View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17041_low_19 (Length: 297)
Name: NF17041_low_19
Description: NF17041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17041_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 31950401 - 31950678
Alignment:
| Q |
1 |
cgtgtcagttttcgattttccatcaccatcttacttttacttgatgaacaattatgtgatcctcctacaattttacaatggttgcaattgtgactcttca |
100 |
Q |
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| T |
31950401 |
cgtgtcagttttcgattttccatcaccatcttacttttacttgatgaacaattctgtgatcctcctataattttacaatggttgcaattgtgactcttca |
31950500 |
T |
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| Q |
101 |
tgatgggaagcttatcttttctgattgaggctatattgtgttcatggtcatccatagaataatagttccagtttgaatatgtcccttgtgaagagcatct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
31950501 |
tgatgggaagcttatcttttctgattgaggctatattgtgttcatggtcatccatagaataatagttccagtttgaatatgtcccttgtgaggagcatct |
31950600 |
T |
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| Q |
201 |
tgaactgttatcatcatgcaaatcatctgcaacaaaagttttgcatgttaccatggagacttaaaaaatagtcaaacc |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31950601 |
tgaactgttatcatcatgcaaatcatctgcaacaaaagttttgcatgttaccatggagacttaaaaaatagtcaaacc |
31950678 |
T |
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