View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1704-Insertion-5 (Length: 166)
Name: NF1704-Insertion-5
Description: NF1704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1704-Insertion-5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 151; Significance: 3e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 3e-80
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 2064630 - 2064472
Alignment:
| Q |
8 |
ccttccgattctgatctcgcgaaaattctccgatcaacttcttcagacagtttccgagttgatatcggaaatataagccgccgtggaaacaatcttccca |
107 |
Q |
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| T |
2064630 |
ccttccgattctgatctcgcaaaaattctccgatcaacttcttcagacagtttccgagttgatatcggaaatataagccgccgtggaaacaatcttccca |
2064531 |
T |
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| Q |
108 |
atcccgacgccgttactaccggtggcgattcaaggtcttattcaattggatcgtttgag |
166 |
Q |
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| T |
2064530 |
atcccgacgccgttactaccggtggcgattcaaggtcttattcgattggatcgtttgag |
2064472 |
T |
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