View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17049_low_17 (Length: 319)
Name: NF17049_low_17
Description: NF17049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17049_low_17 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 11 - 319
Target Start/End: Original strand, 38949773 - 38950081
Alignment:
| Q |
11 |
cataggaatatgaaatttaattataaaatgcccttaaagataaggcagtgactaaattaaaggcaatgctagagctatggaacctaagttaagtacaaga |
110 |
Q |
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| T |
38949773 |
cataggaatatgaaatttaattataaaatgcccttaaagataaggcagtggctaaattaaaggcaatgctagagctatggaacctaagttaagtacaaga |
38949872 |
T |
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| Q |
111 |
atgaataccacaaatcccgatgaatgaattaaagtataaattaatgcaatgcaaagaaagttaggaaaacaaattttatgatatggaccttatgatctaa |
210 |
Q |
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| T |
38949873 |
atgaataccacaaatcccaatgaatgaattaaagtataaattaatgcaatgcaaagaaagttaggaaaacaaattttatgatatggaccttatgatctaa |
38949972 |
T |
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| Q |
211 |
attaagggtcaaacccatacaatttgagtcgtgcgatcttaaatcaatgactgagattattaatgtttgatcttgatttaaaaaatagtagcataggtag |
310 |
Q |
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| T |
38949973 |
attaagggtcaaacccatacaatttgagtcatgcgatcttaaatcaatgactgagattattaatatttgatcttgatttgaaaaatagtagcatacgtag |
38950072 |
T |
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| Q |
311 |
aaattgttg |
319 |
Q |
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| T |
38950073 |
aaattgttg |
38950081 |
T |
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