View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17043_low_5 (Length: 601)

Name: NF17043_low_5
Description: NF17043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17043_low_5
NF17043_low_5
[»] scaffold0598 (1 HSPs)
scaffold0598 (50-585)||(6877-7410)
[»] chr4 (3 HSPs)
chr4 (49-98)||(26207364-26207414)
chr4 (49-98)||(22681578-22681628)
chr4 (50-98)||(48406386-48406435)
[»] chr1 (9 HSPs)
chr1 (49-98)||(9347551-9347601)
chr1 (47-98)||(1176720-1176772)
chr1 (63-98)||(19007738-19007773)
chr1 (49-98)||(44911028-44911079)
chr1 (63-98)||(49318181-49318216)
chr1 (49-98)||(17518602-17518652)
chr1 (49-98)||(20371353-20371403)
chr1 (49-98)||(27172119-27172169)
chr1 (50-98)||(20480613-20480662)
[»] chr3 (3 HSPs)
chr3 (50-98)||(8315083-8315132)
chr3 (49-98)||(42672981-42673031)
chr3 (48-98)||(20969018-20969070)
[»] chr7 (4 HSPs)
chr7 (63-98)||(27096050-27096085)
chr7 (63-98)||(27182218-27182253)
chr7 (50-98)||(6908485-6908534)
chr7 (49-107)||(10533028-10533088)
[»] chr6 (5 HSPs)
chr6 (49-99)||(3825529-3825580)
chr6 (49-98)||(29074372-29074422)
chr6 (49-98)||(29079136-29079186)
chr6 (49-98)||(29106945-29106995)
chr6 (47-98)||(10039679-10039731)
[»] chr2 (3 HSPs)
chr2 (49-103)||(16911269-16911324)
chr2 (49-98)||(19141447-19141497)
chr2 (63-98)||(41790927-41790963)
[»] scaffold0110 (1 HSPs)
scaffold0110 (49-98)||(45807-45857)
[»] scaffold0069 (1 HSPs)
scaffold0069 (49-98)||(50507-50557)
[»] chr5 (5 HSPs)
chr5 (49-98)||(22428937-22428987)
chr5 (49-98)||(22729440-22729490)
chr5 (49-98)||(37610205-37610255)
chr5 (49-98)||(37780323-37780373)
chr5 (50-98)||(9665828-9665876)


Alignment Details
Target: scaffold0598 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 50 - 585
Target Start/End: Original strand, 6877 - 7410
Alignment:
Q  50 gggtgcaaaatgaacaattggcaaaatataggggggaaagtgcaattaatcttagaaaatatttatgctcaa-cttttagtgnnnnnnnttgctacaatt 148  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||       |||||||||||    
T  6877 gggtgcaaaatgcacaattggcaaaagataggggggaaagtgcaattaagcttagaaaatatttatgctcaaacttttagtgaaaaaaattgctacaatt 6976  T
Q  149 tttaatacatttctaccaataaaatcattaatatttcccttaagaacaaatgttagtattttctatattttatacttttgtttcatattattacattaat 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  6977 tttaatacatttctaccaataaaatcattaatatttcccttaagaacaaatgttagtattttcaatattttatactttggtttcatattattacattaat 7076  T
Q  249 ttcagacatcgccaacatcataattacatgaccaccagtcaatattattaattaggaacttgttaaactttggtttagatggcatccacacagttcccat 348  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||   |||||||||||||| |||||||||||||    
T  7077 ttcagacatcgccaacatcataattacttgaccaccagtcaatattattaattaggaacctgttaaact---gtttagatggcatctacacagttcccat 7173  T
Q  349 tatataaaccttaaactcttttcaacttgaaatcaacagagcttgaaaacactctccaactccagtatacattattacatatgccacgtttaagattaag 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  7174 tatataaaccttaaactcttttcaacttgaaatcaacagagcttgaaaacactctccaactccagtatacataattacatatgccacatttaagattaag 7273  T
Q  449 aagaagctccatgaaattgaaaacacaaatcccccactctgatcactcaccctcaaaaagcacaactcccagcgactccttctcctttccgagcaccccg 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7274 aagaagctccatgaaattgaaaacacaaatcccccactctgatcactcaccctcaaaaagcacaactcccagcgactccttctcctttccgagcaccccg 7373  T
Q  549 aacaaagaagaatccgacttcgaattcgggtccctaa 585  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7374 aacaaagaagattccgacttcgaattcgggtccctaa 7410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 26207414 - 26207364
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  26207414 ggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaa 26207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 22681628 - 22681578
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | ||||||| ||||| ||||||||||||||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaa 22681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 48406386 - 48406435
Alignment:
Q  50 gggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    ||||||||||| | |||||||||||| ||||||||||||||| |||||||    
T  48406386 gggtgcaaaatcgcacaattggcaaattataggggggaaagtacaattaa 48406435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 9347551 - 9347601
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  9347551 ggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaa 9347601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 1176772 - 1176720
Alignment:
Q  47 gaggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    ||||| |||||||| | |||||| |||||||||||||||||||||||||||||    
T  1176772 gagggatgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaa 1176720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 98
Target Start/End: Complemental strand, 19007773 - 19007738
Alignment:
Q  63 acaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| |||||||||||||||||||||||    
T  19007773 acaattggcaaactataggggggaaagtgcaattaa 19007738  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 44911079 - 44911028
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatatagg-ggggaaagtgcaattaa 98  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||||||    
T  44911079 ggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaa 44911028  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 49318181 - 49318216
Alignment:
Q  63 acaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| |||||||||||||||||||||||    
T  49318181 acaattggcaaactataggggggaaagtgcaattaa 49318216  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 17518602 - 17518652
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | ||||||||||||| |||||||| |||||||||||||    
T  17518602 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaa 17518652  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 20371353 - 20371403
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  20371353 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 20371403  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 27172169 - 27172119
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  27172169 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 27172119  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 20480613 - 20480662
Alignment:
Q  50 gggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    ||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 20480662  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 8315083 - 8315132
Alignment:
Q  50 gggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaa 8315132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 42673031 - 42672981
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  42673031 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 42672981  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 20969018 - 20969070
Alignment:
Q  48 aggggtgcaaaat-gaacaattggcaaaatatagggggg-aaagtgcaattaa 98  Q
    ||||||||||||| | ||||||||||||| ||||||||| |||||||||||||    
T  20969018 aggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 20969070  T

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Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 98
Target Start/End: Complemental strand, 27096085 - 27096050
Alignment:
Q  63 acaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||| |||||||||||||||||||||||||||||    
T  27096085 acaattagcaaaatataggggggaaagtgcaattaa 27096050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 27182218 - 27182253
Alignment:
Q  63 acaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||| |||||||||||||||||||||||||||||    
T  27182218 acaattagcaaaatataggggggaaagtgcaattaa 27182253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  50 gggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    ||||||||||| | |||||| |||||| ||||||||||||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 10533088 - 10533028
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatatagggggg-aaagtgcaattaatcttagaaa 107  Q
    |||||||||||| | |||||||||||| |||||||||| ||||||||||||| | ||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctagaaa 10533028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 3825580 - 3825529
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaat 99  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaat 3825529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 29074372 - 29074422
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| |||||||||||||| ||||||||    
T  29074372 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaa 29074422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 29079136 - 29079186
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| |||||||||||||| ||||||||    
T  29079136 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaa 29079186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 29106945 - 29106995
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| |||||||||||||| ||||||||    
T  29106945 ggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaa 29106995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 10039731 - 10039679
Alignment:
Q  47 gaggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||||| | |||||| |||||| |||||||| |||||||||||||    
T  10039731 gaggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaa 10039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 16911269 - 16911324
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaatctta 103  Q
    |||||||||||| | |||||||||||| |||||||| |||||||||||||| ||||    
T  16911269 ggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaagctta 16911324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 19141497 - 19141447
Alignment:
Q  49 ggggtgcaaaatgaacaattggcaaaatataggggg-gaaagtgcaattaa 98  Q
    ||||||||||||| |||||||||||| |||||||||  |||||||||||||    
T  19141497 ggggtgcaaaatgcacaattggcaaactatagggggaaaaagtgcaattaa 19141447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 41790927 - 41790963
Alignment:
Q  63 acaattggcaaaatatagggggg-aaagtgcaattaa 98  Q
    ||||||||||||||||||||||| |||||||||||||    
T  41790927 acaattggcaaaatataggggggaaaagtgcaattaa 41790963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 45807 - 45857
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | ||||||||||||| |||||||| |||||||||||||    
T  45807 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaa 45857  T

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Target: scaffold0069 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 50507 - 50557
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  50507 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaa 50557  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000005; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 22428987 - 22428937
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||| |||||| ||||||||||||||||||||||    
T  22428987 ggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 22428937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 22729440 - 22729490
Alignment:
Q  49 ggggtgcaaaat-gaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  22729440 ggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaa 22729490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 37610255 - 37610205
Alignment:
Q  49 ggggtgcaaaatga-acaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  37610255 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaa 37610205  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 37780373 - 37780323
Alignment:
Q  49 ggggtgcaaaatga-acaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||    
T  37780373 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaa 37780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 9665828 - 9665876
Alignment:
Q  50 gggtgcaaaatgaacaattggcaaaatataggggggaaagtgcaattaa 98  Q
    |||||||||||| |||||| |||||| |||||||| |||||| ||||||    
T  9665828 gggtgcaaaatgcacaattagcaaaagatagggggaaaagtggaattaa 9665876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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