View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17048_high_2 (Length: 333)
Name: NF17048_high_2
Description: NF17048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17048_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 10194414 - 10194107
Alignment:
| Q |
1 |
acgcatttaaagataaatatgatgaaagacaagcgaagtgcaaaagatccgatcactacttatacggtttagggttttct---------tgtcaattata |
91 |
Q |
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| T |
10194414 |
acgcatttaaagataaatatgatgaaagacaagcgaagtgcaaaagatccgatcactacttatacggtttagggttttctggtttttcttgtcaattata |
10194315 |
T |
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| Q |
92 |
atttgcgatttatgatcaaacactgttaggcggcatgttcagtaacagatgagttcgaattccttgatcctgatatcaggatgcctggaatggtgttagg |
191 |
Q |
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| T |
10194314 |
atttgcgatttatgatcaaacactgttaggctgcatgttcagtaacagatgagttcgaattccttgatcctgatatcaggatgcctggaatggtgttagg |
10194215 |
T |
|
| Q |
192 |
gacagaaaattttgataagttccatgttgcagtgaatgcaattgatgcgatgcagtttatgacaaattgcaataccagattatgtactactggtataagg |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10194214 |
gacagaaaattttgataagttccatgttgcagtgaatgcaattgattc-----agtttatgacaaattgcaataccagattatgtactactggtataagg |
10194120 |
T |
|
| Q |
292 |
ttatagaacacat |
304 |
Q |
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||||||||||||| |
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| T |
10194119 |
ttatagaacacat |
10194107 |
T |
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