View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1703_low_20 (Length: 221)

Name: NF1703_low_20
Description: NF1703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1703_low_20
NF1703_low_20
[»] chr4 (42 HSPs)
chr4 (1-209)||(46406007-46406215)
chr4 (170-221)||(4949517-4949568)
chr4 (167-221)||(31657654-31657708)
chr4 (170-221)||(28657450-28657501)
chr4 (170-221)||(43769722-43769773)
chr4 (170-210)||(17475321-17475361)
chr4 (174-221)||(22072263-22072310)
chr4 (171-221)||(17683236-17683286)
chr4 (171-221)||(17683359-17683409)
chr4 (171-221)||(39312625-39312675)
chr4 (167-209)||(41082314-41082356)
chr4 (168-210)||(53647445-53647487)
chr4 (168-221)||(26718377-26718430)
chr4 (168-221)||(26731005-26731058)
chr4 (169-209)||(30079844-30079884)
chr4 (170-209)||(13086021-13086060)
chr4 (170-209)||(14010151-14010190)
chr4 (170-209)||(22819648-22819687)
chr4 (170-209)||(23822278-23822317)
chr4 (170-221)||(35500809-35500860)
chr4 (170-221)||(37065999-37066050)
chr4 (170-221)||(54036539-54036590)
chr4 (170-209)||(54669616-54669655)
chr4 (169-207)||(31076052-31076090)
chr4 (171-209)||(33860647-33860685)
chr4 (171-209)||(47099022-47099060)
chr4 (171-209)||(51741357-51741395)
chr4 (171-209)||(51887663-51887701)
chr4 (168-209)||(624345-624386)
chr4 (172-209)||(2401611-2401648)
chr4 (172-221)||(5386385-5386434)
chr4 (168-209)||(9362711-9362752)
chr4 (171-212)||(12799727-12799768)
chr4 (171-208)||(14451393-14451430)
chr4 (170-210)||(9162065-9162105)
chr4 (169-209)||(14527642-14527682)
chr4 (169-221)||(32621636-32621688)
chr4 (169-209)||(36111429-36111469)
chr4 (169-209)||(39345013-39345053)
chr4 (165-209)||(45521612-45521656)
chr4 (169-209)||(47965737-47965777)
chr4 (174-218)||(54802688-54802732)
[»] chr7 (28 HSPs)
chr7 (168-218)||(3293138-3293188)
chr7 (172-221)||(7817650-7817699)
chr7 (168-209)||(33180743-33180784)
chr7 (170-221)||(3937131-3937182)
chr7 (170-221)||(11352983-11353034)
chr7 (170-209)||(16980296-16980335)
chr7 (170-221)||(33224834-33224885)
chr7 (171-218)||(42926152-42926199)
chr7 (170-221)||(44303925-44303976)
chr7 (162-221)||(47078260-47078319)
chr7 (171-209)||(21023150-21023188)
chr7 (171-221)||(31711946-31711996)
chr7 (167-209)||(37899319-37899361)
chr7 (167-209)||(46812938-46812980)
chr7 (172-221)||(3062343-3062392)
chr7 (169-221)||(25887592-25887644)
chr7 (170-209)||(13729725-13729764)
chr7 (170-221)||(41985110-41985161)
chr7 (179-221)||(36019437-36019479)
chr7 (167-209)||(37899246-37899288)
chr7 (171-209)||(39331985-39332023)
chr7 (171-201)||(39823809-39823839)
chr7 (172-209)||(19786112-19786149)
chr7 (168-209)||(28036741-28036782)
chr7 (168-221)||(35293125-35293178)
chr7 (168-209)||(44495130-44495171)
chr7 (173-221)||(237026-237074)
chr7 (166-218)||(45420073-45420125)
[»] chr1 (47 HSPs)
chr1 (170-221)||(44632539-44632590)
chr1 (171-221)||(18336158-18336208)
chr1 (170-209)||(1790507-1790546)
chr1 (170-221)||(8200086-8200137)
chr1 (170-221)||(33358168-33358219)
chr1 (170-221)||(48220153-48220204)
chr1 (166-221)||(49241514-49241569)
chr1 (171-221)||(16836125-16836175)
chr1 (171-221)||(32319318-32319368)
chr1 (172-221)||(45065911-45065960)
chr1 (174-221)||(36494478-36494525)
chr1 (170-221)||(50781579-50781630)
chr1 (170-221)||(50797790-50797841)
chr1 (171-221)||(47398461-47398511)
chr1 (172-218)||(50882122-50882168)
chr1 (168-209)||(7128115-7128156)
chr1 (168-209)||(8411751-8411792)
chr1 (168-209)||(19442503-19442544)
chr1 (172-221)||(19969571-19969620)
chr1 (172-209)||(33054121-33054158)
chr1 (169-209)||(26585912-26585952)
chr1 (167-207)||(34254386-34254426)
chr1 (170-221)||(1690445-1690496)
chr1 (170-221)||(27687529-27687580)
chr1 (171-221)||(36673740-36673791)
chr1 (170-209)||(37588708-37588747)
chr1 (170-221)||(40596064-40596115)
chr1 (170-209)||(46082154-46082193)
chr1 (168-207)||(48624881-48624920)
chr1 (171-209)||(756856-756894)
chr1 (167-209)||(1852984-1853026)
chr1 (171-209)||(3603111-3603149)
chr1 (171-209)||(4470347-4470385)
chr1 (171-201)||(16986938-16986968)
chr1 (171-221)||(34818054-34818104)
chr1 (171-209)||(35136844-35136882)
chr1 (171-209)||(36577445-36577483)
chr1 (171-221)||(41507204-41507254)
chr1 (171-209)||(44789176-44789214)
chr1 (168-209)||(2854993-2855034)
chr1 (168-217)||(4857919-4857968)
chr1 (171-220)||(6143695-6143744)
chr1 (172-209)||(30658881-30658918)
chr1 (169-209)||(30467559-30467599)
chr1 (169-209)||(33024604-33024644)
chr1 (169-209)||(34040533-34040573)
chr1 (169-209)||(43893255-43893295)
[»] chr5 (22 HSPs)
chr5 (171-219)||(42267357-42267405)
chr5 (170-221)||(15953054-15953105)
chr5 (174-221)||(1839354-1839401)
chr5 (170-221)||(9226312-9226363)
chr5 (170-220)||(2224801-2224851)
chr5 (171-209)||(21064259-21064297)
chr5 (164-209)||(8267853-8267898)
chr5 (169-209)||(8920076-8920116)
chr5 (169-209)||(22402659-22402699)
chr5 (169-209)||(30640788-30640828)
chr5 (170-221)||(3640206-3640257)
chr5 (170-209)||(9977118-9977157)
chr5 (170-209)||(17402955-17402994)
chr5 (170-209)||(23126376-23126415)
chr5 (170-221)||(34270338-34270389)
chr5 (171-209)||(4430969-4431007)
chr5 (171-209)||(9933500-9933538)
chr5 (170-204)||(37700459-37700493)
chr5 (170-220)||(42509616-42509666)
chr5 (168-221)||(6865797-6865850)
chr5 (167-207)||(14324003-14324043)
chr5 (177-221)||(31284404-31284448)
[»] chr2 (32 HSPs)
chr2 (169-221)||(42678759-42678811)
chr2 (170-221)||(6646834-6646885)
chr2 (170-220)||(3012856-3012906)
chr2 (171-221)||(42866762-42866812)
chr2 (169-221)||(26277105-26277157)
chr2 (170-221)||(2971824-2971875)
chr2 (174-221)||(32972916-32972963)
chr2 (174-212)||(4299556-4299594)
chr2 (171-209)||(20911801-20911839)
chr2 (164-209)||(37257442-37257487)
chr2 (168-221)||(37966364-37966417)
chr2 (172-208)||(1836014-1836050)
chr2 (169-221)||(22353185-22353237)
chr2 (169-209)||(35589420-35589460)
chr2 (169-209)||(39449150-39449190)
chr2 (170-209)||(670500-670539)
chr2 (170-221)||(10711735-10711786)
chr2 (171-214)||(19316593-19316636)
chr2 (170-209)||(28679315-28679354)
chr2 (170-209)||(30977888-30977927)
chr2 (170-209)||(36802895-36802934)
chr2 (170-221)||(40937073-40937124)
chr2 (174-221)||(42372494-42372541)
chr2 (170-209)||(44254598-44254637)
chr2 (159-221)||(23352914-23352976)
chr2 (171-209)||(29051686-29051724)
chr2 (168-221)||(285479-285532)
chr2 (168-221)||(15141470-15141523)
chr2 (171-207)||(4753160-4753196)
chr2 (169-209)||(12498669-12498709)
chr2 (173-209)||(14233752-14233788)
chr2 (169-209)||(18176938-18176978)
[»] chr8 (42 HSPs)
chr8 (170-221)||(30439515-30439566)
chr8 (170-221)||(37657000-37657051)
chr8 (169-218)||(42569741-42569790)
chr8 (171-219)||(35356179-35356227)
chr8 (174-218)||(42885990-42886034)
chr8 (170-221)||(20174686-20174737)
chr8 (170-221)||(20219413-20219464)
chr8 (170-209)||(29440555-29440594)
chr8 (158-221)||(32954839-32954902)
chr8 (170-221)||(41541868-41541919)
chr8 (167-209)||(3946236-3946278)
chr8 (171-221)||(6968242-6968292)
chr8 (171-209)||(7592849-7592887)
chr8 (171-221)||(22706250-22706300)
chr8 (168-209)||(17775462-17775503)
chr8 (169-206)||(36531593-36531630)
chr8 (169-221)||(7586171-7586223)
chr8 (169-209)||(16966783-16966823)
chr8 (168-208)||(32843974-32844014)
chr8 (174-221)||(14710903-14710950)
chr8 (174-221)||(28646686-28646733)
chr8 (174-221)||(28651270-28651317)
chr8 (170-221)||(40413359-40413410)
chr8 (170-209)||(41600308-41600347)
chr8 (171-209)||(1633923-1633961)
chr8 (171-209)||(14707377-14707415)
chr8 (171-209)||(16872189-16872227)
chr8 (171-209)||(29991412-29991450)
chr8 (171-209)||(34718115-34718153)
chr8 (167-217)||(44607697-44607747)
chr8 (171-209)||(45529279-45529317)
chr8 (168-209)||(9549232-9549273)
chr8 (172-209)||(34591263-34591300)
chr8 (172-221)||(39211054-39211103)
chr8 (168-209)||(42443101-42443142)
chr8 (161-209)||(4671981-4672029)
chr8 (169-221)||(7010683-7010735)
chr8 (169-201)||(8645163-8645195)
chr8 (169-209)||(30136048-30136088)
chr8 (169-209)||(36064028-36064068)
chr8 (165-221)||(37392138-37392194)
chr8 (169-221)||(45405829-45405881)
[»] chr6 (19 HSPs)
chr6 (170-221)||(28041823-28041874)
chr6 (170-221)||(28748123-28748174)
chr6 (171-209)||(754471-754509)
chr6 (159-201)||(3198948-3198990)
chr6 (169-209)||(30152563-30152603)
chr6 (170-221)||(2060643-2060694)
chr6 (170-221)||(5028275-5028326)
chr6 (170-209)||(5327625-5327664)
chr6 (170-209)||(15318221-15318260)
chr6 (170-209)||(24842367-24842406)
chr6 (170-209)||(33421759-33421798)
chr6 (167-209)||(4820247-4820289)
chr6 (167-209)||(20822901-20822943)
chr6 (171-208)||(7611495-7611532)
chr6 (169-209)||(3610994-3611034)
chr6 (171-207)||(6531218-6531254)
chr6 (170-210)||(15722535-15722575)
chr6 (169-209)||(18141334-18141374)
chr6 (169-209)||(30036827-30036867)
[»] chr3 (33 HSPs)
chr3 (170-221)||(49761318-49761369)
chr3 (170-219)||(1765403-1765452)
chr3 (169-209)||(30909027-30909067)
chr3 (170-221)||(3281725-3281776)
chr3 (174-221)||(24645371-24645418)
chr3 (170-221)||(26672411-26672461)
chr3 (170-221)||(43169763-43169814)
chr3 (171-221)||(9753230-9753280)
chr3 (171-217)||(11234203-11234249)
chr3 (171-209)||(37927238-37927276)
chr3 (171-221)||(39907555-39907605)
chr3 (171-221)||(48893354-48893404)
chr3 (168-221)||(21005185-21005238)
chr3 (168-221)||(47683798-47683851)
chr3 (168-209)||(50207003-50207044)
chr3 (169-209)||(44677517-44677557)
chr3 (169-221)||(54195349-54195401)
chr3 (170-209)||(10207006-10207045)
chr3 (170-209)||(26996315-26996354)
chr3 (170-221)||(28700471-28700522)
chr3 (170-209)||(49983384-49983423)
chr3 (170-221)||(51465923-51465974)
chr3 (170-209)||(54773787-54773826)
chr3 (171-209)||(24482996-24483034)
chr3 (171-209)||(30567993-30568031)
chr3 (171-209)||(49363284-49363322)
chr3 (170-207)||(6999168-6999205)
chr3 (168-209)||(8821627-8821668)
chr3 (170-207)||(21196123-21196160)
chr3 (167-196)||(32759945-32759974)
chr3 (168-201)||(42683824-42683857)
chr3 (169-221)||(28430740-28430792)
chr3 (171-203)||(46574150-46574182)
[»] scaffold0100 (1 HSPs)
scaffold0100 (170-220)||(44785-44835)
[»] scaffold0321 (1 HSPs)
scaffold0321 (169-209)||(19634-19674)
[»] scaffold0221 (1 HSPs)
scaffold0221 (170-209)||(8213-8252)
[»] scaffold0034 (1 HSPs)
scaffold0034 (170-209)||(22577-22616)
[»] scaffold0136 (1 HSPs)
scaffold0136 (168-209)||(38422-38463)
[»] scaffold0054 (1 HSPs)
scaffold0054 (161-221)||(31610-31670)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 46406215 - 46406007
Alignment:
Q  1 aatagttttactatgtttagcaggtcctcagacacttattaatgnnnnnnnnnnnnnnaatagaaaaaataacgcataattattgaaaactcacacataa 100  Q
    |||||||||||||||||||||| || ||||||||||||||||||              |||||| ||||| || ||||||||||||||||||||||||||    
T  46406215 aatagttttactatgtttagcaagttctcagacacttattaatgtttttattttttttaatagacaaaatgacacataattattgaaaactcacacataa 46406116  T
Q  101 gtgaatgagttggggttcaacatttttgccacttgagctataacttgtgaacttttcctattttctattagagaaatgatatttgaacattcatttggtg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46406115 gtgaatgagttggggttcaacatttttgccacttgagctataacttgtgaacttttcctattttctattagagaaatgatatttgaatattcatttggtg 46406016  T
Q  201 acaactttt 209  Q
    |||||||||    
T  46406015 acaactttt 46406007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 4949517 - 4949568
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4949517 agagaaatgatatttgaacattcatttggtgacaactttctctctcatactc 4949568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 31657654 - 31657708
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  31657654 attagagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 31657708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 28657501 - 28657450
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  28657501 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 28657450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 43769722 - 43769773
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  43769722 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 43769773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 17475321 - 17475361
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaacttttt 210  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  17475321 agagaaatgatatttgaacattcatttggtgataacttttt 17475361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 22072263 - 22072310
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||    
T  22072263 aaatgatatttgaacaatcattttgttacaactttttctctcatactc 22072310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 17683236 - 17683286
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||||||  |||||||||| ||||| ||||||    
T  17683236 gagaaatgatatttgaacattcattttatgacaactttctctcttatactc 17683286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 17683359 - 17683409
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||| |||||  |||||||||| ||||||||||||    
T  17683359 gagaaatgatatttgaacatccattttatgacaactttatctctcatactc 17683409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 39312675 - 39312625
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  39312675 gagaaatgatatttgaacatctatttagtgacaactttctctctcatactc 39312625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 41082314 - 41082356
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||| ||||||||| |||||||    
T  41082314 attagagaaatgatatttgaacatttatttggtgataactttt 41082356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 53647487 - 53647445
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaacttttt 210  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  53647487 ttagagaaatgatatttgaacattcatttgatgacaatttttt 53647445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 26718377 - 26718430
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  26718377 ttagagaaatgatatttgaacatccattttatgacaattttctctctcatactc 26718430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 26731005 - 26731058
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  26731005 ttagagaaatgatatttgaacatccattttatgacaattttctctctcatactc 26731058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 30079844 - 30079884
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  30079844 tagagaaatgatatttgaacatccatttagtgacaactttt 30079884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 13086021 - 13086060
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  13086021 agagaaatgatatttgatcattcattttgtgacaactttt 13086060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 14010190 - 14010151
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  14010190 agagaaatgatatttgaacatccattttgtgacaactttt 14010151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 22819648 - 22819687
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  22819648 agagaaatgatatttgaacatccattttgtgacaactttt 22819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 23822317 - 23822278
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  23822317 agagaaatgatatttgaacattcatttaatgacaactttt 23822278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 35500860 - 35500809
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||| |||||||| ||||  |||||||||| ||||||||||||    
T  35500860 agagaaatgatatatgaacatttattttttgacaactttctctctcatactc 35500809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 37065999 - 37066050
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| ||  ||||||||| |||||||||| ||||||||    
T  37065999 agagaaatgatatttgaatatctatttggtgataactttttctttcatactc 37066050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 54036590 - 54036539
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| |||  ||||| ||||||||||| ||||||||||||    
T  54036590 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactc 54036539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 54669655 - 54669616
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  54669655 agagaaatgatatttcaacatccatttggtgacaactttt 54669616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 31076052 - 31076090
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactt 207  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  31076052 tagagaaatgatatttgaacatccatttggtaacaactt 31076090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 33860647 - 33860685
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  33860647 gagaaatgatatttgaacatccatttggtgacaattttt 33860685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 47099022 - 47099060
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  47099022 gagaaatgatatttgaatattcattttgtgacaactttt 47099060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 51741357 - 51741395
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  51741357 gagaaatgatatttgaacatttatttagtgacaactttt 51741395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 51887663 - 51887701
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  51887663 gagaaatgatatttgaacatccattttgtgacaactttt 51887701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 624386 - 624345
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  624386 ttagagaaatgatatttgaacatctatttagtgacaactttt 624345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 2401611 - 2401648
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  2401611 agaaatgatatttgaacatccattttgtgacaactttt 2401648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 5386385 - 5386434
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||  |||||  |||||||||| ||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactc 5386434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 9362752 - 9362711
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  9362752 ttagagaaatgatatttgaacatccatttaatgacaactttt 9362711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 12799727 - 12799768
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttct 212  Q
    |||||||||||||| || |||||||| |||||||||||||||    
T  12799727 gagaaatgatatttaaatattcatttagtgacaactttttct 12799768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 14451393 - 14451430
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaacttt 208  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  14451393 gagaaatgatatttgaacatccatttagtgacaacttt 14451430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 9162065 - 9162105
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaacttttt 210  Q
    |||||||||||||||| ||| |||||| |||||||||||||    
T  9162065 agagaaatgatatttgtacaatcattttgtgacaacttttt 9162105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 14527642 - 14527682
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||| ||||||||||||||||| ||||| ||||||||||||    
T  14527642 tagaaaaatgatatttgaacatccattttgtgacaactttt 14527682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 32621636 - 32621688
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| |||  ||||| ||||||||||| ||||| ||||||    
T  32621636 tagagaaatgatatttgcacaaccattttgtgacaactttctctctaatactc 32621688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 36111469 - 36111429
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| || |||||||||    
T  36111469 tagagaaatgatatttgaacatccatttagtaacaactttt 36111429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 39345053 - 39345013
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||| ||||    
T  39345053 tagagaaatgatatttgaacatccattttgtgacaattttt 39345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 45521656 - 45521612
Alignment:
Q  165 ctattagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| |||| |||||  |||||||||||    
T  45521656 ctattagagaaatgatatttgtacatccattttatgacaactttt 45521612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 47965737 - 47965777
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  47965737 tagagaaataatatttgaacattcatttagttacaactttt 47965777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 54802732 - 54802688
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcata 218  Q
    ||||||||||||||||| ||||| ||||||||||| |||| ||||    
T  54802732 aaatgatatttgaacatccattttgtgacaactttctctcacata 54802688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 5e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 3293138 - 3293188
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcata 218  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3293138 ttagagaaatgatatttgaacattcatttggtgacaactttctctctcata 3293188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 7817650 - 7817699
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  7817650 agaaatgatatttgaacatccattttgtgacaactttctctctcatactc 7817699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 33180784 - 33180743
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  33180784 ttagagaaatgatatttgaacattcattttgtgacaactttt 33180743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 3937182 - 3937131
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  3937182 agagaaatgatatttgaacatctattttgtgacaactttctctctcatactc 3937131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 11353034 - 11352983
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  11353034 agagaaatgatatttgaacatcaattttgtgacaactttctctctcatactc 11352983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 16980296 - 16980335
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  16980296 agagaaatgatatttgaacattcattttgtgacaactttt 16980335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 33224834 - 33224885
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  33224834 agagaaatgatatttgaacatctattttgtgacaactttctctctcatactc 33224885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 42926152 - 42926199
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcata 218  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  42926152 gagaaatgatatttgaatatttatttggtgacaactttctctctcata 42926199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 44303925 - 44303976
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  44303925 agagtaatcatatttgaacatccatttggtgacaactttttatctcatactc 44303976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 47078319 - 47078260
Alignment:
Q  162 tttctattagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||| ||||||||||||||||||||||||  ||||  |||||||||| ||||||||||||    
T  47078319 tttcaattagagaaatgatatttgaacatctattttatgacaactttctctctcatactc 47078260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 21023188 - 21023150
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  21023188 gagaaatgatatttgaacattcatttagtgacaactttt 21023150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 31711996 - 31711946
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| |||||||| ||||||||||| | ||||||||||    
T  31711996 gagaaatgatatttgaatattcattttgtgacaactttctttctcatactc 31711946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 37899319 - 37899361
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  37899319 attagagaaatgatatttgaacatccattttgtgacaactttt 37899361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 46812980 - 46812938
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  46812980 attaaagaaatgatatttgaacattcattttgtgacaactttt 46812938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 3062343 - 3062392
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  3062343 agaaatgatatttgaacatccattttgtgacaactttctctcttatactc 3062392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 25887592 - 25887644
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| |||| || || ||||||||||| ||||||||||||    
T  25887592 tagagaaatgatatttgtacatccactttgtgacaactttctctctcatactc 25887644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 13729725 - 13729764
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  13729725 agagaaatgatatttgaacatccattttgtgacaactttt 13729764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 41985161 - 41985110
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| ||| ||| || ||||||||||| ||||||||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaactttctctctcatactc 41985110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 36019437 - 36019479
Alignment:
Q  179 atatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||  ||||||||| ||||||||||||    
T  36019437 atatttgaacattcatttgacgacaactttctctctcatactc 36019479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 37899288 - 37899246
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||    
T  37899288 attagagaaatgatatttgaacatccattttgtgacaattttt 37899246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 39331985 - 39332023
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  39331985 gagaaatgatatttgaacatccatttagtgacaactttt 39332023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 201
Target Start/End: Original strand, 39823809 - 39823839
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtga 201  Q
    |||||||||||||||||||||||||||||||    
T  39823809 gagaaatgatatttgaacattcatttggtga 39823839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19786149 - 19786112
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  19786149 agaaatgatatttgaacatccatttagtgacaactttt 19786112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 28036741 - 28036782
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||| |||||||||||||||| | ||||||||||||    
T  28036741 ttagagaaataatatttgaacattcatgttgtgacaactttt 28036782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 35293125 - 35293178
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||| |||||  |||||||||| | ||| ||||||    
T  35293125 ttagagaaatgatatttgaacatccattttttgacaactttctttcttatactc 35293178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 44495171 - 44495130
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| || |||||| |||||||||||    
T  44495171 ttagagaaatgatatttgaatatccatttgatgacaactttt 44495130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 237026 - 237074
Alignment:
Q  173 gaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||| ||| ||| || ||||||||||| ||||||||||||    
T  237026 gaaatgatatttgtacaatcaatttgtgacaactttatctctcatactc 237074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 45420125 - 45420073
Alignment:
Q  166 tattagagaaatgatatttgaacattcatttggtgacaactttttctctcata 218  Q
    ||||||||||||||||||||||||   ||||  |||||||||| |||||||||    
T  45420125 tattagagaaatgatatttgaacaactattttttgacaactttctctctcata 45420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 44632539 - 44632590
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  44632539 agagaaatgatatttgaacatccatttggtgacaactttctctctcatactc 44632590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 18336158 - 18336208
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18336158 gagaaatgatatttgaacattcattttgtgacaactttctctctcatactc 18336208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 1790507 - 1790546
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1790507 agagaaatgatatttgaacattcatttggtgacaactttt 1790546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 8200086 - 8200137
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  8200086 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 8200137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 33358219 - 33358168
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  33358219 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 33358168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 48220204 - 48220153
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  48220204 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 48220153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 49241569 - 49241514
Alignment:
Q  166 tattagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  49241569 tattagagaaatgatatttgaacatccactttgtgacaactttctctctcatactc 49241514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 16836175 - 16836125
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttttctctcatactc 16836125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 32319368 - 32319318
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  32319368 gagaaatgatatttaaacatccatttggtgacaactttctctctcatactc 32319318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 45065960 - 45065911
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  45065960 agaaatgatatttgaacatccattttgtgacaactttctctctcatactc 45065911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 36494478 - 36494525
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  36494478 aaatgatatttgaacatccatttagtgacaactttctctctcatactc 36494525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 50781630 - 50781579
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| |||||  |||||||||| ||||||||||||    
T  50781630 agagaaatgatatttgaacatccattttatgacaactttctctctcatactc 50781579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 50797790 - 50797841
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| ||| |||||| ||||||||||| ||||||||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaactttctctctcatactc 50797841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 47398511 - 47398461
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||||||  |||||| ||| ||||||||||||    
T  47398511 gagaaatgatatttgaacattcattttttgacaattttctctctcatactc 47398461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 50882168 - 50882122
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttttctctcata 218  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  50882168 agaaatgatatttgaacattcattttgtgacaattttctctctcata 50882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 7128115 - 7128156
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  7128115 ttagagaaatgatatttgaacatccatttagtgacaactttt 7128156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 8411792 - 8411751
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  8411792 ttagagaaatgatatttgaacatccatttagtgacaactttt 8411751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 19442503 - 19442544
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  19442503 ttagagaaatgatatttgaacaatcattttgtgacaactttt 19442544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 19969620 - 19969571
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||| |||||  |||||||||| ||||||||||||    
T  19969620 agaaatgatatttgaacatccattttatgacaactttctctctcatactc 19969571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 33054158 - 33054121
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  33054158 agaaatgatatttgaacattcattttgtgacaactttt 33054121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 26585952 - 26585912
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  26585952 tagagaaatgatatttgaacatccatttagtgacaactttt 26585912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 34254426 - 34254386
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactt 207  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  34254426 attagagaaatgatatttgaacattcattttatgacaactt 34254386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 1690445 - 1690496
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||| ||||||| |||  ||||| ||||||||||||||||||||||||    
T  1690445 agagaaataatatttgtacaaccattttgtgacaactttttctctcatactc 1690496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 27687580 - 27687529
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| |||  ||||| ||||||||||| ||||||||||||    
T  27687580 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactc 27687529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 36673791 - 36673740
Alignment:
Q  171 gagaaatgatatttgaa-cattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||| || ||| ||||||||||||||||| ||||||||||||    
T  36673791 gagaaatgatatttaaaacatccatttggtgacaactttctctctcatactc 36673740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 37588747 - 37588708
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  37588747 agagaaatgatatttgaacatttattttgtgacaactttt 37588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 40596115 - 40596064
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| |||  ||||| ||||||||||| ||||||||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactc 40596064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 46082193 - 46082154
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  46082193 agagaaatgatatttgaacatccatttagtgacaactttt 46082154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 48624881 - 48624920
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactt 207  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  48624881 ttagagaaatgatatttgaacatccattttgtgacaactt 48624920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 756856 - 756894
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  756856 gagaaatgatatttgaacatccatttagtgacaactttt 756894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 1853026 - 1852984
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||  |||| ||||||||||||    
T  1853026 attagagaaatgatatttgaacatctatttagtgacaactttt 1852984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 3603111 - 3603149
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  3603111 gagaaatgatatttgaacatccatttagtgacaactttt 3603149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 4470385 - 4470347
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  4470385 gagaaatgatatttgaacatccattttgtgacaactttt 4470347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 201
Target Start/End: Original strand, 16986938 - 16986968
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtga 201  Q
    |||||||||||||||||||||||||||||||    
T  16986938 gagaaatgatatttgaacattcatttggtga 16986968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 34818104 - 34818054
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||| ||||||||||  | |||||||| ||||||||||||    
T  34818104 gagaaatgatatttgtacattcatttcctaacaactttctctctcatactc 34818054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 35136844 - 35136882
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  35136844 gagaaatgatatttgaacatccattttgtgacaactttt 35136882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 36577483 - 36577445
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  36577483 gagaaatgatatttgaacatccattttgtgacaactttt 36577445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 41507254 - 41507204
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||| |||  ||||| ||||||||||| ||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactc 41507204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 44789214 - 44789176
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  44789214 gagaaatgatatttgaacatccattttgtgacaactttt 44789176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 2855034 - 2854993
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||| ||||||||||  |||||||||||    
T  2855034 ttagagaaatgatatttgtacattcattttatgacaactttt 2854993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 4857919 - 4857968
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcat 217  Q
    |||||||||||||||||||||| ||| ||  |||||||||| ||||||||    
T  4857919 ttagagaaatgatatttgaacaatcactttttgacaactttctctctcat 4857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 6143695 - 6143744
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatact 220  Q
    |||||||||| ||||||||| || || ||||||||||| |||||||||||    
T  6143695 gagaaatgatgtttgaacatccactttgtgacaactttctctctcatact 6143744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 30658918 - 30658881
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  30658918 agaaatgatatttgaacatccattttgtgacaactttt 30658881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 30467599 - 30467559
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||||  |||||||||||    
T  30467599 tagagaaatgatatttgaacagtcattttttgacaactttt 30467559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 33024644 - 33024604
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  33024644 tagagaaatgatatttgaacatctatttagtgacaactttt 33024604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 34040573 - 34040533
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| |||| |||||||    
T  34040573 tagagaaatgatatttgaacatccattttgtgataactttt 34040533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 43893255 - 43893295
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| || |||||||||    
T  43893255 tagagaaatgatatttgaacatccattttgtcacaactttt 43893295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 42267357 - 42267405
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatac 219  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  42267357 gagaaatgatatttgatcattcatttagtgacaactttttctctcatac 42267405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 15953105 - 15953054
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  15953105 agagaaatgatatttgaacatctattttgtgacaactttttctctcatactc 15953054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 1839401 - 1839354
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  1839401 aaatgatatttgaacatccattttgtgacaactttctctctcatactc 1839354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 9226312 - 9226363
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| |||||  |||||||||| ||||||||||||    
T  9226312 agagaaatgatatttgaacatccatttaatgacaactttctctctcatactc 9226363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 2224801 - 2224851
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatact 220  Q
    |||||||||||||||||||||  |||||||||||| ||| |||||||||||    
T  2224801 agagaaatgatatttgaacatctatttggtgacaattttatctctcatact 2224851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 21064297 - 21064259
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  21064297 gagaaatgatatttgaacattcatttagtgacaactttt 21064259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 8267898 - 8267853
Alignment:
Q  164 tctattagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  8267898 tctattagagaaatgatatttgaacatccatttagtgacaattttt 8267853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 8920076 - 8920116
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  8920076 tagagaaatgatatttgaacatccattttgtgacaactttt 8920116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 22402699 - 22402659
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  22402699 tagagaaatgatatttgaacatttattttgtgacaactttt 22402659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 30640788 - 30640828
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  30640788 tagagaaatgatatttgaacatccattttgtgacaactttt 30640828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 3640257 - 3640206
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||  |||| | ||||||||| ||||||||||||    
T  3640257 agagaaatgatatttgaacatctattttgagacaactttctctctcatactc 3640206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 9977118 - 9977157
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  9977118 agagaaatgatatttgaacatccatttagtgacaactttt 9977157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 17402994 - 17402955
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  17402994 agagaaatgatatttgaacatccatttggtgacaattttt 17402955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 23126415 - 23126376
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  23126415 agagaaatgatatttgaacatccatttagtgacaactttt 23126376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 34270338 - 34270389
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| || || ||||||| ||| ||||||||||||    
T  34270338 agagaaatgatatttgaacatccactttgtgacaattttctctctcatactc 34270389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 4431007 - 4430969
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  4431007 gagaaatgatatttgaacatccatttagtgacaactttt 4430969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 9933500 - 9933538
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  9933500 gagaaatgatatttgaacattcattttatgacaactttt 9933538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 37700459 - 37700493
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaa 204  Q
    ||||||||||||||||||||| |||||||||||||    
T  37700459 agagaaatgatatttgaacatccatttggtgacaa 37700493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 42509616 - 42509666
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatact 220  Q
    ||||||||||||||| |||| ||||||  |||||| |||||||||||||||    
T  42509616 agagaaatgatattttaacaatcattttatgacaaatttttctctcatact 42509666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 6865850 - 6865797
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| |||  || || ||||||||||| ||||||||||||    
T  6865850 ttagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactc 6865797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 14324043 - 14324003
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactt 207  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  14324043 attagagaaatgatatttgcacatccattttgtgacaactt 14324003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 31284448 - 31284404
Alignment:
Q  177 tgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||| |||| ||||| ||||||||||| ||||||||||||    
T  31284448 tgatatttgtacatccattttgtgacaactttctctctcatactc 31284404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 42678759 - 42678811
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  42678759 tagagaaatgatatttgaacatccatttagtgacaactttctctctcatactc 42678811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 6646834 - 6646885
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  6646834 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 6646885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 3012906 - 3012856
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatact 220  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  3012906 agagaaatgatatttgaacatccattttgtgacaactttctctctcatact 3012856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 42866762 - 42866812
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||||    
T  42866762 gagaaatgatatttgaacgtccattttgtgacaactttttctctcatactc 42866812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 26277105 - 26277157
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  26277105 tagagaaatgatatttgaacatccatttagtgacaactttctctcttatactc 26277157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 2971875 - 2971824
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||    
T  2971875 agagaaaagatatttgaacatccattttgtgacaactttctctctcatactc 2971824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 32972963 - 32972916
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  32972963 aaatgatatttgaacatccattttgtgacaactttctctctcatactc 32972916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 4299594 - 4299556
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttct 212  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  4299594 aaatgatatttgaacattcattttgtgacaactttttct 4299556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 20911801 - 20911839
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  20911801 gagaaatgatatttgaacattcatttggtaacaactttt 20911839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 37257442 - 37257487
Alignment:
Q  164 tctattagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  37257442 tctatttgagaaatgatatttgaacatccatttagtgacaactttt 37257487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 37966364 - 37966417
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| |||  || || ||||||||||||||||||||||||    
T  37966364 ttagagaaatgatatttgtacaaccaatttgtgacaactttttctctcatactc 37966417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 1836014 - 1836050
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaacttt 208  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1836014 agaaatgatatttgaacattcattttgtgacaacttt 1836050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22353237 - 22353185
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| ||| |||||| ||||||||||| | ||||||||||    
T  22353237 tagagaaatgatatttgtacaatcattttgtgacaactttctttctcatactc 22353185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 35589460 - 35589420
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  35589460 tagagaaatgatatttgaacatccattttgtgacaactttt 35589420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 39449190 - 39449150
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  39449190 tagagaaatgatatttgaacatccattttgtgacaactttt 39449150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 670539 - 670500
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  670539 agagaaatgatatttgaacatccatttagtgacaactttt 670500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 10711735 - 10711786
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||  |||| ||||||| ||| ||||||||||||    
T  10711735 agagaaatgatatttgaacatctattttgtgacaattttctctctcatactc 10711786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 19316636 - 19316593
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctct 214  Q
    ||||||||||||||||| | |||||| |||||||||||||||||    
T  19316636 gagaaatgatatttgaataatcattttgtgacaactttttctct 19316593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 28679315 - 28679354
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  28679315 agagaaataatatttgaacatccatttggtgacaactttt 28679354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 30977888 - 30977927
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  30977888 agagaaatgatatttgaacatccattttgtgacaactttt 30977927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 36802895 - 36802934
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  36802895 agagaaatgatatttgaacatccattttgtgacaactttt 36802934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 40937124 - 40937073
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||| |||||||||| ||||| |||| |||||| ||||||||||||    
T  40937124 agagaaatgacatttgaacatccattttgtgataactttctctctcatactc 40937073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 42372494 - 42372541
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||  |||| ||||||||||| ||||||||||||    
T  42372494 aaatgatatttgaacatctatttagtgacaactttctctctcatactc 42372541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 44254598 - 44254637
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  44254598 agagaaatgatatttgaacattcattctgtgacaactttt 44254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 23352976 - 23352914
Alignment:
Q  159 tattttctattagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||| ||||  |||||||||| |||||||  ||||| ||||||||||| ||||||||||||    
T  23352976 tattttttattttagaaatgatacttgaacagccattttgtgacaactttctctctcatactc 23352914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 29051724 - 29051686
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  29051724 gagaaatgatatttgaacatccatttagtgacaactttt 29051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 285532 - 285479
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| |||||||||| |  |||||||| |||| |||||||    
T  285532 ttagagaaatgatatttgtacattcattttggaacaactttctctcgcatactc 285479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 15141470 - 15141523
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| ||||  ||||  |||||||||| ||||||||||||    
T  15141470 ttagagaaatgatatttgtacatctattttatgacaactttctctctcatactc 15141523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 4753160 - 4753196
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactt 207  Q
    |||||||||||||||||||| |||||||||| |||||    
T  4753160 gagaaatgatatttgaacatccatttggtgataactt 4753196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 12498709 - 12498669
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| |||||||| |||| ||||    
T  12498709 tagagaaatgatatttgaacatccatttggtaacaattttt 12498669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 14233788 - 14233752
Alignment:
Q  173 gaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  14233788 gaaatgatatttgaacatccattttgtgacaactttt 14233752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 18176938 - 18176978
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  18176938 tagagaaatgatatttgaacatctatttagtgacaactttt 18176978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 30439566 - 30439515
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  30439566 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 30439515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 37657000 - 37657051
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  37657000 agagaaatgatatttgaacatccatttagtgacaactttctctctcatactc 37657051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 42569790 - 42569741
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcata 218  Q
    ||||||||||||||||||||||||||||  |||||||||| |||||||||    
T  42569790 tagagaaatgatatttgaacattcattttatgacaactttctctctcata 42569741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 35356227 - 35356179
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatac 219  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  35356227 gagaaatgatatttgaacattcattttgtgataactttctctctcatac 35356179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 42885990 - 42886034
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcata 218  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||    
T  42885990 aaatgatatttgaacatccatttggtgacaactttctctctcata 42886034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 20174686 - 20174737
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  20174686 agagtaatcatatttgaacatccatttggtgacaactttttatctcatactc 20174737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 20219413 - 20219464
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  20219413 agagtaatcatatttgaacatccatttggtgacaactttttatctcatactc 20219464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 29440594 - 29440555
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  29440594 agagaaatgatatttgaacattcatttggtgataactttt 29440555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 32954839 - 32954902
Alignment:
Q  158 ctattttctattagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||  || ||||||||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  32954839 ctattttctgataaagaaatgatatttgaacatccattttgtgacaactttctctctgatactc 32954902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 41541868 - 41541919
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  41541868 agagaaatgatatttgaacatccattttgtgacaactttctctcttatactc 41541919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 3946236 - 3946278
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  3946236 attagagaaatgatatttgaacatccattttgtgacaactttt 3946278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 6968292 - 6968242
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||  || ||||||||||||| ||||||||||||    
T  6968292 gagaaatgatatttgaacatcaatctggtgacaactttctctctcatactc 6968242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 7592849 - 7592887
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  7592849 gagaaatgatatttgaacattcatttagtgacaactttt 7592887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 22706300 - 22706250
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  22706300 gagaaatgatatttgaatatccatttagtgacaactttatctctcatactc 22706250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 17775503 - 17775462
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  17775503 ttagagaaatgatatttgaacaatcattttgtgacaactttt 17775462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 36531593 - 36531630
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaact 206  Q
    |||||||||||||||||||||| |||||||||||||||    
T  36531593 tagagaaatgatatttgaacatccatttggtgacaact 36531630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 7586223 - 7586171
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||  |||||||||||||||| | | ||||||||    
T  7586223 tagagaaatgatatttgaacatctatttggtgacaactttctttttcatactc 7586171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 16966783 - 16966823
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  16966783 tagagaaatgatatttgaacatccatttagtgacaactttt 16966823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 32844014 - 32843974
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaacttt 208  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  32844014 ttagagaaattatatttgaacattcatttagtgacaacttt 32843974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 14710950 - 14710903
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||| ||| |||||| ||||||||||| ||||||||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaactttctctctcatactc 14710903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 28646686 - 28646733
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||||||    
T  28646686 aaatgatatttgaacatctatttgatgacaactttctctctcatactc 28646733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 28651270 - 28651317
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||  ||||| |||||||||| ||||||||||||    
T  28651270 aaatgatatttgaacatctatttgatgacaactttctctctcatactc 28651317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 40413410 - 40413359
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| ||| | |||| ||||||||||| ||||||||||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaactttctctctcatactc 40413359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 41600308 - 41600347
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  41600308 agagaaatgatatttgaacattcatttattgacaactttt 41600347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 1633961 - 1633923
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  1633961 gagaaatgatatttgaacatccatttagtgacaactttt 1633923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 14707415 - 14707377
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  14707415 gagaaatgatatttgaacattcattttttgacaactttt 14707377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 16872227 - 16872189
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  16872227 gagaaatgatatttgaacatccattttgtgacaactttt 16872189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 29991412 - 29991450
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  29991412 gagaaatgatatttgaacatccattttgtgacaactttt 29991450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 34718115 - 34718153
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  34718115 gagaaatgatatttgaacatccattttgtgacaactttt 34718153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 44607697 - 44607747
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttttctctcat 217  Q
    |||| |||||||||||||| |||  ||||||||||||||||| ||||||||    
T  44607697 attaaagaaatgatatttgtacaaccatttggtgacaactttctctctcat 44607747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 45529317 - 45529279
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  45529317 gagaaatgatatttgaacattcatttagtgacaattttt 45529279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 9549273 - 9549232
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||    
T  9549273 ttagaaaaatgatatttgaacatccattttgtgacaactttt 9549232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 34591263 - 34591300
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||| || |||||||||    
T  34591263 agaaatgatatttgaacattcatttagtcacaactttt 34591300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 39211054 - 39211103
Alignment:
Q  172 agaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||  |||||  |||||||||| ||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactc 39211103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 42443101 - 42443142
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||| ||| |||||| ||||||||||||    
T  42443101 ttagagaaatgatatttgtacaatcatttagtgacaactttt 42443142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 4671981 - 4672029
Alignment:
Q  161 ttttctattagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||| ||||||||||||  |||||  |||||||||||    
T  4671981 ttttctattagagaaacgatatttgaacaaccattttttgacaactttt 4672029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 7010683 - 7010735
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| ||| ||||||  |||||| ||| ||||||||||||    
T  7010683 tagagaaatgatatttgtacaatcattttttgacaattttctctctcatactc 7010735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 8645163 - 8645195
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtga 201  Q
    |||||||||||||||||||||| ||||||||||    
T  8645163 tagagaaatgatatttgaacatccatttggtga 8645195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 30136088 - 30136048
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||| ||||  |||||||||||    
T  30136088 tagagaaatgatatttgaacatttatttaatgacaactttt 30136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 36064028 - 36064068
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||| ||| |||||| ||||||||||||    
T  36064028 tagagaaatgatatttgtacaatcattttgtgacaactttt 36064068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 37392194 - 37392138
Alignment:
Q  165 ctattagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||| |||||||||||||||| |||  |||||  |||||||||| ||||||||||||    
T  37392194 ctataagagaaatgatatttgtacaaccattttttgacaactttctctctcatactc 37392138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 45405881 - 45405829
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| |||  ||||| |  |||||||||||||||||||||    
T  45405881 tagagaaatgatatttgtacaaccattttgatacaactttttctctcatactc 45405829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 28041874 - 28041823
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  28041874 agagaaatgatatttaaacatccatttggtaacaactttttctctcatactc 28041823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 28748123 - 28748174
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  28748123 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 28748174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 754509 - 754471
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  754509 gagaaatgatatttgaacattcattttgtgacaactttt 754471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 3198948 - 3198990
Alignment:
Q  159 tattttctattagagaaatgatatttgaacattcatttggtga 201  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  3198948 tattttattttagagaaatgatatttgaacattcatttggtga 3198990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 30152603 - 30152563
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  30152603 tagaaaaatgatatttgaacattcatttagtgacaactttt 30152563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 2060694 - 2060643
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| |  |||||  |||||||||||||||||||||||    
T  2060694 agagaaatgatatttgaataaccattttatgacaactttttctctcatactc 2060643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 5028326 - 5028275
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||| ||||| ||||| ||||||||||| ||||| ||||||    
T  5028326 agagaaatgatatttaaacatccattttgtgacaactttctctcttatactc 5028275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 5327664 - 5327625
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  5327664 agagaaatgatatttgaacatccatttagtgacaactttt 5327625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 15318260 - 15318221
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  15318260 agagaaatgatatttgaacatccattttgtgacaactttt 15318221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 24842367 - 24842406
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  24842367 agagaaatgatatttgaacattcatttaatgacaactttt 24842406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 33421759 - 33421798
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  33421759 agagaaatgatatttgaacatccattttgtgacaactttt 33421798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 4820247 - 4820289
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||| ||||| |||| |||||||    
T  4820247 attagagaaatgatatttgaacatccatttagtgataactttt 4820289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 20822943 - 20822901
Alignment:
Q  167 attagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||| |||||  |||||||||||    
T  20822943 attagagaaatgatatttgaacatccattttatgacaactttt 20822901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 7611495 - 7611532
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaacttt 208  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  7611495 gagaaatgatatttgaacaatcattttgtgacaacttt 7611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 3611034 - 3610994
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| |||| |||||||    
T  3611034 tagagaaatgatatttgaacatccatttagtgataactttt 3610994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 6531254 - 6531218
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactt 207  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  6531254 gagaaatgatatttgaacatccattttgtgacaactt 6531218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 15722575 - 15722535
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaacttttt 210  Q
    |||||||||||||||| ||| |||||| |||||||||||||    
T  15722575 agagaaatgatatttgtacaatcattttgtgacaacttttt 15722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 18141374 - 18141334
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||| |||||||||||  |||||||||||    
T  18141374 tagagaaatgatatttaaacattcattttatgacaactttt 18141334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 30036867 - 30036827
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  30036867 tagagaaatgatatttgaacatctatttagtgacaactttt 30036827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 49761318 - 49761369
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  49761318 agagaaatgatatttgaacatccattttgtgacaactttctctctcatactc 49761369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 1765403 - 1765452
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatac 219  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  1765403 agagaaatgatatttgtacattcattttgtgacaactttctctctcatac 1765452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 30909027 - 30909067
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  30909027 tagagaaatgatatttgaacattcatttagtgacaactttt 30909067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 3281776 - 3281725
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||| ||||||    
T  3281776 agagaaatgatatttgaacatttattttgtgacaactttctctcttatactc 3281725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 24645371 - 24645418
Alignment:
Q  174 aaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||    
T  24645371 aaatgatatttgaacatccattttatgacaactttttctctcatactc 24645418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 26672411 - 26672461
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  26672411 agagaaatgatatttgaacattcattttgtgacaac-ttctctctcatactc 26672461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 43169814 - 43169763
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||| |||  ||||| ||||||||||||||||||||||||    
T  43169814 agagaaatgatatttgtacaaccattttgtgacaactttttctctcatactc 43169763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 9753230 - 9753280
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||||||||||||    
T  9753230 gagaaatgatatttgaacaatcattttgtgacaattttatctctcatactc 9753280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 11234203 - 11234249
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcat 217  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||    
T  11234203 gagaaatgatatttgaacatccatttactgacaactttttctctcat 11234249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 37927276 - 37927238
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  37927276 gagaaatgatatttgaacatccatttggtgacaactttt 37927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 39907605 - 39907555
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  39907605 gagaaatgatatttgaacatttatttaatgataactttttctctcatactc 39907555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 48893354 - 48893404
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||| |||||||||||  |||||| ||||||||||||||||    
T  48893354 gagaaatgatatttaaacattcattttttgacaattttttctctcatactc 48893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 21005238 - 21005185
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||||  |||| ||||||||||| ||||| ||||||    
T  21005238 ttagagaaatgatatttgaacatctattttgtgacaactttctctcttatactc 21005185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 47683798 - 47683851
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||| |||  ||||| ||||||||||| ||||||||||||    
T  47683798 ttagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactc 47683851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 209
Target Start/End: Complemental strand, 50207044 - 50207003
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  50207044 ttagagaaatgatatttgaacatccattttgtgacaactttt 50207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 44677557 - 44677517
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  44677557 tagagaaatgatatttgaacatccatttagtgacaactttt 44677517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 54195349 - 54195401
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||| | ||||||    
T  54195349 tagagaaatgatatttgaacatccatttagtgacaactttctcttttatactc 54195401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 10207045 - 10207006
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  10207045 agagaaatgatatttgaacatccatttagtgacaactttt 10207006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 26996315 - 26996354
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  26996315 agagaaatgatatttgaacattcatttagtaacaactttt 26996354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 28700471 - 28700522
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||||||||||||||  |||||  |||||||||| ||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttttgacaactttatctctcatactc 28700522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 49983423 - 49983384
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  49983423 agagaaatgatatttgaacatccatttggttacaactttt 49983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 51465974 - 51465923
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||||||||||||||||||  |||| ||||| ||||| ||||||||||||    
T  51465974 agagaaatgatatttgaacatctattttgtgaccactttctctctcatactc 51465923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 54773826 - 54773787
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  54773826 agagaaatgatatttgaacatccatttagtgacaactttt 54773787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 24483034 - 24482996
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  24483034 gagaaatgatatttgaacatccattttgtgacaactttt 24482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 30568031 - 30567993
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  30568031 gagaaatgatatttgaacatttattttgtgacaactttt 30567993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 49363322 - 49363284
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  49363322 gagaaatgatatttgaacatccatttagtgacaactttt 49363284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 6999168 - 6999205
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactt 207  Q
    |||||||||||||||||||||||||||  |||||||||    
T  6999168 agagaaatgatatttgaacattcattttatgacaactt 6999205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 8821627 - 8821668
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||  |||| ||||||||||||    
T  8821627 ttagagaaatgatatttgaacatctatttagtgacaactttt 8821668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 21196123 - 21196160
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactt 207  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  21196123 agagaaatgatatttgaacatccattttgtgacaactt 21196160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 196
Target Start/End: Complemental strand, 32759974 - 32759945
Alignment:
Q  167 attagagaaatgatatttgaacattcattt 196  Q
    ||||||||||||||||||||||||||||||    
T  32759974 attagagaaatgatatttgaacattcattt 32759945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 42683824 - 42683857
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtga 201  Q
    ||||||||||||||||||||||||||||| ||||    
T  42683824 ttagagaaatgatatttgaacattcattttgtga 42683857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 28430740 - 28430792
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    ||||||||| |||||||||||| |||||| | |||||||| ||| ||||||||    
T  28430740 tagagaaataatatttgaacatccatttgataacaactttctctatcatactc 28430792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 46574150 - 46574182
Alignment:
Q  171 gagaaatgatatttgaacattcatttggtgaca 203  Q
    |||||||||||||||||||||||||| ||||||    
T  46574150 gagaaatgatatttgaacattcattttgtgaca 46574182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 44785 - 44835
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttttctctcatact 220  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  44785 agagaaatgatatttgaacatccattttgtgacaactttctctctcatact 44835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 19634 - 19674
Alignment:
Q  169 tagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  19634 tagagaaatgatatttgaacatccatttagtgacaactttt 19674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 8213 - 8252
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  8213 agagaaatgatatttgaacattcattttatgacaactttt 8252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 22577 - 22616
Alignment:
Q  170 agagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  22577 agagaaatgatatttgaacattcattttgtgacagctttt 22616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 38422 - 38463
Alignment:
Q  168 ttagagaaatgatatttgaacattcatttggtgacaactttt 209  Q
    |||||||||| ||||||||||||||||||  |||||||||||    
T  38422 ttagagaaataatatttgaacattcattttatgacaactttt 38463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 31670 - 31610
Alignment:
Q  161 ttttctattagagaaatgatatttgaacattcatttggtgacaactttttctctcatactc 221  Q
    |||||| | |||||||||||||||| |||  |||||  |||||||||| ||||||||||||    
T  31670 ttttctttaagagaaatgatatttgtacaaccattttttgacaactttctctctcatactc 31610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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