View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17041_high_25 (Length: 229)
Name: NF17041_high_25
Description: NF17041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17041_high_25 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7499099 - 7499321
Alignment:
| Q |
1 |
ttggaaggggaaggaatggtaagagtggtatgtggaagcaacaatgatgacaaatgcaaaaacaagaggtttagagttcagcaaggagatgtttttgtgg |
100 |
Q |
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| T |
7499099 |
ttggaaggggaaggaatggtaagagtggtatgtggaagcaacaatgatgacaaatgcaaaaacaagaggtttagagttcagcaaggagatgtttttgtgg |
7499198 |
T |
|
| Q |
101 |
tgcctaggtttcatccaatggctcaaatgtcatttgttaatcagacacttgtttttatgggattcagcactgctgcaaagaaaaatcatcctcagttttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7499199 |
tgcctaggtttcatccaatggctcaaatgtcatttgttaatcagccacttgtttttatgggattcagcactgctgcaaagaaaaatcatcctcagttttt |
7499298 |
T |
|
| Q |
201 |
ggctggtaaagaatctgtgctgc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
7499299 |
ggctggtaaagaatctgtgctgc |
7499321 |
T |
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