View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17045_low_8 (Length: 385)
Name: NF17045_low_8
Description: NF17045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17045_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 13 - 317
Target Start/End: Original strand, 4021909 - 4022213
Alignment:
| Q |
13 |
aaaattttactctagggattatttttcataagaatcaagtttcagttatgatctttttccattttctttggtactgatgtgagagctacaagtacaatat |
112 |
Q |
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| T |
4021909 |
aaaattttactctagggattatttttcataagaatcaagtttcagttatgatcttttcccattttctttggtactgatgtgagtgctacaagtacaatat |
4022008 |
T |
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| Q |
113 |
gtgtggctagtgtgcacttgcaagccattactcttatgggtcaatacataaattatcatgtcacaaaaactttggaccaccaaagtaatggtccatcgtt |
212 |
Q |
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| T |
4022009 |
gtgtggctagtgtgcacttgcaacccattactcgtataggtcaatacataaattattatgtcacataaactttggaccaccaaagtaatggtccatcgtt |
4022108 |
T |
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| Q |
213 |
gtcacttgtcaatttgcaattatgtttaggacacacataactaatactcataatagtgttacaagtagttattaaaatctatgaacctagtccagtgaga |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4022109 |
gtcacttgtcaatttgcaattatgtttaggacacacataactaatactcataatagtgttacaagtagttattaaaatctatgaacctagtccagtgaga |
4022208 |
T |
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| Q |
313 |
tatac |
317 |
Q |
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||||| |
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| T |
4022209 |
tatac |
4022213 |
T |
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