View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17042_low_4 (Length: 376)

Name: NF17042_low_4
Description: NF17042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17042_low_4
NF17042_low_4
[»] chr3 (9 HSPs)
chr3 (7-372)||(13307971-13308336)
chr3 (7-372)||(10149521-10149886)
chr3 (7-372)||(14694322-14694687)
chr3 (7-372)||(10780910-10781275)
chr3 (6-171)||(16467032-16467197)
chr3 (6-171)||(16470903-16471068)
chr3 (6-109)||(15201041-15201144)
chr3 (6-125)||(14135451-14135570)
chr3 (6-92)||(15240245-15240331)
[»] chr2 (7 HSPs)
chr2 (7-371)||(23201723-23202087)
chr2 (7-371)||(23675564-23675928)
chr2 (7-371)||(22637051-22637415)
chr2 (7-370)||(24910629-24910992)
chr2 (6-370)||(23815636-23816000)
chr2 (19-109)||(19118882-19118972)
chr2 (19-94)||(25117532-25117607)
[»] chr7 (6 HSPs)
chr7 (7-371)||(18172730-18173094)
chr7 (7-372)||(14343752-14344117)
chr7 (6-371)||(15763748-15764112)
chr7 (16-371)||(11978017-11978372)
chr7 (118-372)||(18134631-18134885)
chr7 (7-124)||(18139895-18140012)
[»] scaffold0130 (1 HSPs)
scaffold0130 (7-371)||(37335-37699)
[»] chr6 (6 HSPs)
chr6 (7-376)||(23433831-23434199)
chr6 (7-372)||(19036273-19036637)
chr6 (6-371)||(1552263-1552627)
chr6 (7-247)||(16211719-16211959)
chr6 (18-187)||(19270432-19270601)
chr6 (6-74)||(17801880-17801948)
[»] chr4 (3 HSPs)
chr4 (7-371)||(13290464-13290828)
chr4 (7-372)||(14773663-14774028)
chr4 (9-352)||(18564918-18565261)
[»] chr8 (4 HSPs)
chr8 (7-372)||(17423950-17424315)
chr8 (7-364)||(22349868-22350225)
chr8 (6-371)||(22066493-22066858)
chr8 (175-372)||(15913038-15913235)
[»] scaffold0022 (1 HSPs)
scaffold0022 (7-371)||(16129-16493)
[»] scaffold0080 (1 HSPs)
scaffold0080 (7-371)||(4307-4671)
[»] chr5 (6 HSPs)
chr5 (7-370)||(21509723-21510086)
chr5 (7-362)||(26271951-26272305)
chr5 (6-109)||(22853604-22853707)
chr5 (19-109)||(23658376-23658466)
chr5 (19-109)||(23800104-23800194)
chr5 (22-154)||(25557181-25557313)
[»] scaffold0040 (1 HSPs)
scaffold0040 (7-372)||(28414-28769)
[»] scaffold0001 (1 HSPs)
scaffold0001 (7-372)||(127819-128183)
[»] chr1 (3 HSPs)
chr1 (7-372)||(22806933-22807298)
chr1 (7-372)||(41381419-41381784)
chr1 (81-370)||(21166246-21166535)
[»] scaffold0108 (1 HSPs)
scaffold0108 (7-371)||(24941-25305)
[»] scaffold0023 (3 HSPs)
scaffold0023 (7-371)||(64065-64429)
scaffold0023 (7-371)||(73243-73607)
scaffold0023 (6-160)||(4723-4877)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-372)||(65702-66067)
[»] scaffold0026 (1 HSPs)
scaffold0026 (7-370)||(140060-140423)
[»] scaffold0656 (1 HSPs)
scaffold0656 (6-371)||(3774-4139)
[»] scaffold0064 (1 HSPs)
scaffold0064 (7-371)||(38690-39053)
[»] scaffold0282 (1 HSPs)
scaffold0282 (7-372)||(6634-6999)
[»] scaffold0019 (1 HSPs)
scaffold0019 (6-371)||(160163-160528)
[»] scaffold0423 (1 HSPs)
scaffold0423 (6-371)||(3835-4200)
[»] scaffold0046 (1 HSPs)
scaffold0046 (6-314)||(32484-32791)
[»] scaffold0740 (1 HSPs)
scaffold0740 (7-188)||(280-461)
[»] scaffold0016 (1 HSPs)
scaffold0016 (6-371)||(180400-180765)
[»] scaffold0362 (1 HSPs)
scaffold0362 (30-305)||(13226-13501)
[»] scaffold0319 (1 HSPs)
scaffold0319 (7-200)||(8620-8813)
[»] scaffold0013 (6 HSPs)
scaffold0013 (6-371)||(146524-146889)
scaffold0013 (22-371)||(82529-82878)
scaffold0013 (22-371)||(120201-120550)
scaffold0013 (127-371)||(147685-147929)
scaffold0013 (6-131)||(133279-133404)
scaffold0013 (6-131)||(137808-137933)
[»] scaffold0053 (1 HSPs)
scaffold0053 (30-371)||(43376-43717)
[»] scaffold0029 (1 HSPs)
scaffold0029 (6-370)||(68765-69129)
[»] scaffold0008 (1 HSPs)
scaffold0008 (7-352)||(134699-135044)
[»] scaffold0241 (1 HSPs)
scaffold0241 (272-372)||(10472-10572)
[»] scaffold1714 (1 HSPs)
scaffold1714 (6-94)||(1357-1445)
[»] scaffold0757 (1 HSPs)
scaffold0757 (19-93)||(1880-1954)
[»] scaffold0401 (2 HSPs)
scaffold0401 (23-109)||(1397-1483)
scaffold0401 (252-372)||(1626-1746)
[»] scaffold0063 (1 HSPs)
scaffold0063 (6-109)||(45761-45864)


Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 13308336 - 13307971
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13308336 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 13308237  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||||||||    
T  13308236 agccagaacgaataggttccctaagaaagagaaagttgcttatatcgatactagggatagtgagccagaattcgattggggttccgattctgtagaagat 13308137  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||||||||||||||||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| |  |||||| ||||||||||||    
T  13308136 aacgaaataaatctcgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgcagaagaacccaaaaatgata 13308037  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13308036 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 13307971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 7 - 372
Target Start/End: Original strand, 10149521 - 10149886
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || ||||| |||||||||||    
T  10149521 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 10149620  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||||| || |||||||||||||||    
T  10149621 agccaaaacaaataggttccctaagaaagagaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagat 10149720  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| || |||||| | ||||||||||    
T  10149721 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaatgggaaaaacgtagaagaaccaaaaaatgata 10149820  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10149821 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagttg 10149886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 14694687 - 14694322
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14694687 tagattattctgtccgaaagaaattggatatacaataccttagggatatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 14694588  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| | |||||||||||||||  |||||||| ||||||    
T  14694587 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggaaagtgagccagaattcgattggggtttcgattctgtcgaagat 14694488  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    |||||| |||||||||| ||||||||||||||||  ||||||||||| ||||| |||||||||||||| |||||||| || |||||| ||||||||||||    
T  14694487 agcgaagtaaatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagaacccaaaaatgata 14694388  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  14694387 aatatcccccaaaaacttatacttttgatgtgtctaagtgtgaagaaatattcgatcttttagttg 14694322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 7 - 372
Target Start/End: Original strand, 10780910 - 10781275
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| | || ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10780910 tagattattccgtccgaaagaaattggatacacaataccttagggacatggcacaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 10781009  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || || |||||||| |||||||||||||| ||||||| ||| ||||| |||||||||||||||| | |||||||||||||||  ||||| || || ||     
T  10781010 ggccaggacaaatagattccctaagaaagaaaaagttggttacatcgaaactggggatagtgagccagaattcgattggggtttcgattccgttgaggac 10781109  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    ||||||||||||||||| || |||||||| ||||  |||||||||||||||||||||||||||||||| || ||||| || |||||  |||||||| |||    
T  10781110 agcgaaataaatctcgcggagttaaaagaagggccgccttacacttgcaaattgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaattata 10781209  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||| ||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||    
T  10781210 aatatccctcaaaaacttatacgtttgatgtatctaaaagcgaagaaatatttgatcttttagttg 10781275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 6 - 171
Target Start/End: Original strand, 16467032 - 16467197
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| ||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  16467032 ctagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaa 16467131  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagc 171  Q
    |||| | |||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  16467132 aagccaaaacaaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagc 16467197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 16471068 - 16470903
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| ||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  16471068 ctagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaa 16470969  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagc 171  Q
    |||| | |||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  16470968 aagccaaaacaaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagc 16470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 15201041 - 15201144
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| || ||| ||||||||||||||  |||||||| || || ||||| |||||||||||||||||||| ||||| |||||||| || |||||||    
T  15201041 ctagactattctattcaaaagaaattagatatgcaatatctaagagatatggcacaattagcagatagagtccgacaagtcgaaagacttaaagctgaaa 15201140  T
Q  106 aagc 109  Q
    ||||    
T  15201141 aagc 15201144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 14135451 - 14135570
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| || ||| ||||||| |||||||||||||||| || || ||||| |||||||| ||||||||| | ||||| | |||||| || | |||||    
T  14135451 ctagactattctattcaaaagaaactagatacacaatatctaagagatatggcacaattagctgatagagtctgacaagtcggaagacttaaagatgaaa 14135550  T
Q  106 aagctagaacaaataggttc 125  Q
    |||| || || |||||||||    
T  14135551 aagcaaggactaataggttc 14135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 15240245 - 15240331
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaaga 92  Q
    ||||| ||| || ||| ||||||||||||||  |||||||| || || || ||||||||||||||||||||||| ||||| ||||||    
T  15240245 ctagactattctattcaaaagaaattagatatgcaatatctaagagatatagcgcaattagcagatagagtccgacaagtcgaaaga 15240331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 23202087 - 23201723
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  23202087 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 23201988  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
T  23201987 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagat 23201888  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||||||||||    
T  23201887 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23201788  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  23201787 aatatcccctaaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatcttctagtt 23201723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 23675928 - 23675564
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  23675928 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 23675829  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
T  23675828 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagat 23675729  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||||||||||    
T  23675728 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23675629  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  23675628 aatatcccctaaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatcttctagtt 23675564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 22637051 - 22637415
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||||||||||||    
T  22637051 tagattattttgttcgaaagaaattagatacacaatatcttagggacatggcgaaattagcagatagggttcaccaagtggaaagactcaaggctgaaaa 22637150  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
T  22637151 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagctagaattcgattggggttcagattctgtagaagat 22637250  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| | |||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| || |||||| ||||||||||||    
T  22637251 aacgaaataaatcttgtagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 22637350  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22637351 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 22637415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 7 - 370
Target Start/End: Original strand, 24910629 - 24910992
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| || ||||| |||||||||||    
T  24910629 tagattattctgttcggaagaaattagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagtcgagagacttaaggctgaaaa 24910728  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| || |||    
T  24910729 agccagaacaaataggttccctaagaaagaaaaagttgcttatgtcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggat 24910828  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||||||||||||||| ||||||||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||| | || ||| | ||||||||||    
T  24910829 aacgaaataaatctcgcggaattaaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaggaacctaaaaatgata 24910928  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 370  Q
    | |||| ||| ||||| || ||||| ||||| |||||||||||||| || ||||||||| ||||    
T  24910929 agtatcacccgaaaacatacactttcgatgtatctaaatgtgaagagatttttgatcttctagt 24910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 370
Target Start/End: Original strand, 23815636 - 23816000
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| |||||| |||||| || ||||| || || ||||| || ||||| || || ||||| |||||||| ||||| |||||||| ||||||||||    
T  23815636 ctagattattctgttctaaagaagttggatactcagtaccttagagatatggcacagttggcagacagagtccgacaagtcgaaagacttaaggctgaaa 23815735  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    || |  | ||||| | |||||| || |  ||||||||||| || || || ||  | || ||||| | | ||| |||||  || ||  || |||| |||||    
T  23815736 aaccccggacaaacaagttccccaaaagggagaaagttgcctacatagacacaagagacagtgacccagaatacgattaagggtcatatactgtcgaaga 23815835  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    ||  ||| | ||||| | ||||||||||||||| |  || ||  ||||||||||  |||||||||| ||||| ||||||   |||||| | ||||| ||     
T  23815836 taatgaagttaatcttgtagaattaaaagatggaccgccctatgcttgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaacgac 23815935  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 370  Q
    |||||||| |  ||||| |||||||| ||||| |||||||||||||| || || ||||| |||||    
T  23815936 aaatatcctcttaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatctcttagt 23816000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 19118972 - 19118882
Alignment:
Q  19 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 109  Q
    ||||||||||||||||||| || ||||| || || ||||| ||||||||||||||| |||| ||||| |||||||  || |||||||||||    
T  19118972 ttcgaaagaaattagatacgcagtatctaagagatatggcacaattagcagatagaatccgacaagtcgaaagacataaagctgaaaaagc 19118882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 25117607 - 25117532
Alignment:
Q  19 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagact 94  Q
    ||||||||||||||||||| || ||||| || || ||||  ||| |||||||||||||||| ||||| ||||||||    
T  25117607 ttcgaaagaaattagatactcagtatctaagagatatggtacaactagcagatagagtccgacaagtcgaaagact 25117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 18173094 - 18172730
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  18173094 tagattattctgttcgaaagaaagtagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagttgaaagactcaaggctgaaaa 18172995  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||    
T  18172994 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactgaggatagtgagccagaattcgattggggttcagattctgtagaagat 18172895  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||| ||||||||||  ||||||||||||||||| || |||||||||||||| ||||| || |||||| ||||||||||||    
T  18172894 aacgaaataaatcttgcagaattgaaagatgggccgccttacacttgcaaattattgaggccatcaaatggaaaaaacgtagaagaacccaaaaatgata 18172795  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18172794 agtatcccccgaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 18172730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 14344117 - 14343752
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14344117 tagattattccgtccgaaagaaattggatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 14344018  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | | |||||||||||||||  |||||||| ||||||    
T  14344017 agccaggacaaataggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagat 14343918  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||||| || ||||| || |||||  ||||||||||||    
T  14343917 agcgaaataaatctcgcggaattaaaagatgggccaccttacacttgtaaaatgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaatgata 14343818  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14343817 aatatccccccaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 14343752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 15763748 - 15764112
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  15763748 ctagattattctattcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaa 15763846  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| || ||    
T  15763847 aagccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgagga 15763946  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || |||| ||||||||||||||||||||||||| |  ||||| ||||| || ||  |||||||||  ||||| |||||| | |||||| | |||||||||    
T  15763947 taacgaagtaaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgat 15764046  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    || |||||||||||||| |||| ||||||||| |||||||||||||| || ||||||||| |||||    
T  15764047 aagtatcccccaaaaacatatagttttgatgtatctaaatgtgaagagatttttgatcttctagtt 15764112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 371
Target Start/End: Complemental strand, 11978372 - 11978017
Alignment:
Q  16 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 115  Q
    ||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||| |||||| || |||||||||||||| || ||    
T  11978372 ctgttcggaaaaaattagatacacaatatcttagggatatggcacaattagcagatagagtctgccaagctgaaaggcttaaggctgaaaaagccaggac 11978273  T
Q  116 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 215  Q
    ||||||||||||||||||||| || |||||||||||||||||| | |||||||| | | ||||||||||||| ||||| ||||| || |||| |||||||    
T  11978272 aaataggttccctaagaaagaaaaggttgcttatatcgatactcgagatagtgatccagaattcgattggggatctgagtctgttgatgataacgaaata 11978173  T
Q  216 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 315  Q
    ||||| |||||||||||||||||||   |||| ||||| || ||  ||||| |||||||||| |||||| |||||||| | |||||||||||||||||||    
T  11978172 aatcttgcagaattaaaagatgggccggcttatacttgtaagttactaaggtcatcaaatggaaaaaatctggaagaacctaaaaatgataaatatcccc 11978073  T
Q  316 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    | ||||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
T  11978072 cgaaaacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 11978017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 118 - 372
Target Start/End: Complemental strand, 18134885 - 18134631
Alignment:
Q  118 ataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaa 217  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||| | | |||||||||||||  ||||| || || ||||||||| ||||    
T  18134885 ataggttccctaagaaagaaaaagttgcttatatcgaagctggggatagtgagccagagttcgattggggtttcgattccgtcgaggatagcgaagtaaa 18134786  T
Q  218 tctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatccccca 317  Q
    ||||||  |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||| || ||||| ||||||||||||||||||||||||    
T  18134785 tctcgcgaaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaacggaaaaaacgtagaagagtccaaaaatgataaatatccccca 18134686  T
Q  318 aaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18134685 aaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 18134631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 18140012 - 18139895
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18140012 tagattattctgttcgaaagaaattagatacacaataccttagagacatggcacaattagcagatagagtccgccaagttgaaagactcaaagctgaaaa 18139913  T
Q  107 agctagaacaaataggtt 124  Q
    ||| || |||||||||||    
T  18139912 agccaggacaaataggtt 18139895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 37335 - 37699
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||    
T  37335 tagattattctgttcgaaagaaattagatacacaatatcttagggacatagcgcaattagcagatagggttcgccaagtcgaaagactcaaggctgaaaa 37434  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||| ||||  |||||||||    
T  37435 agccagaacaaataggttccttaagaaagagaaacttgcttatatcgatattggggatagtgagccagaattcgattggggttcagatttagtagaagat 37534  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| || |||||| ||||||||||||    
T  37535 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 37634  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37635 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 37699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 266; Significance: 1e-148; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 7 - 376
Target Start/End: Original strand, 23433831 - 23434199
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||    
T  23433831 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagtagatagggttcgccaagtcgaaagactcaaggctgaaaa 23433930  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||| |||| ||||||||||    
T  23433931 agccagaacgaataggttccctaagaaagagaaagttgcttatattgatactggg-atagtgagccagaattcgattggggttcagattatgtagaagat 23434029  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  |||| |||||||||||| || |||||||||||||||||||| || |||||| ||||||||||||    
T  23434030 aacgaaataaatcttgcagaattaaaagatgggccgcctttcacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 23434129  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatga 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  23434130 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtttatga 23434199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 19036637 - 19036273
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||    
T  19036637 tagattattctattcgaaagaaattagatacacaatatcatagggacatggcgcaattagcagatagagttcgccaagtcgagagacttaaggctgaaaa 19036538  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| ||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||||||| | ||||||||||||| || |||||||||||||||    
T  19036537 agccagaacaaatagattccctaagaaagagaaatttgcttatatagatactggagatagtgagccagaattcgattggggatcagattctgtagaagat 19036438  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  19036437 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggcc-tcaaatgggaaaaatgtagaagaacccaaaaatgata 19036339  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  19036338 aatatcccccaaaaacttatacttttaatgtgtctaaatgtgaagaaatatttgatcttctagttg 19036273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 6 - 371
Target Start/End: Complemental strand, 1552627 - 1552263
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  1552627 ctagattattctattcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaa 1552529  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| || ||    
T  1552528 aagccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgagga 1552429  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || |||| ||||||||||||||||||||||||| |  ||||| ||||| || ||  |||||||||  ||||| |||||| | |||||| | |||||||||    
T  1552428 taacgaagtaaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgat 1552329  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    || |||||||||||||| |||| ||||||||| |||||||||||||| || ||||||||| |||||    
T  1552328 aagtatcccccaaaaacatatagttttgatgtatctaaatgtgaagagatttttgatcttctagtt 1552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 16211719 - 16211959
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| || ||||  || ||||||||    
T  16211719 tagattattctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacataaagctgaaaa 16211818  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| |||||     
T  16211819 ggccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagaa 16211918  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaacctta 247  Q
    | |||||||||||||||||||||||| ||||||| ||||||    
T  16211919 aacgaaataaatctcgcagaattaaaggatgggccacctta 16211959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 19270601 - 19270432
Alignment:
Q  18 gttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaa 117  Q
    |||||||||||  | ||||| ||||| |||||||| ||||| ||||||||||||| ||| || ||||| ||||| || |||||||| |||||  ||||||    
T  19270601 gttcgaaagaatatggatactcaataccttagggatatggcacaattagcagatatagttcgacaagtcgaaaggcttaaggctgagaaagcccgaacaa 19270502  T
Q  118 ataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattgggg 187  Q
    |||||||||| || |  ||||||||||| ||| | || || || || ||||| | | |||||||||||||    
T  19270501 ataggttcccaaaaagggagaaagttgcctatgtagacacaggagacagtgacccagaattcgattgggg 19270432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 17801948 - 17801880
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagataga 74  Q
    ||||| ||| || ||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||    
T  17801948 ctagactattctattcgaaagaaattagatacgcagtatctaagggatatggcgcaattagcagataga 17801880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 13290828 - 13290464
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||    
T  13290828 tagattattctgttcgaaagaaattagatacacaatatattagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaa 13290729  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||| ||||||| ||| |||    
T  13290728 ggccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgaaccagaattcgattggggttcagattctggagaggat 13290629  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| ||||||||||||    
T  13290628 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 13290529  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13290528 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 13290464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 14774028 - 14773663
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || ||||| || ||||||||    
T  14774028 tagattattctattcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 14773929  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     |  |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
T  14773928 ggtcagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagat 14773829  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||| || ||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||||||||||||||    
T  14773828 aacgaaataaatcttgcagaattgaaggatgggccaccttatacttgtaacttattaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgata 14773729  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||| |||| ||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  14773728 aatatcccccgaaaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttg 14773663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 352
Target Start/End: Complemental strand, 18565261 - 18564918
Alignment:
Q  9 gattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaag 108  Q
    |||||| ||||||||||||| || || || ||||| ||||| || |||||  |  | ||||| |||||||| ||||| ||||| || |||||||||||||    
T  18565261 gattattctgttcgaaagaagttggacactcaataccttagagatatggcatagctggcagacagagtccgacaagtcgaaaggcttaaggctgaaaaag 18565162  T
Q  109 ctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatag 208  Q
    |  | |||| || |||||||||||  ||||||||||| ||  | || |||||  | ||||| | | ||||||||||||| || ||| |||| |||||||     
T  18565161 cccggacaagtaagttccctaagagggagaaagttgcctacgtagacactggaaacagtgacccagaattcgattgggggtcagatactgtcgaagataa 18565062  T
Q  209 cgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaa 308  Q
     ||||||||||| ||||||||||||||||| |  |  ||  | ||||||||  |||||||||| ||||| ||||||   |||||| | |||||||| |||    
T  18565061 tgaaataaatcttgcagaattaaaagatggaccgctctatgcctgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaatgacaaa 18564962  T
Q  309 tatcccccaaaaacttatacttttgatgtgtctaaatgtgaaga 352  Q
    ||||| || ||||| |||||||| ||||| ||||||||||||||    
T  18564961 tatcctcctaaaacatatactttcgatgtttctaaatgtgaaga 18564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 17424315 - 17423950
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17424315 tagattattctgttcgaaagaaattagatacacagtatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaa 17424216  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||    |||||||||| |||    
T  17424215 agccagaacaaataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccaaaattcgattggggtcacaattctgtagaggat 17424116  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    |||||||||||||||||||||||||| ||| |||  ||||||| ||||||||| || ||||||||||| |||||||| || |||||  |||||||||| |    
T  17424115 agcgaaataaatctcgcagaattaaaggataggccgccttacatttgcaaattattgaggccatcaaacgggaaaaacgtagaagagcccaaaaatgaca 17424016  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17424015 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttttagttg 17423950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 7 - 364
Target Start/End: Complemental strand, 22350225 - 22349868
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||    
T  22350225 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 22350126  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
T  22350125 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagat 22350026  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||| |||||||| |||||||||||||||||||  ||||| ||||| || || |||||||||| |||||| ||||| || ||||| |||||||||||||    
T  22350025 aacgagataaatcttgcagaattaaaagatgggccgccttatacttgtaagttattaaggccataaaatggaaaaaacgtagaagagtccaaaaatgata 22349926  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatct 364  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22349925 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatct 22349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 22066493 - 22066858
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  22066493 ctagactattctgttcggaagaaattagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaaggtttaaggctgaaa 22066592  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    |||| || ||||||||||||||||||||||| |  ||||||||||| |||||||| |||||||| | | ||||||||||||| ||| | ||||| || ||    
T  22066593 aagccaggacaaataggttccctaagaaagaaatggttgcttatatagatactggagatagtgatccagaattcgattggggatctaaatctgttgatga 22066692  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || |||||||||||||||||||||||||||||||| |||||| ||||| || ||  |||||||||||||||| |||||| | |||||| | |||||||||    
T  22066693 taacgaaataaatctcgcagaattaaaagatgggccaccttatacttgtaagttactaaggccatcaaatggaaaaaatctagaagaacctaaaaatgat 22066792  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||| | ||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
T  22066793 aaatatcccccgataacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 22066858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 372
Target Start/End: Original strand, 15913038 - 15913235
Alignment:
Q  175 aattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaa 274  Q
    ||||||||| ||| || ||| |||| |||||||  || || |||||||||||||||||||||||||  | |||  | || ||| ||||||||||||| ||    
T  15913038 aattcgattagggatcagatactgtcgaagataatgagattaatctcgcagaattaaaagatgggcctctttatgcatgtaaactgttaaggccatcgaa 15913137  T
Q  275 tgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    ||| ||||||   |||||| | || ||||| ||||| || || ||||| ||||  |||||||| ||||| || || ||||| ||||||||||| ||||    
T  15913138 tggaaaaaatcctgaagaaccaaagaatgacaaataccctcctaaaacatatatctttgatgtttctaagtgcgaggaaatctttgatcttttggttg 15913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 16129 - 16493
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  16129 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaa 16228  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| | |||||| ||||||||| ||||||||||| |||    
T  16229 agccagaacaaataggttccctaataaagagaaagttgcttatatcgatactggtgattgtgagccagaattcgtttggggttcagattctgtagatgat 16328  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||| |||||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| ||||| ||||||    
T  16329 aacgatataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaacatgata 16428  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16429 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 16493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 4307 - 4671
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| || ||||| |||||||||||    
T  4307 tagattattctattcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagacagggttcgccaagtcgagagacttaaggctgaaaa 4406  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
T  4407 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgtggaagat 4506  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  |||||||| || ||||||||||||||||||||||| ||||| || |||||||||||||||| ||    
T  4507 aacgaaataaatcttgcagaattaaaagatgggccgccttacacctgtaaattgttaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgtta 4606  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||    
T  4607 aatatcccccaaaaacttatacttttgatgtatctaagtgtgaagagatatttgatcttctagtt 4671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 7 - 370
Target Start/End: Original strand, 21509723 - 21510086
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |||||||| || ||||| |||||||||||    
T  21509723 tagattattctgttcgaaagaaattagatacataatatcttagggacatggcacaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 21509822  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||| |||||||| ||||||    
T  21509823 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctgttgaagat 21509922  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||| |||||||| |||||||||||||||||||  | ||||||||| ||||| ||||||||||||||||||||||| || |||||  ||||||||||||    
T  21509923 aacgagataaatcttgcagaattaaaagatgggccgctttacacttgtaaattattaaggccatcaaatgggaaaaacgtagaagagcccaaaaatgata 21510022  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 370  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  21510023 aatatcccccaaaaacttatacctttgatgtatctaaatgtgaagaaatatttgatcttctagt 21510086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 7 - 362
Target Start/End: Complemental strand, 26272305 - 26271951
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| || ||||| |||||||||||    
T  26272305 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgagagacttaaggctgaaaa 26272206  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||| |||||| | || |||    
T  26272205 agccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctattgaggat 26272106  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||| |||||||| |||||| ||||||||||||  ||||||||||| |||||||| |||||||||||||||||||| || |||||  ||||||| ||||    
T  26272105 aacgagataaatcttgcagaactaaaagatgggccgccttacacttgtaaattgttgaggccatcaaatgggaaaaacgtagaagagcccaaaaa-gata 26272007  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgat 362  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26272006 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgat 26271951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 22853707 - 22853604
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| || ||| ||||||||||||||| || ||||| || || ||| | ||| ||||||||||| |||| |||||||||||||| || |||||||    
T  22853707 ctagactattctattcaaaagaaattagatactcagtatctaagagatatgacacaactagcagatagactccgacaagttgaaagacttaaagctgaaa 22853608  T
Q  106 aagc 109  Q
    ||||    
T  22853607 aagc 22853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 23658376 - 23658466
Alignment:
Q  19 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 109  Q
    ||||||| ||||||||||| || ||||| || || ||||| || ||||||||||||||||| ||||  |||||||| || |||||||||||    
T  23658376 ttcgaaataaattagatacgcagtatctaagagatatggcacagttagcagatagagtccgacaagccgaaagacttaaagctgaaaaagc 23658466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 23800194 - 23800104
Alignment:
Q  19 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 109  Q
    ||||||| ||||||||||| || ||||| || || ||||| || ||||||||||||||||| ||||  |||||||| || |||||||||||    
T  23800194 ttcgaaataaattagatacgcagtatctaagagatatggcacagttagcagatagagtccgacaagccgaaagacttaaagctgaaaaagc 23800104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 25557181 - 25557313
Alignment:
Q  22 gaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatag 121  Q
    ||||||||||||| || | |||| | | ||||||||  ||||| ||||||| ||| |  |||||||| || ||||| |||||||| ||||| |||| ||     
T  25557181 gaaagaaattagacactcgatatttaatggacatggtccaattggcagataaagttcaacaagttgagaggctcaaagctgaaaaggctaggacaagtaa 25557280  T
Q  122 gttccctaagaaagagaaagttgcttatatcga 154  Q
     | || ||| |||||||| ||||||||| ||||    
T  25557281 ataccataaaaaagagaaggttgcttatgtcga 25557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 7 - 372
Target Start/End: Original strand, 28414 - 28769
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||       ||||||  ||| ||| |||||||||||    
T  28414 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattag---ata-------ccaagtcaaaaaacttaaggctgaaaa 28503  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||| |||||||||||||||    
T  28504 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggttcagattctgtagaagat 28603  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| ||||||||||||    
T  28604 aacgaaataaatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgata 28703  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  28704 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagagatatttgatcttctagttg 28769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 128183 - 127819
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| || ||||| |||||||||||    
T  128183 tagattattctgttcgaaagaaattagatacacaatatcttagggacatggtgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaa 128084  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||| ||| ||||||    
T  128083 agccagaacaaataggttccctaacaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattttgttgaagat 127984  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    |  || |||||||| |||||||||||||||||||  ||||||||||| || |  ||||||||||||||||||||||| || ||||| ||||||||||||     
T  127983 aatgagataaatcttgcagaattaaaagatgggccgccttacacttgtaagtcattaaggccatcaaatgggaaaaacgtagaagagtccaaaaatgat- 127885  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  127884 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagttg 127819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 22807298 - 22806933
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| || ||||| || ||||||||    
T  22807298 tagattattctgttcaaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 22807199  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||| ||||||||||||||| || |||||||| ||||||    
T  22807198 ggccagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccaaaattcgattggggatccgattctgttgaagat 22807099  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||| |||||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||| ||||||||||    
T  22807098 aacgaaataaatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgata 22806999  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  22806998 aatatcccccgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttg 22806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 41381784 - 41381419
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| | || ||||||||||| ||||||||||| ||||| |||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  41381784 tagattattccgtccgaaagaaattggatacacaataccttagagacatggcacaattagcaaatagggtccgccaagtggaaagactcaaggctgaaaa 41381685  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || || ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||| | |||||||||||||||   |||| || || |||    
T  41381684 ggccaggacaaataggttccctaagaaagataaagttgcttacatcgaaactggggatagtgagccagaattcgattggggtttcaattccgttgaggat 41381585  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    |||||| |||||||||| || |||||||| ||||  |||||||||| |||||| ||||||| |||||| ||||||||||| |||||  ||||||| ||||    
T  41381584 agcgaagtaaatctcgcggagttaaaagaggggccgccttacactttcaaattattaaggcaatcaaacgggaaaaatgtagaagagcccaaaaacgata 41381485  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  41381484 aatatcccccaaaaacttatacttttgatgtatctaaatgcgaagaaatatttgatcttttagttg 41381419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 81 - 370
Target Start/End: Complemental strand, 21166535 - 21166246
Alignment:
Q  81 caagttgaaagactcaaggctgaaaaagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcg 180  Q
    ||||| ||||| || |||||||| |||||  | | |||||| ||||||||||| ||||||||||| ||| | ||||| || || ||||| | | ||||||    
T  21166535 caagtcgaaaggcttaaggctgagaaagcccggagaaatagattccctaagaaggagaaagttgcctatgtggataccggagacagtgatccagaattcg 21166436  T
Q  181 attggggttctgattctgtagaagatagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaa 280  Q
    ||||||| || ||| |||| |||||||  ||||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||| ||    
T  21166435 attgggggtcagatactgtcgaagataatgaaataaatctcgcagaattaaaagatgggccaccttatacctgcaaattattaaggccatcaaatggcaa 21166336  T
Q  281 aaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 370  Q
    |||    |||||| | |||||||| |||||||| || ||||| ||||| |||||||| |||||||||||||| || || |||||||||||    
T  21166335 aaaccatgaagaacctaaaaatgacaaatatcctccgaaaacatatacctttgatgtttctaaatgtgaagagatcttcgatcttttagt 21166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 24941 - 25305
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  || |||||||| |||||||| |||||||||||    
T  24941 tagattattctgttcgaaagaaattagacacccaatatcttagggacatggcgcaattagcagataaggttcgccaagtcgaaagacttaaggctgaaaa 25040  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || |||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||| | ||||||||||||| || |||||||||||||||    
T  25041 ggccagaacaaataggttccttaagaaagagaaagtcgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagat 25140  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| || ||||| |||||||||| |||||||||||| ||| | || |||||||| || |||||||| || || ||| ||||||| ||||    
T  25141 aacgaaataaatcttgcggaattgaaagatgggccaccttacacttgtaaagtattgaggccatcgaacgggaaaaacgtagaggaacccaaaaacgata 25240  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
T  25241 aatatcccccaaaaacttaaacttttgaagtgtctaaatgcgaagaaatatttgatcttctagtt 25305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 213; Significance: 1e-117; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 64065 - 64429
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||    
T  64065 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 64164  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || || ||||   |||||    
T  64165 agccagaacaaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagat 64264  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||| |||||||| |||||||||||||||||||   |||| ||||| || || ||||||||||||| ||| ||||| || ||||| | |||||||||||    
T  64265 aacgagataaatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgata 64364  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  64365 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagtt 64429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 371
Target Start/End: Original strand, 73243 - 73607
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||    
T  73243 tagattattctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaa 73342  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || || ||||   |||||    
T  73343 agccagaacaaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagat 73442  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | ||| |||||||| |||||||||||||||||||   |||| ||||| || || ||||||||||||| ||| ||||| || ||||| | |||||||||||    
T  73443 aacgagataaatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgata 73542  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  73543 aatatcccccaaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagtt 73607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 4877 - 4723
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| ||||||| ||||| |||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||||| |||    
T  4877 ctagattattctgttcggaagaagttagatacacaataccttagggatatggcacaattagtagatagagtccgccaagttgagagacttaaggctaaaa 4778  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactgg 160  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  4777 aagctagaacaaattggttccctaagaaagaaaaagttgcttatatcgacactgg 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 7 - 372
Target Start/End: Original strand, 65702 - 66067
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || ||||| || ||||||||    
T  65702 tagattattctattcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaa 65801  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     |  |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
T  65802 ggtcagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagat 65901  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||| || ||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||| ||||||||||    
T  65902 aacgaaataaatcttgcagaattgaatgatgggccaccttatacttgtaatttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgata 66001  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||| |||| ||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  66002 aatatcccccgaaaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttg 66067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 7 - 370
Target Start/End: Complemental strand, 140423 - 140060
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||| || ||||| ||| |||||||    
T  140423 tagattattctgtttgaaagaaattagatacacaataccttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaagtctgaaaa 140324  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || |||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||    
T  140323 ggccagaacaaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagat 140224  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| ||||||||||| |||||||  ||||| ||||| ||  |  |||||||||||||||||||||| || |||||||||||||||||||    
T  140223 aacgaaataaatcttgcagaattaaaggatgggccgccttatacttgtaagctactaaggccatcaaatgggaaaaacgtagaagaatccaaaaatgata 140124  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 370  Q
    |||||||||| ||||| || ||||| ||||| ||||||||||||||||| ||||||||| ||||    
T  140123 aatatcccccgaaaacgtacactttcgatgtatctaaatgtgaagaaatttttgatcttctagt 140060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 3774 - 4139
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||||||||    
T  3774 ctagattattctgttccaaagaaactagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagttgagagacttaaggctgaaa 3873  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| | ||||||||||| | || |||||||| || ||    
T  3874 aagccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactagagatagtgagccagaattcgattggtgatcagattctgttgatga 3973  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || |||||||||||||||||||||||||||||| |  ||||| ||||| || ||  |||||||||| |||||||||||| | |||||| | |||||||||    
T  3974 taacgaaataaatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccatcgaatgggaaaaatttagaagaacctaaaaatgat 4073  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    || |||||||| ||||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
T  4074 aagtatcccccgaaaacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 4139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 7 - 371
Target Start/End: Complemental strand, 39053 - 38690
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||    
T  39053 tagattattctgttcgaaagaa-ttagacacccaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaa 38955  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     |  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||| || |||| |||||||||     
T  38954 ggacagaacaaataggttccctaagaaagagaaagtcgcttatatcgatactggagatagtgagccagaattcgattggggatcagattatgtagaagac 38855  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| || ||| | |||||||||| |||||||||||| ||| | || |||||||| ||| ||||||| || || ||| ||||||| ||||    
T  38854 aacgaaataaatcttgcggaactgaaagatgggccaccttacacttgtaaagtattgaggccatcgaattggaaaaacgtagaggaacccaaaaacgata 38755  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
T  38754 aatatcccccaaaaacttacacttttgacgtgtctaaatgcgaagaaatatttgatcttctagtt 38690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 7 - 372
Target Start/End: Complemental strand, 6999 - 6634
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||  | |||||||| || ||||| || ||||||||    
T  6999 tagattattctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagtagataggattcgccaagtcgagagacttaaagctgaaaa 6900  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
     || |||||||||||||||||||||||||| ||||| |||||| |||| | ||| |||||||||| | ||||| ||||||| ||  ||||||| ||||||    
T  6899 ggccagaacaaataggttccctaagaaagaaaaagtcgcttatgtcgacattggagatagtgagccagaattcaattggggatccaattctgttgaagat 6800  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    | |||||||||||| |||||||| |||||||||| |||||| ||||| || || ||||||| ||||||||| ||||| || |||||||| |||| |||||    
T  6799 aacgaaataaatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggctatcaaatggaaaaaacgtagaagaatctaaaattgata 6700  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 372  Q
    |||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||| ||||||    
T  6699 aatatcccccgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttg 6634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 6 - 371
Target Start/End: Complemental strand, 160528 - 160163
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||| |||||| || ||||| || || ||||    
T  160528 ctagattattctgttcgaaagaagttagatacacaatatcttagggatatgacacaattagcatatagagtccaccaagtcgagagacttaaagcagaaa 160429  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| | ||||| ||||||| || |||||||| || ||    
T  160428 aagccagaacaaataggtttcctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcaattggggatcagattctgttgatga 160329  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || ||||||||||||||||||||||||||||||||  ||||| ||||| || ||  |||||||||| |||||||||||| |  ||||| | |||||||||    
T  160328 taacgaaataaatctcgcagaattaaaagatgggccgccttatacttgtaagttactaaggccatcgaatgggaaaaatataaaagaacctaaaaatgat 160229  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||||||||| ||||| || ||||||| ||| |||||||||||||| || ||||||||| |||||    
T  160228 aaatatcccccgaaaacatacacttttgctgtatctaaatgtgaagagatttttgatcttctagtt 160163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 182; Significance: 3e-98; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 3835 - 4200
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| ||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  3835 ctagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaa 3934  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    |||| | |||||||||||||||||||||| | ||||||||||||||||||||| | |||||||||| | ||||||||||||| ||||||| ||| || ||    
T  3935 aagccaaaacaaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatctgattatgttgatga 4034  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || |||||||||||||||||||||||||||||| |  ||||| ||||| || ||  || ||||||||||||| |||||| | |||||| | || ||||||    
T  4035 taacgaaataaatctcgcagaattaaaagatggaccgccttatacttgtaagttactacggccatcaaatggaaaaaatatagaagaacctaagaatgat 4134  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    | ||||||||| ||||| || ||||||||||| |||||||| ||||| || ||||||||| |||||    
T  4135 acatatcccccgaaaacatacacttttgatgtatctaaatgcgaagagatttttgatcttctagtt 4200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 6 - 314
Target Start/End: Original strand, 32484 - 32791
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||| ||| ||||||| || || |||||| |||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||| ||||||||||    
T  32484 ctagactattctgttcgcaaaaagttagatgcacaatatcttagggatatggcacaattagcagatag-gtcctccaagttgaaagacttaaggctgaaa 32582  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    | || |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||| ||| ||||||||||| || ||    
T  32583 aggccagaacaaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattagggatctgattctgttgatga 32682  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || |||||||||||||| |||||||||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||| | |||||| | || ||||||    
T  32683 taacgaaataaatctcgtagaattaaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaagaacctaagaatgat 32782  T
Q  306 aaatatccc 314  Q
    |||||||||    
T  32783 aaatatccc 32791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 138; Significance: 5e-72; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 7 - 188
Target Start/End: Original strand, 280 - 461
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  280 tagattattctgttcgaaagaaattagatacaaaatatcttagggacatggcgcaattagcagatagagttcgccaagtggaaagactcaaggctgaaaa 379  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggt 188  Q
    ||| |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  380 agccagaacagataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccagaattcgattggggt 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 6 - 371
Target Start/End: Complemental strand, 180765 - 180400
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| |||| |||||||| || || || |||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||| || || |||||||    
T  180765 ctagattattctgtccgaaagaagttggacactcaatatcttagggatatggcacaattggcaaatagagtccgacaagttgaaaggcttaaagctgaaa 180666  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    | || || |||||||| ||||||||||| ||||||||||||||  | |||||||| || |||||   | |||||||||||||||| ||| |||| |||||    
T  180665 aggccaggacaaatagattccctaagaaggagaaagttgcttacgtagatactggtgacagtgacgcataattcgattggggttccgatactgtcgaaga 180566  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || ||| |||||||||||||||||||||||||||| ||| || || ||||| || ||||||||||||||||| |||||    |||||| | || |||||     
T  180565 taacgagataaatctcgcagaattaaaagatgggccaccatatacctgcaagttattaaggccatcaaatggaaaaaacccagaagaaccaaagaatgac 180466  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    |||||||| || ||||| || ||||| ||||| |||||||| ||||| || ||||||||| |||||    
T  180465 aaatatcctcctaaaacatacactttcgatgtttctaaatgcgaagagatctttgatcttctagtt 180400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 305
Target Start/End: Original strand, 13226 - 13501
Alignment:
Q  30 ttagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaataggttcccta 129  Q
    |||||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||    
T  13226 ttagatacacaacatcttagggatatggcacaattggcagatagagtccgccaagttgaaaggcttaaggctgaaaaagccaggacaaataggttcccta 13325  T
Q  130 agaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaatt 229  Q
    ||||||| || ||||||||||||||  |||| |||||||| | | |||| |||||||| || ||  | || || |||| | ||||||||||||| |||||    
T  13326 agaaagaaaaggttgcttatatcgacgctggagatagtgatccagaatttgattggggatccgaggcggttgatgataacaaaataaatctcgccgaatt 13425  T
Q  230 aaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
     ||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||||| |||||| |||||||||||    
T  13426 gaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatgtagaagaacccaaaaatgat 13501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 8620 - 8813
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||| | || ||||||||    
T  8620 tagattattctattcgaaagaaattagatacacaatatcttagggacatggcgcagttagcagatagggttcgccaagtcgagagagttaatgctgaaaa 8719  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgta 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||| || |||| ||||    
T  8720 agccagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccggaattcgattggggatcagattttgta 8813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 122; Significance: 2e-62; HSPs: 6)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 6 - 371
Target Start/End: Original strand, 146524 - 146889
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| | || |||||||| || ||||| ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || ||||||||||    
T  146524 ctagattattcggtccgaaagaagttggatacccaataccttagggatatggcataattggcagatagagtccgacaagttgaaaggcttaaggctgaaa 146623  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    | || || |||||||| |||||||||||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||| ||| || | |||||    
T  146624 aggccaggacaaatagattccctaagaaagagaaagttgcttacattgatactggagacaatgacccataatttgattggggttccgatactctcgaaga 146723  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    || ||| |||||||||||||||||||||||||||| ||| || || ||  | ||  |||||||||||||||| || ||    |||||| | || |||||     
T  146724 taacgagataaatctcgcagaattaaaagatgggccaccatatacctgttagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgac 146823  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    |||||||| || ||||| || ||||||||||| |||||||| ||||| || ||||||||| |||||    
T  146824 aaatatcctcctaaaacatacacttttgatgtttctaaatgcgaagagatctttgatcttctagtt 146889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 371
Target Start/End: Original strand, 82529 - 82878
Alignment:
Q  22 gaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatag 121  Q
    ||||||| || ||||| ||||| |||||||| ||||| ||||| |||| ||||||||| ||||||||||| || ||||||||||| || || ||||||||    
T  82529 gaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaaggccaggacaaatag 82628  T
Q  122 gttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctc 221  Q
     ||||||| |||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||  ||| || |  |||||| ||| |||||||||    
T  82629 attccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagataacgagataaatctc 82728  T
Q  222 gcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaa 321  Q
    ||||||||||||||||||| ||| || || || || ||  |||||||||||||||| || ||    |||||| | || ||||| |||||||| || ||||    
T  82729 gcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgacaaatatcctcctaaaa 82828  T
Q  322 cttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    | || || || ||||| |||||||| ||||| || ||| ||||| |||||    
T  82829 catacaccttagatgtttctaaatgcgaagagatctttcatcttctagtt 82878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 371
Target Start/End: Original strand, 120201 - 120550
Alignment:
Q  22 gaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatag 121  Q
    ||||||| || ||||| ||||| |||||||| ||||| ||||| |||| ||||||||| ||||||||||| || ||||||||||| || || ||||||||    
T  120201 gaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaaggccaggacaaatag 120300  T
Q  122 gttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctc 221  Q
     ||||||| |||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||  ||| || |  |||||| ||| |||||||||    
T  120301 attccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagataacgagataaatctc 120400  T
Q  222 gcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaa 321  Q
    ||||||||||||||||||| ||| || || || || ||  |||||||||||||||| || ||    |||||| | || ||||| |||||||| || ||||    
T  120401 gcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgacaaatatcctcctaaaa 120500  T
Q  322 cttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    | || || || ||||| |||||||| ||||| || ||| ||||| |||||    
T  120501 catacaccttagatgtttctaaatgcgaagagatctttcatcttctagtt 120550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 127 - 371
Target Start/End: Original strand, 147685 - 147929
Alignment:
Q  127 ctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcaga 226  Q
    |||||||||||||||||||||| || |||||||| || ||||| | | ||||||||| |||||| ||| || | ||||||| ||| ||||||||||||||    
T  147685 ctaagaaagagaaagttgcttacattgatactggagacagtgacccagaattcgattagggttccgatactctcgaagataacgagataaatctcgcaga 147784  T
Q  227 attaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttat 326  Q
    |||||||||||||| ||| || || || || ||  |||||||||||||||| |||||    |||||| | || ||||| |||||||| || ||||| ||     
T  147785 attaaaagatgggccaccatatacctgaaagttaataaggccatcaaatggaaaaaacccagaagaaccaaagaatgacaaatatcctcctaaaacatac 147884  T
Q  327 acttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    ||||| ||||| |||||||| ||||| || ||||||||| |||||    
T  147885 actttcgatgtttctaaatgcgaagagatctttgatcttctagtt 147929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 133279 - 133404
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| | || |||||||| || ||||  ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || ||||||||||    
T  133279 ctagattattcggtccgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaa 133378  T
Q  106 aagctagaacaaataggttccctaag 131  Q
    | || || |||||||| |||||||||    
T  133379 aggccaggacaaatagattccctaag 133404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 137808 - 137933
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| | || |||||||| || ||||  ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || ||||||||||    
T  137808 ctagattattcggtccgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaa 137907  T
Q  106 aagctagaacaaataggttccctaag 131  Q
    | || || |||||||| |||||||||    
T  137908 aggccaggacaaatagattccctaag 137933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 30 - 371
Target Start/End: Complemental strand, 43717 - 43376
Alignment:
Q  30 ttagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaataggttcccta 129  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||| | |||||  |||| || ||||| |||||||| || ||||||||||| |||     
T  43717 ttagatacacaatatcttagggatatggtacaattagcagatagagtctggcaagtcaaaagccttaaggccgaaaaagccaggacaaataggtttcctt 43618  T
Q  130 agaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaatt 229  Q
    ||||||| || ||||||||||||| |||||| || || || | | ||||||||||||| |||||| |||| || |||| ||| |||||||| |||||||     
T  43617 agaaagaaaaggttgcttatatcgttactggagacagcgacccagaattcgattggggatctgatactgtcgatgataacgagataaatcttgcagaatc 43518  T
Q  230 aaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatact 329  Q
    |||||||||||  || || ||||| || ||  |||||||||||||||| || |||   |||||| | || |||||||||||||| |||||||| || |||    
T  43517 aaaagatgggccgccctatacttgtaagttactaaggccatcaaatggaaagaatcctgaagaagcaaagaatgataaatatcctccaaaaacatacact 43418  T
Q  330 tttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    |||||| | |||||||| ||||| || ||||||||| |||||    
T  43417 tttgatttatctaaatgcgaagagatttttgatcttctagtt 43376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 6 - 370
Target Start/End: Complemental strand, 69129 - 68765
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| ||||||||||||| || || || |||||||||||||| ||||| ||| | ||||| |||||||| ||||| ||||| || | |||||| |    
T  69129 ctagattattctgttcgaaagaagttggacactcaatatcttagggatatggcacaagtggcagacagagtccgacaagtcgaaaggcttatggctgaga 69030  T
Q  106 aagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaaga 205  Q
    ||||  | |||||||| ||||||||||| || |||||||| ||  | ||||| || || | ||| | | ||||||||||||| || ||| |||| |||||    
T  69029 aagcccggacaaatagattccctaagaaggaaaaagttgcctacgtggataccggagacaatgacccataattcgattgggggtcagatactgtcgaaga 68930  T
Q  206 tagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 305  Q
    ||  ||||||||||||||||| ||||||||||||| |||||| |  |||||||| ||||||||||||||||| |||||    |||||| | ||||||||     
T  68929 taatgaaataaatctcgcagagttaaaagatgggccaccttataactgcaaattattaaggccatcaaatggaaaaaaccctgaagaacctaaaaatgac 68830  T
Q  306 aaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 370  Q
    |||||| | || ||||| |||||||| ||||| |||||||||||||| || || |||||||||||    
T  68829 aaatattctcctaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatcttttagt 68765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 7 - 352
Target Start/End: Complemental strand, 135044 - 134699
Alignment:
Q  7 tagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaa 106  Q
    |||| ||| ||||| ||||||| || || || |||||||||||||| || ||||| || ||||| |||| ||| ||||| ||||| || |||||||| ||    
T  135044 tagactattctgtttgaaagaagttggacactcaatatcttagggatatagcgcagttggcagacagagcccgacaagtcgaaaggcttaaggctgagaa 134945  T
Q  107 agctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagat 206  Q
    |||    |||||||||||||||||||| ||||||||| | ||  | ||||||||  | ||||| | | ||||||||||||| || ||| |||| ||||||    
T  134944 agcccagacaaataggttccctaagaaggagaaagtttcctaagtagatactggatacagtgacccagaattcgattggggatcagatactgttgaagat 134845  T
Q  207 agcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgata 306  Q
    |  ||||||||||| ||||||||||||||||||| ||||||  | ||||||||  |||||||||| || || || |||   ||||||   |||||||| |    
T  134844 aatgaaataaatcttgcagaattaaaagatgggccaccttatgcctgcaaattactaaggccatcgaacggaaagaatcctgaagaacttaaaaatgaca 134745  T
Q  307 aatatcccccaaaaacttatacttttgatgtgtctaaatgtgaaga 352  Q
    ||||||| || ||||| |||||||| ||||| ||||||||||||||    
T  134744 aatatcctcctaaaacatatactttcgatgtttctaaatgtgaaga 134699  T

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Target: scaffold0241 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 272 - 372
Target Start/End: Original strand, 10472 - 10572
Alignment:
Q  272 aaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 371  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  10472 aaatggaaaaaatgtagaagagtccaaaaatgataaatatcccccaaaaacttatacttttgatgtatctaagtgtgaagaaatatttgatcttctagtt 10571  T
Q  372 g 372  Q
    |    
T  10572 g 10572  T

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Target: scaffold1714 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1714
Description:

Target: scaffold1714; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 1357 - 1445
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagact 94  Q
    ||||| ||| ||||||| || || ||||||||||||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||    
T  1357 ctagactattctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcggatagaatccgccaagttgaaagact 1445  T

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Target: scaffold0757 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 1880 - 1954
Alignment:
Q  19 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagac 93  Q
    ||||||||||| ||||||| |||||||| || || ||||| |||||||| ||||||||||| |||||||||||||    
T  1880 ttcgaaagaaactagatacgcaatatctcagagatatggcacaattagctgatagagtccgacaagttgaaagac 1954  T

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Target: scaffold0401 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 1397 - 1483
Alignment:
Q  23 aaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 109  Q
    |||||||||||||||||||||||| || || ||||| |||||||| ||||| ||||  ||||| |||||||| || |||||||||||    
T  1397 aaagaaattagatacacaatatctaagagatatggcacaattagctgatagggtccaacaagtcgaaagacttaaagctgaaaaagc 1483  T

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Target: scaffold0401; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 372
Target Start/End: Original strand, 1626 - 1746
Alignment:
Q  252 tgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaag 351  Q
    |||||| | |||| |||||| ||||| ||||||   || ||| | ||||||||||||||| |  | ||||| ||||| ||||||||  | |||||||| |    
T  1626 tgcaaagtattaaagccatctaatggcaaaaatcatgaggaacctaaaaatgataaatatgcatctaaaacatatacatttgatgttaccaaatgtgatg 1725  T
Q  352 aaatatttgatcttttagttg 372  Q
    |||| || |||||||||||||    
T  1726 aaatcttcgatcttttagttg 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 45864 - 45761
Alignment:
Q  6 ctagattatactgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaa 105  Q
    ||||||||| || ||||||||||||||||||   | ||||| || || ||||| ||  ||||||||||||| |  ||||| |||||||| || |||||||    
T  45864 ctagattattctattcgaaagaaattagatatttagtatctaagagatatggcacatctagcagatagagttcaacaagtcgaaagacttaaagctgaaa 45765  T
Q  106 aagc 109  Q
    ||||    
T  45764 aagc 45761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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