View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1703_low_18 (Length: 236)
Name: NF1703_low_18
Description: NF1703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1703_low_18 |
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| [»] scaffold0028 (1 HSPs) |
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Alignment Details
Target: scaffold0028 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 125764 - 125926
Alignment:
| Q |
69 |
actgagtttgcaaggagaagatttgaaaagagagtttctctttctcagcaagtgtaagtacaactcaagtgacatatgctttattcaaaacaccttttca |
168 |
Q |
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| T |
125764 |
actgagtttgcaaggagaagatttgaaaagagagtttctctttctcagcaagtgtaagtacaactgaagtgacatatgctttattcaaaacaccttttca |
125863 |
T |
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| Q |
169 |
aaatcttttgttggatttccctgctttccctcccttacggaagttgaagccttttctcctttg |
231 |
Q |
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| T |
125864 |
aaatcttttgttggatttccatgctttccctcccttacggaagttgaagccttttctcctttg |
125926 |
T |
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