View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1703_low_15 (Length: 238)
Name: NF1703_low_15
Description: NF1703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1703_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 46406525 - 46406734
Alignment:
| Q |
1 |
taatgatttttaaataaacaatgcagtacaagaaacgatatatttttgaattaccacacatgttgcttcaaataaaaggggatatgtagttctgtttatt |
100 |
Q |
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| T |
46406525 |
taatgatttttaaataaacaatgtagtacaagaaacgatatatttttgaattaccacacatgttgcttcaaataaaaggggatatgtagttctgtttatt |
46406624 |
T |
|
| Q |
101 |
ctagtattgggagcatgtgtgtgtcactcaatcctattaatcatagtaaaatcactatgattaaaatcaaaccttagaagaaaacaaaattcagaatgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46406625 |
ctagtattgggagcatgtgtgtgtcactcaatcctattaatcatagtaaaatcaccatgattaaaatcaaaccttagaagaaaacaaaattcagaatgaa |
46406724 |
T |
|
| Q |
201 |
gtgtttataa |
210 |
Q |
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|||||||||| |
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| T |
46406725 |
gtgtttataa |
46406734 |
T |
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