgg 21854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 13456 - 13675
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||  | ||||||||    |||||||| ||||| || ||||| || ||| | |||||    
T  13456 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccacgcctatctggataaatttgtggttgtgtttattgatgacatcttgatttattc 13555  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| | || ||||||||||  || ||| ||| |||||| |||||||| |||||||||||  |||||| ||| || ||||| || |||||||| |||||     
T  13556 gaagacagaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgcaaaattgtcaaaatgtgagttctggtta 13655  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  13656 agtgaagtaagttttcttgg 13675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 273
Target Start/End: Original strand, 23299 - 23426
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| ||||||| ||| |||||| || ||||| |||||||||||  |  | | ||||||  ||||||||||||| || |||||||| ||    
T  23299 ctgaagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaactgtctaagtgtgaattctggttgaaaga 23398  T
Q  246 agtgagtttccttggtcatgtgatttct 273  Q
    ||||||||| ||||| ||||| ||||||    
T  23399 agtgagttttcttggccatgttatttct 23426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 254
Target Start/End: Original strand, 12481 - 12632
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| || || || ||| ||||| || | ||||||||| |||| ||||||||||  || ||| ||| ||||||||||||| | |||||||||||      
T  12481 tttgtggttgtatttattgataatattctgatctattcaaagactgaagaagagcatgcagaacatctgaagattgtgttgcaattattgaaagagaaaa 12580  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    |||||| ||| |||||||| |||||| |||| ||||  |  |||||||||||    
T  12581 agttgtatgctaagttgtcaaagtgtaagttctggtaaagtgaagtgagttt 12632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 28751 - 28492
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacc 100  Q
    |||||||| |||||||||   |||||||| || || ||  |||||||||| ||||| |||||||| || ||||| ||||| || ||| | ||||||||      
T  28751 tatggacattatgagtataaggtgatgcctttcggtgttactaatgcgcctggtgtatttatggagtatatgaacagaattttccatgcctatctggata 28652  T
Q  101 gttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaa 200  Q
      |||||||| ||||| || ||||||||  |  | ||||| | |  ||| ||| ||||||  |||||| ||| ||||||||||||||| |||||||| ||    
T  28651 aatttgtggttgtgtttattgatgatatcctaatttattctaggaatgaagaaaagcatgcagagcatctgatgattgtgttgcaagtgttgaaagaaaa 28552  T
Q  201 ccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
      | |||| |||||||||||| || ||||| || ||||| |  ||||| ||||| |||||    
T  28551 gaaattgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttgg 28492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 50365 - 50492
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||  || ||| ||| ||||||||||||||| |||||||||||  |||    
T  50365 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagt 50464  T
Q  206 tgtgtgccaagttgtctaagtgtgagtt 233  Q
    ||| ||| |||||||| ||||| |||||    
T  50465 tgtatgctaagttgtcgaagtgcgagtt 50492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 59399 - 59526
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||  || ||| ||| ||||||||||||||| |||||||||||  |||    
T  59399 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagt 59498  T
Q  206 tgtgtgccaagttgtctaagtgtgagtt 233  Q
    ||| ||| |||||||| ||||| |||||    
T  59499 tgtatgctaagttgtcgaagtgcgagtt 59526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 65787 - 65914
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| || ||||| |||||||||||  | ||||| ||| | || ||||||||||  || ||| ||| ||||||||||||||| |||||||||||  |||    
T  65787 gtggttgtattcattgatgatattttaatttattctaagacggaagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagt 65886  T
Q  206 tgtgtgccaagttgtctaagtgtgagtt 233  Q
    ||| ||| |||||||| ||||| |||||    
T  65887 tgtatgctaagttgtcgaagtgcgagtt 65914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 4362 - 4164
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| |||||||| || |||||  |||| || ||| | ||||||||    |||||||| ||||| || ||| | || ||| | ||||     
T  4362 ctaatgcgcctggtgtgtttatggagtatatgaaccgaattttccatgcctatctggataaatttgtggttgtgtttattgatcacatcttgatttatta 4263  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
     ||| |||| ||||||||||   | ||| ||| |||||| |||||||| |||||||||||  |||||| |||||||||||| || ||||| ||||||||    
T  4262 taagactgaagaagagcatgcataacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgaattttggtt 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 273
Target Start/End: Complemental strand, 8161 - 8003
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || |||| |||||||||  ||| ||||||||||| | | || |||||||| |||||||||||  || | | ||| |    
T  8161 ttcattgatgatattttgatttactccaagtttgaggaagaatatgttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 8062  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | ||||||||||| || || |||||||| |||||||| || |||||  |||| ||||||    
T  8061 aattgtctaagtgcgaattctggttgaaagaagtgagctttcttggatatgttatttct 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 273
Target Start/End: Complemental strand, 17357 - 17199
Alignment:
Q  115 ttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgcca 214  Q
    ||||| |||||||||||| | || || |||| ||| |||||  ||  ||||||||||| | | || |||||||| |||||||||||  || | | ||| |    
T  17357 ttcattgatgatattttgatttactccaagtttgatgaagaatattttgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcga 17258  T
Q  215 agttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    | ||||||||||| || || |||||||| |||||||| || |||||  |||| ||||||    
T  17257 aattgtctaagtgcgaattctggttgaaagaagtgagctttcttggatatgttatttct 17199  T

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Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 9702 - 9775
Alignment:
Q  166 catttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    ||||||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||||||||| |||||    
T  9702 catttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 9775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 19916 - 19989
Alignment:
Q  166 catttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    ||||||| ||||||||||||| | |||||||||||  |||||| ||| |||||||| ||||||||||| |||||    
T  19916 catttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtt 19989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 422 - 579
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||| ||| || | ||||||| | |||| ||| |||||   || ||| ||| ||||||||||||  | |||||||||||      
T  422 tttgtggttgtgtttattgatgacattctgatctattcaaggactgaagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaa 521  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  522 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 4742 - 4899
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||| ||| || | ||||||| | |||| ||| |||||   || ||| ||| ||||||||||||  | |||||||||||      
T  4742 tttgtggttgtgtttattgatgacattctgatctattcaaggactgaagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaa 4841  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  4842 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 4899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 273
Target Start/End: Original strand, 33899 - 34105
Alignment:
Q  67 tacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagc 166  Q
    |||||||||| ||| || ||| ||||| ||||  | || ||||| || || || ||||| |||||| | ||||| | |||||| ||||||||||  ||||    
T  33899 tacatgaataaaattttccatgcttatttggattggttcgtggttgtatttattgatgacattttgatttattctaggtctgaagaagagcatgcagagc 33998  T
Q  167 atttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgt 266  Q
    |||| | |||| |||||||||| || || || ||  || ||| |||||||||||| || ||||| || ||||| |  ||||| ||||| ||||| ||| |    
T  33999 atttaaagattatgttgcaagtgttaaaggaaaagaagatgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatat 34098  T
Q  267 gatttct 273  Q
     ||||||    
T  34099 tatttct 34105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 458 - 615
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||| ||| || | ||||||| | |||| ||| |||||   || ||| ||| ||||||||||||  | |||||||||||      
T  458 tttgtggttgtgtttattgatgacattctgatctattcaaggactgaagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaa 557  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| ||| |||||||| ||||||||||| ||||| |  ||||||||||| |||||    
T  558 agttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttgg 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 233
Target Start/End: Original strand, 14833 - 15025
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| |||||||| |||||||||  ||| || ||| ||| ||||||    ||||| |||||||| || |||||||||||  | |||||    
T  14833 ctaacgcgcctggtgtttttatggagtacatgaatctaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattc 14932  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 233  Q
     |||  |||||| |||||||  |||||| |||| ||||| |||||||| ||||| || ||   ||||| ||| |||||||| || ||||||||    
T  14933 caagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagtt 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 37739 - 37615
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||||||| |||| ||||||||||  || ||| ||| |||||| ||  |||| |||||||| ||  |||||| ||| |||||||| |||||||||||||    
T  37739 tattcaaagactgaagaagagcatgcagaacatctgaagattgtattagaagtattgaaagaaaagaagttgtatgctaagttgtcaaagtgtgagtttt 37640  T
Q  236 ggttgaaggaagtgagtttccttgg 260  Q
    |||| |   |||||||||| |||||    
T  37639 ggttaagtaaagtgagttttcttgg 37615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 272
Target Start/End: Complemental strand, 16261 - 16113
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || |||||||    
T  16261 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaaatttatgctaacttgtcta 16162  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    ||||||| || |||||||| ||| | ||||| ||||| ||||| |||||    
T  16161 agtgtgaattctggttgaaagaattaagttttcttggccatgttatttc 16113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 272
Target Start/End: Complemental strand, 2542 - 2375
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    ||||| ||||| || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |      
T  2542 gtggttgtgtttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaataacc 2443  T
Q  206 tgtgtgccaagtt-gtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttc 272  Q
    | | ||| || || |||||||||||| || |||||||| ||| | ||||| ||||| ||||| |||||    
T  2442 tttatgctaacttggtctaagtgtgaattctggttgaaagaattaagttttcttggccatgttatttc 2375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 264
Target Start/End: Original strand, 42202 - 42450
Alignment:
Q  16 tattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgt 115  Q
    ||||| |||||||| || || ||  |||| |||| ||| || ||||||||||| ||||||   || |||||| ||||| |||| || |||||  | ||||    
T  42202 tattcggtgatgcctttcggtgttactaacgcgcaaggagtgtttatggaatatatgaatcatatttttcatgcttatttggatcgatttgtttttgtgt 42301  T
Q  116 tcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaa 215  Q
    | |||||||||||| || | || || ||| | ||||| || ||||  |||||||||||  |||| ||||||||  |||| |||||  |||| | |||||     
T  42302 ttatagatgatattctgatatactccaagaccgaggaggaacatgccgagcatttgagatttgttttgcaagtgctgaaggagaagaagttatatgccag 42401  T
Q  216 gttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcat 264  Q
     || || ||||| || || |||||||| ||||||||||| |||||||||    
T  42402 tttatcgaagtgcgaattctggttgaacgaagtgagttttcttggtcat 42450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 273
Target Start/End: Original strand, 1067 - 1186
Alignment:
Q  154 gagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtt 253  Q
    |||||||  |||||| |||| |||||||||||||| |||||||| ||   ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||    
T  1067 gagcatgcagagcatctgagaattgtgttgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagtt 1166  T
Q  254 tccttggtcatgtgatttct 273  Q
    | || |||||| | ||||||    
T  1167 ttctgggtcatattatttct 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 2392 - 2611
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||| ||||    |||||||| ||||| || ||||||||| |  | |||||    
T  2392 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattc 2491  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| ||||||||||  |||||| ||| |||| |||||||||| || ||||| |   |||||| ||||||||||||||| ||||| || |||||     
T  2492 taagaatgaagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggtta 2591  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  2592 agtgaagtaagttttcttgg 2611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 10074 - 10241
Alignment:
Q  106 gtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagt 205  Q
    |||||||| || || |||||||| ||  | ||||| ||| |||| || |||||||  || ||| ||||||||||||| |  || |||||||| ||  |||    
T  10074 gtggtggtatttattgatgatatgttaatttattctaagactgaagaggagcatgcagaacatctgaggattgtgttacgtgttttgaaagaaaagaagt 10173  T
Q  206 tgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| |||||| ||||| || |||||||||||||| |  ||||| ||||||||||| ||| | ||||||    
T  10174 tgtatgccaaattgtcaaaatgtgagttttggttaagtgaagtaagtttccttggccatattatttct 10241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 273
Target Start/End: Complemental strand, 17735 - 17608
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaagga 245  Q
    |||| ||||| |||| ||||||||||| | | || |||||||| |||||||||||  |  | | ||| || || ||||||||||| || |||||||| ||    
T  17735 ctgaagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaatctttatgctaaattatctaagtgtgaattctggttgaaaga 17636  T
Q  246 agtgagtttccttggtcatgtgatttct 273  Q
    ||||||||| ||||| ||||| ||||||    
T  17635 agtgagttttcttggccatgttatttct 17608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 260
Target Start/End: Original strand, 29405 - 29624
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||  |||| || ||| ||||| ||||    |||||||| ||||| || ||||||||| |  | |||||    
T  29405 ctaatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattc 29504  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |||  ||| ||||||||||  |||||| ||| |||| |||||||||| || ||||| |   |||||| ||||||||||||||| ||||| || |||||     
T  29505 taagaatgaagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggtta 29604  T
Q  241 aaggaagtgagtttccttgg 260  Q
    |  ||||| ||||| |||||    
T  29605 agtgaagtaagttttcttgg 29624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 34682 - 34741
Alignment:
Q  202 cagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggt 261  Q
    ||||||||||| |||| ||| ||||| |||||||||||| | ||||||||||||||||||    
T  34682 cagttgtgtgctaagtagtcgaagtgcgagttttggttgcaagaagtgagtttccttggt 34741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 1107 - 1193
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| |||||||| || || |||||  |||||| |||||||||||| |||||||| |||||||| |  ||||||||||| |||||    
T  1107 gattgtattgcaagtattaaaggagaagaagttgtatgccaagttgtcgaagtgtgaattttggttaagtgaagtgagttttcttgg 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 4517 - 4423
Alignment:
Q  190 ttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttctaagggtggtat 284  Q
    ||||| |||||  |||||| ||| |||| ||| |||||||||||||||||| |  |||||||||| |||  |||||||||||| ||| |||||||    
T  4517 ttgaaggagaagaagttgtttgctaagtcgtcaaagtgtgagttttggttgcaaaaagtgagttttcttaatcatgtgatttcgaagagtggtat 4423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 36166 - 36080
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| |||||||| |||||||| ||  |||||| |||||||||||| ||||||||||| ||||| |  ||||| ||||| |||||    
T  36166 gattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaagtgtgagttctggttaagtgaagtaagttttcttgg 36080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 273
Target Start/End: Complemental strand, 109754 - 109584
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| ||||| || ||||| ||  || | ||||| ||| |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||||||      
T  109754 tttgtggttgtgtttattgatgacatcgtgatttattctaagactgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaaga 109655  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||| |||||| ||||| || || ||||| ||||| |  ||||| ||||| ||||| ||| | ||||||    
T  109654 agttgtatgccaaattgtcaaaatgcgagttctggttaagtgaagtaagttttcttggccatattatttct 109584  T

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Target: scaffold1477 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 308 - 215
Alignment:
Q  146 ctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggtt 239  Q
    |||| ||||||||||  || ||| ||| |||||| |||||||| |||||||| ||  |||||| |||||||||||| |||||||| || |||||    
T  308 ctgaagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaagtgtgatttctggtt 215  T

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Target: scaffold0215 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 273
Target Start/End: Original strand, 28774 - 28923
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| || || ||||    
T  28774 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatcta 28873  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||||| |||| |||||||| || || ||||| ||||| ||||| ||||||    
T  28874 agtgtaagttatggttgaaagaggtaagttttcttggccatgttatttct 28923  T

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Target: scaffold0215; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 28637 - 28742
Alignment:
Q  95 tggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaa 194  Q
    |||| ||||| ||||| || || || || ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||    
T  28637 tggatcgtttcgtggttgtttttatcgacgatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaa 28736  T
Q  195 agagaa 200  Q
    ||||||    
T  28737 agagaa 28742  T

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Target: scaffold0213 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 273
Target Start/End: Original strand, 4587 - 4688
Alignment:
Q  172 aggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgattt 271  Q
    |||||||| || || || |||||||| ||  |||||| |||||| ||||| || |||||||||||||| |  ||||| ||||||||||||||| | ||||    
T  4587 aggattgtattacaggttttgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggttaagtgaagtaagtttccttggtcatattattt 4686  T
Q  272 ct 273  Q
    ||    
T  4687 ct 4688  T

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Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 80013 - 80170
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||| || ||||| |||||||||||  | ||||| ||| |||| || |||||||   ||||| |||||||||| || || || |||||||| ||      
T  80013 tttgtggtagtattcattgatgatattttaatttattctaagactgaagaggagcatgcaaagcatctgaggattgtattacaggttttgaaagaaaaga 80112  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||| ||| || ||||| || || ||||||||||| |  ||||| |||||||||||    
T  80113 agttgtatgctaaattgtcaaaatgcgagttttggttaagtgaagtaagtttccttgg 80170  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 254
Target Start/End: Original strand, 99682 - 99895
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||||||||| ||||| || ||||| || |||||| |||| || ||| | ||||||||    |||||||| ||||| || ||||| ||| || | |||||    
T  99682 ctaatgcgcctggtgtgttcatggagtatatgaatcgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacattctgatctattc 99781  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     |   |||| ||||||||||  || ||| ||| ||||||||||||| |  | ||||||||  |||| | ||| |||||||| ||||||||||| |||||     
T  99782 tagaactgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaaaagttatatgctaagttgtcgaagtgtgagttctggtta 99881  T
Q  241 aaggaagtgagttt 254  Q
    |  |||||||||||    
T  99882 agtgaagtgagttt 99895  T

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Target: scaffold1646 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 273
Target Start/End: Complemental strand, 1510 - 1278
Alignment:
Q  41 ctaatgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattc 140  Q
    |||| ||||| ||||| || ||||| || |||||  |||| |||||| ||| ||||||    || ||||| || ||||| |||||||||||  | |||||    
T  1510 ctaacgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaattcgtggtagtattcattgatgatattttaatttattc 1411  T
Q  141 aaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttg 240  Q
     ||| |||| || |||||||  || ||| |||||||||| || || || |||||||| ||  |||||| ||| || ||||| || || |||||||||||     
T  1410 taagactgaagaggagcatgcagaacatctgaggattgtattacaggttttgaaagaaaagaagttgtatgctaaattgtcaaaatgcgagttttggtta 1311  T
Q  241 aaggaagtgagtttccttggtcatgtgatttct 273  Q
    |  ||||| ||||||||||| ||| | ||||||    
T  1310 agtgaagtaagtttccttggccatattatttct 1278  T

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Target: scaffold0420 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 238
Target Start/End: Complemental strand, 769 - 634
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    |||||||||||||| || ||||| ||| |  | ||||| ||| |||| || |||||||  || ||| ||| |||||| |||||||| |||||||| ||      
T  769 tttgtggtggtgtttattgatgacattctaatttattctaagactgaagaggagcatgcagaacatctgaagattgtattgcaagtgttgaaagaaaaga 670  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggt 238  Q
    |||||| ||| || ||||| || |||||||||||||    
T  669 agttgtatgctaaattgtcgaaatgtgagttttggt 634  T

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Target: scaffold0278 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 273
Target Start/End: Complemental strand, 555 - 405
Alignment:
Q  122 atgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtc 221  Q
    ||||||||||| | || || |||||||| ||||| |||  ||||||||||| | | || |||||||| |||||||||||  |  | | ||| ||||| ||    
T  555 atgatattttgatttactctaagtctgaagaagaacata-tgagcatttgaagctggttttgcaagtgttgaaagagaagaaactttatgcgaagttatc 457  T
Q  222 taagtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    ||| ||||| ||||||||||| || || ||||| ||||| ||||| ||||||    
T  456 taactgtgaattttggttgaaagaggtaagttttcttggccatgttatttct 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 56062 - 56180
Alignment:
Q  136 tattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtttt 235  Q
    ||||| ||| |||| || |||||||  || ||| |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || |    
T  56062 tattccaagactgaagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattct 56161  T
Q  236 ggttgaaggaagtgagttt 254  Q
    |||| |  |||||||||||    
T  56162 ggttaagtgaagtgagttt 56180  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 262281 - 262191
Alignment:
Q  170 tgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || ||||| |  ||||||||||| |||||    
T  262281 tgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttcttgg 262191  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 195297 - 195207
Alignment:
Q  170 tgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttgg 260  Q
    |||||||||| ||||||||  ||||||||||  |||||| ||| |||||||| || ||||| || ||||| |  ||||||||||| |||||    
T  195297 tgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttcttgg 195207  T

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Target: scaffold0827 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  1 tatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaa 74  Q
    ||||| || ||||||||||| |||||||| |||||||| || || |||||||| || |||||||| || |||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 273
Target Start/End: Original strand, 7896 - 8045
Alignment:
Q  124 gatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtcta 223  Q
    ||||||||| | || || ||| |||| ||||| |||| ||||||| ||| |||||| |||||||| |||||||||||  |  | | ||| ||  | ||||    
T  7896 gatattttgatttactccaagactgaagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaactatcta 7995  T
Q  224 agtgtgagttttggttgaaggaagtgagtttccttggtcatgtgatttct 273  Q
    |||||||||| |||||||| || || ||||| ||||  ||||| ||||||    
T  7996 agtgtgagttctggttgaaagaggtaagttttcttgcccatgttatttct 8045  T

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Target: scaffold0682 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 1936 - 1856
Alignment:
Q  174 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagttt 254  Q
    ||||||||||||  | ||||||||||   |||||| |||||||||||| ||||| ||||| ||||| |  |||||||||||    
T  1936 gattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttt 1856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 263
Target Start/End: Complemental strand, 250744 - 250584
Alignment:
Q  103 tttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatggtgagcatttgaggattgtgttgcaagtcttgaaagagaacc 202  Q
    ||||| || ||||| || ||||| || ||| | ||||| ||| |||| || |||||||  |||||| ||| |||||| |||||||| ||||| || ||      
T  250744 tttgttgttgtgtttattgatgacatcttgatttattctaagactgaagaggagcatgcagagcatctgaagattgtattgcaagtgttgaaggaaaaga 250645  T
Q  203 agttgtgtgccaagttgtctaagtgtgagttttggttgaaggaagtgagtttccttggtca 263  Q
     ||||| ||| |||||||| || |||||||| ||||| |  ||||||||||| || |||||    
T  250644 ggttgtatgctaagttgtcgaaatgtgagttctggttaagtgaagtgagttttctgggtca 250584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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