View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17049_high_15 (Length: 289)
Name: NF17049_high_15
Description: NF17049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17049_high_15 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 3133406 - 3133674
Alignment:
| Q |
1 |
aaacaatagatctttgtctcaagcaatttactggtaaagtcatagagtaaccagagaacgggccaatttgtcggctacaaaatgaaaagtgtaaactact |
100 |
Q |
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| T |
3133406 |
aaacaatagatctttgtctcaagcaatttactggtaaagtcatagagtaactagagaacgggccaatttgtcggctacaaaatgaaaagtgtaaactact |
3133505 |
T |
|
| Q |
101 |
aacaattggtgtgtacttctcatacacttcatgatcatatttctgataagatataatatcaatggaacactgataccttttattttacttaatgtccata |
200 |
Q |
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| T |
3133506 |
aacaattggtgtgtacttctcatacacttcatgatcatatttctgataagatttaatatcaatggaacactgataccttttattttacttaatgtccata |
3133605 |
T |
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| Q |
201 |
atggggtttttcaggctcgattgaatgatattattacctccagtgcaaacacagttgagagcaatggat |
269 |
Q |
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| T |
3133606 |
atgggttttttcaggctcgattgaatgatattattacctccagtgcaaacacagttgagagcaatggat |
3133674 |
T |
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