View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17043_high_8 (Length: 527)
Name: NF17043_high_8
Description: NF17043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17043_high_8 |
 |  |
|
| [»] scaffold0394 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 357; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 4 - 508
Target Start/End: Original strand, 52173919 - 52174423
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| || |||||||||||||| | ||| || ||| |
|
|
| T |
52173919 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaagtttacctgatggtcgtcaagtggctgttaaagtaataaacgagttaaagggggatg |
52174018 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
52174019 |
gagaagaattcataaatgaagttgctagcattagtagaacatcacacgtgaacattgtgtcacttttaggctattgttatgaggtgaacaaaagagcact |
52174118 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
52174119 |
aatatatgaattcatgcgccaaggatcattggatcagttcatctataaaagtggattttctgaagctgtttgtgattttaattggaacactttgttccaa |
52174218 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
52174219 |
attgcaattggcattgctaaaggactagagtacttgcatcaaggatgtagttcaaggattttgcatcttgatatcaaacctcaaaacattattttggatg |
52174318 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
|||||||||| |||||||| |||||||| |||||||||||||| || ||||||||||||||| |||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
52174319 |
aagacttttgcccaaaaatatctgatttcggactagcaaaaatatgccaaaggaaggatagtgttgtgtcaatacttggcacaagaggaactataggata |
52174418 |
T |
 |
| Q |
504 |
tatgg |
508 |
Q |
| |
|
||||| |
|
|
| T |
52174419 |
tatgg |
52174423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 494
Target Start/End: Original strand, 49710780 - 49710865
Alignment:
| Q |
409 |
ttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaac |
494 |
Q |
| |
|
||||||||||||||||| ||||||||||| || ||||| |||| ||| || || || ||||| |||||| ||||| |||| ||||| |
|
|
| T |
49710780 |
ttttgtccaaaaatttcagattttggacttgctaaaatatgtctaagaaaagaaagcattgtatcaatatttggtgcaaggggaac |
49710865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 488
Target Start/End: Original strand, 49683173 - 49683249
Alignment:
| Q |
412 |
tgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaag |
488 |
Q |
| |
|
|||||||||||||| ||||||||||| || ||||| |||| ||| || || || ||||| |||||| ||||| |||| |
|
|
| T |
49683173 |
tgtccaaaaatttcagattttggacttgctaaaatatgtccaagaaaagaaagcattgtatcaatatttggtgcaag |
49683249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 333; Significance: 0; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 4 - 508
Target Start/End: Complemental strand, 31595677 - 31595173
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31595677 |
gataaattaggccacggaggatatggtgttgtgtacaaagcaagtttaacggatggtcgtcaagtggcagtgaaagtaataaacgagtcaaaaggaaatg |
31595578 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||| |||| |||||||| |||| || ||||||||||| |
|
|
| T |
31595577 |
gggaagagttcataaatgaagttgctagcatcagtagaacatcacacatgaacattgtgtcacttttaggttattgttacgaggcaaataaaagagcact |
31595478 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
||||||||||||||||||| |||||||| | || || |||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
31595477 |
aatatatgagttcatgcccaaaggatcactagacaaattcatctataaaagtggatttcctgacgctgtttgtgattttgattcgaacactttgttccaa |
31595378 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
||| | | |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31595377 |
attgctatcggcattgctagaggtttagagtacttgcatcaaggatgtagttcaaggatactgcatcttgatatcaaacctcaaaacattcttttggacg |
31595278 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
|| ||||||| |||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||| || |||||||||||||||||||| |
|
|
| T |
31595277 |
aaaacttttgcccaaaaatctctgattttggactagcaaaaatatgtcaaatgaatgatagtattgtgtcaataccggggacaagaggaactataggata |
31595178 |
T |
 |
| Q |
504 |
tatgg |
508 |
Q |
| |
|
||||| |
|
|
| T |
31595177 |
tatgg |
31595173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 508
Target Start/End: Complemental strand, 31576623 - 31576116
Alignment:
| Q |
1 |
cgggataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
31576623 |
cgggataaattaggccaaggaggatatggtgttgtttacaaagcaagtttaattgatggtcgtcaagtggcggtgaaagtaataaatgaatccaaaggaa |
31576524 |
T |
 |
| Q |
101 |
atggggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagc |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||| ||||||||||| | |||||||||| |
|
|
| T |
31576523 |
atggagaagaattcataaatgaagttgctagcattagtcgaacatcacacatgaacattgtgtcccttttaggcttttgttatgaggtggacaaaagagc |
31576424 |
T |
 |
| Q |
201 |
actaatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttc |
300 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||||||||||||| ||| |
|
|
| T |
31576423 |
actaatatatgaattcatgcccaatggatcattggataagttcatctataaaagtgaatttcctaacgctatttgtgattttgattggaacactttgttc |
31576324 |
T |
 |
| Q |
301 |
caaattacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttgg |
400 |
Q |
| |
|
||||| || |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31576323 |
caaatagcaattggcattgctagaggtctagagtacttgcaccaaggatgcagttcaaggattctgcatcttgatataaaacctcaaaacattcttttgg |
31576224 |
T |
 |
| Q |
401 |
acgaagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactatagg |
500 |
Q |
| |
|
| || || ||||| |||||||| ||||||||||||||||| ||||| || |||| ||||||||||||||| |||||| | || |||||||||| ||||| |
|
|
| T |
31576223 |
atgatgatttttgcccaaaaatctctgattttggactagcgaaaatatgccaaaagaaggatagtattgtgtcaatattaggggcaagaggaacaatagg |
31576124 |
T |
 |
| Q |
501 |
atatatgg |
508 |
Q |
| |
|
|||||||| |
|
|
| T |
31576123 |
atatatgg |
31576116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 6 - 508
Target Start/End: Complemental strand, 31605284 - 31604782
Alignment:
| Q |
6 |
taaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatggg |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||| |
|
|
| T |
31605284 |
taaattaggccaaggaggatatggtgttgtttacaaagcaagtttaattgatggtcgtcaagtggcggtgaaagtaataaatgaatccaaaggaaatgga |
31605185 |
T |
 |
| Q |
106 |
gaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcactaa |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
31605184 |
gaagaattcataaatgaagttgctagcattagtcgaacatcacacatgaacattgtgtcccttttaggcttttgttatgaggtggacaaaagagcactaa |
31605085 |
T |
 |
| Q |
206 |
tatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaaat |
305 |
Q |
| |
|
||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||||||||||||| |||||||| |
|
|
| T |
31605084 |
tatatgaattcatgcccaatggatcattggataagttcatctataaaagtgaatttcctaacgctatttgtgattttgattggaacactttgttccaaat |
31604985 |
T |
 |
| Q |
306 |
tacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacgaa |
405 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
31604984 |
agcaattggcattgctagaggtctagagtacttgcaccaaggatgcagttcaaggattctgcatcttgatataaaacctcaaaacattcttttggatgat |
31604885 |
T |
 |
| Q |
406 |
gacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggatata |
505 |
Q |
| |
|
|| ||||| |||||||| ||||||||||||||||| ||||| || |||| ||||||||||||||| |||||| | || |||||||||| |||||||||| |
|
|
| T |
31604884 |
gatttttgcccaaaaatctctgattttggactagcgaaaatatgccaaaagaaggatagtattgtgtcaatattaggggcaagaggaacaataggatata |
31604785 |
T |
 |
| Q |
506 |
tgg |
508 |
Q |
| |
|
||| |
|
|
| T |
31604784 |
tgg |
31604782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 4 - 508
Target Start/End: Complemental strand, 31608880 - 31608376
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31608880 |
gataaattaggccatggaggatatggtgttgtgtacaaagcaagtttaacggatggtcgtcaagtggcagtgaaagtaataaacgagtcaaaaggaaatg |
31608781 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| || |||| | ||||||||||| ||| |||||||| || |
|
|
| T |
31608780 |
gggaagagttcataaatgaagttgctagcatcagtagaacatcacacctgaacattgtgtcactcttaggtttttgttatgaggtgaataaaagagcgct |
31608681 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
||||||||| | ||||||| ||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
31608680 |
aatatatgaatacatgcccaaaggatccctggataagttcatctataagagtggatttcctgacgctgtttgtgattttgattggaacactttgttccaa |
31608581 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
|| | | |||||||||||||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31608580 |
gttgctatcggcattgctagaggtctcgagtacttgcatcaaggatgtagttcaaggatactacatcttgatatcaaacctcaaaacattcttttggatg |
31608481 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| |||||||| |||||| | || ||| |||||||||||||||| |
|
|
| T |
31608480 |
aagacttttgtccaaaaatatctgattttggacttgctaaaatatgtcaaaggaaggacagtattgtgtcaatattggggacacgaggaactataggata |
31608381 |
T |
 |
| Q |
504 |
tatgg |
508 |
Q |
| |
|
||||| |
|
|
| T |
31608380 |
tatgg |
31608376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 10 - 508
Target Start/End: Complemental strand, 31618884 - 31618386
Alignment:
| Q |
10 |
ttaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatggggaag |
109 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||| ||| |||| |||||||| |||| |
|
|
| T |
31618884 |
ttaggccaaggagggtatggtgttgtctacaaagcaagtttatataatagtcgtcaagtggcagtgaaagtaataagcgagacaaagggaaatggagaag |
31618785 |
T |
 |
| Q |
110 |
aattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcactaatata |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||| |||| |||||||| || | |||||||||||| |||||||| |
|
|
| T |
31618784 |
aattcataaatgaagttgctagcattagtaggacatcacatatgaacattgtgtcgcttttaggatattgttacgaagagaacaaaagagcgctaatata |
31618685 |
T |
 |
| Q |
210 |
tgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaaattaca |
309 |
Q |
| |
|
||| ||||||||| ||||||||||||||||||||||||| ||||||| ||||||| | || ||||||||||| ||||||||||||| || | |||| || |
|
|
| T |
31618684 |
tgaattcatgcccaaaggatcattggataagttcatctacaaaagtgaatttcctaatgccatttgtgattttgattggaacactttgtttcgaattgca |
31618585 |
T |
 |
| Q |
310 |
cttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacgaagact |
409 |
Q |
| |
|
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| | |
|
|
| T |
31618584 |
attggcattgctaaaggtctagagtacttgcatcaaggatgtagttcaaggattctacatcttgatataaaacctcaaaacattcttttggatgaagatt |
31618485 |
T |
 |
| Q |
410 |
tttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggatatatgg |
508 |
Q |
| |
|
||||||||||||| || |||||||||||||| ||||| || |||||||||||||||||||| |||||| | || ||||||||||||||||||| |||| |
|
|
| T |
31618484 |
tttgtccaaaaatctcagattttggactagctaaaatatgccaaaggaaggatagtattgtgtcaatattaggggcaagaggaactataggatacatgg |
31618386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 4 - 508
Target Start/End: Complemental strand, 31615154 - 31614657
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||||| |||| || ||||| ||||||| |
|
|
| T |
31615154 |
gataaattaggccaaggaggatatggtgttgtgtacaaagcaagtttaattgatggtcgtcatgtggcggtgaaagtactaaatgagtcaaagggaaatg |
31615055 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| |||||| |||||| ||||||||||| ||||||||||||||| |
|
|
| T |
31615054 |
gagaagaattcataaatgaagttgctagcattagtcgaacattacacatgaacattgtatcccttttaggcttttgttatgaggtgaacaaaagagcact |
31614955 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||| |||||||| ||||||| ||||||| | ||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
31614954 |
aatatatgaattcatgtccaaaggatcattggatagtttcatctacaaaagtgaatttcctaatgctatttgtgattttaattggaacactttgttccaa |
31614855 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
||| || ||||||| |||||||| |||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||||||||||||| | |
|
|
| T |
31614854 |
attgcaattggcatcgctagaggtctagagtacttgcatc-------tagctcaaggattctgtatcttgataccaaacctcaaaacattcttttggatg |
31614762 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||||||||| ||||| || |||| ||||||||||||||| |||||| | ||||||||||||||||||||||| |
|
|
| T |
31614761 |
aagatttttgcccaaaaatctctgattttggactagcgaaaatatgccaaaagaaggatagtattgtgtcaatattaggtacaagaggaactataggata |
31614662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 4 - 508
Target Start/End: Complemental strand, 31586030 - 31585526
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||| ||||| |||||||||||||| ||| | || ||||||| |
|
|
| T |
31586030 |
gataaattaggtcaaggaggatatggtgttgtgtacaaagcatgtttaagtgatggtcgtcatgtggcggtgaaagtaataaatgaaactaagggaaatg |
31585931 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || ||| |||||| ||| ||||||| ||||||||||||| | |
|
|
| T |
31585930 |
gagaagaattcataaatgaagtttctagcattagtagaacatcacacatcaacattgtatcacttttaggcttttgctatgaggtgaacaaaagagcatt |
31585831 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
|||||||| |||||| || |||||||||||| |||||| ||||||| ||| ||||||| | ||| | | ||||||| ||||||||||||| |||||| |
|
|
| T |
31585830 |
gatatatgaattcatgtccaaaggatcattgggtaagtttatctatagaagccaatttcctaatgctatatatgattttgattggaacactttgttccaa |
31585731 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
||| || |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
31585730 |
attgcagttggcattgctagaggtttagagtatttgcatcaaggatgtagttcgaggattctgcatcttgatatcaaaccccaaaacattcttttggatg |
31585631 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||| || | || ||||||||||| ||| ||||| || || ||||||||||||||||||| |
|
|
| T |
31585630 |
aagatttttgtccaaaaatatctgattttggactagcaaaaatatgccgaaagaaggatagtactgtgtcaatgctaggggcaagaggaactataggata |
31585531 |
T |
 |
| Q |
504 |
tatgg |
508 |
Q |
| |
|
||||| |
|
|
| T |
31585530 |
tatgg |
31585526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 4 - 506
Target Start/End: Complemental strand, 31541639 - 31541140
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||| ||| | |||||||||||||| ||||||||| | ||||| || || || ||||||| |
|
|
| T |
31541639 |
gataaattaggtcaaggaggatatggtgttgtttacaaagcaaacttacctgatggtcgtcaagtagcagtgaaaattataaatgagtctaagggaaatg |
31541540 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||| | || | |||||||||| |||||||||||||| |
|
|
| T |
31541539 |
gagaagatttcataaatgaagttgctagcattagtagaacatcacatgtgaacattgtctcacttttgggattttgttatgag---aacaaaagagcact |
31541443 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| | | ||| ||||| ||| ||||||| || || | |||| |
|
|
| T |
31541442 |
aatatatgagttcttgcccaaaggatcattggataagttcattcttaaaagtggatttcatgatgctatttgtagtttggattggaagacattgtaccaa |
31541343 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
||| || | || |||||| |||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
31541342 |
attgcaatcggaattgctcgaggactagaatacttgcatcaaggatgtatttcaagaattttgcatcttgatatcaaaccacaaaacattcttttggatg |
31541243 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
|| | ||||| || ||||| ||||||||||||||||| ||| | || |||||||| ||||||||||| || ||||||| |||||||||||||||||||| |
|
|
| T |
31541242 |
aaaatttttgccccaaaatctctgattttggactagctaaagtatgccaaaggaatgatagtattgtgtctttacttggcacaagaggaactataggata |
31541143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 503
Target Start/End: Original strand, 31572452 - 31572947
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
||||||||||| |||||||||||||||| || |||||||||| |||| | |||||| |||||||||| || ||||||||||||||||| || ||| ||| |
|
|
| T |
31572452 |
gataaattaggttaaggaggatatggtgtcgtgtacaaagcaagtttacctgatggttgtcaagtggcggttaaagtaataaacgaatctaagggagatg |
31572551 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| | || | |||||||| ||||||||||||||| |
|
|
| T |
31572552 |
gagaagaattcataaatgaagttgctagcattagtagaacatcacatgtgaacattgtctcacttttgggtttctgttatga---gaacaaaagagcact |
31572648 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
||||||||| |||||||| | || ||| | || |||||||||| |||||||||||||||| || ||||| |||| |||||||||| || | || | |
|
|
| T |
31572649 |
aatatatgaattcatgccaaatggttcactagacaagttcatctttaaaagtggatttcctagtgcactttgtaatttggattggaacacgttgtaccga |
31572748 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
||| || | ||||| ||||||||||| || |||||||| |||||||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||| | |
|
|
| T |
31572749 |
attgcaataggcatagctagaggactcgaatacttgcaacaaggatgtatttcaaggattttgcatcttgatataaaacc-caaaacattcttttggatg |
31572847 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||||||||| |||| || |||||||||||||||||||| || |||||||| ||||| |||||||||||||| |
|
|
| T |
31572848 |
aagatttttgcccaaaaatctctgattttggactagctcaaatatgccaaaggaaggatagtattgtgtccatacttggcacaaggggaactataggata |
31572947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 500
Target Start/End: Original strand, 31438637 - 31439121
Alignment:
| Q |
16 |
caaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatggggaagaattca |
115 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||| | ||||| ||||| || || ||||||||||||| || | || ||| | || |||||||| | |
|
|
| T |
31438637 |
caaggaggatatggtgttgtgtacaaagcaagtttacctgatggccgtcatgttgcggtgaaagtaataagtgagtgcaagggagacggagaagaattta |
31438736 |
T |
 |
| Q |
116 |
taaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcactaatatatgagtt |
215 |
Q |
| |
|
||||||||||||| ||||| |||| ||||||||| ||||||||| || ||| | || | ||||||||| ||||||||| ||| | |||||||| || |
|
|
| T |
31438737 |
taaatgaagttgcaagcataagtaaaacatcacatgtgaacattgtctcacttttgggtttttgttatgaaaagaacaaaagtgcattgatatatgaatt |
31438836 |
T |
 |
| Q |
216 |
catgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaaattacacttggc |
315 |
Q |
| |
|
|||| || | || ||||| ||||||||||| ||||||||||||||||| | ||| |||||||||| |||||||||| | ||||| ||| || || || |
|
|
| T |
31438837 |
catgtccaatgggtcattagataagttcatatataaaagtggatttccaaatgctatttgtgatttggattggaacacaatgttccatattgcaattagc |
31438936 |
T |
 |
| Q |
316 |
attgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacgaagacttttgtc |
415 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
31438937 |
attgctagaggactagagtacttacatcaaggttgtatttcaagaattttgcatcttgatatcaaacctcaaaacattcttttagatgaagatttttgtc |
31439036 |
T |
 |
| Q |
416 |
caaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactatagg |
500 |
Q |
| |
|
||||||| ||||||||||| ||||| ||||| ||||||| ||| || ||| ||||||| ||||||| ||||||||||||||||| |
|
|
| T |
31439037 |
caaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagagtgttgtttccctacttggcacaagaggaactatagg |
31439121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 16 - 394
Target Start/End: Complemental strand, 31532970 - 31532595
Alignment:
| Q |
16 |
caaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatggggaagaattca |
115 |
Q |
| |
|
||||||||||||||| | || |||||||||| ||| | ||||||||| ||||||| ||||||||||||||||| ||||| |||||| | |||||||||| |
|
|
| T |
31532970 |
caaggaggatatggtatggtttacaaagcaaacttacctgatggtcgtgaagtggcggtgaaagtaataaacgagtcaaagggaaatagagaagaattca |
31532871 |
T |
 |
| Q |
116 |
taaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcactaatatatgagtt |
215 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||| || || ||| | || | ||| |||||| ||||||||||||||||||||||| || |
|
|
| T |
31532870 |
caaatgaagttgcaagcattagtagaacatcacatgtgaacatcgtttcacttttgggtttttgctatgag---aacaaaagagcactaatatatgaatt |
31532774 |
T |
 |
| Q |
216 |
catgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaaattacacttggc |
315 |
Q |
| |
|
|||| || ||||||||| ||||| |||||| |||||||| || ||| | ||| ||||| ||| |||||||| | || | ||||||| || | ||| |
|
|
| T |
31532773 |
catgtccagaggatcattagataaattcatcctcaaaagtgggttgcctgatgctatttgtagtttagattggaacgcattgtaccaaattgcaatcggc |
31532674 |
T |
 |
| Q |
316 |
attgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattc |
394 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
31532673 |
attgctcaaggactagaatacttgcatcaaggatgtaattcaaggattttgcatcttgatatcaaaccacaaaacattc |
31532595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 4 - 293
Target Start/End: Original strand, 33304777 - 33305068
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||||||||| || || || ||||||| |
|
|
| T |
33304777 |
gataaattaggtcaaggaggatatggtgttgtgtacaaagcaagcttacctgatggtcgtcaagtggcagtgaaagtaataaaagagtccaagggaaatg |
33304876 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatca---caca--cgaacattgtgtcccttgtaggctattgttatgaggggaacaaaaga |
198 |
Q |
| |
|
| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| || ||| | || | ||||||||| |||||||||| |
|
|
| T |
33304877 |
gagaagaatttataaatgaagttgctagcattagtagaacgtcacgtcacatgtgaacattgtctcacttttgggtttttgttatga---gaacaaaaga |
33304973 |
T |
 |
| Q |
199 |
gcactaatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacac |
293 |
Q |
| |
|
|| || |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||| |||| | ||| |||||||||| |||||||||| |
|
|
| T |
33304974 |
gctctgatatatgaattcatgcccaaaggatcattggataagttcatccatataagtggatctcctgatgctatttgtgatttggattggaacac |
33305068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 347 - 503
Target Start/End: Original strand, 33305100 - 33305256
Alignment:
| Q |
347 |
gatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacgaagacttttgtccaaaaatttctgattttggactagcaaaaat |
446 |
Q |
| |
|
|||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||| |||| ||||| |||||||| || |||||||||||||| |||| |
|
|
| T |
33305100 |
gatgtatttcaaggattttgcatcttgatgtcaaaccccaaaacattcttttggattaagatttttgcccaaaaatctcagattttggactagctcaaat |
33305199 |
T |
 |
| Q |
447 |
ttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactataggata |
503 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
33305200 |
atgtcaaaggaaggatagcattgtatccatacttggtacaagaggaactataggata |
33305256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 21898213 - 21898334
Alignment:
| Q |
325 |
ggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacgaagacttttgtccaaaaattt |
424 |
Q |
| |
|
||||| || |||||||||||||||||| ||| |||||| ||||||| |||||||| || || |||||||| |||| || || ||||| |||||||| |
|
|
| T |
21898213 |
ggactggactacttgcatcaaggatgtgcttcgaggattgtgcatctggatatcaagccccacaacattctgctggatgatgatttttgcccaaaaatcg |
21898312 |
T |
 |
| Q |
425 |
ctgattttggactagcaaaaat |
446 |
Q |
| |
|
||||||||||||| || ||||| |
|
|
| T |
21898313 |
ctgattttggactggcgaaaat |
21898334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 4 - 500
Target Start/End: Original strand, 15062972 - 15063468
Alignment:
| Q |
4 |
gataaattaggccaaggaggatatggtgttgtatacaaagcaattttatccgatggtcgtcaagtggcagtgaaagtaataaacgaatcaaaaggaaatg |
103 |
Q |
| |
|
||||| || ||||||||||||||||||||||| |||||||| | |||| | ||||| ||||| || || |||||||| |||| ||| | || ||||| | |
|
|
| T |
15062972 |
gataagttgggccaaggaggatatggtgttgtttacaaagccagtttacctgatggccgtcatgtagcggtgaaagtgataagcgagtgcaagggaaacg |
15063071 |
T |
 |
| Q |
104 |
gggaagaattcataaatgaagttgctagcattagtagaacatcacacacgaacattgtgtcccttgtaggctattgttatgaggggaacaaaagagcact |
203 |
Q |
| |
|
| |||||||| |||||||||||||| ||||| | | ||||||||| | |||| |||| || ||| | || | |||||||||| ||||||||||||| | |
|
|
| T |
15063072 |
gagaagaatttataaatgaagttgcaagcataacaaaaacatcacatatgaacgttgtttcacttttgggtttttgttatgagaagaacaaaagagcatt |
15063171 |
T |
 |
| Q |
204 |
aatatatgagttcatgccccaaggatcattggataagttcatctataaaagtggatttcctcaagctgtttgtgattttcattggaacacttttttccaa |
303 |
Q |
| |
|
|||||||| |||||| || | |||||||| ||||||||||| || |||||||||||||| | ||| |||||||||| |||||||||| || |||||| |
|
|
| T |
15063172 |
gatatatgaattcatgtccaatggatcattagataagttcatatacaaaagtggatttccaaatgctatttgtgatttggattggaacacattattccaa |
15063271 |
T |
 |
| Q |
304 |
attacacttggcattgctagaggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacg |
403 |
Q |
| |
|
|| | ||||||||||| |||| |||||||| || |||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||| || | |
|
|
| T |
15063272 |
atcgtaattggcattgctcgaggtctagagtatttacatcaaggttgtatttcaagaattttgcatcttgatatcaaacctcaaaacattcttttagatg |
15063371 |
T |
 |
| Q |
404 |
aagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaagaggaactatagg |
500 |
Q |
| |
|
|||| ||||| |||||||| ||||||||||| || || ||||| ||||||| ||| || ||| |||| || || ||||| ||||||||||||||||| |
|
|
| T |
15063372 |
aagatttttgcccaaaaatatctgattttggtcttgctaaaatatgtcaaaagaaagagagtgttgtgtccatgcttgggacaagaggaactatagg |
15063468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 492
Target Start/End: Complemental strand, 29084098 - 29083976
Alignment:
| Q |
371 |
ttgatatcaaacctcaaaacattcttttggacgaagacttttgtccaaaaatttct--gattttggactagcaaaaatttgtcaaaggaaggatagtatt |
468 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || || ||||| ||||||| ||| |||||||||||||| ||||| |||||| ||| |||||||| |
|
|
| T |
29084098 |
ttgatatcaaaccccaaaacattcttttggatgacgatttttg-ccaaaaaaatctaagattttggactagctaaaatatgtcaagagaatcatagtatt |
29084000 |
T |
 |
| Q |
469 |
gtttcaatacttggtacaagagga |
492 |
Q |
| |
|
|| || |||||||| |||| |||| |
|
|
| T |
29083999 |
gtgtctatacttggcacaatagga |
29083976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0394 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0394
Description:
Target: scaffold0394; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 500
Target Start/End: Complemental strand, 2177 - 2066
Alignment:
| Q |
389 |
acattcttttggacgaagacttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaaggatagtattgtttcaatacttggtacaag |
488 |
Q |
| |
|
|||||||||| || ||||| ||||| |||||||| ||||||||||| || || ||||| ||||||| ||| || ||| |||| || || ||||| ||||| |
|
|
| T |
2177 |
acattcttttagatgaagatttttgcccaaaaatatctgattttggtcttgctaaaatatgtcaaaagaaagagagtgttgtgtccatgcttgggacaag |
2078 |
T |
 |
| Q |
489 |
aggaactatagg |
500 |
Q |
| |
|
|||||||||||| |
|
|
| T |
2077 |
aggaactatagg |
2066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 31189709 - 31189590
Alignment:
| Q |
325 |
ggactagagtacttgcatcaaggatgtagttcaaggattctgcatcttgatatcaaacctcaaaacattcttttggacgaagacttttgtccaaaaattt |
424 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| ||| | ||| | || || ||||| || ||||||||||| || || | || ||||||||||||| |
|
|
| T |
31189709 |
ggactagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaattt |
31189610 |
T |
 |
| Q |
425 |
ctgattttggactagcaaaa |
444 |
Q |
| |
|
| ||||||||||| |||||| |
|
|
| T |
31189609 |
cagattttggacttgcaaaa |
31189590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 444
Target Start/End: Complemental strand, 31145597 - 31145532
Alignment:
| Q |
379 |
aaacctcaaaacattcttttggacgaagacttttgtccaaaaatttctgattttggactagcaaaa |
444 |
Q |
| |
|
||||| || ||||||||||| || ||| |||| |||||||| ||||| ||||||||||| |||||| |
|
|
| T |
31145597 |
aaaccacataacattcttttagatgaaaacttatgtccaaagatttcagattttggacttgcaaaa |
31145532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 444
Target Start/End: Complemental strand, 31171910 - 31171845
Alignment:
| Q |
379 |
aaacctcaaaacattcttttggacgaagacttttgtccaaaaatttctgattttggactagcaaaa |
444 |
Q |
| |
|
||||| || ||||||||||| || ||| |||| |||||||| ||||| ||||||||||| |||||| |
|
|
| T |
31171910 |
aaaccacataacattcttttagatgaaaacttatgtccaaagatttcagattttggacttgcaaaa |
31171845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 458
Target Start/End: Complemental strand, 31201432 - 31201383
Alignment:
| Q |
409 |
ttttgtccaaaaatttctgattttggactagcaaaaatttgtcaaaggaa |
458 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||| |||||| |||||| |
|
|
| T |
31201432 |
ttttgtccaaagatttcagattttggacttgcaaaactttgtccaaggaa |
31201383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 443
Target Start/End: Original strand, 30955236 - 30955308
Alignment:
| Q |
371 |
ttgatatcaaacctcaaaacattcttttggacgaagacttttgtccaaaaatttctgattttggactagcaaa |
443 |
Q |
| |
|
||||||| ||||| || ||||||||||| || ||| | || |||||||| ||||| ||||||||||| ||||| |
|
|
| T |
30955236 |
ttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaa |
30955308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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