View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1703_high_4 (Length: 377)
Name: NF1703_high_4
Description: NF1703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1703_high_4 |
 |  |
|
| [»] scaffold0590 (1 HSPs) |
 |  |  |
|
| [»] scaffold0275 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 10 - 361
Target Start/End: Original strand, 41949671 - 41950022
Alignment:
| Q |
10 |
caatgagctaaggcgacatattgttctattaaattctctacggttccaccactccactcctttgatagttatgaaatgatccacnnnnnnnactttgtcc |
109 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
41949671 |
caatgagctaaggcgatgtattgttctattaaattctctatggttccaccactccactcctttgatagttatgaaatgatccactttttttactttgtcc |
41949770 |
T |
 |
| Q |
110 |
cattttattctctttataaaatattaaccatatggattcttacatccaccattatttctagtagatagaatataacctattatatagaaatcaggacgct |
209 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41949771 |
cattttattctcttaataaaatattaaccatatggattcttacatgcaccattatttctagtagatagaatataacctattatatagaaatcaggacgct |
41949870 |
T |
 |
| Q |
210 |
cttgggaacacaacagtagaactcattatttaggaacagtagattgattgattatgtaaatagtatatgaggctctatttagataagcagcttagttaag |
309 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41949871 |
ctagggaacacaacagtagaactcattatttaggaacagtagatggattgattatgtaaatagtatatgaggctctatttagataagcagcttagttaag |
41949970 |
T |
 |
| Q |
310 |
tgcttataggataaatgtttatcatataagtgcttatgtagaagcttcttat |
361 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41949971 |
tgcttataggataaatgtttatcatataagtgcttatgtagaagcttcttat |
41950022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 3101235 - 3101191
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcata |
335 |
Q |
| |
|
||||||||||||| |||||| ||||||| ||||||| |||||||| |
|
|
| T |
3101235 |
gataagcagcttaattaagtccttatagcataaatgcttatcata |
3101191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 3102580 - 3102644
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| |||||| ||||| ||||| | ||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
3102580 |
gataaacagctttattaagcgcttaaaacataaatgtttatcatataactgcttatgtataagct |
3102644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 11393549 - 11393485
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| ||||||| ||||| ||||||| | || |||||||||||||||||||||| || ||||| |
|
|
| T |
11393549 |
gataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagct |
11393485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 11410210 - 11410146
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| ||||||| ||||| ||||||| | || |||||||||||||||||||||| || ||||| |
|
|
| T |
11410210 |
gataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagct |
11410146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 29699133 - 29699199
Alignment:
| Q |
283 |
tctatttagataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||||| ||||| | ||||||||||||||||||| |||||| |||||||||||| |||||||||| |
|
|
| T |
29699133 |
tctatttggataaacgacttagttaagtgcttatagcataaatatttatcatataaatgcttatgta |
29699199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 6918918 - 6918982
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
6918918 |
gataaacagcttacttaagtgtctatagcataagtgtttatcatataagtgcttatgtataagct |
6918982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 27754628 - 27754558
Alignment:
| Q |
279 |
aggctctatttagataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||||| ||| | |||||| |||| ||||||| |||||| ||||| | ||||||| |||||||||||||| |
|
|
| T |
27754628 |
aggctctgtttgggtaagcaacttaattaagtgtttatagtataaacgcttatcatttaagtgcttatgta |
27754558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 349
Target Start/End: Complemental strand, 35220884 - 35220826
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||| ||||||| |||| | |||| ||||||| || |||||||||||||||||||||| |
|
|
| T |
35220884 |
gataaacagcttaattaaatacttacaggataagtgattatcatataagtgcttatgta |
35220826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 787268 - 787232
Alignment:
| Q |
312 |
cttataggataaatgtttatcatataagtgcttatgt |
348 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
787268 |
cttatagcataaatgtttatcatctaagtgcttatgt |
787232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 6950219 - 6950271
Alignment:
| Q |
287 |
tttagataagcagcttagttaagtgcttataggataaatgtttatcatataag |
339 |
Q |
| |
|
||||||||| || |||| |||||||||||||| ||||| | |||||||||||| |
|
|
| T |
6950219 |
tttagataaacaacttaattaagtgcttatagcataaacgcttatcatataag |
6950271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 349
Target Start/End: Original strand, 8062121 - 8062185
Alignment:
| Q |
285 |
tatttagataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||| |||||||| |||| ||||| ||||||| |||| |||||||||| ||||||||||||| |
|
|
| T |
8062121 |
tatttggataagcaacttaattaagcgcttatactataagcgtttatcatagaagtgcttatgta |
8062185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 49365983 - 49365914
Alignment:
| Q |
279 |
aggctctatttagataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgt |
348 |
Q |
| |
|
||||||| ||| ||||| || |||||||||| |||||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
49365983 |
aggctctgtttggataaacaacttagttaagcgcttatagcataaacgtttataatataagtgcttatgt |
49365914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 24263328 - 24263264
Alignment:
| Q |
285 |
tatttagataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||| ||||| ||| ||| |||||||||||||| ||||| ||||| |||||||||| ||||||| |
|
|
| T |
24263328 |
tatttggataaacagtttaattaagtgcttatagcataaacgtttagcatataagtgtttatgta |
24263264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 355
Target Start/End: Complemental strand, 20982304 - 20982254
Alignment:
| Q |
305 |
ttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
|||||||||||||| |||| || |||||||||||||||||||||| ||||| |
|
|
| T |
20982304 |
ttaagtgcttatagcataagtgcttatcatataagtgcttatgtataagct |
20982254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 3951526 - 3951562
Alignment:
| Q |
313 |
ttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
3951526 |
ttatagcataaatgcttatcatataagtgcttatgta |
3951562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 14716647 - 14716595
Alignment:
| Q |
297 |
cagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||||| |||||||||||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
14716647 |
cagcttaattaagtgcttatagcataaggatttgtcatataagtgcttatgta |
14716595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 26516185 - 26516249
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| || |||| ||||| |||||||| |||| | |||||||||||||||||||||| ||||| |
|
|
| T |
26516185 |
gataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagct |
26516249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 312 - 349
Target Start/End: Complemental strand, 32386725 - 32386688
Alignment:
| Q |
312 |
cttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
32386725 |
cttatagtataaatgtttatcatataagtgcttatgta |
32386688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 18264232 - 18264276
Alignment:
| Q |
305 |
ttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
|||||||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
18264232 |
ttaagtgcgtatagtataaacgtttatcatataagtgcttatgta |
18264276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 32386261 - 32386218
Alignment:
| Q |
312 |
cttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
32386261 |
cttatagtataaaagtttatcatataagtgcttatgtataagct |
32386218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 355
Target Start/End: Complemental strand, 3217359 - 3217309
Alignment:
| Q |
305 |
ttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
|||||||||||||| |||| | |||||||||||||||||||||| ||||| |
|
|
| T |
3217359 |
ttaagtgcttatagtataagcgattatcatataagtgcttatgtataagct |
3217309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 4003783 - 4003719
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| || |||| |||||||||||||| |||| | ||||| |||||||||||||||| ||||| |
|
|
| T |
4003783 |
gataaacaacttaattaagtgcttatagcataagtttttatgctataagtgcttatgtataagct |
4003719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 7342091 - 7342140
Alignment:
| Q |
305 |
ttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagc |
354 |
Q |
| |
|
|||||||||||||| ||||||| |||||| ||||||||||||||| |||| |
|
|
| T |
7342091 |
ttaagtgcttatagtataaatgcttatcagataagtgcttatgtataagc |
7342140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 18512602 - 18512548
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgctta |
345 |
Q |
| |
|
|||||||| |||| |||||||||||||| ||||| ||||||||||||| ||||| |
|
|
| T |
18512602 |
gataagcaacttaattaagtgcttatagcataaacatttatcatataagagctta |
18512548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 349
Target Start/End: Original strand, 33640995 - 33641053
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||| ||||||| |||||||||||||| |||| | ||||||||||||||||| |||| |
|
|
| T |
33640995 |
gataaacagcttaattaagtgcttatagaataatcgcttatcatataagtgcttttgta |
33641053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 6360888 - 6360832
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatg |
347 |
Q |
| |
|
||||| ||||||| ||||||||| ||| ||||| ||||||||||||||||| |||| |
|
|
| T |
6360888 |
gataaccagcttaaataagtgcttgtagcataaacgtttatcatataagtgcctatg |
6360832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0590 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0590
Description:
Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 1257 - 1193
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| || |||| |||||| ||||||| ||||| || ||||||||||||||||||||| ||||| |
|
|
| T |
1257 |
gataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagct |
1193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0275 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0275
Description:
Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 2718 - 2782
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| || |||| |||||| ||||||| ||||| || ||||||||||||||||||||| ||||| |
|
|
| T |
2718 |
gataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagct |
2782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 347
Target Start/End: Complemental strand, 5630110 - 5630042
Alignment:
| Q |
279 |
aggctctatttagataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatg |
347 |
Q |
| |
|
||||||| ||| ||||| || |||| |||||| ||||||| |||| |||||||||||||||| |||||| |
|
|
| T |
5630110 |
aggctctgtttggataaacaacttaattaagtccttatagaataagtgtttatcatataagtacttatg |
5630042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 27481477 - 27481413
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatgtagaagct |
355 |
Q |
| |
|
||||| || |||| ||| |||||||||| |||||||||||| ||||||||| ||||||| ||||| |
|
|
| T |
27481477 |
gataaacaacttaattaggtgcttatagcataaatgtttattatataagtgtttatgtataagct |
27481413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 47003983 - 47004029
Alignment:
| Q |
300 |
cttagttaagtgcttataggataaatgtttatcatataagtgcttat |
346 |
Q |
| |
|
|||| |||||||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
47003983 |
cttaattaagtgcttatagcaaaaatgtttatcatataagtgtttat |
47004029 |
T |
 |
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Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 23785149 - 23785187
Alignment:
| Q |
300 |
cttagttaagtgcttataggataaatgtttatcatataa |
338 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
23785149 |
cttaattaagtgcttatagcataaatgtttatcatataa |
23785187 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 1288971 - 1288922
Alignment:
| Q |
300 |
cttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
1288971 |
cttagttcagtgcttatagcgtaagcgtttatcatataagtgcttatgta |
1288922 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Complemental strand, 52324051 - 52324002
Alignment:
| Q |
300 |
cttagttaagtgcttataggataaatgtttatcatataagtgcttatgta |
349 |
Q |
| |
|
|||| |||||||||||||| |||| |||||| ||||||||| |||||||| |
|
|
| T |
52324051 |
cttaattaagtgcttatagcataagtgtttagcatataagtacttatgta |
52324002 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 32417310 - 32417255
Alignment:
| Q |
291 |
gataagcagcttagttaagtgcttataggataaatgtttatcatataagtgcttatg |
347 |
Q |
| |
|
|||||||||| ||| ||||||||||||| ||||||| |||| ||||||||| ||||| |
|
|
| T |
32417310 |
gataagcagcataggtaagtgcttatagtataaatgcttat-atataagtgtttatg |
32417255 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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