View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17044_low_3 (Length: 412)

Name: NF17044_low_3
Description: NF17044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17044_low_3
NF17044_low_3
[»] chr3 (41 HSPs)
chr3 (20-395)||(16800482-16800860)
chr3 (13-296)||(15614436-15614719)
chr3 (13-217)||(15575417-15575621)
chr3 (225-347)||(20248052-20248175)
chr3 (225-347)||(38311071-38311194)
chr3 (225-347)||(14763029-14763152)
chr3 (225-347)||(9533990-9534113)
chr3 (235-347)||(23370776-23370888)
chr3 (225-347)||(51301255-51301377)
chr3 (42-296)||(22144626-22144871)
chr3 (45-137)||(12489200-12489293)
chr3 (229-296)||(47984468-47984535)
chr3 (229-296)||(47993755-47993822)
chr3 (229-296)||(48003042-48003109)
chr3 (229-296)||(48012328-48012395)
chr3 (174-283)||(33369267-33369376)
chr3 (174-296)||(6228989-6229110)
chr3 (174-296)||(55441203-55441324)
chr3 (219-296)||(11638175-11638252)
chr3 (224-297)||(12489089-12489162)
chr3 (219-290)||(4162572-4162643)
chr3 (174-296)||(14080281-14080402)
chr3 (286-347)||(13302510-13302571)
chr3 (286-347)||(13324058-13324119)
chr3 (212-296)||(4146012-4146096)
chr3 (174-296)||(1990565-1990686)
chr3 (286-348)||(18928966-18929028)
chr3 (286-347)||(13313166-13313227)
chr3 (286-347)||(17240783-17240844)
chr3 (243-296)||(17912859-17912912)
chr3 (219-296)||(31412697-31412774)
chr3 (228-297)||(38376037-38376106)
chr3 (211-282)||(14286563-14286634)
chr3 (229-296)||(17204528-17204594)
chr3 (229-296)||(43427878-43427945)
chr3 (174-296)||(34559662-34559783)
chr3 (103-136)||(3577779-3577812)
chr3 (174-270)||(14059593-14059687)
chr3 (247-296)||(15875915-15875964)
chr3 (207-296)||(50312983-50313071)
chr3 (212-296)||(17191354-17191438)
[»] chr6 (31 HSPs)
chr6 (13-391)||(2286994-2287367)
chr6 (21-296)||(14626496-14626771)
chr6 (60-296)||(1650471-1650707)
chr6 (13-157)||(35009895-35010039)
chr6 (225-347)||(10986451-10986574)
chr6 (225-347)||(4477519-4477642)
chr6 (225-347)||(23838860-23838983)
chr6 (244-347)||(25598323-25598426)
chr6 (286-395)||(19471556-19471668)
chr6 (219-296)||(35009818-35009895)
chr6 (174-296)||(14152068-14152189)
chr6 (286-395)||(25396896-25397008)
chr6 (230-296)||(1658125-1658191)
chr6 (177-296)||(16888146-16888264)
chr6 (174-256)||(31628057-31628138)
chr6 (174-296)||(33324465-33324586)
chr6 (219-296)||(22462459-22462536)
chr6 (207-296)||(32351854-32351943)
chr6 (228-296)||(29160667-29160735)
chr6 (211-293)||(27740639-27740720)
chr6 (174-256)||(35136405-35136486)
chr6 (286-347)||(9187218-9187279)
chr6 (207-296)||(19853961-19854050)
chr6 (283-367)||(31252143-31252230)
chr6 (207-291)||(29605245-29605329)
chr6 (286-347)||(24513115-24513176)
chr6 (219-296)||(34966673-34966750)
chr6 (207-291)||(19672099-19672183)
chr6 (219-291)||(22847858-22847930)
chr6 (304-363)||(11288922-11288984)
chr6 (212-296)||(18629975-18630059)
[»] scaffold0012 (1 HSPs)
scaffold0012 (13-395)||(222428-222816)
[»] chr5 (34 HSPs)
chr5 (13-347)||(23111471-23111793)
chr5 (21-296)||(29190641-29190904)
chr5 (13-296)||(34938889-34939163)
chr5 (223-347)||(28370324-28370449)
chr5 (214-372)||(22337170-22337332)
chr5 (214-372)||(22340708-22340870)
chr5 (225-347)||(22750802-22750925)
chr5 (225-372)||(42961227-42961378)
chr5 (225-347)||(38144806-38144929)
chr5 (225-347)||(19512048-19512171)
chr5 (45-121)||(5451322-5451398)
chr5 (174-296)||(6456386-6456507)
chr5 (228-297)||(23493734-23493803)
chr5 (228-300)||(23414941-23415013)
chr5 (174-296)||(24083839-24083961)
chr5 (228-297)||(11763870-11763939)
chr5 (224-296)||(5451207-5451279)
chr5 (45-109)||(23493623-23493687)
chr5 (229-296)||(3673678-3673745)
chr5 (174-296)||(22882186-22882308)
chr5 (229-296)||(26560168-26560235)
chr5 (228-290)||(19873658-19873720)
chr5 (243-296)||(23234849-23234902)
chr5 (178-296)||(32966501-32966617)
chr5 (207-270)||(37983162-37983225)
chr5 (64-114)||(3673573-3673623)
chr5 (207-296)||(11965790-11965879)
chr5 (174-290)||(7728193-7728308)
chr5 (174-296)||(16595281-16595401)
chr5 (293-347)||(18408215-18408269)
chr5 (229-270)||(21616843-21616884)
chr5 (174-283)||(29917723-29917835)
chr5 (228-296)||(16835663-16835731)
chr5 (212-296)||(19862021-19862105)
[»] scaffold0124 (2 HSPs)
scaffold0124 (13-395)||(35662-36038)
scaffold0124 (288-367)||(34525-34607)
[»] chr8 (30 HSPs)
chr8 (21-296)||(6774624-6774899)
chr8 (13-296)||(24548596-24548867)
chr8 (214-347)||(8728004-8728138)
chr8 (225-347)||(44477285-44477408)
chr8 (225-347)||(44492443-44492566)
chr8 (286-395)||(21840125-21840236)
chr8 (286-395)||(21931421-21931532)
chr8 (174-296)||(24267734-24267855)
chr8 (174-296)||(38636009-38636130)
chr8 (174-296)||(37653979-37654101)
chr8 (235-296)||(19331708-19331769)
chr8 (174-291)||(22742523-22742639)
chr8 (286-389)||(19750274-19750380)
chr8 (212-296)||(33611416-33611500)
chr8 (254-296)||(17345413-17345455)
chr8 (219-296)||(18041896-18041973)
chr8 (286-347)||(29643657-29643718)
chr8 (174-296)||(17285040-17285161)
chr8 (286-347)||(14056834-14056895)
chr8 (247-296)||(18261835-18261884)
chr8 (211-296)||(31194678-31194763)
chr8 (228-296)||(22497573-22497641)
chr8 (225-296)||(25295993-25296064)
chr8 (225-296)||(25758013-25758084)
chr8 (174-296)||(23836971-23837092)
chr8 (286-367)||(25111700-25111784)
chr8 (207-291)||(24552940-24553025)
chr8 (229-294)||(38533476-38533541)
chr8 (207-296)||(45465481-45465570)
chr8 (219-291)||(20709496-20709568)
[»] chr7 (39 HSPs)
chr7 (13-296)||(16479329-16479612)
chr7 (214-347)||(15167825-15167959)
chr7 (225-347)||(18873021-18873144)
chr7 (225-347)||(10896062-10896185)
chr7 (225-372)||(148279-148430)
chr7 (60-296)||(47481409-47481636)
chr7 (225-347)||(14422646-14422769)
chr7 (214-347)||(16009228-16009362)
chr7 (240-372)||(14566879-14567014)
chr7 (286-395)||(46625683-46625795)
chr7 (166-296)||(13320770-13320899)
chr7 (45-109)||(13377233-13377297)
chr7 (207-296)||(9321399-9321488)
chr7 (219-296)||(14935169-14935246)
chr7 (219-296)||(15358604-15358681)
chr7 (219-296)||(15362762-15362839)
chr7 (228-300)||(13618541-13618613)
chr7 (45-108)||(4484420-4484483)
chr7 (286-347)||(13664654-13664715)
chr7 (286-347)||(13679217-13679278)
chr7 (174-291)||(31500932-31501048)
chr7 (230-296)||(13389552-13389618)
chr7 (174-291)||(4438583-4438699)
chr7 (174-291)||(14940515-14940631)
chr7 (174-291)||(15368108-15368224)
chr7 (212-296)||(4446011-4446095)
chr7 (225-297)||(9724170-9724242)
chr7 (228-296)||(13377344-13377412)
chr7 (21-85)||(26009906-26009970)
chr7 (219-291)||(38424025-38424097)
chr7 (225-297)||(45149415-45149487)
chr7 (174-297)||(17224290-17224413)
chr7 (230-296)||(13274614-13274680)
chr7 (228-270)||(33559480-33559522)
chr7 (207-296)||(13449181-13449270)
chr7 (229-297)||(28390137-28390205)
chr7 (246-296)||(4484560-4484610)
chr7 (174-296)||(34241543-34241664)
chr7 (284-367)||(14230502-14230588)
[»] chr4 (28 HSPs)
chr4 (13-395)||(14911539-14911914)
chr4 (225-347)||(18213427-18213550)
chr4 (42-296)||(23270288-23270526)
chr4 (64-293)||(40885916-40886125)
chr4 (45-147)||(15044508-15044611)
chr4 (45-147)||(15109813-15109916)
chr4 (174-296)||(38764481-38764602)
chr4 (174-296)||(47535399-47535521)
chr4 (286-386)||(8834618-8834721)
chr4 (286-370)||(15307843-15307930)
chr4 (174-296)||(15013646-15013768)
chr4 (215-296)||(18240390-18240471)
chr4 (228-296)||(15044643-15044711)
chr4 (228-296)||(15109713-15109781)
chr4 (287-342)||(13888366-13888421)
chr4 (207-296)||(47468693-47468782)
chr4 (225-297)||(13590437-13590509)
chr4 (212-296)||(41256733-41256817)
chr4 (219-291)||(41917088-41917160)
chr4 (219-291)||(50220314-50220386)
chr4 (287-342)||(13887509-13887564)
chr4 (207-296)||(7849795-7849884)
chr4 (244-296)||(820264-820316)
chr4 (284-367)||(27905986-27906072)
chr4 (174-296)||(41166290-41166411)
chr4 (286-347)||(15244938-15244999)
chr4 (64-109)||(18240528-18240573)
chr4 (286-342)||(11847829-11847885)
[»] chr1 (23 HSPs)
chr1 (17-296)||(41393827-41394106)
chr1 (21-296)||(45051064-45051327)
chr1 (173-347)||(32651182-32651356)
chr1 (214-372)||(16372601-16372763)
chr1 (225-347)||(20437294-20437417)
chr1 (174-296)||(8538273-8538395)
chr1 (174-296)||(8603512-8603634)
chr1 (174-296)||(22143724-22143845)
chr1 (228-297)||(25093681-25093750)
chr1 (286-395)||(11157815-11157926)
chr1 (174-296)||(21194775-21194897)
chr1 (219-280)||(5768554-5768615)
chr1 (286-347)||(18712522-18712583)
chr1 (228-300)||(20193860-20193932)
chr1 (212-296)||(49997654-49997738)
chr1 (174-296)||(19602870-19602990)
chr1 (228-291)||(20177001-20177064)
chr1 (177-291)||(22829783-22829895)
chr1 (228-288)||(33397167-33397227)
chr1 (219-291)||(40436638-40436710)
chr1 (212-291)||(37234218-37234297)
chr1 (212-296)||(41229292-41229377)
chr1 (212-296)||(13377192-13377276)
[»] scaffold0215 (1 HSPs)
scaffold0215 (60-296)||(16613-16849)
[»] scaffold0125 (1 HSPs)
scaffold0125 (13-296)||(35121-35395)
[»] scaffold0037 (1 HSPs)
scaffold0037 (173-372)||(71588-71790)
[»] chr2 (20 HSPs)
chr2 (170-296)||(7508223-7508349)
chr2 (225-372)||(6260418-6260569)
chr2 (225-347)||(19661723-19661846)
chr2 (225-372)||(9242621-9242771)
chr2 (225-347)||(6483380-6483503)
chr2 (225-347)||(6486847-6486970)
chr2 (166-296)||(25265768-25265899)
chr2 (286-395)||(24661299-24661411)
chr2 (177-296)||(19669466-19669583)
chr2 (174-296)||(19666289-19666410)
chr2 (207-296)||(24277559-24277648)
chr2 (219-291)||(9636551-9636623)
chr2 (243-296)||(3594-3647)
chr2 (207-296)||(16293128-16293217)
chr2 (286-347)||(23063408-23063469)
chr2 (228-291)||(18536573-18536636)
chr2 (166-256)||(36982860-36982949)
chr2 (211-296)||(24294876-24294961)
chr2 (207-296)||(24341768-24341857)
chr2 (228-300)||(24561093-24561165)
[»] scaffold0019 (1 HSPs)
scaffold0019 (225-372)||(34099-34250)
[»] scaffold0337 (1 HSPs)
scaffold0337 (226-372)||(9016-9166)
[»] scaffold0162 (1 HSPs)
scaffold0162 (127-296)||(8555-8727)
[»] scaffold0127 (1 HSPs)
scaffold0127 (225-347)||(9901-10025)
[»] scaffold0026 (4 HSPs)
scaffold0026 (225-347)||(111348-111471)
scaffold0026 (228-291)||(90213-90276)
scaffold0026 (286-347)||(12122-12183)
scaffold0026 (81-113)||(90331-90363)
[»] scaffold0075 (2 HSPs)
scaffold0075 (121-238)||(34836-34953)
scaffold0075 (13-55)||(34937-34979)
[»] scaffold0553 (1 HSPs)
scaffold0553 (235-347)||(10466-10578)
[»] scaffold0544 (1 HSPs)
scaffold0544 (235-347)||(1796-1908)
[»] scaffold0004 (3 HSPs)
scaffold0004 (286-395)||(128878-128990)
scaffold0004 (207-296)||(27291-27380)
scaffold0004 (207-296)||(86151-86240)
[»] scaffold0232 (1 HSPs)
scaffold0232 (286-395)||(18651-18763)
[»] scaffold0195 (4 HSPs)
scaffold0195 (124-296)||(18915-19090)
scaffold0195 (124-296)||(20999-21174)
scaffold0195 (42-109)||(18856-18923)
scaffold0195 (42-109)||(20940-21007)
[»] scaffold0243 (2 HSPs)
scaffold0243 (45-148)||(2779-2883)
scaffold0243 (244-296)||(2680-2732)
[»] scaffold0970 (2 HSPs)
scaffold0970 (46-121)||(2148-2223)
scaffold0970 (228-296)||(2270-2338)
[»] scaffold0600 (1 HSPs)
scaffold0600 (286-395)||(457-568)
[»] scaffold0028 (2 HSPs)
scaffold0028 (174-296)||(79311-79432)
scaffold0028 (286-395)||(1791-1903)
[»] scaffold0094 (1 HSPs)
scaffold0094 (286-395)||(51969-52081)
[»] scaffold0053 (1 HSPs)
scaffold0053 (286-395)||(81434-81546)
[»] scaffold0031 (3 HSPs)
scaffold0031 (286-395)||(121625-121736)
scaffold0031 (286-395)||(132502-132613)
scaffold0031 (174-296)||(70401-70522)
[»] scaffold0253 (2 HSPs)
scaffold0253 (212-296)||(7201-7285)
scaffold0253 (212-296)||(16626-16710)
[»] scaffold0193 (1 HSPs)
scaffold0193 (212-296)||(4405-4489)
[»] scaffold0169 (1 HSPs)
scaffold0169 (286-395)||(6695-6809)
[»] scaffold0601 (1 HSPs)
scaffold0601 (229-300)||(1233-1304)
[»] scaffold0138 (3 HSPs)
scaffold0138 (286-349)||(1540-1603)
scaffold0138 (347-395)||(12082-12130)
scaffold0138 (177-256)||(22810-22888)
[»] scaffold0335 (1 HSPs)
scaffold0335 (286-395)||(2848-2959)
[»] scaffold0153 (1 HSPs)
scaffold0153 (207-296)||(1629-1718)
[»] scaffold0327 (1 HSPs)
scaffold0327 (174-256)||(5729-5810)
[»] scaffold0123 (1 HSPs)
scaffold0123 (174-296)||(7782-7903)
[»] scaffold0058 (1 HSPs)
scaffold0058 (174-256)||(70700-70781)
[»] scaffold0461 (1 HSPs)
scaffold0461 (286-347)||(279-340)
[»] scaffold0317 (1 HSPs)
scaffold0317 (286-347)||(1110-1171)
[»] scaffold0139 (1 HSPs)
scaffold0139 (286-347)||(15269-15330)
[»] scaffold0077 (1 HSPs)
scaffold0077 (219-296)||(6350-6427)
[»] scaffold0049 (1 HSPs)
scaffold0049 (228-297)||(33776-33845)
[»] scaffold0020 (2 HSPs)
scaffold0020 (286-347)||(102199-102260)
scaffold0020 (228-296)||(107826-107894)
[»] scaffold0387 (1 HSPs)
scaffold0387 (229-296)||(1313-1380)
[»] scaffold0022 (2 HSPs)
scaffold0022 (243-297)||(68320-68374)
scaffold0022 (174-290)||(103281-103396)
[»] scaffold0235 (2 HSPs)
scaffold0235 (286-347)||(22864-22925)
scaffold0235 (286-347)||(15206-15267)
[»] scaffold0222 (1 HSPs)
scaffold0222 (286-347)||(16543-16604)
[»] scaffold0165 (2 HSPs)
scaffold0165 (207-296)||(21802-21891)
scaffold0165 (228-296)||(29788-29856)
[»] scaffold0013 (1 HSPs)
scaffold0013 (207-296)||(35284-35373)
[»] scaffold0700 (1 HSPs)
scaffold0700 (177-296)||(2289-2409)
[»] scaffold0670 (1 HSPs)
scaffold0670 (219-291)||(8044-8116)
[»] scaffold0151 (1 HSPs)
scaffold0151 (213-296)||(22785-22868)
[»] scaffold0025 (3 HSPs)
scaffold0025 (286-347)||(14667-14729)
scaffold0025 (219-296)||(85339-85416)
scaffold0025 (244-296)||(53189-53241)
[»] scaffold0634 (1 HSPs)
scaffold0634 (286-347)||(3385-3446)
[»] scaffold0080 (1 HSPs)
scaffold0080 (212-297)||(24035-24119)
[»] scaffold0032 (1 HSPs)
scaffold0032 (211-296)||(104976-105061)
[»] scaffold1272 (1 HSPs)
scaffold1272 (212-296)||(119-203)
[»] scaffold0453 (1 HSPs)
scaffold0453 (284-367)||(10798-10884)
[»] scaffold0389 (1 HSPs)
scaffold0389 (177-296)||(10438-10555)
[»] scaffold0034 (1 HSPs)
scaffold0034 (284-367)||(73005-73091)
[»] scaffold0009 (1 HSPs)
scaffold0009 (244-296)||(69307-69359)
[»] scaffold0483 (2 HSPs)
scaffold0483 (229-296)||(6488-6555)
scaffold0483 (286-347)||(11280-11341)
[»] scaffold0190 (1 HSPs)
scaffold0190 (174-296)||(9711-9830)
[»] scaffold0132 (1 HSPs)
scaffold0132 (265-296)||(13360-13391)
[»] scaffold0029 (1 HSPs)
scaffold0029 (300-347)||(111638-111685)
[»] scaffold0346 (1 HSPs)
scaffold0346 (212-290)||(16321-16399)
[»] scaffold0148 (1 HSPs)
scaffold0148 (207-296)||(37361-37450)
[»] scaffold0561 (1 HSPs)
scaffold0561 (229-289)||(3146-3206)


Alignment Details
Target: chr3 (Bit Score: 313; Significance: 1e-176; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 20 - 395
Target Start/End: Original strand, 16800482 - 16800860
Alignment:
Q  20 caaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgct 119  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16800482 caaaagtgctggaaaaagaactgctcgcttaagcgtccaccttcacgcttaagcgtccaaaatccagtagctactgtgactgcacgcttaccagctcgct 16800581  T
Q  120 tacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggtt 219  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  16800582 tacagcacgcttaagcgtgcagtcatcagacaggaactagcgtcgcttgcagcgtcgcttaagcgaccattcaaaattctgcagaacaaaagttacggtt 16800681  T
Q  220 ttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaa 319  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  16800682 ttcacccatttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccgaagaatgtttataggttcaatatacaattaggcatctaa 16800781  T
Q  320 aggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctcaaattctctccaac 395  Q
    |||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16800782 aggaacataaaacatgcatcaacaacaacaattcagctcattccaacaatcttgcataatctctcaaattctctccaac 16800860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 13 - 296
Target Start/End: Original strand, 15614436 - 15614719
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15614436 aaaatttcaaaagtgctggaaaaagaactgcacgcttaagcgtccacctgcacgcttaagcgtccaagttccagtagctactgtgactgcacgcttacca 15614535  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15614536 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcagaacaaaagt 15614635  T
Q  213 tacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||| | |||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  15614636 tacaggtttcacccatttttcacccaaaactcccaattttgatctcccaatacccaaacatgtttccaaagaatgtttataggt 15614719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 15575417 - 15575621
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15575417 aaaatttcaaaagtgctggaaaaagaactgcacgcttaagcgtccacctgcacgcttaagcgtccaagttccagtagctactgtgactgcacgcttacca 15575516  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagt 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||    
T  15575517 gctcgcttacagcacgcttaagcgtgcattcatcagacatcaactagcgtcgcttgcagcatcgcttaagtgaccattcaaaattctgcagaacaaaagt 15575616  T
Q  213 tacgg 217  Q
    |||||    
T  15575617 tacgg 15575621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 20248175 - 20248052
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20248175 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 20248076  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  20248075 acataaaacatgcatcaacaacaa 20248052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 38311194 - 38311071
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38311194 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 38311095  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  38311094 acataaaacatgcatcaacaacaa 38311071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 14763152 - 14763029
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14763152 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 14763053  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  14763052 acataaaacatgcatcaacaacaa 14763029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 9533990 - 9534113
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  9533990 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaagga 9534089  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  9534090 acataaaacatgcatcaacaacaa 9534113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 235 - 347
Target Start/End: Complemental strand, 23370888 - 23370776
Alignment:
Q  235 cccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacat 334  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||     
T  23370888 cccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaataagacatctaaaggaacataaaacac 23370789  T
Q  335 gcatcaacaacaa 347  Q
    |||||||||||||    
T  23370788 gcatcaacaacaa 23370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 51301255 - 51301377
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||  |    
T  51301255 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaa-catgtttccaaagattgtttataggttcattatgcaattaggcatctaaataa 51301353  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  51301354 acataaaacatgcatcaacaacaa 51301377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 296
Target Start/End: Complemental strand, 22144871 - 22144626
Alignment:
Q  42 gctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgcttacagcacgcttaagcgtgcat 141  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||| |||| ||||||||||||     
T  22144871 gctcgcttaagcgtccatctgcacgcttaagcgtgcaaattccagtagctactgtaactgcacaattaccagctcgcttacggcacacttaagcgtgcag 22144772  T
Q  142 tcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataa 241  Q
    ||||| |||  || ||        |||||| ||||||||||||||||||||||||||| ||  | ||| ||||||| ||| | ||  |||||||||| ||    
T  22144771 tcatctgacgacagct--------ttgcagcgtcgcttaagcgaccattcaaaattctacagca-aaatgttacgggtttgaaccccttttcacccaaaa 22144681  T
Q  242 ctcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
      ||||||||||||| | |  ||||||||  ||||||||||   |||||||||||    
T  22144680 tccccaattttgatccctctttgcccaaatgtgtttccaaaacatgtttataggt 22144626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 12489293 - 12489200
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctta-cagcacgcttaagcgt 137  Q
    |||||||||||||||||||| |||||||||| ||| |||||| ||||||| ||  ||||| |||||||||||||||| ||||||||||||||||    
T  12489293 cgcttaagcgtccacctgcaagcttaagcgtgcaagttccagaagctactatggttgcacacttaccagctcgcttaccagcacgcttaagcgt 12489200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 47984468 - 47984535
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  47984468 ttttcacccaaaattcccaattttgatctcccaatacccaaacatgtttccaaagattgtttataggt 47984535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 47993755 - 47993822
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  47993755 ttttcacccaaaattcccaattttgatctcccaatacccaaacatgtttccaaagattgtttataggt 47993822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 48003042 - 48003109
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  48003042 ttttcacccaaaattcccaattttgatctcccaatacccaaacatgtttccaaagattgtttataggt 48003109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 48012328 - 48012395
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  48012328 ttttcacccaaaattcccaattttgatctcccaatacccaaacatgtttccaaagattgtttataggt 48012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 283
Target Start/End: Complemental strand, 33369376 - 33369267
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||  | ||| ||||||||| || |||  |||||| ||||| || ||||||||||| || |||||||||||||||| ||||||||||| ||    
T  33369376 tcgcttaagcgaatagtcataattctgcagaaaaaatattacgggtttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatat 33369277  T
Q  274 gtttccaaag 283  Q
    ||||||||||    
T  33369276 gtttccaaag 33369267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 6229110 - 6228989
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || |||| |||||| ||| | || |||||||| || || | |||||||||||||| ||||||||||| ||    
T  6229110 tcgcttaagcgaacagtcatagttctgcagaaaaaaa-ttacgggtttgaaccctttttcacacaaaatttccaattttgatctcccaatgcccaaatat 6229012  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||||||||    
T  6229011 gtttccaaagtttgtttataggt 6228989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 55441324 - 55441203
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||||||||| || |||||| || ||| ||||||| || ||||| ||||||||||| ||| || |||||||||| |   |||||||||| |    
T  55441324 tcgcttaagcgaccattcataaatctgcagaa-aaatgttacgggttccacccctttttcacccaaaaccccaaattttgatcccttgatgcccaaacgt 55441226  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| | | |||||||||||    
T  55441225 gtttccagaaaatgtttataggt 55441203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 11638175 - 11638252
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || |||||||||||||| |||||||||||||||| ||| |  |||| |||||||||||| ||||||||||||    
T  11638175 tttcaaccctttttcacccataaatcccaattttgatctcccaaggttcaaatatgtttccaaagtttgtttataggt 11638252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 12489162 - 12489089
Alignment:
Q  224 cccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    ||||||||||||||| ||  ||||||||||||||| |||||||| || |||||||||||| ||||||| |||||    
T  12489162 cccatttttcacccaaaatccccaattttgatctcccaatgcccgaatatgtttccaaagtttgtttacaggtt 12489089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 4162643 - 4162572
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttt 290  Q
    ||||| || ||||||||||| || |||||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  4162643 tttcaaccctttttcacccaaaattcccaattttgagctcccaatgcccaaatatgtttccaaagtttgttt 4162572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 14080281 - 14080402
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||||||||| ||||||||| || ||| ||||||| ||||| |  ||||||||||| | | ||||||||||||| |   |||||||||  |    
T  14080281 tcgcttaagcgaccattcataattctgcagaa-aaatgttacgggtttcaacactttttcacccaaatcccccaattttgatcccctgatgcccaaatgt 14080379  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||| | | |||||||||||||    
T  14080380 gtttctagaaattgtttataggt 14080402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 13302571 - 13302510
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||| | |||||||| |||||||||||||||||| |||||| |||||||||||||    
T  13302571 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 13302510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 13324119 - 13324058
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    ||||||||||| | ||||||||  ||||||||||||||||| |||||| |||||||||||||    
T  13324119 tgtttataggtgctatatacaaccaggcatctaaaggaacacaaaacaggcatcaacaacaa 13324058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 4146096 - 4146012
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| ||||||| |||||| || || ||||||||||||| ||||||| ||| ||||||| |||| ||||||| ||||    
T  4146096 ttacgggtttcaaccattttccacccaaaattctcaattttgatctcccaatgcctaaatatgtttctaaagtttgtttacaggt 4146012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 1990565 - 1990686
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||| | || || | |||||| ||||| || ||||||| ||| || ||||||||||||| ||  |||||||||| ||    
T  1990565 tcgcttaagcgaacagtcataattctgtagaaaaata-ttacgggtttcaaccctttttcatccaaaattcccaattttgatttcctaatgcccaaatat 1990663  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  1990664 gtttccagagtttgtttacaggt 1990686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 18928966 - 18929028
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaat 348  Q
    |||||| |||| ||||| |||| |||||||||||||||||| |||||| |||| |||||||||    
T  18928966 tgtttacaggtccaatacacaactaggcatctaaaggaacacaaaacaggcattaacaacaat 18929028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 13313227 - 13313166
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||| | |||||||| || ||||||||||||||| |||||| |||||||||||||    
T  13313227 tgtttacaggtcctatatacaactatgcatctaaaggaacacaaaacaggcatcaacaacaa 13313166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 17240844 - 17240783
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| ||||||||||||||||   |||||| |||||||||||||    
T  17240844 tgtttacaggttcaatacacaactaggcatctaaaggaattcaaaacaggcatcaacaacaa 17240783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 17912912 - 17912859
Alignment:
Q  243 tcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||| |||||||||||  |||||||| | |||||||||||||    
T  17912912 tcccaattttgatctcccaatgcccaaatgtgtttccacatattgtttataggt 17912859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 31412774 - 31412697
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| ||||||| |||||| || || ||||||||||||| ||| ||||||| ||||||| |||| ||||||| ||||    
T  31412774 tttcaaccattttccacccaaaattctcaattttgatctcccaacgcccaaatatgtttcaaaagtttgtttacaggt 31412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 38376106 - 38376037
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    ||||||||||| || || ||||||||||||| ||| ||| ||| ||||||||||| |||||||| |||||    
T  38376106 tttttcacccaaaattctcaattttgatctcccaacgccaaaatatgtttccaaatattgtttacaggtt 38376037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 14286563 - 14286634
Alignment:
Q  211 gttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaa 282  Q
    ||||||| ||||| ||  |||||||||| ||  ||||||||||||| | ||||||||||| |||||||||||    
T  14286563 gttacgggtttcaaccccttttcacccaaaatccccaattttgatccctcaatgcccaaatatgtttccaaa 14286634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 17204528 - 17204594
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| ||| ||||||||||||||  |||||||||||| |||||||| || ||||||| ||||    
T  17204528 ttttcacccaaaac-cccaattttgatctgccaatgcccaaacgtgtttccagagtttgtttacaggt 17204594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 43427945 - 43427878
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| || || ||||||||||||| ||| ||||||  |||||||||||| ||||||| ||||    
T  43427945 ttttcacccaaaattctcaattttgatctcccaacgcccaattatgtttccaaagtttgtttacaggt 43427878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 34559662 - 34559783
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || || | |||||| ||||| ||  |||||||||| ||  |||||||||||||||  ||||||||||  |    
T  34559662 tcgcttaagcgaacagtcatagttctgcagaaaaata-ttacgggtttcaacctcttttcacccaaaatccccaattttgatctccaaatgcccaaatgt 34559760  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  34559761 gtttccagagtttgtttacaggt 34559783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 3577779 - 3577812
Alignment:
Q  103 acgcttaccagctcgcttacagcacgcttaagcg 136  Q
    |||||||||||||||||||||| |||||||||||    
T  3577779 acgcttaccagctcgcttacaggacgcttaagcg 3577812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 14059687 - 14059593
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaa 270  Q
    |||||||||||| | |||| | ||||||| ||  || ||||||| ||||| ||  |||||||||| ||| ||||||||||||| | |||||||||||    
T  14059687 tcgcttaagcgaacgttcatagttctgcagaa--aatgttacgggtttcaaccccttttcacccaaaacacccaattttgatccctcaatgcccaaa 14059593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 15875915 - 15875964
Alignment:
Q  247 aattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||| |||||||||||  |||||||| |||||||||| ||||    
T  15875915 aattttgatctcccaatgcccaaatgtgtttccagagattgtttacaggt 15875964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 50312983 - 50313071
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || |||||| ||||||||| |||||  |||  |||||||||||| ||||||| ||||    
T  50312983 aaaaattacgggtttcaaccctttttcacccaaaaatcccaa-tttgatctcccaatgttcaattatgtttccaaagtttgtttacaggt 50313071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 17191354 - 17191438
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| ||  |||||||||| ||  | ||||||||||||| |||||||||||| |||| ||| || ||||||| ||||    
T  17191354 ttacgggtttcaaccccttttcacccaaaatcctcaattttgatctctcaatgcccaaacgtgttaccagagtttgtttacaggt 17191438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 287; Significance: 1e-161; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 13 - 391
Target Start/End: Complemental strand, 2287367 - 2286994
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2287367 aaaattccaaaagtgctggaaaaagaactactcgcttaagcgtctacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 2287268  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagt 212  Q
    |||||||||||||        || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  2287267 gctcgcttacagc--------gcatgcattcatcagacagcaactagcgtcgcttgcagcgtcgcttaagcgaccattcaaaattctgcagaacaaaagt 2287176  T
Q  213 tacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2287175 tacggttttcacccatttttcacccaaaactcccaattttgatctccaaatgcccaaacatgtttccaaagaatgtttataggttcaatatacaattagg 2287076  T
Q  313 catctaaaggaacataaaacatgcatcaaca---acaattcaactcattccaacaatcttgcataacctctcaaattctctc 391  Q
    |||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  2287075 catctaaaggaacataaaacatgcatcaacaacaacaattcagctcattccaacaatcttgcataatctctcaaattctctc 2286994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 296
Target Start/End: Complemental strand, 14626771 - 14626496
Alignment:
Q  21 aaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctt 120  Q
    |||||||||||||||||  | || |||||||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||||| |||||||    
T  14626771 aaaagtgctggaaaaagttctgcacgcttaagcgtccaccagcacgcttaagtttccaacttccagtagctactgtgactgcacgcttaccatctcgctt 14626672  T
Q  121 acagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttt 220  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  14626671 acagcacgcttaaacgtgcattcatcagacagcaactagcgtcgcttgcatcgtcgcttaagcgaccatgcaaaattctgcataacaaaagttacgggtt 14626572  T
Q  221 tcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14626571 tcaaccatttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagaatgtttataggt 14626496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 60 - 296
Target Start/End: Complemental strand, 1650707 - 1650471
Alignment:
Q  60 ctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgcttacagcacgcttaagcgtgcattcatcagacagcaactag 159  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1650707 ctgcacgcttaagcgtccaagttccagtagctactgtgactgcacacttaccagctcgcttacagcacgcttaagcgtgcattcatcagacagcaactag 1650608  T
Q  160 cgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctca 259  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||     
T  1650607 cgtcgcttgcagcgtcgcttaagcgaccattcaaaattatgcagaacaaaagttacgggtttcacccatttttcacccaaaactcccaattttgatctcc 1650508  T
Q  260 caatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||||||||||||||||| |||||||||||    
T  1650507 caatacccaaacatgtttccaaagaatgtttataggt 1650471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 35010039 - 35009895
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  35010039 aaaatttcaaaagtgctggaaaaagaactgctcgcttaagcgtccaccttcacgcttaagcgtccaaaatccagtagctactgtaactgcacgcttacca 35009940  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaact 157  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  35009939 gctcgcttacagcacgcttaagcgtgcagtcatcagacagcaact 35009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 10986574 - 10986451
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10986574 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 10986475  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    |||||||||||||||||| |||||    
T  10986474 acataaaacatgcatcaagaacaa 10986451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 4477519 - 4477642
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  4477519 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattagacatctaaagga 4477618  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    |||||||||| |||||||||||||    
T  4477619 acataaaacacgcatcaacaacaa 4477642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 23838860 - 23838983
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  23838860 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggtatctaaagga 23838959  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||| ||||    
T  23838960 acataaaacatgcatcaacgacaa 23838983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 244 - 347
Target Start/End: Original strand, 25598323 - 25598426
Alignment:
Q  244 cccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaaca 343  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  25598323 cccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagacatctaaataaacataaaacatgcatcaaca 25598422  T
Q  344 acaa 347  Q
    ||||    
T  25598423 acaa 25598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 19471668 - 19471556
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa---ttcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| || |||||||||||| |||||||||| ||||||||||||||| ||||||||||||   |||| ||||||||||||||||||||||| ||||||    
T  19471668 tgtttacagattcaatatacaactaggcatctataggaacataaaacatacatcaacaacaacaattcagctcattccaacaatcttgcataatctctca 19471569  T
Q  383 aattctctccaac 395  Q
    |||||||||||||    
T  19471568 aattctctccaac 19471556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 35009895 - 35009818
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35009895 tttcacccatttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggt 35009818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 14152068 - 14152189
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || || | |||||| ||||| ||  |||||||||| ||| ||||||||||||||| |||||| |||||||    
T  14152068 tcgcttaagcgaacagtcataattctgcagaaaaata-ttacggatttcaaccccttttcacccaaaacccccaattttgatctcccaatgctcaaacat 14152166  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||||||||||||||||    
T  14152167 gtttccaaagattgtttataggt 14152189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 25396896 - 25397008
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||| || |||| ||||||||||||||||||||||||| ||||   ||||||||||||| ||||||| |||||| ||||| |  ||||||    
T  25396896 tgtttacaggttcagtacacaactaggcatctaaaggaacataaaacaggcatcaacaacaacaattcagctcattctaacaatgttgcaaattctctca 25396995  T
Q  383 aattctctccaac 395  Q
    |||||||||||||    
T  25396996 aattctctccaac 25397008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 1658191 - 1658125
Alignment:
Q  230 tttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||| | || |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  1658191 tttcacctaaaattcccaatttttatctcccaatgcccaaacatgtttccaaagattgtttataggt 1658125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 16888264 - 16888146
Alignment:
Q  177 cttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtt 276  Q
    |||||||||||||||| |||| |||| || ||| ||||||| ||||| || ||||||||||| ||| ||||||||||||| |  | | ||||||  ||||    
T  16888264 cttaagcgaccattcataattttgcaaaa-aaatgttacgggtttcaaccctttttcacccaaaacacccaattttgatcccctagtacccaaatgtgtt 16888166  T
Q  277 tccaaagattgtttataggt 296  Q
    |||| |||||||||||||||    
T  16888165 tccagagattgtttataggt 16888146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 31628057 - 31628138
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatc 256  Q
    ||||||||||||||||||| || |||||| || ||| ||||||| || ||||| ||||||||||| |||||||||||||||||    
T  31628057 tcgcttaagcgaccattcataaatctgcagaa-aaatgttacgggttccacccctttttcacccaaaactcccaattttgatc 31628138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 33324465 - 33324586
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| |||||| ||||||||| || ||| ||||||| |||||||| ||||||||||  ||| ||||||||||||| |   ||| |||||  |    
T  33324465 tcgcttaagcgatcattcataattctgcagaa-aaatgttacgggtttcacccctttttcaccccaaacccccaattttgatcccctgatggccaaatgt 33324563  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| | |||||||||||||    
T  33324564 gtttccagaaattgtttataggt 33324586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 22462536 - 22462459
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||||||| || || ||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  22462536 tttcaaccctttttcacccaaaattctcaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 22462459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 32351854 - 32351943
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| |||||||| ||||  || |||||||||||||||| ||||||||||| |||||||||||| || |||| ||||    
T  32351854 aaaacttacgggtttcaaccattttttacccgaaattcccaattttgatctcccaatgcccaaatatgtttccaaagtttatttacaggt 32351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 29160735 - 29160667
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| || |||||||||||||||| ||| ||||||| |||||||||||| ||||||| ||||    
T  29160735 tttttcacccacaattcccaattttgatctcccaacgcccaaatatgtttccaaagtttgtttacaggt 29160667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 293
Target Start/End: Original strand, 27740639 - 27740720
Alignment:
Q  211 gttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttata 293  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||| || |||||||||||  |||||||| | ||| ||||||    
T  27740639 gttacgggtttcacccctttttcacccaaaactcccaattttgat-tcccaatgcccaaatgtgtttccagaaattttttata 27740720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 35136486 - 35136405
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatc 256  Q
    ||||||||||||||||||| |||||| || || ||| ||||||| |||||||  ||||||||||| ||| |||||||||||||    
T  35136486 tcgcttaagcgaccattcataattctacagaa-aaatgttacgggtttcacctctttttcacccaaaacccccaattttgatc 35136405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 9187218 - 9187279
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||| ||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  9187218 tgtttacaggttctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 9187279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 19853961 - 19854050
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || |||||||||||||||| ||| |  |||| |||||||||||| ||||||| ||||    
T  19853961 aaaaattacgggtttcaaccctttttcacccaaaagtcccaattttgatctcccaaggttcaaatatgtttccaaagtttgtttacaggt 19854050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 367
Target Start/End: Original strand, 31252143 - 31252230
Alignment:
Q  283 gattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaaca---attcaactcattccaacaatc 367  Q
    ||||||||| |||||| ||| |||| ||| |||| |||||||||  |||||||||| |||||||   |||||||||||||||||||||    
T  31252143 gattgtttacaggttctatacacaactagtcatcgaaaggaacacgaaacatgcattaacaacatcaattcaactcattccaacaatc 31252230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 29605245 - 29605329
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    |||| |||||| ||||| |  ||||||||||| || |||||||||||||||| |||||||||||  |||||||| || |||||||    
T  29605245 aaaaattacgggtttcaacactttttcacccaaaattcccaattttgatctcccaatgcccaaatgtgtttccagagtttgttta 29605329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 24513176 - 24513115
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| ||||||| || |||| ||| |||||||||||||| |||||| |||||||||||||    
T  24513176 tgtttacaggttcattacacaactagacatctaaaggaacacaaaacaggcatcaacaacaa 24513115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 34966673 - 34966750
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||||||| || |||||||||||||||| ||| |||| || | |||||||||| ||||||| ||||    
T  34966673 tttcaaccctttttcacccaaaattcccaattttgatctcccaacgcccgaataagtttccaaagtttgtttacaggt 34966750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 19672099 - 19672183
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    |||| |||||| ||||| || ||||||||||| || ||| |||||||||||| ||| |  |||| |||||||||||| |||||||    
T  19672099 aaaaattacgggtttcaaccctttttcacccaaaaatcctaattttgatctcccaaggtacaaatatgtttccaaagtttgttta 19672183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 22847858 - 22847930
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| |||||||||||| | || || ||||||||||||  ||||||||||| ||||||| |||| |||||||    
T  22847858 tttcaaccatttttcacctaaaattctcaattttgatctgccaatgcccaaatatgtttcaaaagtttgttta 22847930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 11288984 - 11288922
Alignment:
Q  304 acaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaac 363  Q
    |||| |||||||| |||||||||||| | ||||||   ||||| |||||||||||||||||||    
T  11288984 acaactaggcatcaaaaggaacataacatatgcattaacaacatcaattcaactcattccaac 11288922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 18630059 - 18629975
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| || ||||||| ||| ||  ||||||||||||||| ||||||||||   |||||||| || ||||||| ||||    
T  18630059 ttacgggtttcaaccctttttcatccaaaatccccaattttgatctcccaatgcccaattgtgtttccagagtttgtttacaggt 18629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 395
Target Start/End: Complemental strand, 222816 - 222428
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  222816 aaaatttcaaaagtgttggaaaaagatttgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtaactccacgcttacca 222717  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaact---agcgtcgcttgcagagtcgcttaagcgaccattcaaaatt-ctgcataacaa 208  Q
    |||||||||||||||||||||||||||| |||||||||||||  |   |||||||||||||||||||||||||||||||||||||||| ||||| || ||    
T  222716 gctcgcttacagcacgcttaagcgtgcagtcatcagacagcactttgcagcgtcgcttgcagagtcgcttaagcgaccattcaaaatttctgcagaa-aa 222618  T
Q  209 aagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaat 308  Q
    | ||||| | || ||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  222617 atgttacaggttccacccctttttcacccaaaacttccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcaatatacaat 222518  T
Q  309 taggcatctaaaggaacataaaacatgcatcaaca---acaattcaactcattccaacaatcttgcataacctctcaaattctctccaac 395  Q
    |||||||||||||||||||||||||||||||||||   |||||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  222517 taggcatctaaaggaacataaaacatgcatcaacaacaacaattcagctctttccaacaatcttgcataatctctcaaattctctccaac 222428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 246; Significance: 1e-136; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 347
Target Start/End: Complemental strand, 23111793 - 23111471
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23111793 aaaattccaaaagtgctggaaaaataactgctcgcttaagcgtccatctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 23111694  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagt 212  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||            ||||||||||||||||||||||| |||||||||    
T  23111693 gctcgcttatagcccgcttaagcgtgcattcatcagacaacaactagcgtcgctt------------aagcgaccattcaaaattctgcagaacaaaagt 23111606  T
Q  213 tacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23111605 tacggttttcacccatttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttatcggttcaatatacaattagg 23111506  T
Q  313 catctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||||| ||||||||||||||||||||||||||    
T  23111505 catctaaatgaacataaaacatgcatcaacaacaa 23111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 21 - 296
Target Start/End: Complemental strand, 29190904 - 29190641
Alignment:
Q  21 aaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctt 120  Q
    ||||||| |||||||||  | || |||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  29190904 aaaagtgttggaaaaagttctgcacgcttaagcgtccaccagcacgcttaagcgtccaacttctagtagctactgtgactgcacgcttaccatctcgctt 29190805  T
Q  121 acagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||| ||    
T  29190804 acagcacgcttaagcgtgcattcatcagacagcaactagcgtc------------gcttaagcgaccattcaaaattctgcataacaaaagttacgggtt 29190717  T
Q  221 tcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  29190716 tcacccatttttcacccaaaactcccaattttgatctcccaatgcctaaacatgtttccaaagaatgtttataggt 29190641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 13 - 296
Target Start/End: Original strand, 34938889 - 34939163
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  34938889 aaaatttcaaaagtgctggaaaaagaactgctcgcttaagcgtccacctgcacacttaagcgtccaaattccagtagctactgtaactgcacgcttacca 34938988  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaa-ttctgcataacaaaag 211  Q
    |||||||||||||||||||||||||||| |||||||||| | |||        || ||| |||||| |||||||||||||||| ||||||| || ||| |    
T  34938989 gctcgcttacagcacgcttaagcgtgcagtcatcagacaac-act--------ttccagcgtcgctaaagcgaccattcaaaatttctgcagaa-aaatg 34939078  T
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| || ||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  34939079 ttacgggttccacccctttttcacccaaaactcccaattttgatctcccaatacccaaacatgttttcaaagattgtttataggt 34939163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 223 - 347
Target Start/End: Complemental strand, 28370449 - 28370324
Alignment:
Q  223 acccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaag 321  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370449 acccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaag 28370350  T
Q  322 gaacataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||||    
T  28370349 gaacataaaacatgcatcaacaacaa 28370324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 22337170 - 22337332
Alignment:
Q  214 acggttttcacccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  22337170 acgggtttaacccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataagttcattatacaattagg 22337269  T
Q  313 catctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgca 372  Q
    ||||||||||||||||||||||||||   ||||||||||||| |||||||  |||||||||||    
T  22337270 catctaaaggaacataaaacatgcatcaacaacaacaattcatctcattctcacaatcttgca 22337332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 22340708 - 22340870
Alignment:
Q  214 acggttttcacccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  22340708 acgggtttaacccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataagttcattatacaattagg 22340807  T
Q  313 catctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgca 372  Q
    ||||||||||||||||||||||||||   ||||||||||||| |||||||  |||||||||||    
T  22340808 catctaaaggaacataaaacatgcatcaacaacaacaattcatctcattctcacaatcttgca 22340870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 22750802 - 22750925
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22750802 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 22750901  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  22750902 acataaaacatgcatcaacaacaa 22750925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 42961227 - 42961378
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42961227 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 42961326  T
Q  324 acataaaacatgcat---caacaacaattcaactcattccaacaatcttgca 372  Q
    |||||||||||||||   ||||||||||||| |||||||  |||||||||||    
T  42961327 acataaaacatgcatcaacaacaacaattcatctcattctcacaatcttgca 42961378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 38144929 - 38144806
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38144929 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 38144830  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    |||||||||||||||||| |||||    
T  38144829 acataaaacatgcatcaagaacaa 38144806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 19512048 - 19512171
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  19512048 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaagga 19512147  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  19512148 acataaaacatgcatcaacaacaa 19512171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 5451398 - 5451322
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctta 121  Q
    |||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||| | ||| ||||||    
T  5451398 cgcttaagcgtccacctgcacgcttaagcgtgaaagttctagtagctactgtgactgcacgcttgcgagcacgctta 5451322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 6456386 - 6456507
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||| ||| || || | ||| || ||||| || ||||||||||| || |||||||||||||||| ||||||||||| ||    
T  6456386 tcgcttaagcgaacagtcataattcggcagaaaaata-ttatgggtttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatat 6456484  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||| ||||    
T  6456485 gtttccaaagtttgtttacaggt 6456507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 23493734 - 23493803
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||| |||||||||||| |||||||||||||    
T  23493734 tttttcacccaaaatccccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttataggtt 23493803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 23414941 - 23415013
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaa 300  Q
    ||||||||||| || ||| |||||||||||| ||||||||||| |||||||||||||||||||| | ||||||    
T  23414941 tttttcacccaaaattcctaattttgatctcccaatgcccaaatatgtttccaaagattgtttacatgttcaa 23415013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 24083839 - 24083961
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| |  ||| ||||||||| || |||  |||||| ||||| || ||||||||  | || ||| |||||||||||| ||||||||||| ||    
T  24083839 tcgcttaagcgaacggtcataattctgcagaaaaaatattacgggtttcaaccctttttcacttaaaattccaaattttgatctcccaatgcccaaatat 24083938  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||| ||||    
T  24083939 gtttccaaagtttgtttacaggt 24083961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 11763939 - 11763870
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    |||| |||||| || |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||    
T  11763939 ttttgcacccaaaattcccaattttgatctcccaacgcccaaatatgtttccaaagattgtttacaggtt 11763870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 296
Target Start/End: Complemental strand, 5451279 - 5451207
Alignment:
Q  224 cccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| ||| || |||||||||||||||| ||||||| ||| |||||||||||| ||||||| ||||    
T  5451279 cccatttttcatccaaaattcccaattttgatctcccaatgcctaaatatgtttccaaagtttgtttacaggt 5451207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 23493623 - 23493687
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgctta 109  Q
    |||||||||| |||||||||||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  23493623 cgcttaagcgcccacctgcacgcttaagcgtgcaagttccaaaagctactgtgaatgcacgctta 23493687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 3673678 - 3673745
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| ||  ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  3673678 ttttcacccaaaatccccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 3673745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 22882186 - 22882308
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataact-cccaattttgatctcacaatgcccaaaca 272  Q
    ||||||||||||  | ||| ||||||||| || || | |||||| ||||| || ||||||| ||| || | ||||||||||||||| ||||||||||| |    
T  22882186 tcgcttaagcgaatagtcataattctgcagaaaaata-ttacgggtttcaaccctttttcatccaaaaattcccaattttgatctctcaatgcccaaata 22882284  T
Q  273 tgtttccaaagattgtttataggt 296  Q
    ||||||||||| ||||||| ||||    
T  22882285 tgtttccaaagtttgtttacaggt 22882308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 26560235 - 26560168
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| || || ||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  26560235 ttttcacccaaaattctcaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 26560168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 19873658 - 19873720
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttt 290  Q
    ||||||||||| || |||||||||||||||| ||| ||||||| |||||||||||| ||||||    
T  19873658 tttttcacccaaaattcccaattttgatctctcaacgcccaaatatgtttccaaagtttgttt 19873720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 23234902 - 23234849
Alignment:
Q  243 tcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  23234902 tcccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 23234849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 32966617 - 32966501
Alignment:
Q  178 ttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgttt 277  Q
    |||||||| |||||| | ||||||| ||  || ||||||| ||||| ||  |||| ||||| ||  ||||||||||||||| |||||||||||  |||||    
T  32966617 ttaagcgaacattcatagttctgcagaa--aatgttacgggtttcaacccctttttacccaaaatccccaattttgatctcccaatgcccaaatgtgttt 32966520  T
Q  278 ccaaagattgtttataggt 296  Q
    ||| |||||||||| ||||    
T  32966519 ccagagattgtttacaggt 32966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 37983162 - 37983225
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaa 270  Q
    |||| |||||| ||||| |||||||||||| | || |||||||||||||||| |||||||||||    
T  37983162 aaaaattacgggtttcaaccatttttcaccaaaaattcccaattttgatctcccaatgcccaaa 37983225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 3673573 - 3673623
Alignment:
Q  64 acgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagc 114  Q
    |||||||||||| ||| ||| |||||||| |||||||||||||||||||||    
T  3673573 acgcttaagcgtgcaagttctagtagctattgtgactgcacgcttaccagc 3673623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 11965790 - 11965879
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || |||||||| || || || ||||||||||||  ||| ||||||| |||||||||||| ||||||| ||||    
T  11965790 aaaacttacgggtttcaaccctttttcactcaaaaatctcaattttgatcttccaaggcccaaatatgtttccaaagtttgtttacaggt 11965879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 7728193 - 7728308
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || || | |||||| ||||| ||  |||| ||||| ||  ||||||||||||||| ||| |||||||  |    
T  7728193 tcgcttaagcgaacagtcataattctgcagaaaaata-ttacgggtttcaacccctttttacccaaaatccccaattttgatctcccaaagcccaaatgt 7728291  T
Q  274 gtttccaaagattgttt 290  Q
    ||||||| |||||||||    
T  7728292 gtttccagagattgttt 7728308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 16595281 - 16595401
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||| |||||||| |||| | ||||||| ||  || ||||||| ||||| ||  |||| ||||| ||| ||||||||||||||| ||||| |||||  |    
T  16595281 tcgctcaagcgaccgttcatagttctgcagaa--aatgttacgggtttcaacctctttttacccaaaacccccaattttgatctctcaatgtccaaaagt 16595378  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  16595379 gtttccagaggttgtttacaggt 16595401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 18408269 - 18408215
Alignment:
Q  293 aggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    ||||||| | ||||| |||||||||||||||||| |||||| |||| ||||||||    
T  18408269 aggttcattgtacaactaggcatctaaaggaacacaaaacaggcattaacaacaa 18408215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 21616843 - 21616884
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaa 270  Q
    |||||||||| ||| ||||||||||||||| |||||||||||    
T  21616843 ttttcacccaaaacccccaattttgatctcccaatgcccaaa 21616884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 29917723 - 29917835
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaag-ttacggttttcacccatttttcacccataactcccaattttgatct--cacaatgcccaaa 270  Q
    |||||||||||| || ||| | ||||||| || ||||  |||| | ||||| || ||||||||||| || ||| |||||||||||  | |||||||||||    
T  29917723 tcgcttaagcgatcagtcatagttctgcagaaaaaaaaattacaggtttcaaccctttttcacccaaaattccaaattttgatctcccccaatgcccaaa 29917822  T
Q  271 catgtttccaaag 283  Q
     ||||||||||||    
T  29917823 tatgtttccaaag 29917835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 16835731 - 16835663
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||| ||| || || ||||||||||||  ||| ||||||| |||||||||||| ||||||| ||||    
T  16835731 tttttcatccaaaattctcaattttgatcttccaacgcccaaatatgtttccaaagtttgtttacaggt 16835663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 19862021 - 19862105
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| ||  |||||||||| ||   |||||||||||||| |||||||||||  |||||||| || ||||||| ||||    
T  19862021 ttacgggtttcaaccccttttcacccaaaatctccaattttgatctcccaatgcccaaatgtgtttccagagtttgtttacaggt 19862105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 13 - 395
Target Start/End: Complemental strand, 36038 - 35662
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  36038 aaaattccaaaagtgctggaaaaagaactactcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtaactccacgcttacca 35939  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaatt-ctgcataacaaaag 211  Q
    |||||||||||||||||||||||||||| |||||||||| || ||        |||||| |||||||||||||||||||| |||| ||||| || ||| |    
T  35938 gctcgcttacagcacgcttaagcgtgcagtcatcagacaaca-ct--------ttgcagcgtcgcttaagcgaccattcagaatttctgcagaa-aaatg 35849  T
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattag 311  Q
    |||||| || ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35848 ttacgggttccacccctttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattag 35749  T
Q  312 gcatctaaaggaacataaaacatgcatcaaca---acaattcaactcattccaacaatcttgcataacctctcaaattctctccaac 395  Q
    ||||||||||||||||||||||||||||||||   |||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  35748 gcatctaaaggaacataaaacatgcatcaacaacaacaattcggctcattccaacaatcttgcataatctctcaaattctctccaac 35662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 367
Target Start/End: Complemental strand, 34607 - 34525
Alignment:
Q  288 tttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatc 367  Q
    |||| |||||||||| |||| |||||||||||||||||| |||||| ||||   |||||||||||||  |||||| |||||||    
T  34607 tttacaggttcaatacacaactaggcatctaaaggaacacaaaacaagcattaacaacaacaattcagatcattctaacaatc 34525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 296
Target Start/End: Complemental strand, 6774899 - 6774624
Alignment:
Q  21 aaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctt 120  Q
    |||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  6774899 aaaagtgctggaaaaagaactgcacgcttaagtgtccaccagcacgcttaagcgtccaacttccagtagctactatgactgcacgcttaccagctcgctt 6774800  T
Q  121 acagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttt 220  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6774799 acagcacgcttaagcgtgcattcatcagacaacaactagtgtcgcttgcagagtcgcttaagcaaccattcaaaattctgcataacaaaagttacgggtt 6774700  T
Q  221 tcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  6774699 tcacccatttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagaatgtttataggt 6774624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 296
Target Start/End: Original strand, 24548596 - 24548867
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24548596 aaaatttcaaaagtgctggaaaaagaactgcacgcttaagcgtccacctgcacgcttaagcgtccaacttccagtagctactgtgactgcacgcttacca 24548695  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||| |||||||||    
T  24548696 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagc------------gtcgcttaagcgaccattcaaaattctgcagaacaaaagt 24548783  T
Q  213 tacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  24548784 tacgggtttcacccatttttcacccaaaactcccaattttgatctcccaatacccaaacatgtttccaaagaatgtttataggt 24548867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 214 - 347
Target Start/End: Complemental strand, 8728138 - 8728004
Alignment:
Q  214 acggttttcacccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8728138 acgggtttaacccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattagg 8728039  T
Q  313 catctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||||||||||||||||||||||||||||||||    
T  8728038 catctaaaggaacataaaacatgcatcaacaacaa 8728004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 44477285 - 44477408
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  44477285 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaagga 44477384  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  44477385 acataaaacatgcatcaacaacaa 44477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 44492443 - 44492566
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  44492443 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaagga 44492542  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  44492543 acataaaacatgcatcaacaacaa 44492566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 21840125 - 21840236
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||||||||||   ||||||||||||||||| |||||||||||   ||||||||||||| ||||||||||| |||||||| || ||||||    
T  21840125 tgtttacaggttcaatatacagcaaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagctcattccaacgatcttgcaaaatctctca 21840224  T
Q  383 aattctctccaac 395  Q
    |||| ||||||||    
T  21840225 aatt-tctccaac 21840236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 21931421 - 21931532
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||||||||||   ||||||||||||||||| |||||||||||   ||||||||||||| ||||||||||| |||||||| || ||||||    
T  21931421 tgtttacaggttcaatatacagcaaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagctcattccaacgatcttgcaaaatctctca 21931520  T
Q  383 aattctctccaac 395  Q
    |||| ||||||||    
T  21931521 aatt-tctccaac 21931532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 24267734 - 24267855
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| |||| |||| || || | |||||||||||| || ||||||||||| || |||||||||||||||| ||||||||||| ||    
T  24267734 tcgcttaagcgaacaatcataattatgcagaaaaata-ttacggttttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatat 24267832  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||| ||||    
T  24267833 gtttccaaagtttgtttacaggt 24267855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 38636130 - 38636009
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || || | |||||| ||||| |||||||||||||| || |||||||||||||||| ||||||| ||| ||    
T  38636130 tcgcttaagcgaacagtcataattctgcagaaaaata-ttacgggtttcaaccatttttcacccaaaattcccaattttgatctctcaatgcctaaatat 38636032  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||| ||||    
T  38636031 gtttccaaagtttgtttacaggt 38636009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 37654101 - 37653979
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || |||  |||| | ||||| ||  |||||||||| || |||||| ||||||||| ||||||||||| ||    
T  37654101 tcgcttaagcgaacagtcataattctgcagaaaaaatattacaggtttcaaccccttttcacccaaaattcccaaatttgatctcccaatgcccaaatat 37654002  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||||||||    
T  37654001 gtttccaaagtttgtttataggt 37653979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 19331769 - 19331708
Alignment:
Q  235 cccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||    
T  19331769 cccaaaactcccaattttgatctcccaatgcccaaatatgtttccaaagtttttttataggt 19331708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 22742523 - 22742639
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| |||||| || || || | |||||  ||||| || ||||||||||| || || ||||||||||||| ||||||||||| ||    
T  22742523 tcgcttaagcgaacagtcataattctacagaaaaata-ttacgagtttcaaccctttttcacccaaaattctcaattttgatctcccaatgcccaaatat 22742621  T
Q  274 gtttccaaagattgttta 291  Q
    |||||||||| |||||||    
T  22742622 gtttccaaagtttgttta 22742639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 389
Target Start/End: Original strand, 19750274 - 19750380
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatca---acaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||  |||| ||| ||||||||||||||||| |||||||||||||   ||||||||||| || ||||||||| ||||| | |  ||||||    
T  19750274 tgtttacaggttctgtatataataaggcatctaaaggaacacaaaacatgcatcaactacaacaattcatcttattccaacactcttgtaaattctctca 19750373  T
Q  383 aattctc 389  Q
    |||||||    
T  19750374 aattctc 19750380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 33611500 - 33611416
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| | |||||||||||| || || ||||||||||| |||||||||||||  |||||||| || ||||||||||||    
T  33611500 ttacgggtttcaacaatttttcacccaaaattctcaattttgatcccacaatgcccaaatgtgtttccagagtttgtttataggt 33611416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 17345413 - 17345455
Alignment:
Q  254 atctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  17345413 atctcccaatgcccaaacatgtttccaaagattgtttataggt 17345455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 296
Target Start/End: Complemental strand, 18041973 - 18041896
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||||| | || | |||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  18041973 tttcaaccctttttcaccaaaaatttccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 18041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 29643718 - 29643657
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| |||||||| |||||||||||||||| |||||| ||||||    
T  29643718 tgtttacaggttcaatacacaactaggcatcaaaaggaacataaaacaggcatcatcaacaa 29643657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 17285040 - 17285161
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || || | |||||| ||||| ||  |||||||||| ||| ||||||||||||||  |||||||||||  |    
T  17285040 tcgcttaagcgaacagtcatagttctgcagaaaaata-ttacgggtttcaaccccttttcacccaaaacccccaattttgatcttccaatgcccaaatgt 17285138  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  17285139 gtttccagaggttgtttacaggt 17285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 14056895 - 14056834
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||| | ||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  14056895 tgtttacaggtcctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 14056834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 18261884 - 18261835
Alignment:
Q  247 aattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  18261884 aattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 18261835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 31194763 - 31194678
Alignment:
Q  211 gttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||| ||||| ||  |||||||||| ||  ||||||||||||| | |||||||||||  |||||||| || ||||||||||||    
T  31194763 gttacgggtttcaaccccttttcacccaaaatccccaattttgatcccccaatgcccaaatgtgtttccagaggttgtttataggt 31194678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 22497641 - 22497573
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| || |||||||||||||||| ||| ||||||| || |||| |||| ||||||| ||||    
T  22497641 tttttcacccaaaattcccaattttgatctcccaacgcccaaatatttttctaaagtttgtttacaggt 22497573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 25295993 - 25296064
Alignment:
Q  225 ccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||  ||  || |||||||||||| ||| ||||||| |||||||||| ||||||||| ||||    
T  25295993 ccatttttcaccccaaaacccaaattttgatctcccaacgcccaaatatgtttccaaggattgtttacaggt 25296064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 25758013 - 25758084
Alignment:
Q  225 ccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||  ||  || |||||||||||| ||| ||||||| |||||||||| ||||||||| ||||    
T  25758013 ccatttttcaccccaaaacccaaattttgatctcccaacgcccaaatatgtttccaaggattgtttacaggt 25758084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 23836971 - 23837092
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || || | |||||| ||||| ||  |||||||||| ||| ||||||||||||||  ||||||||||   |    
T  23836971 tcgcttaagcgaacagtcatagttctgcagaaaaata-ttacgggtttcaaccccttttcacccaaaacccccaattttgatcttccaatgcccaagagt 23837069  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||| |||||| ||||||| ||||    
T  23837070 gttcccaaagtttgtttacaggt 23837092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 25111700 - 25111784
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatc 367  Q
    |||||| |||| | ||| |||| || ||||||||||||||| |||||| ||||   |||||||||||||  ||||||||||||||    
T  25111700 tgtttacaggtcctatacacaactatgcatctaaaggaacacaaaacaggcatcaacaacaacaattcagatcattccaacaatc 25111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 24553025 - 24552940
Alignment:
Q  207 aaaagttacggttttca-cccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    |||| |||||| ||||| ||| ||||||| ||| || |||||||||||||||| ||||| ||||| || ||| ||||| |||||||    
T  24553025 aaaacttacgggtttcaacccctttttcatccaaaaatcccaattttgatctctcaatgtccaaatatattttcaaagtttgttta 24552940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 38533476 - 38533541
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttatag 294  Q
    |||||||||| ||  ||||||||||||||| ||| |||||||  ||||||||  ||||||||||||    
T  38533476 ttttcacccaaaatccccaattttgatctcccaaagcccaaaagtgtttccagtgattgtttatag 38533541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 45465570 - 45465481
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || || |||||||||| || ||| |  |||| |||||||||||| ||||||| ||||    
T  45465570 aaaaattacgggtttcaaccctttttcacccaaaaatcacaattttgatgtcccaaggttcaaatatgtttccaaagtttgtttagaggt 45465481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 20709496 - 20709568
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| || ||||||||||| || |||||||| ||||||| |||  |||||| ||||||| |||| |||||||    
T  20709496 tttcaaccctttttcacccaaaattcccaattctgatctcccaacacccaaatatgtttctaaagtttgttta 20709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 296
Target Start/End: Complemental strand, 16479612 - 16479329
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16479612 aaaatttcaaaagtgctggaaaaagaactgcacgcttaagcgtccaccaccacgcttaagcgtccaacttccagtagatactgtgactgcacgcttacca 16479513  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagt 212  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||    
T  16479512 gtttgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgtttgcagcgtcgcttaagcgaccattcaaaattctgcagaacaaaagt 16479413  T
Q  213 tacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16479412 tacgggtttcacccatttttcacccaaaactcccaattttgatctcccaatgcccaaacatgttttcaaagattgtttataggt 16479329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 214 - 347
Target Start/End: Original strand, 15167825 - 15167959
Alignment:
Q  214 acggttttcacccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15167825 acgggtttaacccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattagg 15167924  T
Q  313 catctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||||||||||||||||||||||||||||||||    
T  15167925 catctaaaggaacataaaacatgcatcaacaacaa 15167959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 18873021 - 18873144
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873021 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 18873120  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  18873121 acataaaacatgcatcaacaacaa 18873144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 10896185 - 10896062
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  10896185 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgttttcaaagattgtttataggttcattatacaattaggcatctaaagga 10896086  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  10896085 acataaaacatgcatcaacaacaa 10896062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 148279 - 148430
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |    
T  148279 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattagacatctaaagaa 148378  T
Q  324 acataaaacatgcatcaa---caacaattcaactcattccaacaatcttgca 372  Q
    ||||||||||||||||||   |||||||||| |||||||  |||||||||||    
T  148379 acataaaacatgcatcaacagcaacaattcatctcattctcacaatcttgca 148430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 60 - 296
Target Start/End: Complemental strand, 47481636 - 47481409
Alignment:
Q  60 ctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgcttacagcacgcttaagcgtgcattcatcagacagcaactag 159  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||      
T  47481636 ctgctcgcttaagcgtccaaattccagtagctactgtaactacacgcttacgagctcgcttacagaacgcttaagcgtgcagtcatcagacagc-act-- 47481540  T
Q  160 cgtcgcttgcagagtcgcttaagcgaccattcaaaa-ttctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctc 258  Q
          |||||| ||||||||||||||||||||||| ||||||| || ||| ||||||| || ||||| ||||||||||| ||||||||||||||||| |    
T  47481539 ------ttgcagcgtcgcttaagcgaccattcaaaatttctgcagaa-aaatgttacgggttccacccctttttcacccaaaactcccaattttgatccc 47481447  T
Q  259 acaatgcccaaacatgtttccaaagattgtttataggt 296  Q
     || ||||||||  |||| |||||   |||||||||||    
T  47481446 tcattgcccaaaggtgttcccaaatgatgtttataggt 47481409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 14422646 - 14422769
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  14422646 ccatttttcaccccaaaactcccaatttcgatctcccaatgcccaaacatgtttccaaagattgtttataggttcatcatacaattaggcatctaaagga 14422745  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  14422746 acataaaacatgcatcaacaacaa 14422769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 214 - 347
Target Start/End: Original strand, 16009228 - 16009362
Alignment:
Q  214 acggttttcacccatttttcac-ccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||| ||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  16009228 acgggtttaacccatttttcactccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttctttatacaattagg 16009327  T
Q  313 catctaaaggaacataaaacatgcatcaacaacaa 347  Q
    ||| ||||||||||||||||| |||||||||||||    
T  16009328 catttaaaggaacataaaacacgcatcaacaacaa 16009362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 14566879 - 14567014
Alignment:
Q  240 aactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat- 338  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||     
T  14566879 aactcccaattttgatctcccaatgcccaaacatgttttcaaagattgtttacaggttcattatacaattaggcatctaaaggaacataaaacatgcatc 14566978  T
Q  339 --caacaacaattcaactcattccaacaatcttgca 372  Q
      ||||||||||||| |||||||  |||||||||||    
T  14566979 aacaacaacaattcatctcattctcacaatcttgca 14567014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 46625683 - 46625795
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctc- 381  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||| ||||||||| |||||     
T  46625683 tgtttacaggttcaatatacaactaggcatctaaaggaacataaaacatgcatcaacaacaacaattcagctcattccaacaa-cttgcataatctctca 46625781  T
Q  382 aaattctctccaac 395  Q
    ||||||||||||||    
T  46625782 aaattctctccaac 46625795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 13320770 - 13320899
Alignment:
Q  166 ttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgc 265  Q
    |||||| ||||||||||||||||||||||||||| ||  | ||| ||||||| ||  |||| ||||||||||| |||||||||||||||| || | || |    
T  13320770 ttgcagcgtcgcttaagcgaccattcaaaattctacagca-aaatgttacgggttctacccctttttcacccaaaactcccaattttgatttcccgatac 13320868  T
Q  266 ccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||| |||||||||||||| ||||||    
T  13320869 ccaaacatgcttccaaagattgttgataggt 13320899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 13377233 - 13377297
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgctta 109  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  13377233 cgcttaagcgtccacctgcacgcttaagcgtgcaagttccagtagctactatgactgcacgctta 13377297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 9321488 - 9321399
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || || ||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  9321488 aaaacttacgggtttcaaccctttttcacccaaaaatctcaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 9321399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 14935169 - 14935246
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||||||| || |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  14935169 tttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 14935246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 15358604 - 15358681
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||||||| || |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  15358604 tttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 15358681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 15362762 - 15362839
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||||||| || |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  15362762 tttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 15362839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 13618541 - 13618613
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaa 300  Q
    ||||||||||| || ||| |||||||||||| ||||||||||| |||||||||||||||||||| | ||||||    
T  13618541 tttttcacccaaaattcctaattttgatctcccaatgcccaaatatgtttccaaagattgtttacatgttcaa 13618613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 4484420 - 4484483
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgctt 108  Q
    ||||||||| ||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  4484420 cgcttaagcttcctcctgcacgctgaagcgtgcaagttccagtagctactgtgactgcacgctt 4484483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 13664654 - 13664715
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  13664654 tgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 13664715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 13679217 - 13679278
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||| | || |||||||||||||||||| |||||| |||||||||||||    
T  13679217 tgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcatcaacaacaa 13679278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 31500932 - 31501048
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||  || ||| |||||||||||| || | |||||| ||||| |  ||||||||||| || ||||||||||||| ||  |||||||||| ||    
T  31500932 tcgcttaagcggacagtcataattctgcataaaaata-ttacgggtttcaacgctttttcacccaaaaatcccaattttgatatcttaatgcccaaatat 31501030  T
Q  274 gtttccaaagattgttta 291  Q
    |||||||||| |||||||    
T  31501031 gtttccaaagtttgttta 31501048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 13389552 - 13389618
Alignment:
Q  230 tttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||| |||||||||||||| |||| |||||||||||  |||||||| || ||||||||||||    
T  13389552 tttcacccaaaactcccaattttgttctcccaatgcccaaatgtgtttccagaggttgtttataggt 13389618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 4438583 - 4438699
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || || | |||||| ||||| || ||||||| ||| ||  ||||||||||||||| | ||||||||| ||    
T  4438583 tcgcttaagcgaacagtcatagttctgcagaaaaata-ttacgggtttcaaccctttttcatccaaaatccccaattttgatctccccatgcccaaatat 4438681  T
Q  274 gtttccaaagattgttta 291  Q
    |||||||||| |||||||    
T  4438682 gtttccaaagtttgttta 4438699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 14940515 - 14940631
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||| | || || | |||||| ||||| |  ||||||||||| || |||||||||||||||| ||||||||||| ||    
T  14940515 tcgcttaagcgaacaatcataattctgtagaaaaata-ttacgggtttcaacattttttcacccaaaattcccaattttgatctcccaatgcccaaatat 14940613  T
Q  274 gtttccaaagattgttta 291  Q
     ||||||| | |||||||    
T  14940614 ctttccaacgtttgttta 14940631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 15368108 - 15368224
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||| | || || | |||||| ||||| |  ||||||||||| || |||||||||||||||| ||||||||||| ||    
T  15368108 tcgcttaagcgaacaatcataattctgtagaaaaata-ttacgggtttcaacattttttcacccaaaattcccaattttgatctcccaatgcccaaatat 15368206  T
Q  274 gtttccaaagattgttta 291  Q
     ||||||| | |||||||    
T  15368207 ctttccaacgtttgttta 15368224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 4446011 - 4446095
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| ||  |||||||||| ||  ||||||||||||||| | ||||||||| |||||||||||| ||||||| ||||    
T  4446011 ttacgggtttcaacccattttcacccaaaatccccaattttgatctctccatgcccaaatatgtttccaaagtttgtttacaggt 4446095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 9724242 - 9724170
Alignment:
Q  225 ccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    |||||||||||||| || | |||||||||||||| ||| ||||||| |||||| ||||| ||||||| |||||    
T  9724242 ccatttttcacccaaaatttccaattttgatctcccaacgcccaaatatgttttcaaagtttgtttacaggtt 9724170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 13377344 - 13377412
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||| || || |||||||||||||||| ||||| ||||| |||||||||||| ||||||| ||||    
T  13377344 tttttcacacaaaattcccaattttgatctcccaatgtccaaatatgtttccaaagtttgtttacaggt 13377412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 26009970 - 26009906
Alignment:
Q  21 aaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattcca 85  Q
    |||||||||||||||||  | || |||||||||||||||| ||||||||||| |||||| |||||    
T  26009970 aaaagtgctggaaaaagttcagcacgcttaagcgtccaccagcacgcttaagtgtccaacttcca 26009906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 38424025 - 38424097
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| || ||||||||||| ||  ||||||||||||||| ||||||||||| |||||||||| | |||||||    
T  38424025 tttcaaccctttttcacccaaaatccccaattttgatctcccaatgcccaaatatgtttccaacgtttgttta 38424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 45149415 - 45149487
Alignment:
Q  225 ccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    |||||||||||||| || ||||||||||||| ||||||  |||||| ||||||| |||| ||||||| |||||    
T  45149415 ccatttttcacccaaaattcccaattttgatatcacaacacccaaatatgtttctaaagtttgtttacaggtt 45149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 297
Target Start/End: Complemental strand, 17224413 - 17224290
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || |||  |||||| ||||| ||  |||||||||  ||| ||||||||||||||| |||||||||||       
T  17224413 tcgcttaagcgaacagtcatagttctgcagaaaaaatattacgggtttcaaccccttttcacccgaaacccccaattttgatctcccaatgcccaaatgc 17224314  T
Q  274 gtttccaaagattgtttataggtt 297  Q
    ||||||| || ||||||| |||||    
T  17224313 gtttccagagtttgtttacaggtt 17224290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 296
Target Start/End: Original strand, 13274614 - 13274680
Alignment:
Q  230 tttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||| ||  ||||||||||||| | |||||||||||  |||||||| |||||||||||||||    
T  13274614 tttcacccaaaatccccaattttgatccctcaatgcccaaatgtgtttccagagattgtttataggt 13274680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 33559480 - 33559522
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaa 270  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  33559480 tttttcacccaaaactcccaattttgatctcccaatgcccaaa 33559522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 13449270 - 13449181
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || ||||||||||||| || ||| |  |||| |||||||||||| ||||||| ||||    
T  13449270 aaaaattacgggtttcaaccctttttcacccaaaaatcccaattttgatttcccaaggttcaaatatgtttccaaagtttgtttacaggt 13449181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 28390137 - 28390205
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    |||||||||| || |||||||||||||||| ||| |  |||| |||||||||||| ||||||| |||||    
T  28390137 ttttcacccaaaaatcccaattttgatctctcaaggttcaaatatgtttccaaagtttgtttacaggtt 28390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 4484560 - 4484610
Alignment:
Q  246 caattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||||| ||||||||||| |||||||||||  ||||||| ||||    
T  4484560 caattttgatctcccaatgcccaaatatgtttccaaattttgtttacaggt 4484610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 34241664 - 34241543
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || || | |||||| ||||| ||  |||||||||| || | |||||||||||||  |||||||||||  |    
T  34241664 tcgcttaagcgaacagtcatagttctgcagaaaaata-ttacgggtttcaaccccttttcacccaaaatttccaattttgatcttccaatgcccaaatgt 34241566  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  34241565 gtttccagagtttgtttacaggt 34241543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 14230502 - 14230588
Alignment:
Q  284 attgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaaca---attcaactcattccaacaatc 367  Q
    |||||||| |||| | ||| |||| |||||||| ||||||||| |||| |||||| |||||||   ||||| | |||||||||||||    
T  14230502 attgtttacaggtcctatacacaactaggcatcgaaaggaacacaaaatatgcattaacaacatcaattcagcccattccaacaatc 14230588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 395
Target Start/End: Original strand, 14911539 - 14911914
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    |||||| ||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  14911539 aaaattccaaaagtgctg-aaaaagaactgctcgcttaagtgtccacctgcatgcttaagcgtccaaattccagtagctactgtaactccacgcttacca 14911637  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaatt-ctgcataacaaaag 211  Q
    ||||||| ||| |||||||||||||||| |||||||||| || ||        |||||| |||||||||||||||||||| |||| ||||| || ||| |    
T  14911638 gctcgctaacaacacgcttaagcgtgcagtcatcagacaaca-ct--------ttgcagcgtcgcttaagcgaccattcagaatttctgcagaa-aaatg 14911727  T
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattag 311  Q
    |||||| || ||||| ||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  14911728 ttacgggttccacccctttttcacccaaaactcccaattttgatctcccaatgtcgaaacatgtttccaaagattgtttataggttcaatatacaattag 14911827  T
Q  312 gcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctcaaattctctccaac 395  Q
    |||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  14911828 gcatctaaaggaacataaaacatgcatcaacaacaacaattcatctcattccaacaatcttgcataatctctcaaattctctccaac 14911914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 18213427 - 18213550
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18213427 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 18213526  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  18213527 acataaaacatgcatcaacaacaa 18213550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 42 - 296
Target Start/End: Complemental strand, 23270526 - 23270288
Alignment:
Q  42 gctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgcttacagcacgcttaagcgtgcat 141  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||     
T  23270526 gctcgcttaagcgtccatctgcacgcttaagcgtccaagttccagtagctaatgcaactgcacgcttaccagctcgcttacagcacgcttaagcgtgcag 23270427  T
Q  142 tcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataa 241  Q
     ||||        |||        ||| || ||||||||||||||||||||||||| |||| || ||| ||||||| ||| | ||  |||||||||| ||    
T  23270426 acatc--------act--------ttgtagcgtcgcttaagcgaccattcaaaattatgcagaaaaaatgttacgggtttgaaccccttttcacccaaaa 23270343  T
Q  242 ctcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
      ||||||||||||| | |  |||||||| |||||||||||   |||||||||||    
T  23270342 tccccaattttgatccctctttgcccaaatatgtttccaaaacatgtttataggt 23270288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 64 - 293
Target Start/End: Complemental strand, 40886125 - 40885916
Alignment:
Q  64 acgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtc 163  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| |                   ||    
T  40886125 acgcttaagcgtgcaagttccagtagctactgtgactgcacgcttaccatctcgcttacggcacacttaagcgtgcagt-------------------tc 40886045  T
Q  164 gcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaat 263  Q
    |||| ||  ||||||||||||||||||||||||||||||  | ||| |||||||||| || || |||| |||| | ||||||||||||||||| |  |||    
T  40886044 gcttacaacgtcgcttaagcgaccattcaaaattctgcagta-aaatgttacggtttccaacccttttccacctaaaactcccaattttgatcccttaat 40885946  T
Q  264 gcccaaacatgtttccaaagattgtttata 293  Q
    ||||||| ||||||||||||||||||||||    
T  40885945 gcccaaatatgtttccaaagattgtttata 40885916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 15044508 - 15044611
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctta-cagcacgcttaagcgtgcattc 143  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||| |||| |||||| |||||||||||||||| || ||    
T  15044508 cgcttaagtgtccacctgcacgcttaagcgtgcaagttccagtagctactatgattgcacgcttatcagcacgcttaccagcacgcttaagcgtccagtc 15044607  T
Q  144 atca 147  Q
    ||||    
T  15044608 atca 15044611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 15109916 - 15109813
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctta-cagcacgcttaagcgtgcattc 143  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||| ||| |||||||||| |||| |||||| |||||||||||||||| || ||    
T  15109916 cgcttaagtgtccacctgcacgcttaagcgtgcaagttccagtagctactatgattgcacgcttatcagcacgcttaccagcacgcttaagcgtccagtc 15109817  T
Q  144 atca 147  Q
    ||||    
T  15109816 atca 15109813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 38764481 - 38764602
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || || | |||||| ||||| || ||||||||||| || |||||||||||||||| ||||||||||| ||    
T  38764481 tcgcttaagcgaacagtcataattctgcagaaaaata-ttacgggtttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatat 38764579  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||| ||||    
T  38764580 gtttccaaagtttgtttacaggt 38764602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 47535521 - 47535399
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | ||||||| || | | ||||||| ||||| || ||||||||||| || || ||||||||||||| |||||||||||| |    
T  47535521 tcgcttaagcgagcagtcatagttctgcagaaaagatgttacgggtttcaaccctttttcacccaaaattctcaattttgatctcccaatgcccaaacgt 47535422  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  47535421 gtttccagaggttgtttacaggt 47535399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 8834618 - 8834721
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||| || ||||| ||||||||||||||||| |||||||||||   ||||||||||||| || ||||||||| ||||||| |  ||||||    
T  8834618 tgtttacaggttcattacacaataaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagcttattccaacactcttgcaaattctctca 8834717  T
Q  383 aatt 386  Q
    ||||    
T  8834718 aatt 8834721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 370
Target Start/End: Original strand, 15307843 - 15307930
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatca---acaacaattcaactcattccaacaatcttg 370  Q
    |||||| ||||||| |||| ||| ||||||||||||||||||||| |||||||||   |||||||||||||| ||||||||| |||||    
T  15307843 tgtttacaggttcagtatataataaggcatctaaaggaacataaatcatgcatcaattacaacaattcaacttattccaacactcttg 15307930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 15013768 - 15013646
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| | |||| || || |||  |||||| ||||| || ||||||||||| || ||||||||||||||||  |||||||||| ||    
T  15013768 tcgcttaagcgaacagtcatagttctacagaaaaaatattacgggtttcaaccctttttcacccaaaattcccaattttgatctcctaatgcccaaatat 15013669  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  15013668 gtttccagagtttgtttacaggt 15013646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 18240471 - 18240390
Alignment:
Q  215 cggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| | ||| ||||||||||| ||  ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  18240471 cggtttcctcccctttttcacccaaaatccccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 18240390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 15044643 - 15044711
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  15044643 tttttcacccaaaatccccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 15044711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 15109781 - 15109713
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  15109781 tttttcacccaaaatccccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 15109713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 13888366 - 13888421
Alignment:
Q  287 gtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaac 342  Q
    ||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  13888366 gtttacaggttcagtatataataaggcatctaaaggaacataaaacatgcatcaac 13888421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 47468782 - 47468693
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || || ||||||||||||| ||||||||||| |||||| ||||  ||||||| ||||    
T  47468782 aaaacttacgggtttcaaccctttttcacccaaaattctcaattttgatctcccaatgcccaaatatgttttcaaaatttgtttacaggt 47468693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 13590509 - 13590437
Alignment:
Q  225 ccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    |||||||||||||| || | |||||||||||||| ||| ||||||| |||||| ||||| ||||||| |||||    
T  13590509 ccatttttcacccaaaatttccaattttgatctcccaacgcccaaatatgttttcaaagtttgtttacaggtt 13590437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 41256817 - 41256733
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| || ||||||||| | || |||||||||||||||| ||||||||||| ||||||| | || ||||||| ||||    
T  41256817 ttacgggtttcaaccctttttcacctaaaattcccaattttgatctcccaatgcccaaatatgtttcgagagtttgtttacaggt 41256733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 41917160 - 41917088
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| || ||||||| ||| || |||||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  41917160 tttcaaccctttttcatccaaaattcccaattttgatctcccaacgcccaaatatgtttccaaagtttgttta 41917088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 50220386 - 50220314
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| || ||||||||||| || | |||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  50220386 tttcaaccttttttcacccaaaatttccaattttgatctcccaacgcccaaatatgtttccaaagtttgttta 50220314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 13887509 - 13887564
Alignment:
Q  287 gtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaac 342  Q
    ||||| ||||| | |||| ||| |||||||||||||||||||||||||||||||||    
T  13887509 gtttacaggtttagtatataataaggcatctaaaggaacataaaacatgcatcaac 13887564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 7849795 - 7849884
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| || || ||  |||||||||| |||  |||||||| ||| |  ||||||||||| |||||||||||||||||| |||||    
T  7849795 aaaagttacgggttccaacccattttcacccaaaacatccaattttaatcccctaatgcccaaacgtgtttccaaagattgtttttaggt 7849884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 820316 - 820264
Alignment:
Q  244 cccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||||| |  |||||||||| |||||||||||| ||||||||||||    
T  820316 cccaattttgatcccttaatgcccaaatatgtttccaaagtttgtttataggt 820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 27905986 - 27906072
Alignment:
Q  284 attgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaaca---attcaactcattccaacaatc 367  Q
    |||||||| |||| | ||| |||| |||||||| ||||||||| |||  |||||| |||||||   |||||||||||||||||||||    
T  27905986 attgtttacaggtcctatacacaactaggcatcgaaaggaacacaaagtatgcattaacaacatcaattcaactcattccaacaatc 27906072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 41166411 - 41166290
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || || | |||||| ||||| ||  |||| | ||| ||| ||||||||||||||| |||||||| ||  |    
T  41166411 tcgcttaagcgaacagtcataattctgcagaaaaata-ttacgggtttcaacccctttttatccaaaacccccaattttgatctcccaatgcccgaaagt 41166313  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  41166312 gtttccagagtttgtttacaggt 41166290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 15244938 - 15244999
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| ||||||| |||| ||| || |||||||| ||||||||| ||||||||||| ||||    
T  15244938 tgtttacaggttcagtatataataagccatctaaacgaacataaatcatgcatcaaccacaa 15244999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 18240573 - 18240528
Alignment:
Q  64 acgcttaagcgtccaaattccagtagctactgtgactgcacgctta 109  Q
    |||||||||| | ||| ||||||||||||||||||||| |||||||    
T  18240573 acgcttaagcatgcaagttccagtagctactgtgactgtacgctta 18240528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 11847829 - 11847885
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaac 342  Q
    |||||| |||| | |||||||||||| |||||||||||||| ||||||  |||||||    
T  11847829 tgtttacaggtcctatatacaattagacatctaaaggaacacaaaacagtcatcaac 11847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 296
Target Start/End: Original strand, 41393827 - 41394106
Alignment:
Q  17 tttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctc 116  Q
    |||||||||||||||||||||  | || ||||||||| |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41393827 tttcaaaagtgctggaaaaagttctgcacgcttaagcatccaccagctcgcttaagcgtccaacttccagtagctactgtgactgcacgcttaccagctc 41393926  T
Q  117 gcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacg 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393927 gcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcacttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacg 41394026  T
Q  217 gttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    | |||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| | |||||||||||    
T  41394027 ggtttcacccatttttcacccaaaactcccaattttgatctcccaatgcccaaatatgtttccaaataatgtttataggt 41394106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 21 - 296
Target Start/End: Original strand, 45051064 - 45051327
Alignment:
Q  21 aaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctt 120  Q
    |||||||||||||||||  | || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||    
T  45051064 aaaagtgctggaaaaagttctgcacgcttaagcgtccaccagcacgcttaagcgtccaacttccagtagctactgtgactgcacgcttaccagctcagtt 45051163  T
Q  121 acagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttt 220  Q
    ||||||| ||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| || |||||||||||||| ||    
T  45051164 acagcacccttaagcgtgcattcatcagacagcaactagc------------gtcgcttaagcgaccattcaaaattctacagaacaaaagttacgggtt 45051251  T
Q  221 tcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  45051252 tcacccatttttcacccaaaactcccaattttgatctcccaatacccaaacatgtttccaaagaatgtttataggt 45051327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 173 - 347
Target Start/End: Original strand, 32651182 - 32651356
Alignment:
Q  173 gtcgcttaagcgaccattcaaaatt-ctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaac 271  Q
    ||||||||||||||||||||||||| ||||| || ||| ||||||| || |||||  |||||||||| ||||||||||||||||||| ||||||||||||    
T  32651182 gtcgcttaagcgaccattcaaaatttctgcagaa-aaatgttacgggttccacccccttttcacccaaaactcccaattttgatctcccaatgcccaaac 32651280  T
Q  272 atgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32651281 atgtttccaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacaggcatcaacaacaa 32651356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 16372601 - 16372763
Alignment:
Q  214 acggttttcacccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattagg 312  Q
    |||| ||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16372601 acgggtttaacccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattagg 16372700  T
Q  313 catctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgca 372  Q
    ||||||||||||||||||||||||||   ||||||||||||| |||||||  |||||||||||    
T  16372701 catctaaaggaacataaaacatgcatcaacaacaacaattcatctcattctcacaatcttgca 16372763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 20437417 - 20437294
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  20437417 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgttttcaaagattgtttataggttcattatacaattaggcatctaaagga 20437318  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  20437317 acataaaacatgcatcaacaacaa 20437294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 8538395 - 8538273
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || |||  |||||| ||||| ||  |||||||  | || || ||||||||||||| ||||||||||| ||    
T  8538395 tcgcttaagcgaacagtcataattctgcagaaaaaatattacgggtttcaacccattttcacaaaaaattctcaattttgatctcccaatgcccaaatat 8538296  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||| ||||    
T  8538295 gtttccaaagtttgtttacaggt 8538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 8603634 - 8603512
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || |||  |||||| ||||| ||  |||||||  | || || ||||||||||||| ||||||||||| ||    
T  8603634 tcgcttaagcgaacagtcataattctgcagaaaaaatattacgggtttcaacccattttcacaaaaaattctcaattttgatctcccaatgcccaaatat 8603535  T
Q  274 gtttccaaagattgtttataggt 296  Q
    |||||||||| ||||||| ||||    
T  8603534 gtttccaaagtttgtttacaggt 8603512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 22143845 - 22143724
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||||| |||| | |||||||| | ||| ||||||| ||||| || ||||||| ||| ||| ||||||||||||| |  ||||||||||  |    
T  22143845 tcgcttaagcgaccgttcatatttctgcatca-aaatgttacgggtttcaaccctttttcatccaaaacccccaattttgatcccctaatgcccaaattt 22143747  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||||||||    
T  22143746 gtttccagagtttgtttataggt 22143724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 25093681 - 25093750
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    ||||||||| | || |||||||||||||||| ||| | ||||| ||||||||||||||||||||||||||    
T  25093681 tttttcacctaaaattcccaattttgatctcccaacgtccaaatatgtttccaaagattgtttataggtt 25093750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 11157815 - 11157926
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| |||||||  | |||| |||||||||||||||||| |||||| | ||   |||||||||||||  |||||| | |||||||||| ||||||||     
T  11157815 tgtttacaggttcagaacacaactaggcatctaaaggaacacaaaacaggtattaacaacaacaattcagatcattctagcaatcttgcaaaacctctc- 11157913  T
Q  383 aattctctccaac 395  Q
    |||||||||||||    
T  11157914 aattctctccaac 11157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 21194775 - 21194897
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||  | ||| | ||||||| || |||  |||||| ||||| || |||||| | || || |||||||||||||||| ||||||||||| ||    
T  21194775 tcgcttaagcgaaaagtcatagttctgcagaaaaaatattacgggtttcaaccctttttcccgcaaaattcccaattttgatctcccaatgcccaaatat 21194874  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||| ||||    
T  21194875 gtttccagagtttgtttacaggt 21194897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 5768615 - 5768554
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttcca 280  Q
    ||||| || ||||||||||| || |||||||||||||||| ||||||||||| |||||||||    
T  5768615 tttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatatgtttcca 5768554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 18712522 - 18712583
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||||||  ||||||||||||    
T  18712522 tgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacagacatcaacaacaa 18712583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 20193860 - 20193932
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaa 300  Q
    ||||||| ||| || ||||||||||||||||  ||  |||||| |||||||||||||||||||| ||||||||    
T  20193860 tttttcatccaaaattcccaattttgatctcctaacccccaaatatgtttccaaagattgtttacaggttcaa 20193932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 49997738 - 49997654
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| |||||||||| ||| ||  ||||||||||||||| ||||| ||||| |||||| ||||| ||||||| ||||    
T  49997738 ttacgggtttcaaccatttttcatccaaaatacccaattttgatctcccaatgtccaaatatgttttcaaagtttgtttacaggt 49997654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 19602870 - 19602990
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| |||||| | ||||||| ||  || ||||||| ||||| ||  |||| ||||| ||  ||||||||||||||| |||||||||||  |    
T  19602870 tcgcttaagcgagcattcatagttctgcagaa--aatgttacgggtttcaacccctttttacccaaaatccccaattttgatctcccaatgcccaaatgt 19602967  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| | |||||||| ||||    
T  19602968 gtttccagaaattgtttacaggt 19602990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 20177001 - 20177064
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||  ||||||||||| |||||||    
T  20177001 tttttcacccaaaatccccaattttgatctcccaatgcccaaatgtgtttccaaagtttgttta 20177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 22829895 - 22829783
Alignment:
Q  177 cttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtt 276  Q
    ||||||||| |||||| | ||||||| ||  || ||||||| ||||| ||  |||||||||| ||  ||||||||||||||| |||||||||||  ||||    
T  22829895 cttaagcgaacattcatagttctgcagaa--aatgttacgggtttcaaccccttttcacccaaaatccccaattttgatctcccaatgcccaaatgtgtt 22829798  T
Q  277 tccaaagattgttta 291  Q
    |||  ||||||||||    
T  22829797 tcctgagattgttta 22829783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 33397167 - 33397227
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgt 288  Q
    ||||||||||| || |||||||||||||||| ||| ||||||  |||||||||||| ||||    
T  33397167 tttttcacccaaaattcccaattttgatctcccaacgcccaattatgtttccaaagtttgt 33397227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 40436710 - 40436638
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| || ||||||||||| || |||||||||||||||| |||  |||||| ||||||| |||| |||||||    
T  40436710 tttcaaccctttttcacccaaaattcccaattttgatctcccaacacccaaatatgtttcaaaagtttgttta 40436638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 37234297 - 37234218
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    |||||| ||||| ||  |||||||||| ||| | ||||||||||||| |||||||||||  |||||||| || |||||||    
T  37234297 ttacgggtttcaaccccttttcacccaaaaccctcaattttgatctcccaatgcccaaatgtgtttccagagtttgttta 37234218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 41229377 - 41229292
Alignment:
Q  212 ttacggttttcacccatttttcacccataa-ctcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| ||  |||||||||| || | ||||||||||||||| |||||||||||  |||||||| || ||||||| ||||    
T  41229377 ttacgggtttcaaccccttttcacccaaaaacccccaattttgatctctcaatgcccaaatgtgtttccagaggttgtttacaggt 41229292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 296
Target Start/End: Complemental strand, 13377276 - 13377192
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| ||  |||||||||| || || ||||||||||||| |||||||||||  ||||| || || ||||||| ||||    
T  13377276 ttacgggtttcaacccattttcacccaaaattctcaattttgatctcccaatgcccaaatgtgttttcagagtttgtttacaggt 13377192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 60 - 296
Target Start/End: Complemental strand, 16849 - 16613
Alignment:
Q  60 ctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgcttacagcacgcttaagcgtgcattcatcagacagcaactag 159  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16849 ctgcacgattaagcgtccaacttctagtagctactgtgactgcacgcttaccagctcgcttacagcacgcttaagcgtgcattcatcagacagcaactag 16750  T
Q  160 cgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctca 259  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||     
T  16749 cttcgcttgcagtgtcgcttaagcgaccattcaaaattctgcataacaaaagttacgggtttcacccatttttcacccaaaactcccaattttgatctcc 16650  T
Q  260 caatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||||||||||||||||| |||||||||||    
T  16649 caatgcccaaacatgtttccaaagaatgtttataggt 16613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 168; Significance: 6e-90; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 13 - 296
Target Start/End: Original strand, 35121 - 35395
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttacca 112  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35121 aaaatttcaaaagtgctggaaaaagaactactcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtaactgcacgcttacca 35220  T
Q  113 gctcgcttacagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaa-ttctgcataacaaaag 211  Q
    ||||||||||||||||||||||| || | |||||||||| | |||        |||||| ||||||||||||||||||||||| ||||| | || ||| |    
T  35221 gctcgcttacagcacgcttaagcatgaagtcatcagacaac-act--------ttgcagcgtcgcttaagcgaccattcaaaatttctgtagaa-aaatg 35310  T
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| |||||||| ||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35311 ttacgggtttcacccctttttcacccaaaactcctaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggt 35395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 173 - 372
Target Start/End: Complemental strand, 71790 - 71588
Alignment:
Q  173 gtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaaca 272  Q
    |||||||||||||||||||||||||   ||  | ||| ||||||| || ||||| ||||||||| | ||||||||||||||||||| ||||||||| |||    
T  71790 gtcgcttaagcgaccattcaaaatttctcaagaaaaatgttacgggttccacccctttttcaccaaaaactcccaattttgatctcccaatgcccataca 71691  T
Q  273 tgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaaca---acaattcaactcattccaacaatctt 369  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||  ||||||||    
T  71690 tgttttcaaagattgtttataggttcattatacaattaggcatctaaaggaacataaaacatgcatcaacaacaacaattcatctcattctcacaatctt 71591  T
Q  370 gca 372  Q
    |||    
T  71590 gca 71588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 7e-56; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 7508349 - 7508223
Alignment:
Q  170 agagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaa 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  7508349 agagtcgcttaagcgaccattcaaaattctgcagaacaaaagttacgggtttcacccatttttcacccaaaactcccaattttgatctcccaatgcccaa 7508250  T
Q  270 acatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||||||||||||||    
T  7508249 acatgtttccaaagattgtttataggt 7508223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 6260569 - 6260418
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260569 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 6260470  T
Q  324 acataaaacatgcatcaaca---acaattcaactcattccaacaatcttgca 372  Q
    ||||||||||||||||||||   |||||||| |||||||  |||||||||||    
T  6260469 acataaaacatgcatcaacaacaacaattcatctcattctcacaatcttgca 6260418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 19661846 - 19661723
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19661846 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 19661747  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  19661746 acataaaacatgcatcaacaacaa 19661723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 9242621 - 9242771
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9242621 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatct-aagga 9242719  T
Q  324 acataaaacatgcat---caacaacaattcaactcattccaacaatcttgca 372  Q
    |||||||||||||||   ||||||||||||| |||||||  |||||||||||    
T  9242720 acataaaacatgcatcaacaacaacaattcatctcattctcacaatcttgca 9242771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 6483380 - 6483503
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  6483380 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaagga 6483479  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  6483480 acataaaacatgcatcaacaacaa 6483503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 6486847 - 6486970
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  6486847 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaagga 6486946  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  6486947 acataaaacatgcatcaacaacaa 6486970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 25265899 - 25265768
Alignment:
Q  166 ttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccattttt-cacccataactcccaattttgatctcacaatg 264  Q
    |||||| |||||||||| ||||||||||||||||| | || ||| ||||||| |||||||| ||||| || ||| ||||| ||||||||||||| |||||    
T  25265899 ttgcagtgtcgcttaagtgaccattcaaaattctgtagaaaaaatgttacgggtttcaccccttttttcatccaaaactctcaattttgatctcccaatg 25265800  T
Q  265 cccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||||| |||||||||||||    
T  25265799 cccaaacatgtttccaaatattgtttataggt 25265768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 24661299 - 24661411
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||| |||   |||||||||||||  |||||||||||||||||||||| ||||||    
T  24661299 tgtttacaggttcaatatacaactaggtatctaaaggaacataaaacatacatcaacaacaacaattcagttcattccaacaatcttgcataatctctca 24661398  T
Q  383 aattctctccaac 395  Q
    |||||||||||||    
T  24661399 aattctctccaac 24661411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 19669583 - 19669466
Alignment:
Q  177 cttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtt 276  Q
    ||||||||| |||||| ||||||||| ||  || ||||||| ||||| || ||||||| ||| ||| |||||||||||||||  ||||||||||  ||||    
T  19669583 cttaagcgaacattcataattctgcagaa--aatgttacgggtttcaaccctttttcatccaaaacccccaattttgatctcctaatgcccaaatgtgtt 19669486  T
Q  277 tccaaagattgtttataggt 296  Q
    |||| |||||||||||||||    
T  19669485 tccagagattgtttataggt 19669466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 19666289 - 19666410
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||| ||||||||| | ||||||| || ||| ||||||| ||||| || ||||||||||| | | ||| ||||||||| |  ||||||||||  |    
T  19666289 tcgcttaagtgaccattcatatttctgcagaa-aaatgttacgggtttcaaccctttttcacccaaagccccccattttgatcccctaatgcccaaatgt 19666387  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| || ||||||||||||    
T  19666388 gtttccagagtttgtttataggt 19666410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 24277559 - 24277648
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| |||||||||| ||| || | ||||||||||||||  ||||| |||| |||||||||||| ||||||| ||||    
T  24277559 aaaacttacgggtttcaaccatttttcatccaaaatttccaattttgatctcctaatgctcaaatatgtttccaaagtttgtttaaaggt 24277648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 9636551 - 9636623
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| || ||||||||| | || |||||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  9636551 tttcaaccctttttcacctaaaattcccaattttgatctcccaacgcccaaatatgtttccaaagtttgttta 9636623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 3647 - 3594
Alignment:
Q  243 tcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||||||||| |||||||||||  |||||||| |||||||||| ||||    
T  3647 tcccaattttgatctcccaatgcccaaatgtgtttccagagattgtttacaggt 3594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 16293217 - 16293128
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||| ||| || |||||||||||||||| ||| |  |||| |||||||||||| ||||||| ||||    
T  16293217 aaaaattacgggtttcaaccctttttcatccaaaaatcccaattttgatctcccaaggttcaaatatgtttccaaagtttgtttacaggt 16293128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 23063408 - 23063469
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| ||||||||||   || |||||||||||||||||| |||||| |||||||||||||    
T  23063408 tgtttacaggttcaatacttaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 23063469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 18536573 - 18536636
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||||||||| ||  ||||||||||||| | ||| ||| ||| ||||||||||||||||||||    
T  18536573 tttttcacccaaaatccccaattttgatcgcccaacgcctaaatatgtttccaaagattgttta 18536636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 36982949 - 36982860
Alignment:
Q  166 ttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatc 256  Q
    |||||| ||||||||||||||||||| |||||||| | || ||| ||||||||||| | ||  |||||||||| ||  || ||||||||||    
T  36982949 ttgcagcgtcgcttaagcgaccattccaaattctgtagaa-aaatgttacggttttgaaccccttttcacccaaaatccctaattttgatc 36982860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 24294961 - 24294876
Alignment:
Q  211 gttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||| ||||| ||  |||| ||||| ||  ||||||||||||||| |||||||||||  ||| |||| |||||||||| ||||    
T  24294961 gttacgggtttcaacccctttttacccaaaatccccaattttgatctctcaatgcccaaatgtgtctccagagattgtttacaggt 24294876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Complemental strand, 24341857 - 24341768
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| || || ||  |||||||||| ||||||| ||||| ||| |  ||||||||| | |||||||| | |||||||||||||    
T  24341857 aaaagttacgggttccaacccattttcacccaaaactccccattttaatcccctaatgcccaaccgtgtttccagaaattgtttataggt 24341768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 24561165 - 24561093
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaa 300  Q
    ||||||||||| || |  ||||||||||||  |||   ||||| |||||||||||||||||||| ||||||||    
T  24561165 tttttcacccaaaattttcaattttgatcttccaacatccaaatatgtttccaaagattgtttacaggttcaa 24561093  T

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Target: scaffold0019 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 34099 - 34250
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34099 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaattaggcatctaaagga 34198  T
Q  324 acataaaacatg---catcaacaacaattcaactcattccaacaatcttgca 372  Q
    ||||||||||||   |||||||||||||||| |||||||  |||||||||||    
T  34199 acataaaacatgcatcatcaacaacaattcatctcattctcacaatcttgca 34250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 226 - 372
Target Start/End: Complemental strand, 9166 - 9016
Alignment:
Q  226 catttttca-cccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaa 324  Q
    ||||||||| |||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  9166 catttttcatcccaaaactcccaattttgatctcccaatgccgaaacatgtttccaaagattgtttataggttcattatacaattaagcatctaaaggaa 9067  T
Q  325 cataaaacatgcatcaaca---acaattcaactcattccaacaatcttgca 372  Q
    |||||||||||||||||||   |||||||| |||||||  |||||||||||    
T  9066 cataaaacatgcatcaacaacaacaattcatctcattctcacaatcttgca 9016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 127 - 296
Target Start/End: Complemental strand, 8727 - 8555
Alignment:
Q  127 cgcttaagcgtgcattcatcagacagcaact----agcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttc 222  Q
    ||||||||||  || ||||||||||||||||    ||||||||||| |  |||||||||||||||||||||||||||| | || ||| ||||||| ||||    
T  8727 cgcttaagcgaacagtcatcagacagcaactttgcagcgtcgcttgtatcgtcgcttaagcgaccattcaaaattctgtagaa-aaatgttacgggtttc 8629  T
Q  223 acccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8628 acccctttttcacccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggt 8555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 9901 - 10025
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9901 ccatttttcaccccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaatga 10000  T
Q  324 acataaaacatgca-tcaacaacaa 347  Q
    |||||||||||||| ||||||||||    
T  10001 acataaaacatgcattcaacaacaa 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 111348 - 111471
Alignment:
Q  225 ccatttttcaccc-ataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaagga 323  Q
    ||||||||||||| | ||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  111348 ccatttttcaccccaaaacccccaattttgatctcccaatgcccaaacatgtttccaaatattgtttataggttcattatacaattagacatctaaagga 111447  T
Q  324 acataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||||||||||    
T  111448 acataaaacatgcatcaacaacaa 111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 90276 - 90213
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||||||||| ||  ||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  90276 tttttcacccaaaatacccaattttgatctcccaatacccaaacatgtttccaaagtttgttta 90213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 12183 - 12122
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||| | |||||||| |||||||||||||||||| ||||||  ||||||||||||    
T  12183 tgtttacaggtcctatatacaactaggcatctaaaggaacacaaaacagccatcaacaacaa 12122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 90363 - 90331
Alignment:
Q  81 ttccagtagctactgtgactgcacgcttaccag 113  Q
    |||||||||||||||||||||||||||||||||    
T  90363 ttccagtagctactgtgactgcacgcttaccag 90331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 34953 - 34836
Alignment:
Q  121 acagcacgcttaagcgtgcattcatcagacagcaactagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggttt 220  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||    
T  34953 acagctcgcttaagcgtgcattcatcagacagcaactagcgtcacttgcagcgtcgcttaagcgaccattcaaaattccgcagaacaaaagttacgggtt 34854  T
Q  221 tcacccatttttcaccca 238  Q
    |||||| |||||||||||    
T  34853 tcacccctttttcaccca 34836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34979 - 34937
Alignment:
Q  13 aaaatttcaaaagtgctggaaaaagaaccgctcgcttaagcgt 55  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  34979 aaaatttcaaaagtgctggaaaaagaacagctcgcttaagcgt 34937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 235 - 347
Target Start/End: Complemental strand, 10578 - 10466
Alignment:
Q  235 cccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacat 334  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||     
T  10578 cccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaataagacatctaaaggaacataaaacac 10479  T
Q  335 gcatcaacaacaa 347  Q
    |||||||||||||    
T  10478 gcatcaacaacaa 10466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 235 - 347
Target Start/End: Complemental strand, 1908 - 1796
Alignment:
Q  235 cccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaatatacaattaggcatctaaaggaacataaaacat 334  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||     
T  1908 cccaaaactcccaattttgatctcccaatgcccaaacatgtttccaaagattgtttataggttcattatacaataagacatctaaaggaacataaaacac 1809  T
Q  335 gcatcaacaacaa 347  Q
    |||||||||||||    
T  1808 gcatcaacaacaa 1796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 79; Significance: 8e-37; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 128990 - 128878
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaaca---acaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||   |||||||| ||||||||||||||||||||||| ||||||    
T  128990 tgtttacaggttcaatatacaactaggcatctaaaggaacataaaacatacatcaacaacaacaattcagctcattccaacaatcttgcataatctctca 128891  T
Q  383 aattctctccaac 395  Q
    |||||||||||||    
T  128890 aattctctccaac 128878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 27291 - 27380
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||  || ||||||||||| || || ||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  27291 aaaacttacgggtttctaccctttttcacccaaaattctcaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 27380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 86151 - 86240
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || | ||||||||||||||   |||||||| ||||||||||||| ||||||| ||||    
T  86151 aaaacttacgggtttcaaccctttttcacccaaaatttccaattttgatctcctcatgcccaatcatgtttccaaagtttgtttacaggt 86240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 18763 - 18651
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatca---acaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||||||||| ||||||    
T  18763 tgtttacacgttcaatatacaactaggcatctaaaggaacataaaacattcatcatcaacaacaattcagctcattccaacaatcttgcataatctctca 18664  T
Q  383 aattctctccaac 395  Q
    |||||||||||||    
T  18663 aattctctccaac 18651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 72; Significance: 1e-32; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 296
Target Start/End: Original strand, 18915 - 19090
Alignment:
Q  124 gcacgcttaagcgtgcattcatcagacagcaact----agcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggtt 219  Q
    ||||||||||||||||| |||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  18915 gcacgcttaagcgtgcagtcatcagacaacaactttgcagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgca-aaaaaatgttacggtt 19013  T
Q  220 ttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    || | ||  |||||||||| ||  ||||||||||||| | |  |||||||  |||||||||||   |||||||||||    
T  19014 ttgaaccccttttcacccaaaatccccaattttgatccctctttgcccaattatgtttccaaaacatgtttataggt 19090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 124 - 296
Target Start/End: Original strand, 20999 - 21174
Alignment:
Q  124 gcacgcttaagcgtgcattcatcagacagcaact----agcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgcataacaaaagttacggtt 219  Q
    ||||||||||||||||| |||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||    
T  20999 gcacgcttaagcgtgcagtcatcagacaacaactttgcagcgtcgcttgcagagtcgcttaagcgaccattcaaaattctgca-aaaaaatgttacggtt 21097  T
Q  220 ttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    || | ||  |||||||||| ||  ||||||||||||| | |  |||||||  |||||||||||   |||||||||||    
T  21098 ttgaaccccttttcacccaaaatccccaattttgatccctctttgcccaattatgtttccaaaacatgtttataggt 21174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 18856 - 18923
Alignment:
Q  42 gctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgctta 109  Q
    |||||||||||| |||| || ||||||| ||||| ||| |||||||||||||||  ||||||||||||    
T  18856 gctcgcttaagcttccatctacacgcttcagcgtgcaagttccagtagctactgcaactgcacgctta 18923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 20940 - 21007
Alignment:
Q  42 gctcgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgctta 109  Q
    |||||||||||| |||| || ||||||| ||||| ||| |||||||||||||||  ||||||||||||    
T  20940 gctcgcttaagcttccatctacacgcttcagcgtgcaagttccagtagctactgcaactgcacgctta 21007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 2883 - 2779
Alignment:
Q  45 cgcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctta-cagcacgcttaagcgtgcattc 143  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| || ||    
T  2883 cgcttaaacgtccacctgcacgcttaagcgtgcaggttccagtagctactgtgactgcacgcttactagctcgcttatcatcacgcttaagcgtccagtc 2784  T
Q  144 atcag 148  Q
    |||||    
T  2783 atcag 2779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 2732 - 2680
Alignment:
Q  244 cccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||||| | ||||||||||| |||||||||| | ||||||| ||||    
T  2732 cccaattttgatcccccaatgcccaaatatgtttccaatgtttgtttacaggt 2680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 2148 - 2223
Alignment:
Q  46 gcttaagcgtccacctgcacgcttaagcgtccaaattccagtagctactgtgactgcacgcttaccagctcgctta 121  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  2148 gcttaagcgtccatctgcacgcttaagcgtgcaagttccagtagctactgtgactgcacgcttaccagcacgctta 2223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 2270 - 2338
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| ||  ||||||||||||||| ||||||||||| ||||||| |||| ||||||| ||||    
T  2270 tttttcacccaaaatccccaattttgatctcccaatgcccaaatatgtttctaaagtttgtttacaggt 2338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 457 - 568
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||| ||||||| |||||||||||||||||| |||||||||||   ||||||||||||| ||||||||  |||||||||| || ||||||    
T  457 tgtttacaggttcattatacaactaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcagctcattcccgcaatcttgcaaaatctctca 556  T
Q  383 aattctctccaac 395  Q
    |||| ||||||||    
T  557 aatt-tctccaac 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 79311 - 79432
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||||||||| ||||||||| || ||| ||||| | ||||| || ||||||||||| ||| ||||||||||||| |  ||||||||||  |    
T  79311 tcgcttaagcgaccattcataattctgcagaa-aaatgttacaggtttcaaccctttttcacccaaaacccccaattttgatcccctaatgcccaaatgt 79409  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| |||||||||||||||    
T  79410 gtttccagagattgtttataggt 79432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 1791 - 1903
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||||||   |||||||||||||||||||||  | ||||||||| || |||| |    
T  1791 tgtttacaggttctatatataataaggcatctaaaggaacacaaaacatgcatcaacaacaacaattcaactcattcttaaaatcttgcaaaatctctga 1890  T
Q  383 aattctctccaac 395  Q
    |||| ||||||||    
T  1891 aattttctccaac 1903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 51969 - 52081
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||| || |||| ||||||||| ||||||||||||||| ||||   ||||||||||||| ||||||| |||||||||||| || ||||||    
T  51969 tgtttacaggttcagtacacaactaggcatcttaaggaacataaaacaggcatcaacaacaacaattcagctcattctaacaatcttgcaaaatctctca 52068  T
Q  383 aattctctccaac 395  Q
    || | ||||||||    
T  52069 aactttctccaac 52081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 81546 - 81434
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaaca---acaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||| || |||| ||||||||||||||||||||||||| |||||||||   |||||||| ||||| | |||||||||||| |  ||| ||    
T  81546 tgtttacaggttcagtacacaactaggcatctaaaggaacataaaacaggcatcaacaacaacaattcagctcatactaacaatcttgcaaattctcaca 81447  T
Q  383 aattctctccaac 395  Q
    |||||||||||||    
T  81446 aattctctccaac 81434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 121625 - 121736
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||| |||||||| ||||||||||||||||| |||||||||||   ||||||||||||| || ||||||||| ||||||| |  ||||||    
T  121625 tgtttaaaggttcattatacaataaggcatctaaaggaacacaaaacatgcatcagcaacaacaattcagcttattccaacactcttgcaaattctctca 121724  T
Q  383 aattctctccaac 395  Q
    |||| ||||||||    
T  121725 aatt-tctccaac 121736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 132502 - 132613
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat---caacaacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||| ||||||   ||||||||||||| || ||||||||| ||||||| |  ||||||    
T  132502 tgtttataggttcattatacaataaggcatctaaaggaacacaaaatatgcatcaacaacaacaattcagcttattccaacactcttgcaaattctctca 132601  T
Q  383 aattctctccaac 395  Q
    |||| ||||||||    
T  132602 aatt-tctccaac 132613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 70401 - 70522
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||||||||| || | |||| || ||| ||||||| || ||||| ||||||||||| ||| ||||||||||||| ||  |||| ||||| |    
T  70401 tcgcttaagcgaccattcataaatttgcagaa-aaatgttacgggttccacccctttttcacccaaaacccccaattttgatcccatgatgctcaaacgt 70499  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| | | |||||||||||    
T  70500 gtttccagaaaatgtttataggt 70522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 7201 - 7285
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| |||||||||||||| || | |||||||||||||| ||||| ||||| |||||||||||| ||||||||||||    
T  7201 ttacgggtttcaaccatttttcacccaaaatttccaattttgatctcccaatgaccaaatatgtttccaaagtttgtttataggt 7285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 16626 - 16710
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| |||||||||||||| || | |||||||||||||| ||||| ||||| |||||||||||| ||||||||||||    
T  16626 ttacgggtttcaaccatttttcacccaaaatttccaattttgatctcccaatgaccaaatatgtttccaaagtttgtttataggt 16710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 4405 - 4489
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| || ||||||||||| || |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  4405 ttacgggtttcaaccctttttcacccaaaattcccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 4489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 6695 - 6809
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcat------caacaacaattcaactcattccaacaatcttgcataacctc 379  Q
    |||||| | |||||||||||||| ||||||||||||||||| ||||||| |||      ||||||||||||| ||||||||||| |||||||| || |||    
T  6695 tgtttacaagttcaatatacaataaggcatctaaaggaacacaaaacatacatcaacaacaacaacaattcagctcattccaacgatcttgcaaaatctc 6794  T
Q  380 tcaaattctctccaac 395  Q
    ||||||| ||||||||    
T  6795 tcaaatt-tctccaac 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 1304 - 1233
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggttcaa 300  Q
    |||||||| |||| || ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  1304 ttttcaccgataattcgcaattttgatctcccaatgcccaaatatgtttccaaagattgtatataggttcaa 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 1540 - 1603
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaatt 349  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  1540 tgtttacaggttcaatatacaactaggcatctaaaggaacataaagcatgcagcaacaacaatt 1603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 347 - 395
Target Start/End: Original strand, 12082 - 12130
Alignment:
Q  347 attcaactcattccaacaatcttgcataacctctcaaattctctccaac 395  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  12082 attcagctcattccaacaatcttgcataatctctcaaattctctccaac 12130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 22888 - 22810
Alignment:
Q  177 cttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatc 256  Q
    |||||||||||||||| ||||||||| || ||| ||||||| ||||| || ||||||||||| ||| |||||||||||||    
T  22888 cttaagcgaccattcataattctgcagaa-aaatgttacgggtttcaaccctttttcacccaaaacccccaattttgatc 22810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 2959 - 2848
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaac---aacaattcaactcattccaacaatcttgcataacctctca 382  Q
    |||||| ||||||| ||| |||  ||||||||||||||||| |||||||||||||||   ||||||||| |||||||| |||||||||||  | ||||||    
T  2959 tgtttacaggttcattatgcaacaaggcatctaaaggaacacaaaacatgcatcaacaaaaacaattcagctcattcccacaatcttgcaatatctctca 2860  T
Q  383 aattctctccaac 395  Q
    |||| ||||||||    
T  2859 aatt-tctccaac 2848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 1629 - 1718
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || |||| |||||| || |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  1629 aaaacttacgggtttcaacccttttccacccaaaattcccaattttgatctcccaatgcccaaatatgtttccaaagtttgtttacaggt 1718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 5729 - 5810
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatc 256  Q
    ||||||||||||||||||| ||||||||| || ||| ||||||| ||||| || ||||||||||| ||| |||||||||||||    
T  5729 tcgcttaagcgaccattcataattctgcagaa-aaatgttacgggtttcaaccctttttcacccaaaacccccaattttgatc 5810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 7782 - 7903
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||||| ||| |||||   | || ||| ||||||| ||||| || ||||||||||| ||| ||||||||||||| |  ||||||||||  |    
T  7782 tcgcttaagcgaccactcataattcgatagaa-aaatgttacgggtttcaaccctttttcacccaaaacccccaattttgatcccttaatgcccaaatgt 7880  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||||||||| |||||||||    
T  7881 gtttccaaagattatttataggt 7903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 70781 - 70700
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatc 256  Q
    ||||||||||||||||||| ||||||||| || ||| ||||||| ||||| || ||||||||||| ||| |||||||||||||    
T  70781 tcgcttaagcgaccattcataattctgcagaa-aaatgttacgggtttcaaccctttttcacccaaaacccccaattttgatc 70700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 340 - 279
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||    
T  340 tgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacatgcattaacaacaa 279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 1110 - 1171
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    ||||||||||||||||| | || |||||||||||||||||| |||||| |||||||||||||    
T  1110 tgtttataggttcaatacataactaggcatctaaaggaacacaaaacaggcatcaacaacaa 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 15330 - 15269
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  15330 tgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 15269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 6350 - 6427
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||||||| || || ||||||||||||| ||||||||||| |||||||||||| ||||||| ||||    
T  6350 tttcaaccctttttcacccaaaattctcaattttgatctcccaatgcccaaatatgtttccaaagtttgtttagaggt 6427  T

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Target: scaffold0049 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 33845 - 33776
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    ||||||||||| || |||||||||||||||| ||| ||||||| |||||| ||||||||||||| |||||    
T  33845 tttttcacccaaaattcccaattttgatctcccaacgcccaaatatgttttcaaagattgtttacaggtt 33776  T

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Target: scaffold0020 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 102260 - 102199
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  102260 tgtttacaggttcaatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 102199  T

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Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 107826 - 107894
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| || |||||||||||||||| |||||  |||| |||||||||||| ||||||| ||||    
T  107826 tttttcacccaaaattcccaattttgatctcccaatgaacaaatatgtttccaaagtttgtttacaggt 107894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 1380 - 1313
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||||||| || |||||||||||||||| ||||||||||| ||||| |||||| ||||||| ||||    
T  1380 ttttcacccaaaattcccaattttgatctcccaatgcccaaatatgttcccaaagtttgtttacaggt 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 68374 - 68320
Alignment:
Q  243 tcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||    
T  68374 tcccaattttgatctcccaacgcccaaatatgtttccaaagattgtttacaggtt 68320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 290
Target Start/End: Complemental strand, 103396 - 103281
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    |||||||||||| || ||| ||||||||| || || | |||||| ||||| ||  |||||||||| ||  ||||||||| |||||  || | |||||  |    
T  103396 tcgcttaagcgaacaatcataattctgcaaaaaaata-ttacgggtttcaaccccttttcacccaaaatccccaattttaatctccaaaagtccaaatgt 103298  T
Q  274 gtttccaaagattgttt 290  Q
    |||||||||||||||||    
T  103297 gtttccaaagattgttt 103281  T

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Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 22925 - 22864
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||| | ||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  22925 tgtttacaggtccgatacacaactaggcatctaaaggaacacaaaacatgcatcaacaacaa 22864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 15267 - 15206
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||| | ||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  15267 tgtttacaggtcctatacacaactaggcatctaaaggaacacaaaacaggcatcaacaacaa 15206  T

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Target: scaffold0222 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 16543 - 16604
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||||||| |||| |||||||||||||||||  |||||| |||||||||||||    
T  16543 tgtttacaggttcaatacacaactaggcatctaaaggaacgcaaaacaggcatcaacaacaa 16604  T

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Target: scaffold0165 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 21802 - 21891
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || |||||||||||||||| ||| |  |||| |||||||||||| ||||||| ||||    
T  21802 aaaaattacgggtttcaaccctttttcacccaaaaatcccaattttgatctcccaaggttcaaatatgtttccaaagtttgtttacaggt 21891  T

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Target: scaffold0165; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 29788 - 29856
Alignment:
Q  228 tttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||| || ||| |||||||||||| ||| |  |||| |||||||||||| ||||||| ||||    
T  29788 tttttcacccaaaaatccaaattttgatctcccaaggttcaaatatgtttccaaagtttgtttacaggt 29856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 35284 - 35373
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| ||  |||| ||||| ||||||||||||||||||| |||||||||||  |||||||| || ||||||| ||||    
T  35284 aaaaattacgggtttcaacccctttttacccaaaactcccaattttgatctcccaatgcccaaaagtgtttccagagtttgtttacaggt 35373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 296
Target Start/End: Original strand, 2289 - 2409
Alignment:
Q  177 cttaagcgaccattcaaaattctgcataacaaaag-ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgt 275  Q
    ||||||||| || ||| ||||||||| || ||||  |||||| ||||| ||  |||||||||| ||  ||||||||||||||| |||||||||||  |||    
T  2289 cttaagcgaacagtcataattctgcagaaaaaaatattacgggtttcaaccccttttcacccaaaatccccaattttgatctcccaatgcccaaatgtgt 2388  T
Q  276 ttccaaagattgtttataggt 296  Q
    ||||| || ||||||| ||||    
T  2389 ttccagagtttgtttacaggt 2409  T

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Target: scaffold0670 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 8116 - 8044
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttta 291  Q
    ||||| || ||||||| ||| || |||||||||||||||| ||| ||||||| |||||||||||| |||||||    
T  8116 tttcaaccctttttcatccaaaattcccaattttgatctcccaacgcccaaatatgtttccaaagtttgttta 8044  T

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Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 296
Target Start/End: Complemental strand, 22868 - 22785
Alignment:
Q  213 tacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| ||||| || ||||||| ||| || |||||||||||||||| |||||||||||  |||||||| || ||||||| ||||    
T  22868 tacggatttcaaccttttttcatccaaaattcccaattttgatctcccaatgcccaaatgtgtttccagagtttgtttacaggt 22785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 14729 - 14667
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaagg-aacataaaacatgcatcaacaacaa 347  Q
    ||||||||||| | |||||||| |||| ||||||||| |||||||||||| ||||||||||||    
T  14729 tgtttataggtcctatatacaactaggtatctaaaggaaacataaaacatccatcaacaacaa 14667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 296
Target Start/End: Original strand, 85339 - 85416
Alignment:
Q  219 tttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||| || ||||||| ||| || || ||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||    
T  85339 tttcaaccctttttcatccaaaattctcaattttgatctcccaatgcctaaatatgtttcaaaagtttgtttataggt 85416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 53189 - 53241
Alignment:
Q  244 cccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||||||| |||||||||||  || ||||| || ||||||||||||    
T  53189 cccaattttgatctcccaatgcccaaatgtgcttccagagtttgtttataggt 53241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 3385 - 3446
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||||| ||| |||| |||||||||||||||||| ||||||  ||||||||||||    
T  3385 tgtttacaggttctatacacaactaggcatctaaaggaacacaaaacagccatcaacaacaa 3446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 297
Target Start/End: Complemental strand, 24119 - 24035
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggtt 297  Q
    |||||| ||||| || ||||||||||| || |||||||||||||||| ||||| | ||| ||||||| |||| ||||||| |||||    
T  24119 ttacgggtttcaaccctttttcacccaaaattcccaattttgatctcccaatg-caaaatatgtttctaaagtttgtttacaggtt 24035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 105061 - 104976
Alignment:
Q  211 gttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||| ||||| || ||||||||||| ||| ||||||||||||| |  ||||||||||  |||||||| || ||| ||||||||    
T  105061 gttacgggtttcaaccctttttcacccaaaacccccaattttgatcccctaatgcccaaatgtgtttccagagtttgcttataggt 104976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 296
Target Start/End: Original strand, 119 - 203
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||||| ||||| ||  |||| ||||| ||| ||||||||||||||| |||||||||||  |||||| | || ||||||||||||    
T  119 ttacgggtttcaacctctttttacccaaaacccccaattttgatctcccaatgcccaaatgtgtttcgagagtttgtttataggt 203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 10884 - 10798
Alignment:
Q  284 attgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaaca---attcaactcattccaacaatc 367  Q
    |||||||| |||| | ||| | || |||||||| ||||||||| |||| |||||| |||||||   |||||||||||||||||||||    
T  10884 attgtttacaggtcctatacataactaggcatcgaaaggaacacaaaatatgcattaacaacatcaattcaactcattccaacaatc 10798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 296
Target Start/End: Original strand, 10438 - 10555
Alignment:
Q  177 cttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtt 276  Q
    ||||||||| |||||| ||||||||| ||  || ||||||| ||||| || |||||||| || ||| ||||||||||||| |  ||||||||||  ||||    
T  10438 cttaagcgaacattcataattctgcagaa--aatgttacgggtttcaaccctttttcactcaaaacccccaattttgatcccctaatgcccaaatgtgtt 10535  T
Q  277 tccaaagattgtttataggt 296  Q
    | || ||  |||||||||||    
T  10536 ttcagagtctgtttataggt 10555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 73005 - 73091
Alignment:
Q  284 attgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaaca---attcaactcattccaacaatc 367  Q
    |||||||| |||| | ||| |||| ||| |||| ||||||||| |||| |||||| |||||||   |||||||||||||||||||||    
T  73005 attgtttacaggtcctatacacaactagacatcgaaaggaacacaaaatatgcattaacaacatccattcaactcattccaacaatc 73091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 69307 - 69359
Alignment:
Q  244 cccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||||||| |||||||||||| |||||||| || ||||||| ||||    
T  69307 cccaattttgatctcccaatgcccaaacgtgtttccatagtttgtttacaggt 69359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 6488 - 6555
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| ||||| ||| ||||||||||||||| |||||||||||  |||||||| || ||||||| ||||    
T  6488 tttttacccaaaacccccaattttgatctcccaatgcccaaatgtgtttccagagtttgtttacaggt 6555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 11341 - 11280
Alignment:
Q  286 tgtttataggttcaatatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||| |||| | ||| ||| ||||||||||||||||||| ||||||  ||||||||||||    
T  11341 tgtttacaggtcctatacacagttaggcatctaaaggaacacaaaacagacatcaacaacaa 11280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 296
Target Start/End: Original strand, 9711 - 9830
Alignment:
Q  174 tcgcttaagcgaccattcaaaattctgcataacaaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacat 273  Q
    ||||||||||||||||||| || | |||| || ||| ||||| | |||||||  | ||||||||| ||| ||||||||||||| ||  |||| ||||| |    
T  9711 tcgcttaagcgaccattcataaatttgcagaa-aaatgttacaggtttcacc--tctttcacccaaaacccccaattttgatcgcatgatgctcaaacgt 9807  T
Q  274 gtttccaaagattgtttataggt 296  Q
    ||||||| | | |||||||||||    
T  9808 gtttccagaaaatgtttataggt 9830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 13360 - 13391
Alignment:
Q  265 cccaaacatgtttccaaagattgtttataggt 296  Q
    ||||||||||||||||||||||||||||||||    
T  13360 cccaaacatgtttccaaagattgtttataggt 13391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 347
Target Start/End: Original strand, 111638 - 111685
Alignment:
Q  300 atatacaattaggcatctaaaggaacataaaacatgcatcaacaacaa 347  Q
    |||||||| |||||||||||||||||| ||||||  ||||||||||||    
T  111638 atatacaactaggcatctaaaggaacacaaaacagccatcaacaacaa 111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 16399 - 16321
Alignment:
Q  212 ttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgttt 290  Q
    |||||| ||||| || ||| ||||||| ||  ||||||||| ||||| || | ||||||||||||||||||| ||||||    
T  16399 ttacgggtttcaaccctttctcacccaaaatccccaattttaatctcccactacccaaacatgtttccaaagtttgttt 16321  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 296
Target Start/End: Original strand, 37361 - 37450
Alignment:
Q  207 aaaagttacggttttcacccatttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtttataggt 296  Q
    |||| |||||| ||||| || ||||||||||| || |||||||||||||||| ||| |  |||  ||||||| |||| ||||||| ||||    
T  37361 aaaaattacgggtttcaaccctttttcacccaaaaatcccaattttgatctcccaacgttcaattatgtttctaaagtttgtttacaggt 37450  T

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Target: scaffold0561 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 3206 - 3146
Alignment:
Q  229 ttttcacccataactcccaattttgatctcacaatgcccaaacatgtttccaaagattgtt 289  Q
    |||||||||| || | |||||||||||||  ||| ||||||| |||||||||||| |||||    
T  3206 ttttcacccaaaatttccaattttgatctttcaacgcccaaatatgtttccaaagtttgtt 3146  T

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