View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17049_low_26 (Length: 250)

Name: NF17049_low_26
Description: NF17049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17049_low_26
NF17049_low_26
[»] chr7 (34 HSPs)
chr7 (3-237)||(1350114-1350348)
chr7 (14-237)||(1373412-1373635)
chr7 (26-237)||(1358069-1358280)
chr7 (171-237)||(1393725-1393791)
chr7 (170-237)||(1383688-1383755)
chr7 (170-237)||(1389793-1389860)
chr7 (9-81)||(17989051-17989123)
chr7 (21-81)||(27378856-27378916)
chr7 (15-81)||(36370645-36370711)
chr7 (14-115)||(44151476-44151575)
chr7 (9-81)||(12110330-12110402)
chr7 (9-81)||(30456478-30456550)
chr7 (21-67)||(1413120-1413166)
chr7 (14-63)||(5369737-5369786)
chr7 (32-81)||(46104595-46104644)
chr7 (9-81)||(7623108-7623180)
chr7 (26-74)||(25296971-25297019)
chr7 (15-75)||(28340878-28340938)
chr7 (9-81)||(29363488-29363560)
chr7 (9-81)||(31338478-31338550)
chr7 (9-81)||(38010684-38010756)
chr7 (9-81)||(40689014-40689086)
chr7 (9-73)||(44910574-44910638)
chr7 (26-81)||(4966143-4966198)
chr7 (14-81)||(10190770-10190837)
chr7 (6-81)||(47941290-47941365)
chr7 (14-56)||(9527143-9527185)
chr7 (9-75)||(23918927-23918993)
chr7 (7-81)||(47177604-47177678)
chr7 (14-75)||(3559010-3559071)
chr7 (40-81)||(12792591-12792632)
chr7 (15-76)||(39169449-39169509)
chr7 (14-75)||(44917570-44917631)
chr7 (26-78)||(18350738-18350790)
[»] chr5 (33 HSPs)
chr5 (6-114)||(17258880-17258986)
chr5 (26-114)||(32408589-32408675)
chr5 (26-78)||(2569726-2569778)
chr5 (9-73)||(14295476-14295540)
chr5 (26-81)||(13604877-13604932)
chr5 (9-56)||(32059642-32059689)
chr5 (9-76)||(38047888-38047955)
chr5 (39-81)||(3237093-3237135)
chr5 (14-79)||(18543226-18543292)
chr5 (26-123)||(41957439-41957534)
chr5 (26-114)||(21768194-21768280)
chr5 (9-81)||(9202776-9202848)
chr5 (15-122)||(10272420-10272525)
chr5 (14-46)||(13193774-13193806)
chr5 (26-74)||(16945018-16945066)
chr5 (38-82)||(29201532-29201576)
chr5 (30-125)||(32172644-32172737)
chr5 (9-76)||(12975317-12975384)
chr5 (34-81)||(30217077-30217124)
chr5 (14-76)||(8985636-8985698)
chr5 (9-114)||(28586763-28586866)
chr5 (27-81)||(29054896-29054950)
chr5 (39-81)||(32197720-32197762)
chr5 (15-81)||(33234337-33234403)
chr5 (45-114)||(36639528-36639595)
chr5 (27-64)||(18286779-18286816)
chr5 (26-67)||(36181219-36181260)
chr5 (39-80)||(41929729-41929770)
chr5 (25-81)||(2568644-2568700)
chr5 (9-81)||(3970708-3970780)
chr5 (9-81)||(12425541-12425613)
chr5 (9-73)||(36539716-36539780)
chr5 (9-81)||(41016149-41016221)
[»] chr1 (47 HSPs)
chr1 (14-125)||(6231802-6231912)
chr1 (9-81)||(7218102-7218174)
chr1 (18-81)||(44422678-44422741)
chr1 (16-78)||(33527178-33527240)
chr1 (16-81)||(4078177-4078242)
chr1 (9-70)||(37272625-37272686)
chr1 (89-125)||(43771885-43771921)
chr1 (9-115)||(30257653-30257757)
chr1 (18-73)||(47960660-47960715)
chr1 (9-72)||(48830113-48830176)
chr1 (18-127)||(4622072-4622179)
chr1 (26-80)||(25005826-25005880)
chr1 (9-114)||(27887115-27887218)
chr1 (17-70)||(4363671-4363724)
chr1 (32-81)||(4700094-4700143)
chr1 (32-81)||(7137026-7137075)
chr1 (32-81)||(7472304-7472353)
chr1 (9-74)||(17269220-17269285)
chr1 (32-81)||(34290229-34290278)
chr1 (9-81)||(10199436-10199508)
chr1 (9-61)||(10581125-10581177)
chr1 (9-81)||(10854703-10854775)
chr1 (26-125)||(11695848-11695945)
chr1 (9-81)||(34179900-34179972)
chr1 (26-124)||(4549217-4549313)
chr1 (14-81)||(24913438-24913505)
chr1 (9-127)||(29723459-29723575)
chr1 (9-122)||(30259475-30259587)
chr1 (27-121)||(31517730-31517822)
chr1 (26-81)||(35017563-35017618)
chr1 (19-81)||(3924604-3924666)
chr1 (14-80)||(7273968-7274034)
chr1 (14-56)||(15361688-15361730)
chr1 (9-75)||(25006068-25006134)
chr1 (14-75)||(4549576-4549637)
chr1 (14-114)||(6292468-6292566)
chr1 (16-81)||(16322826-16322891)
chr1 (28-81)||(25479570-25479623)
chr1 (9-82)||(44032026-44032099)
chr1 (29-81)||(5592713-5592765)
chr1 (14-74)||(6074449-6074509)
chr1 (14-62)||(8130411-8130459)
chr1 (9-65)||(9656620-9656676)
chr1 (14-54)||(29007771-29007811)
chr1 (9-120)||(36151496-36151605)
chr1 (29-81)||(39347995-39348047)
chr1 (41-81)||(43332486-43332526)
[»] chr3 (36 HSPs)
chr3 (9-125)||(24887270-24887383)
chr3 (20-113)||(20502066-20502157)
chr3 (9-81)||(25453887-25453959)
chr3 (26-114)||(33405163-33405250)
chr3 (26-122)||(3044248-3044342)
chr3 (9-81)||(36101538-36101610)
chr3 (26-121)||(52618990-52619083)
chr3 (9-76)||(33965522-33965591)
chr3 (9-54)||(2201098-2201143)
chr3 (26-74)||(20874339-20874387)
chr3 (15-75)||(43875624-43875684)
chr3 (26-74)||(47904098-47904146)
chr3 (31-125)||(43115048-43115140)
chr3 (26-123)||(1217788-1217883)
chr3 (9-51)||(20192664-20192706)
chr3 (21-114)||(27290898-27290989)
chr3 (17-75)||(27792850-27792908)
chr3 (9-63)||(38462251-38462305)
chr3 (9-62)||(19679375-19679428)
chr3 (32-81)||(22203423-22203472)
chr3 (20-81)||(22343589-22343650)
chr3 (40-81)||(24158531-24158572)
chr3 (9-74)||(28306128-28306193)
chr3 (9-81)||(1816553-1816625)
chr3 (41-81)||(2071058-2071098)
chr3 (9-81)||(2197806-2197878)
chr3 (14-62)||(19679807-19679855)
chr3 (9-81)||(21367637-21367709)
chr3 (17-65)||(21872315-21872363)
chr3 (9-81)||(22232796-22232868)
chr3 (9-81)||(23315596-23315668)
chr3 (9-81)||(24785175-24785247)
chr3 (9-81)||(32064410-32064481)
chr3 (9-81)||(36139848-36139920)
chr3 (8-64)||(42753575-42753631)
chr3 (26-82)||(52440689-52440745)
[»] chr2 (47 HSPs)
chr2 (9-114)||(33256710-33256813)
chr2 (14-123)||(43141846-43141953)
chr2 (14-125)||(43205284-43205393)
chr2 (26-81)||(9395117-9395172)
chr2 (26-81)||(15377752-15377807)
chr2 (9-76)||(28803539-28803606)
chr2 (26-81)||(39983329-39983384)
chr2 (39-81)||(4026817-4026859)
chr2 (15-81)||(13736321-13736387)
chr2 (39-81)||(44644278-44644320)
chr2 (18-75)||(6561340-6561397)
chr2 (36-81)||(10884549-10884594)
chr2 (26-75)||(15780064-15780113)
chr2 (9-81)||(3235412-3235483)
chr2 (15-67)||(13866865-13866917)
chr2 (9-65)||(17952745-17952801)
chr2 (9-81)||(22681213-22681285)
chr2 (15-125)||(1742018-1742126)
chr2 (9-56)||(3102663-3102710)
chr2 (14-77)||(13630313-13630376)
chr2 (14-81)||(16353837-16353903)
chr2 (26-81)||(18066115-18066170)
chr2 (26-81)||(18179268-18179323)
chr2 (26-69)||(25800816-25800859)
chr2 (9-119)||(33942120-33942228)
chr2 (14-81)||(35486391-35486458)
chr2 (26-81)||(43985031-43985086)
chr2 (39-81)||(3049974-3050016)
chr2 (9-79)||(5043590-5043660)
chr2 (15-81)||(25790102-25790168)
chr2 (3-81)||(36415701-36415779)
chr2 (19-81)||(41817148-41817210)
chr2 (9-120)||(1939323-1939432)
chr2 (9-62)||(11513868-11513921)
chr2 (32-81)||(42419990-42420039)
chr2 (15-76)||(42817409-42817470)
chr2 (9-81)||(8017404-8017476)
chr2 (9-81)||(9556209-9556281)
chr2 (89-125)||(11344756-11344792)
chr2 (9-81)||(13869123-13869195)
chr2 (13-81)||(26626847-26626915)
chr2 (21-81)||(30552672-30552732)
chr2 (9-81)||(35485887-35485959)
chr2 (9-81)||(36863653-36863725)
chr2 (15-71)||(37276722-37276778)
chr2 (9-77)||(37292379-37292447)
chr2 (9-56)||(39621923-39621968)
[»] chr6 (32 HSPs)
chr6 (15-121)||(3528779-3528883)
chr6 (26-124)||(4246397-4246493)
chr6 (9-75)||(2117373-2117439)
chr6 (9-81)||(1497951-1498023)
chr6 (177-233)||(7006346-7006402)
chr6 (177-233)||(7009427-7009483)
chr6 (9-81)||(31671102-31671174)
chr6 (15-125)||(10616527-10616635)
chr6 (30-81)||(33911310-33911361)
chr6 (48-82)||(29837111-29837145)
chr6 (9-127)||(281832-281948)
chr6 (26-81)||(1275136-1275191)
chr6 (9-56)||(2027459-2027506)
chr6 (9-72)||(3155146-3155209)
chr6 (14-81)||(13907822-13907889)
chr6 (14-81)||(18264304-18264371)
chr6 (29-75)||(7149507-7149553)
chr6 (26-68)||(10860958-10861000)
chr6 (9-114)||(27894017-27894119)
chr6 (9-121)||(725645-725755)
chr6 (11-80)||(2167989-2168058)
chr6 (11-80)||(2179622-2179691)
chr6 (32-81)||(2735062-2735111)
chr6 (14-55)||(5550107-5550148)
chr6 (26-75)||(24838777-24838826)
chr6 (20-81)||(31324437-31324498)
chr6 (32-76)||(1401102-1401146)
chr6 (9-81)||(4006684-4006756)
chr6 (9-81)||(10400239-10400311)
chr6 (30-78)||(13907409-13907457)
chr6 (9-81)||(33787773-33787845)
chr6 (9-81)||(33887800-33887872)
[»] chr4 (31 HSPs)
chr4 (14-81)||(21157743-21157810)
chr4 (9-81)||(49219109-49219181)
chr4 (16-114)||(23819066-23819162)
chr4 (18-56)||(17883546-17883584)
chr4 (39-81)||(47800623-47800665)
chr4 (39-81)||(56480348-56480390)
chr4 (38-82)||(12650311-12650355)
chr4 (21-81)||(36722697-36722757)
chr4 (38-81)||(1706621-1706664)
chr4 (20-55)||(10365753-10365788)
chr4 (26-81)||(29778782-29778837)
chr4 (32-79)||(35507355-35507402)
chr4 (32-79)||(35507487-35507534)
chr4 (18-81)||(53315305-53315368)
chr4 (9-76)||(54325070-54325137)
chr4 (16-121)||(2996550-2996653)
chr4 (15-81)||(7694038-7694104)
chr4 (31-81)||(25309233-25309283)
chr4 (9-75)||(35958625-35958691)
chr4 (18-76)||(42866047-42866105)
chr4 (42-102)||(3155606-3155664)
chr4 (9-125)||(24929463-24929577)
chr4 (48-81)||(40008546-40008579)
chr4 (15-56)||(41097296-41097337)
chr4 (9-82)||(44319919-44319992)
chr4 (33-81)||(1137706-1137754)
chr4 (9-73)||(3175921-3175985)
chr4 (39-114)||(11264301-11264374)
chr4 (9-81)||(16200009-16200081)
chr4 (45-81)||(21043263-21043299)
chr4 (18-113)||(30207569-30207662)
[»] chr8 (35 HSPs)
chr8 (14-81)||(10075579-10075646)
chr8 (14-81)||(39389204-39389271)
chr8 (9-75)||(6509337-6509403)
chr8 (15-65)||(30013194-30013244)
chr8 (14-114)||(11795067-11795165)
chr8 (9-125)||(41620277-41620391)
chr8 (9-81)||(1470884-1470956)
chr8 (15-114)||(12361168-12361265)
chr8 (40-80)||(25097387-25097427)
chr8 (9-81)||(29973051-29973123)
chr8 (9-81)||(42215334-42215406)
chr8 (14-122)||(43704365-43704473)
chr8 (9-76)||(4763888-4763955)
chr8 (26-81)||(5227522-5227577)
chr8 (14-81)||(9836882-9836949)
chr8 (38-81)||(27028830-27028873)
chr8 (14-81)||(31862468-31862535)
chr8 (35-125)||(31875581-31875669)
chr8 (32-67)||(38537584-38537619)
chr8 (26-81)||(41309772-41309827)
chr8 (15-61)||(28769387-28769433)
chr8 (28-125)||(39551195-39551290)
chr8 (20-74)||(42764248-42764302)
chr8 (16-81)||(1433525-1433590)
chr8 (28-81)||(9562291-9562344)
chr8 (9-121)||(11183515-11183625)
chr8 (38-79)||(40014919-40014960)
chr8 (49-81)||(1470029-1470061)
chr8 (6-74)||(4390180-4390248)
chr8 (9-81)||(4558768-4558840)
chr8 (9-81)||(8062494-8062566)
chr8 (9-81)||(10383855-10383927)
chr8 (27-71)||(30043784-30043828)
chr8 (15-67)||(32143087-32143139)
chr8 (9-81)||(33209248-33209320)
[»] scaffold0024 (1 HSPs)
scaffold0024 (9-62)||(27546-27599)
[»] scaffold0352 (1 HSPs)
scaffold0352 (30-81)||(12060-12111)
[»] scaffold0091 (1 HSPs)
scaffold0091 (26-81)||(6939-6994)
[»] scaffold0020 (1 HSPs)
scaffold0020 (29-127)||(159957-160053)
[»] scaffold0092 (1 HSPs)
scaffold0092 (38-84)||(40230-40276)
[»] scaffold0254 (1 HSPs)
scaffold0254 (11-80)||(2641-2710)
[»] scaffold0110 (1 HSPs)
scaffold0110 (9-61)||(4271-4323)


Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 1350348 - 1350114
Alignment:
Q  3 attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacg 102  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1350348 attgacaaaagaaagtcaaacttttttcacataatctataagctgttttcataaactatcctgaagagcttatgaaaatataagaagaaaacagtttacg 1350249  T
Q  103 gacatgtcataaattgtttccattatgctaataatatactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgcc 202  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1350248 ggcatgtcataaattgtttccattatgctaataatatactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgcc 1350149  T
Q  203 attgcttgtaatggaggtaatgtctttgttgacct 237  Q
    |||||||||||||||||||||||||||||||||||    
T  1350148 attgcttgtaatggaggtaatgtctttgttgacct 1350114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 1373635 - 1373412
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  1373635 aaagtcaaacttttttcatatagtctataacctgttttcataaactatcttgaagggcttatgaaaatataagatgaaaacagtttacggacatgtcata 1373536  T
Q  114 aattgtttccattatgctaataatatactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgccattgcttgtaa 213  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1373535 aattgtttcgattatgctaataacaaactcaaataaactaaaatagtaggcatgttttttctcacctgcatgcagtttactcttccgccattgcttgtaa 1373436  T
Q  214 tggaggtaatgtctttgttgacct 237  Q
    ||||||||||||||||||||||||    
T  1373435 tggaggtaatgtctttgttgacct 1373412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 1358280 - 1358069
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcct--------gaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaatt 117  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  1358280 ttttcatataatctataagctgttttcataaactatcctactatcctgaagagcttatgaaaatataagatgaaaacagtttacagacatgtcataaatt 1358181  T
Q  118 gtttccattatgctaataatatactcaaataaactaaaatagtaggc--atgttttttctcacctgcatgcagtttactcttccgccattgcttgtaatg 215  Q
    |||||||||||||||||          ||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||| ||||||||||||||     
T  1358180 gtttccattatgctaat----------aataaactaaaatagtaggcctattatttttctcacctgcatgcagtttactcttccaccattgcttgtaata 1358091  T
Q  216 gaggtaatgtctttgttgacct 237  Q
    ||||||||||| ||||||||||    
T  1358090 gaggtaatgtccttgttgacct 1358069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 1393791 - 1393725
Alignment:
Q  171 tttctcacctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttgacct 237  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1393791 tttctcacctgcatgcagtttactcttccaccattgcttgtaatggaggtaatgtctttgttgacct 1393725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 1383755 - 1383688
Alignment:
Q  170 ttttctcacctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttgacct 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  1383755 ttttctcacctgcatgcagtttactcttccaccattgcttgtaatggaagtaatgtctttgttaacct 1383688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 1389860 - 1389793
Alignment:
Q  170 ttttctcacctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttgacct 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  1389860 ttttctcacctgcatgcagtttactcttccaccattgcttgtaatggaagtaatgtctttgttaacct 1389793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 17989123 - 17989051
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||||||||||| ||||||  ||||||||||| || |||||||||||||||||||||    
T  17989123 aaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaat 17989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 27378916 - 27378856
Alignment:
Q  21 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||    
T  27378916 aactgttttcatataaactacaatctgttttcataaactatcctggagagcttatgaaaat 27378856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 36370645 - 36370711
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| |||||| |||| ||||||| ||||| ||||||||||||||||||||||||| ||||    
T  36370645 aagttaaactgttttcacataagctataagttgtttccataaactatcctgaagagcttatggaaat 36370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 44151575 - 44151476
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    ||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| |||| |||||||| |||  ||||  |||||||  ||| ||||||||||||    
T  44151575 aaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaa--taagctgaaaacatcttatggacatgtcata 44151478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 12110330 - 12110402
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | ||||  ||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  12110330 aaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaat 12110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 30456550 - 30456478
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | |||||||||||  ||||||  |||||||||||||||| || |||||||||||||||    
T  30456550 aaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaat 30456478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 1413166 - 1413120
Alignment:
Q  21 aacttttttcatataatctataagctgttttcataaactatcctgaa 67  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  1413166 aacttttttcatataatctataagctgtttcaataaactatcttgaa 1413120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 5369786 - 5369737
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcc 63  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  5369786 aaagtcaaactgttttcatatatgctataagctgttttcataagctatcc 5369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 46104644 - 46104595
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| ||||||| ||||||||||| |||| |||||||||||||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaat 46104595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 7623108 - 7623180
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||| |||| |||| |||||| || |||||| ||||||||||||||| ||||||| ||| ||||||    
T  7623108 aaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagtttacgaaaat 7623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 25296971 - 25297019
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    ||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  25296971 ttttcatataaactataagctgttttcataaactaccatgtagagctta 25297019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 28340938 - 28340878
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||||||| | || |||||||| ||||||||||||||||||| |||||||  |||||||||    
T  28340938 aagtcaaattgttgtcatataagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 29363488 - 29363560
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||||||||| |  ||||||||||| ||||||  ||||||| |||||||||| ||||    
T  29363488 aaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaat 29363560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 31338478 - 31338550
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| |||| ||||||  |||||| ||||| |||||||||||||   ||||||||||||||    
T  31338478 aaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcctatggagcttatgaaaat 31338550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 38010684 - 38010756
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||| |||| | ||||||||||| ||||||||||||||||||| |||||||  ||| |||||| ||||    
T  38010684 aaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaat 38010756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 40689086 - 40689014
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| ||| | ||||||||||| ||||||||||| ||||||| |||||||| | | |||||||||||    
T  40689086 aaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaat 40689014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 44910574 - 44910638
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 73  Q
    |||| |||||||||||||||||| | || ||| ||| ||||||||||||||||| || |||||||    
T  44910574 aaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagctt 44910638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 4966143 - 4966198
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||| |  |||||||||||||||||| | ||||||||||||||||| ||||    
T  4966143 ttttcatattaggtataagctgttttcataagccatcctgaagagcttatggaaat 4966198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 10190770 - 10190837
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||||||||| || |||  |||||||||||||||| || || |||||||| ||||    
T  10190770 aaagtcaaactgttttcatataaactgtaaattgttttcataaactattcttaaaagcttatggaaat 10190837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 47941290 - 47941365
Alignment:
Q  6 gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||| || |||||| | ||||  |||||||||||| |||||||||||| |||||| | |||| ||||||||||    
T  47941290 gacaaaataaggtcaaattattttagtataatctataaactgttttcataagctatcccggagagtttatgaaaat 47941365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 9527185 - 9527143
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataa 56  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||    
T  9527185 aaagtcaaactgttttcatataaactataagttgttttcataa 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 23918927 - 23918993
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||| ||||||||| | ||||||||||| |||||| ||||  ||||||||||| |||||| ||||||    
T  23918927 aaaataaagtcaaattgttttcatataagctataatctgtaatcataaactattctgaagggcttat 23918993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 47177604 - 47177678
Alignment:
Q  7 acaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| ||||| ||| | ||||||||||| |||||||||||||||| || ||||| || |||  ||||||||||    
T  47177604 acaaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaat 47177678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 3559010 - 3559071
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    ||||||| ||| ||| |||||||||||||||| |||||||| ||||||| || | |||||||    
T  3559010 aaagtcagactgtttacatataatctataagccgttttcattaactatcttgtatagcttat 3559071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 12792632 - 12792591
Alignment:
Q  40 ataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||    
T  12792632 ataagctattttcataagctatcttgaagagcttatgaaaat 12792591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 39169509 - 39169449
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    |||||| ||| ||||  |||||||||||| |||||||||||| |||||||| ||||||||||    
T  39169509 aagtcagactgtttttgtataatctataaactgttttcataagctatcctg-agagcttatg 39169449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 44917631 - 44917570
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    ||||||||||| ||||  ||||||||||||| ||||| ||||||| ||||| ||||| ||||    
T  44917631 aaagtcaaactgtttttgtataatctataagttgtttccataaaccatcctaaagagattat 44917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 18350790 - 18350738
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaa 78  Q
    ||||| |||||  |||||||||||||||||| ||||| || ||||||||||||    
T  18350790 ttttcgtataagttataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 17258986 - 17258880
Alignment:
Q  6 gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggac 105  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||||||||||  ||||  |||||||| ||| | ||    
T  17258986 gacaaaataaagtcaaactattttcgtacaatcaataagctgttttcataaactatcctgaagagcttatgaaaa--taagctgaaaacagcttatgaac 17258889  T
Q  106 atgtcataa 114  Q
    |||||||||    
T  17258888 atgtcataa 17258880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 32408675 - 32408589
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    ||||||||||| |||||| || ||||||||| ||||||||||||||||||| |||  |||| ||||| ||  |||||||||||||||||    
T  32408675 ttttcatataagctataaactattttcataagctatcctgaagagcttatggaaa--taagcagaaaccaacttacggacatgtcataa 32408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 2569778 - 2569726
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaa 78  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  2569778 ttttcatataatctataagctgttttcataaactatcataaaaagcttatgaa 2569726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 14295476 - 14295540
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 73  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||| ||| |||||||| |||||||    
T  14295476 aaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagctt 14295540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 13604932 - 13604877
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| || ||||||||||||||||  |||| ||||||||||||||||||    
T  13604932 ttttcatataaactttaagctgttttcataagttatcttgaagagcttatgaaaat 13604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 32059689 - 32059642
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 56  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  32059689 aaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 38047955 - 38047888
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    |||| ||||||||| | ||||||||||  ||||| ||||||||||||| |||||||| ||||||||||    
T  38047955 aaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagcttatg 38047888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 3237093 - 3237135
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaat 3237135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 18543292 - 18543226
Alignment:
Q  14 aaagtcaaactt-ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 79  Q
    |||||||||||| |||| ||||||  |||||| ||||||||||| |||||||| |||||||||||||    
T  18543292 aaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttatgaaa 18543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 41957534 - 41957439
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcc 123  Q
    ||||||| |||  |||||||||||||||||| |||||||  ||| ||||||||||  ||||| |||||||  ||| |||||||||||||  |||||||    
T  41957534 ttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaa--taagatgaaaacaacttatggacatgtcataagctgtttcc 41957439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 21768280 - 21768194
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    ||||||||||| || ||||||||||||||||  |||| ||||||||||| |||||  ||||  ||||||||  || |||||||||||||    
T  21768280 ttttcatataaactttaagctgttttcataagttatcttgaagagcttacgaaaa--taagttgaaaacagcgtatggacatgtcataa 21768194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 9202848 - 9202776
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| ||| | ||||||||||| | |||||||||||||||||  |||| |||||| |||||||||||    
T  9202848 aaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaat 9202776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 10272525 - 10272420
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    |||||||| | ||||| ||||| ||||||| ||||||||||| | ||| || |||| |||||||||  ||||  |||||||  |||| ||||||||||||    
T  10272525 aagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaa--taagctgaaaacaacttacagacatgtcataa 10272428  T
Q  115 attgtttc 122  Q
     |||||||    
T  10272427 gttgtttc 10272420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 13193774 - 13193806
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagct 46  Q
    |||||||||||||||||||||||||||||||||    
T  13193774 aaagtcaaacttttttcatataatctataagct 13193806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 16945066 - 16945018
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    |||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  16945066 ttttcatagaagctataagctattttcattaactatcctgaagagctta 16945018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 29201532 - 29201576
Alignment:
Q  38 ctataagctgttttcataaactatcctgaagagcttatgaaaatt 82  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  29201532 ctataagctgttttcataacctatcctggagagcttatggaaatt 29201576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 32172644 - 32172737
Alignment:
Q  30 catataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 125  Q
    ||||||| ||||||||||||||||||| ||||| |||||| || ||| |||  ||||  |||||  | ||| ||||||||||||| ||||||||||    
T  32172644 catataagctataagctgttttcataagctatcatgaagaactaatggaaa--taagctgaaaatggcttatggacatgtcataagttgtttccat 32172737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 12975317 - 12975384
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    |||| ||| ||||| | ||||||||||| ||||||||||| ||||||| ||||| || ||||||||||    
T  12975317 aaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagcttatg 12975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 30217077 - 30217124
Alignment:
Q  34 taatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  30217077 taatctataagctgctttcataagctatcctggagagcttatggaaat 30217124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 8985636 - 8985698
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    ||||||||||| |||||||||||| |  ||||| ||||||||| |||||||  ||||||||||    
T  8985636 aaagtcaaactattttcatataatttgcaagctattttcataagctatcctatagagcttatg 8985698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 28586866 - 28586763
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||| |||||||||||  ||||||||||||| |  | |||||||  |||||||||  |||  ||||  |||||||| ||||||| |||    
T  28586866 aaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaa--taagctgaaaacagcttacggatatg 28586769  T
Q  109 tcataa 114  Q
    ||||||    
T  28586768 tcataa 28586763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 29054896 - 29054950
Alignment:
Q  27 tttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||| ||||||| ||||| ||||||||||| || |||||||||| ||||    
T  29054896 tttcatataagctataagttgtttccataaactatcatgtagagcttatggaaat 29054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 32197720 - 32197762
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||| ||||| |||||||||||| |||||||||||    
T  32197720 tataagctgtttccataagctatcctgaagaacttatgaaaat 32197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 33234337 - 33234403
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||| |||| |||||| ||||||||| ||||| |||  ||| |||||||||||||| ||||    
T  33234337 aagtcaaactgtttttatataagctataagctattttcgtaagttatgctgaagagcttatgtaaat 33234403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 36639528 - 36639595
Alignment:
Q  45 ctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    |||||||||||| ||||| |||||||||||||||||  ||||| |||||||  ||| ||||| |||||||    
T  36639528 ctgttttcataagctatcttgaagagcttatgaaaa--taagaggaaaacaacttatggacacgtcataa 36639595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 18286779 - 18286816
Alignment:
Q  27 tttcatataatctataagctgttttcataaactatcct 64  Q
    |||||||| | |||||||||||||||||||||||||||    
T  18286779 tttcatattagctataagctgttttcataaactatcct 18286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 36181260 - 36181219
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaa 67  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  36181260 ttttcatataaattataatctgttttcataaactatcctgaa 36181219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 41929770 - 41929729
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaa 80  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  41929770 tataagttgttttcataaactatcatgaggagcttatgaaaa 41929729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 2568644 - 2568700
Alignment:
Q  25 tttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| ||||| ||||||| ||||||||||| ||||| || |||||| ||||||||    
T  2568644 tttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaat 2568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 3970780 - 3970708
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||||| ||  |||| ||||||||| |||||  |||||||| |||| ||| |||||||||||||||    
T  3970780 aaaataaagtcaatctgctttcttataatctagaagctaatttcataagctatactggagagcttatgaaaat 3970708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 12425541 - 12425613
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| ||| | ||||| ||||| |||||||||||||||| || ||||| || ||| |||||||||||    
T  12425541 aaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaat 12425613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 36539716 - 36539780
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 73  Q
    |||| |||||||| || ||||||||||| ||||||| |||||| ||||  ||| |||||||||||    
T  36539716 aaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagctt 36539780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 41016149 - 41016221
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||| ||||||| ||||||||||| ||||||| |||||||| || | ||| || | |||||||||||||    
T  41016149 aaaataaattcaaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaat 41016221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 6231912 - 6231802
Alignment:
Q  14 aaagtcaaact-tttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcat 112  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||||  |||  ||||  |||||||||||| |||||||||||    
T  6231912 aaagtcaaactgtttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaa--taagctgaaaacagtttatggacatgtcat 6231815  T
Q  113 aaattgtttccat 125  Q
     | ||||||||||    
T  6231814 tagttgtttccat 6231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 7218174 - 7218102
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| |||||||| ||| |||||||||||    
T  7218174 aaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaat 7218102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 44422678 - 44422741
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||| ||||||||||| ||||||||| |||| |||| |||||||| |||||||||||||||    
T  44422678 tcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaat 44422741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 33527240 - 33527178
Alignment:
Q  16 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaa 78  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||  ||| ||||||||    
T  33527240 agtcaaactgttttcatataatctataagctgttttcataagttatcctcgagatcttatgaa 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 4078242 - 4078177
Alignment:
Q  16 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||| ||  ||||| ||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaat 4078177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 37272686 - 37272625
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 70  Q
    |||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  37272686 aaaataaagtcaatctgttttcatataagctataagctgttttcataaattatcctggagag 37272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 43771885 - 43771921
Alignment:
Q  89 gaaaacagtttacggacatgtcataaattgtttccat 125  Q
    |||||||||||||||||||||||||||||||||||||    
T  43771885 gaaaacagtttacggacatgtcataaattgtttccat 43771921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 30257653 - 30257757
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||| ||| ||||||| || |||| |||||||||||||||||||| || ||||||  |||  ||||  |||||||| ||| | |||||    
T  30257653 aaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaa--taagctgaaaacagcttatgaacatg 30257750  T
Q  109 tcataaa 115  Q
    |||||||    
T  30257751 tcataaa 30257757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 47960715 - 47960660
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 73  Q
    ||||||| ||||||||||| |||||||| ||||||||||  |||||||||||||||    
T  47960715 tcaaactattttcatataagctataagccgttttcataagttatcctgaagagctt 47960660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 48830176 - 48830113
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 72  Q
    |||| ||||||||||| ||||||||||| |||||| |||||||||||| |||| || |||||||    
T  48830176 aaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagct 48830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 4622072 - 4622179
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaatt 117  Q
    ||||||| ||||||||||| ||||||||||||| ||||  ||||| || ||||||| ||||||  ||||   ||||||| ||| |||||||||||||  |    
T  4622072 tcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaa--taagctaaaaacagcttatggacatgtcataagat 4622169  T
Q  118 gtttccatta 127  Q
    ||| ||||||    
T  4622170 gttcccatta 4622179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 25005880 - 25005826
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 80  Q
    ||||||||||| ||||||| ||||||||||| |||||||| ||||||||| ||||    
T  25005880 ttttcatataagctataagttgttttcataagctatcctggagagcttataaaaa 25005826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 27887218 - 27887115
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||  ||| ||||||| ||||||| ||||||||||||||||| || ||||| ||| ||||  ||||   |||||| |||| |||||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaa--taagctaaaaacaatttatggacatg 27887121  T
Q  109 tcataa 114  Q
    ||||||    
T  27887120 tcataa 27887115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 4363724 - 4363671
Alignment:
Q  17 gtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 70  Q
    |||||||| ||||||||||| |||||| || ||||||||| |||||||||||||    
T  4363724 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 4363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 4700143 - 4700094
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| |||||| ||||||| ||||||||||||| |||||||||||||||    
T  4700143 tataagctataaactgtttttataaactatcctggagagcttatgaaaat 4700094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 7137075 - 7137026
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||||||||| ||||| || ||| |||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaat 7137026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 7472304 - 7472353
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||| ||||| ||||| || |||||||||||||||    
T  7472304 tataatctataagctgtttccataagctatcttggagagcttatgaaaat 7472353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 17269220 - 17269285
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    |||| ||||||||| | ||||||||||| | ||||| ||||||||||| |||||||| ||||||||    
T  17269220 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 34290229 - 34290278
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaat 34290278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 10199508 - 10199436
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||||| ||||||| ||||||| ||||||||| ||||  |  |||||||||||||||    
T  10199508 aaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaat 10199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 10581177 - 10581125
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactat 61  Q
    |||| ||||||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  10581177 aaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 10854703 - 10854775
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||||||||  |||  ||||||||||| | |||||||||| ||||||||||| |||||| ||||||    
T  10854703 aaaataaagtcaaactgattttgtataatctatatgttgttttcatatactatcctgaacagcttaagaaaat 10854775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 11695848 - 11695945
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 125  Q
    |||||| |||| ||||||  |||||| ||| ||||| ||| | |||||||||||||  |||  |||||||| ||| |||||||||||||| |||||||||    
T  11695848 ttttcaaataagctataaaatgtttttatagactattctggaaagcttatgaaaat--aagttgaaaacagcttatggacatgtcataaactgtttccat 11695945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 34179972 - 34179900
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | |||| || ||| |||||| ||||||||||||||||||||||| || ||||| ||||    
T  34179972 aaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatggaaat 34179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 4549217 - 4549313
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcca 124  Q
    |||| |||||| |||||||||| ||||| ||||||||| | | |||||||| ||||  |||  |||||||  |||  ||||||||||||||||||||||    
T  4549217 tttttatataagctataagctgctttcacaaactatccaggatagcttatggaaat--aagctgaaaacaacttatagacatgtcataaattgtttcca 4549313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 24913438 - 24913505
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||| || ||||||||||  |||||||||||| |||||||||||||  |||| || ||||||||    
T  24913438 aaagtcaagctattttcatatatgctataagctgttctcataaactatccacaagacctcatgaaaat 24913505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 29723459 - 29723575
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||| ||||||| ||||||||||  ||||||| || ||||| || ||| |||| || | ||||| ||||  |||  |||||||||||| |||||||    
T  29723459 aaaataaactcaaactattttcatatatgctataagttgctttcacaagctaccctgcagtggttatgtaaat--aagttgaaaacagtttatggacatg 29723556  T
Q  109 tcataaattgtttccatta 127  Q
    ||||||  |||||||||||    
T  29723557 tcataagctgtttccatta 29723575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 30259587 - 30259475
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaa-ctatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacat 107  Q
    |||| |||||||||||  ||| |||||| ||||||||||||| |||||| ||||| || |||||||||| |||  ||||  ||||||| ||||  |||||    
T  30259587 aaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaa--taagttgaaaacaatttattgacat 30259490  T
Q  108 gtcataaattgtttc 122  Q
    ||| ||| |||||||    
T  30259489 gtcgtaagttgtttc 30259475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 31517822 - 31517730
Alignment:
Q  27 tttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgttt 121  Q
    |||||||||| ||||||||||| ||||||| || || || ||||||||||||||  ||||  |||||||| ||| | ||||||||| | ||||||    
T  31517822 tttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaa--taagctgaaaacagcttatgaacatgtcatgagttgttt 31517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 35017563 - 35017618
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| ||||||||||| ||||||||||||| || ||||| |||||||||| ||||    
T  35017563 ttttcgtataatctatatgctgttttcataagctgtcctggagagcttatggaaat 35017618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 3924604 - 3924666
Alignment:
Q  19 caaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| ||||| |||||||||| || |||||| |||| ||||||||||||| ||||| ||||    
T  3924604 caaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaat 3924666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 7274034 - 7273968
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 80  Q
    ||||||||| | |||||||| ||  |||||||||||| ||||||||| | |||||||||||| ||||    
T  7274034 aaagtcaaattgttttcatacaagttataagctgtttccataaactaccttgaagagcttattaaaa 7273968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 15361688 - 15361730
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataa 56  Q
    ||||||||| | ||||||||||| |||||||||||||||||||    
T  15361688 aaagtcaaattattttcatataagctataagctgttttcataa 15361730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 25006134 - 25006068
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| ||||| || ||| |||||    
T  25006134 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 4549637 - 4549576
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    ||||| ||||| |||||||| || ||||||| ||||||||||| | |||||| |||||||||    
T  4549637 aaagtaaaactgttttcatacaagctataagatgttttcataagcaatcctggagagcttat 4549576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 6292468 - 6292566
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    ||||||||| | |||||| ||||  |||||||| ||||| ||||||||  || ||||||||||||||  ||||  |||||||| ||| | ||||||||||    
T  6292468 aaagtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaa--taagctgaaaacagcttatgaacatgtcata 6292565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 16322826 - 16322891
Alignment:
Q  16 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||| |||||||| ||  |||||||||||||||||  ||||  ||||||||||||| ||||    
T  16322826 agtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaat 16322891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 25479570 - 25479623
Alignment:
Q  28 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||  ||||||| ||||||||||| |||||||  |||||||||||||||    
T  25479570 ttcatataggctataagttgttttcataagctatcctagagagcttatgaaaat 25479623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 44032099 - 44032026
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatt 82  Q
    |||| ||||||||| | ||||||||||| |||||| || ||||| |||  |||| ||||||||||||| |||||    
T  44032099 aaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaatt 44032026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 5592765 - 5592713
Alignment:
Q  29 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||| ||||||| ||||||||||| |||  || ||||||||||||||||    
T  5592765 tcatataagctataagttgttttcataagctagtcttaagagcttatgaaaat 5592713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 6074449 - 6074509
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    ||||| ||||| ||||||||||| |||| || ||||||| ||| ||| |||||||||||||    
T  6074449 aaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagctta 6074509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 8130411 - 8130459
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatc 62  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||| |||||    
T  8130411 aaagtcaaactgttttcacataagctataagttgttttcataagctatc 8130459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 9656620 - 9656676
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 65  Q
    |||| ||||| ||| | ||||||||||| ||||||||||| ||||||| ||||||||    
T  9656620 aaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctg 9656676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 29007811 - 29007771
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcat 54  Q
    ||||||||||| ||||||||||| ||||||| |||||||||    
T  29007811 aaagtcaaactattttcatataagctataagttgttttcat 29007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 36151605 - 36151496
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||| | ||||| |||||  |||||  ||||||| ||||| |||||   |||||||||||||  ||||  |||||||| ||| |||||||    
T  36151605 aaaataaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatgaaaa--taagttgaaaacaggttatggacatg 36151508  T
Q  109 tcataaattgtt 120  Q
    ||||||| ||||    
T  36151507 tcataaactgtt 36151496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 39348047 - 39347995
Alignment:
Q  29 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| || ||||||| |||||||||||||||||||| | |||||||| ||||    
T  39348047 tcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaat 39347995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 43332486 - 43332526
Alignment:
Q  41 taagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  43332486 taagctgttttcataagctatcttgaagagcttattaaaat 43332526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 24887383 - 24887270
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||| | ||||||||| ||| ||||||||||||||| |||||||| ||||||||||  ||  ||||  |||||||| |||  ||||||    
T  24887383 aaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaa--taagctgaaaacag-ttaatgacatg 24887287  T
Q  109 tcataaattgtttccat 125  Q
    |||||||||||||||||    
T  24887286 tcataaattgtttccat 24887270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 20502157 - 20502066
Alignment:
Q  20 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||  ||||  |||||||  | ||||||||||||||    
T  20502157 aaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaa--taagctgaaaacaaatgacggacatgtcata 20502066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 25453959 - 25453887
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||||| ||||| |||||| || |||||||||||||||||| | |||||||||||||    
T  25453959 aaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaat 25453887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 33405250 - 33405163
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||| |||||| ||| |||||  |||||||||||| | |||| ||||||    
T  33405250 ttttcatataagctataagctgttttcataagctatcttgaagaacttatg-aaagttaagccgaaaacagtttatgaacatatcataa 33405163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 3044342 - 3044248
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttc 122  Q
    |||||||||||||||||| |||||||| ||  ||| |||| ||||||||||||||  ||||  |||||||| ||| | ||||||||||| |||||||    
T  3044342 ttttcatataatctataacctgttttcttatgctaacctggagagcttatgaaaa--taagttgaaaacagcttatgaacatgtcataagttgtttc 3044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 36101538 - 36101610
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||||||||  |||| ||||||||||||| |||||   || |||||||||||||||||||||||||    
T  36101538 aaaataaagtcaaactgatttcgtataatctataagttgtttcattatactatcctgaagagcttatgaaaat 36101610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 52618990 - 52619083
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgttt 121  Q
    |||||||||||  ||||||||||||||| || ||||| |||||||||| ||||||  ||||  ||||| || ||| | ||||||||||||||||||    
T  52618990 ttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaa--taaggtgaaaatagcttatgaacatgtcataaattgttt 52619083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 33965591 - 33965522
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataat--ctataagctgttttcataaactatcctgaagagcttatg 76  Q
    |||| ||||||||||| |||||||||||   ||||||| ||||||||||| ||||| |||||||||||||    
T  33965591 aaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatg 33965522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 2201098 - 2201143
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcat 54  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||    
T  2201098 aaaacaaagtcaaactgttttcatataagctataagctgttttcat 2201143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 20874387 - 20874339
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    ||||||||||| ||||||||||||||||||| ||||||| || ||||||    
T  20874387 ttttcatataaactataagctgttttcataagctatcctaaatagctta 20874339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 43875624 - 43875684
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||||||||| || |||||||| ||||||| ||||||||||| ||||| || |||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 47904146 - 47904098
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    |||||||||||||||||||  |||||||||| ||||| |||||||||||    
T  47904146 ttttcatataatctataagtggttttcataagctatcgtgaagagctta 47904098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 43115048 - 43115140
Alignment:
Q  31 atataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 125  Q
    |||||| ||||||| ||||||||| ||||||| |  |||||||||| ||||  |||  |||||||  ||| ||||||||||||| ||||||||||    
T  43115048 atataagctataagttgttttcatgaactatcattgagagcttatggaaat--aagctgaaaacaagttatggacatgtcataagttgtttccat 43115140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 1217883 - 1217788
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcc 123  Q
    ||||||| |||  |||||||||||||||||| |||||||  ||| |||||||||   ||||| |||||||  ||| |||||||||||||  |||||||    
T  1217883 ttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaa--gtaagatgaaaacaacttatggacatgtcataagctgtttcc 1217788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 20192706 - 20192664
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgtttt 51  Q
    |||| ||||||||||  ||||||||||||||||||||||||||    
T  20192706 aaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 27290989 - 27290898
Alignment:
Q  21 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    |||||||||||||||||||| ||||||||| ||| | |||||||| |||| | ||| |||  ||||  |||||||| ||| || ||||||||||    
T  27290989 aacttttttcatataatctaaaagctgtttgcattagctatcctgcagagttcatggaaa--taagctgaaaacagcttatgggcatgtcataa 27290898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 27792850 - 27792908
Alignment:
Q  17 gtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||||||| ||||||||||| ||  ||| ||||||||||||||||| || |||||||||    
T  27792850 gtcaaactattttcatataagctgcaagttgttttcataaactatcatgtagagcttat 27792908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 38462251 - 38462305
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcc 63  Q
    |||| ||||||||||| ||||||||||  |||||| |||||||||||| ||||||    
T  38462251 aaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatcc 38462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 19679428 - 19679375
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 62  Q
    |||| ||||||||||| ||||| ||||| ||||||| |||||| ||||||||||    
T  19679428 aaaataaagtcaaactgttttcttataagctataagttgtttttataaactatc 19679375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 22203423 - 22203472
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||| ||||||||||| ||||| || ||| |||||||||||    
T  22203423 tataatctataagttgttttcataagctatcttggagaacttatgaaaat 22203472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 22343589 - 22343650
Alignment:
Q  20 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| |||||||||||  |||||||||||| ||||| |||| |||||||| ||||| ||||    
T  22343589 aaactgttttcatataagttataagctgtttccataagctatactgaagagattatgcaaat 22343650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 24158572 - 24158531
Alignment:
Q  40 ataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||| |||||||| |||||||||| ||||    
T  24158572 ataagctgttttcataagctatcctggagagcttatggaaat 24158531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 28306128 - 28306193
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    |||| ||||||||||| |||||||||||  || ||| ||||||||||| |||| | ||||||||||    
T  28306128 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 28306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 1816553 - 1816625
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||||  |||||  |||||| ||||||||||| |||| ||| ||||||||| |||||    
T  1816553 aaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaat 1816625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 2071058 - 2071098
Alignment:
Q  41 taagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  2071058 taagctgttttcataagctatgatgaagagcttatgaaaat 2071098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 2197806 - 2197878
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||| ||||||| ||||||||||| | ||||||| |||||||||  | || || |||||||||||||||    
T  2197806 aaaataaaatcaaactattttcatataagcaataagctattttcataacttgtcttggagagcttatgaaaat 2197878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 19679855 - 19679807
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatc 62  Q
    ||||||| ||| ||||||||||| ||||| | |||||||||||||||||    
T  19679855 aaagtcatactgttttcatataagctataggttgttttcataaactatc 19679807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 21367637 - 21367709
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| ||| | ||||| |||||| |||||| ||||||||||| ||||| || ||| |||||||||||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaat 21367709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 21872363 - 21872315
Alignment:
Q  17 gtcaaacttttttcatataatctataagctgttttcataaactatcctg 65  Q
    |||||| |||||| |||||| ||||||| ||||||||||| ||||||||    
T  21872363 gtcaaatttttttgatataagctataagttgttttcataagctatcctg 21872315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 22232796 - 22232868
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| |||||||||||    |||||| ||||||||| ||||| || || ||||||||||||    
T  22232796 aaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatcatgtagggcttatgaaaat 22232868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 23315596 - 23315668
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | ||||||||||  ||||||| ||||| ||||| |||| || ||||||||||| ||||    
T  23315596 aaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaat 23315668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 24785175 - 24785247
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||||| || ||||  ||||||||||||  ||||||||||| |||||||  |||||||||| ||||    
T  24785175 aaaataaagtcaatctgtttttgtataatctataacgtgttttcataagctatcctcgagagcttatgtaaat 24785247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 32064410 - 32064481
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | |||| ||| || ||||| | ||| ||||||||||||||| ||||||||||||||||    
T  32064410 aaaataaagtcaaattatttttataaaa-ctatatgttgtgttcataaactatcctaaagagcttatgaaaat 32064481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 36139848 - 36139920
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||||||||  |||| ||||| ||||||| |||||   || |||||| ||||||||||||||||||    
T  36139848 aaaataaagtcaaactgatttcgtataagctataagttgtttcattatactatcttgaagagcttatgaaaat 36139920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 42753575 - 42753631
Alignment:
Q  8 caaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcct 64  Q
    ||||| |||||||||| |||||||||||| ||||||| |||||| | || |||||||    
T  42753575 caaaacaaagtcaaacatttttcatataagctataagttgtttttacaagctatcct 42753631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 52440745 - 52440689
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatt 82  Q
    |||||| |||| ||||||||| |||||||||  |||| |||||| ||||||||||||    
T  52440745 ttttcaaataagctataagctattttcataatttatcttgaagaacttatgaaaatt 52440689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 33256710 - 33256813
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||||| | |||||||||| | ||||||||  ||||  || ||||||||| | |||||    
T  33256710 aaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaa--taagctgagaacagtttatgaacatg 33256807  T
Q  109 tcataa 114  Q
    ||||||    
T  33256808 tcataa 33256813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 43141846 - 43141953
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    ||||||||| | ||| ||||||| ||||||| ||||||||||| ||||||||||||| ||||| |||  ||| | |||||||  ||| || |||||||||    
T  43141846 aaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaa--taaaatgaaaacaacttatgggcatgtcata 43141943  T
Q  114 aattgtttcc 123  Q
    | ||||||||    
T  43141944 agttgtttcc 43141953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 43205284 - 43205393
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    |||| |||||| |||||||||||  ||||| |||||||||||| |||||  | |||||||||| |||  ||||  ||||||||||| ||||||||| |||    
T  43205284 aaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaa--taagttgaaaacagtttgcggacatgttata 43205381  T
Q  114 aattgtttccat 125  Q
      ||||||||||    
T  43205382 tgttgtttccat 43205393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 9395117 - 9395172
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||||||||||||| |  ||| ||| |||||||||||||||    
T  9395117 ttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaat 9395172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 15377752 - 15377807
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||  |||||||||||||||||| |||| |||| ||||||||||||||    
T  15377752 ttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaat 15377807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 28803606 - 28803539
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    |||| |||||||||||  |||||||||| ||| ||| ||||||| |||||||||||| ||||||||||    
T  28803606 aaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagcttatg 28803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 39983329 - 39983384
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaat 39983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 4026817 - 4026859
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  4026817 tataagctgttttcataaattatcctgaagaacttatgaaaat 4026859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 13736387 - 13736321
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||| |||||| || | ||||||||||||||||||| |||| ||  |||||||||||||||    
T  13736387 aagtcaaactattttcacatcagctataagctgttttcataagctatactagagagcttatgaaaat 13736321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 44644278 - 44644320
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  44644278 tataagctgttttcaaaaactatcttgaagagcttatgaaaat 44644320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 6561340 - 6561397
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    ||||||||||||||||||| |||||||  ||||||| || |||||||| |||||||||    
T  6561340 tcaaacttttttcatataacctataagaagttttcagaagctatcctggagagcttat 6561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 10884594 - 10884549
Alignment:
Q  36 atctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||    
T  10884594 atctataagctgttttcataagctatcctagagagcttatgaaaat 10884549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 15780064 - 15780113
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    ||||||||||||||||||| ||||||||||| ||||| || |||||||||    
T  15780064 ttttcatataatctataagttgttttcataagctatcgtgcagagcttat 15780113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 3235483 - 3235412
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||| |||| || ||||| ||||    
T  3235483 aaaataaagtcaaactgttt-catataaactataagctgttttcatatactatcttgaaaagtttatggaaat 3235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 13866865 - 13866917
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 67  Q
    |||||||||| |||| |||||||||||||||| ||||||| | ||||||||||    
T  13866865 aagtcaaactgtttttatataatctataagctcttttcattagctatcctgaa 13866917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 17952801 - 17952745
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 65  Q
    |||| ||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  17952801 aaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctg 17952745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 22681285 - 22681213
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||| |||| | ||||||||||| ||||||||||||||||||| |||||||  ||| |||||| ||||    
T  22681285 aaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaat 22681213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 1742126 - 1742018
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    |||||||||| |||  ||||||  |||||||||||||||||| ||||| ||||||| ||||| |||  ||||  ||| | || ||| | |||||||||||    
T  1742126 aagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaa--taagttgaagatagcttatgcacatgtcataa 1742029  T
Q  115 attgtttccat 125  Q
     ||||||||||    
T  1742028 gttgtttccat 1742018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 3102663 - 3102710
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 56  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||||    
T  3102663 aaaataaagtcaaactatttttatataatctattagctgttttcataa 3102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 13630376 - 13630313
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatga 77  Q
    ||||||||||| ||||||||||||| ||||| ||||||| ||| |||||||  |||| ||||||    
T  13630376 aaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgagagtttatga 13630313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 16353837 - 16353903
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||| |||||||| |||||||||||||| |||| ||||| || ||| ||| |||||||    
T  16353837 aaagtcaaactttt-tcatataagctataagctgtttttataagctatcttggagatcttgtgaaaat 16353903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 18066115 - 18066170
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||    
T  18066115 ttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaat 18066170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 18179323 - 18179268
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||| |||| ||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctggagaacttacgaaaat 18179268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 25800816 - 25800859
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaaga 69  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  25800816 ttttcatataagctataagctgttttcataagctatcttgaaga 25800859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 33942120 - 33942228
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||| ||||||| ||| ||||||| ||||||||||| | ||| |  |||||| |||||||||  ||  |||||||| ||| | |||||    
T  33942120 aaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaatt--agctgaaaacagcttatgaacatg 33942217  T
Q  109 tcataaattgt 119  Q
    |||||| ||||    
T  33942218 tcataagttgt 33942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 35486458 - 35486391
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||  |||||||||||||||||||||  || |||||||| |||| ||||| ||||    
T  35486458 aaagtcaaactgtttttgtataatctataagctgttttcgcaagctatcctggagaggttatggaaat 35486391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 43985086 - 43985031
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| |||||  |||||| ||||||||||| ||||| ||||||||||||||||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaat 43985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 3049974 - 3050016
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||||||| ||||| || |||||||||||||||    
T  3049974 tataagctgttttcataagctatcatggagagcttatgaaaat 3050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 5043660 - 5043590
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 79  Q
    |||| ||||||||||| ||||||||||| ||| ||| ||||||||||| ||||| || | |||| ||||||    
T  5043660 aaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatggatagctaatgaaa 5043590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 25790102 - 25790168
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||| ||||||||||| ||| ||  |||||  |||| |||||||| |||||||||||||||    
T  25790102 aagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaat 25790168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 36415779 - 36415701
Alignment:
Q  3 attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| |||| |||||||||| ||||||||  |  ||||||||||||||||||| ||||| || ||| |||| ||||||    
T  36415779 attgataaaataaagtcaaacatttttcattgatgctataagctgttttcataagctatcatgtagaacttacgaaaat 36415701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 41817148 - 41817210
Alignment:
Q  19 caaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| ||||  |||||| | |||||| |||||||||||||||||| |||||||||| ||||    
T  41817148 caaactatttttgtataatgtgtaagctattttcataaactatcctggagagcttatggaaat 41817210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 1939432 - 1939323
Alignment:
Q  9 aaaagaaagtcaaacttttttcatata-atctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacat 107  Q
    |||| ||||| ||||| |||||||||  | |||||| |||||||||||| |||| ||| |||||||||| |||  ||||  |||||||| ||| ||||||    
T  1939432 aaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaa--taagttgaaaacagcttatggacat 1939336  T
Q  108 gtcataaattgtt 120  Q
    ||||||| |||||    
T  1939335 gtcataagttgtt 1939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 11513868 - 11513921
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 62  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| |||||    
T  11513868 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 42419990 - 42420039
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||| ||||||||| |||||||| | |||||||| ||||    
T  42419990 tataatctataagctattttcataagctatcctggatagcttatggaaat 42420039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 42817470 - 42817409
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    ||||||| || |||||||||||   |||| |||||||||||| |||| ||||||||||||||    
T  42817470 aagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatg 42817409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 8017404 - 8017476
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| ||| | ||||||||||| || ||| |||||||||||| ||||| || ||| |||||||||||    
T  8017404 aaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaat 8017476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 9556209 - 9556281
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||  | |||||||| || |||||| |||||||||||| |||||||  | |||||||||||||    
T  9556209 aaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaagcttatgaaaat 9556281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 11344792 - 11344756
Alignment:
Q  89 gaaaacagtttacggacatgtcataaattgtttccat 125  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  11344792 gaaaacagtttatggacatgtcataagttgtttccat 11344756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 13869195 - 13869123
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| | ||||| | ||||||| ||| |||||||||||||||||||  ||||||| ||| || ||||||||    
T  13869195 aaaagacattcaaattattttcatctaagctataagctgttttcataagttatcctggagaactaatgaaaat 13869123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 26626847 - 26626915
Alignment:
Q  13 gaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| ||| | ||||| ||||| ||| ||||||||||||||| ||||| || ||| |||||||||||    
T  26626847 gaaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaat 26626915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 30552732 - 30552672
Alignment:
Q  21 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||| | ||||||  | |||||||||||||||||  |||||||||| ||||    
T  30552732 aacttttttcatatcagctataaattattttcataaactatcctagagagcttatggaaat 30552672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 35485887 - 35485959
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| |||   ||||| ||||||| |||||| |||| |||||||||||||| |||| ||||    
T  35485887 aaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaat 35485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 36863725 - 36863653
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||  |||| ||||||  |||||  ||||||||||| ||||| || |||||||||||||||    
T  36863725 aaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaat 36863653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 37276722 - 37276778
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 71  Q
    |||||||||| |||||||||||  |||||| |||||||||||  ||||||| |||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctggagagc 37276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 37292447 - 37292379
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatga 77  Q
    |||| ||||| ||||| ||||||||||| |||| || ||||||| ||| |||||||| |||| ||||||    
T  37292447 aaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttatga 37292379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 39621923 - 39621968
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 56  Q
    |||| |||||||||||||||   |||||||||||||||||||||||||    
T  39621923 aaaataaagtcaaactttttg--tataatctataagctgttttcataa 39621968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 3528779 - 3528883
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    ||||||||||||| ||||||||  ||||  | |||||||| ||||||| || ||||||||||||||  ||||| |||||||  ||| |||||||||||||    
T  3528779 aagtcaaacttttctcatataaattatagaccgttttcatgaactatcttggagagcttatgaaaa--taagatgaaaacaagttatggacatgtcataa 3528876  T
Q  115 attgttt 121  Q
     ||||||    
T  3528877 gttgttt 3528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 4246397 - 4246493
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttcca 124  Q
    ||||||||||||||||||||||||||||||| ||||  || ||||| ||| ||||  ||||  |||||||| ||| ||||||||||| | |||||||||    
T  4246397 ttttcatataatctataagctgttttcataagctattatggagagcatataaaaa--taagttgaaaacagcttatggacatgtcatgagttgtttcca 4246493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 2117373 - 2117439
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||  ||||||  |||||||||    
T  2117373 aaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttat 2117439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 1497951 - 1498023
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||||||||| |  ||||||  |||||||||||||||| || |||||||||||||||    
T  1497951 aaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatcttggagagcttatgaaaat 1498023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 7006402 - 7006346
Alignment:
Q  177 acctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttg 233  Q
    |||||||| ||||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  7006402 acctgcatacagttcactcttccaccattgcttgtgatggaggtaatgtcattgttg 7006346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 7009483 - 7009427
Alignment:
Q  177 acctgcatgcagtttactcttccgccattgcttgtaatggaggtaatgtctttgttg 233  Q
    |||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||||    
T  7009483 acctgcatacagttcactcttccaccattgcttgcaatggaggtaatgtcattgttg 7009427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 31671174 - 31671102
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| ||| | ||||||||||| ||||||||||||||| |||||||||||  | |||||||||||||    
T  31671174 aaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaat 31671102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 10616635 - 10616527
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    |||||||| |||||||||||||  ||||||| ||||| |||| ||||  || ||||||||| ||||  ||||  ||| |||  |||||||||||||||||    
T  10616635 aagtcaaagttttttcatataaaatataagccgttttaataagctattttggagagcttataaaaa--taagctgaacacaacttacggacatgtcataa 10616538  T
Q  115 attgtttccat 125  Q
     ||||||||||    
T  10616537 gttgtttccat 10616527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 33911361 - 33911310
Alignment:
Q  30 catataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||| ||||||||||||||||||||||||||||| || || |||||||    
T  33911361 catataatttataagctgttttcataaactatcctgaaaagtttgtgaaaat 33911310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 29837145 - 29837111
Alignment:
Q  48 ttttcataaactatcctgaagagcttatgaaaatt 82  Q
    |||||||||||||||||||||||||||||||||||    
T  29837145 ttttcataaactatcctgaagagcttatgaaaatt 29837111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 281948 - 281832
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||  | ||||||||||| ||||||||||| ||||||| |||||||  |||||| ||| |||  ||||  |||||||  |||  ||||||    
T  281948 aaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaa--taagctgaaaacaacttatagacatg 281851  T
Q  109 tcataaattgtttccatta 127  Q
    |||||| ||| ||||||||    
T  281850 tcataagttgcttccatta 281832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 1275136 - 1275191
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||||||||||||||||   ||||||| |||||||||| ||||    
T  1275136 ttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaat 1275191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 2027506 - 2027459
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 56  Q
    |||| ||||||||||| ||||||||||| |||||||||||| ||||||    
T  2027506 aaaataaagtcaaactattttcatataacctataagctgttctcataa 2027459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 3155146 - 3155209
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 72  Q
    |||| ||||||||||| ||| ||||||| ||||||||| |||||||||  ||||||| ||||||    
T  3155146 aaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagct 3155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 13907822 - 13907889
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||  || ||||| |||| |||||||| || ||||| ||||||||||||||||||    
T  13907822 aaagtcaaactgtttttgtaaaatctgtaagttgttttcaaaagctatcttgaagagcttatgaaaat 13907889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 18264304 - 18264371
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||| | |||||||| ||  |||||||| ||||| ||||||||||||||||| ||||| ||||    
T  18264304 aaagtcaaattgttttcatacaagttataagctattttcttaaactatcctgaagaggttatggaaat 18264371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 7149553 - 7149507
Alignment:
Q  29 tcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||||||| |||||| || |||||||||||||||||| |||||||||    
T  7149553 tcatataagctataaactattttcataaactatcctggagagcttat 7149507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 10860958 - 10861000
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaag 68  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||    
T  10860958 ttttcgtataatctataagctattttcataagctatcctgaag 10861000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 27894017 - 27894119
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||| | |||| |||||| |||| || |||||||||||  |||| |||| ||||||||||||  ||||  |||||||||||| ||||||     
T  27894017 aaaataaagtcaaattgttttaatataaactattag-tgttttcataagatatcttgaaaagcttatgaaaa--taagctgaaaacagtttatggacata 27894113  T
Q  109 tcataa 114  Q
    ||||||    
T  27894114 tcataa 27894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 725755 - 725645
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||| |||| |||||| ||||| | ||||||  ||| |||| |  ||||||||||| ||||  |||  ||||| ||| ||||||||||    
T  725755 aaaaaaaagtcaaactgtttttatataaactatatgttgtttttgtaacctattcgaaagagcttatggaaat--aagctgaaaatagtctacggacatg 725658  T
Q  109 tcataaattgttt 121  Q
    |||||| ||||||    
T  725657 tcataagttgttt 725645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 2167989 - 2168058
Alignment:
Q  11 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 80  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2167989 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2168058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 2179622 - 2179691
Alignment:
Q  11 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 80  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2179622 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2179691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 2735062 - 2735111
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||||||||| | ||| |||| | |||||||||||    
T  2735062 tataatctataagctgttttcataagcaatcttgaacaacttatgaaaat 2735111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 5550107 - 5550148
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcata 55  Q
    ||||||||| | ||||||||||| ||||||||||||||||||    
T  5550107 aaagtcaaattgttttcatataagctataagctgttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 24838826 - 24838777
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    ||||||||||| |||||||||| |||||||| ||||| || |||||||||    
T  24838826 ttttcatataagctataagctgatttcataagctatcatggagagcttat 24838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 31324437 - 31324498
Alignment:
Q  20 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||| ||||||| ||| ||||||||||  ||||||| ||||| |||||||||||| |||||    
T  31324437 aaactattttcatgtaagctataagctgcattcataagctatcatgaagagcttattaaaat 31324498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 1401102 - 1401146
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    ||||| ||||||||||||||||||| ||||| || ||||||||||    
T  1401102 tataagctataagctgttttcataagctatcatggagagcttatg 1401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 4006684 - 4006756
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | |||| |||||| ||||||| ||||||||||| ||||||   |||| ||||||||||    
T  4006684 aaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatgaaaat 4006756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 10400239 - 10400311
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | || |||||||| ||||||| ||| |||||||  |||||||  ||||||||||||||    
T  10400239 aaaataaagtcaaattgttatcatataagctataagatgtcttcataagatatcctggtgagcttatgaaaat 10400311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 13907409 - 13907457
Alignment:
Q  30 catataatctataagctgttttcataaactatcctgaagagcttatgaa 78  Q
    |||||||| | |||| ||||||||||| ||||||| |||||||||||||    
T  13907409 catataatttgtaagttgttttcataagctatcctaaagagcttatgaa 13907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 33787845 - 33787773
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| |  ||||||||||  ||||||||||||||||||  |||| || |||||||||| ||||    
T  33787845 aaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaat 33787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 33887800 - 33887872
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||| ||||||| ||||  ||||||| |||| |||||||||||| ||||||||||  ||||||| ||||    
T  33887800 aaaacaaactcaaactgttttagtataatcaataaactgttttcataagctatcctgaaatgcttatggaaat 33887872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 21157743 - 21157810
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||||| ||| ||||||| ||||||||||  ||||||||||||||||||| ||||    
T  21157743 aaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaat 21157810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 49219109 - 49219181
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||||||||| | ||||| ||||| ||||    
T  49219109 aaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaat 49219181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 23819066 - 23819162
Alignment:
Q  16 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    ||||||||| |||||||||||  |||||  ||||||||||| ||||| ||||||||||||  |||  ||||| |||||||  ||| |||||||||||||    
T  23819066 agtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaa--taagatgaaaacaacttatggacatgtcataa 23819162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 17883584 - 17883546
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataa 56  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  17883584 tcaaacttttttcgtataatctataagctgttttcataa 17883546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 47800623 - 47800665
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaat 47800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 56480348 - 56480390
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  56480348 tataagctgttttcataaactatcttggagagcttatgaaaat 56480390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 12650355 - 12650311
Alignment:
Q  38 ctataagctgttttcataaactatcctgaagagcttatgaaaatt 82  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  12650355 ctataagctgttttcataacctatcctggagagcttatggaaatt 12650311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 36722757 - 36722697
Alignment:
Q  21 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||||||||  |||||| |||||| ||||  |||||||||||||||||||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaat 36722697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 1706621 - 1706664
Alignment:
Q  38 ctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||||||||| || | |||||||||||||    
T  1706621 ctataagctgttttcataaactatcttggacagcttatgaaaat 1706664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 10365753 - 10365788
Alignment:
Q  20 aaacttttttcatataatctataagctgttttcata 55  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10365753 aaacttttttcatataaactataagctgttttcata 10365788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 29778782 - 29778837
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| || |||| ||||||||||| ||| | ||||||||||||||||||    
T  29778782 ttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaat 29778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 35507402 - 35507355
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaa 79  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  35507402 tataagctataagttgttttcatacactatcctaaagagcttatgaaa 35507355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 35507534 - 35507487
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaagagcttatgaaa 79  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  35507534 tataagctataagttgttttcatacactatcctaaagagcttatgaaa 35507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 53315305 - 53315368
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||| ||||||||||| |||||||||||| ||| |||| | |||  |||||||||||||||    
T  53315305 tcaaactattttcatataagctataagctgttctcaaaaacaaacctagagagcttatgaaaat 53315368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 54325137 - 54325070
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    |||| ||||||||||| ||||||||||| ||||||||| |||||| || ||||| || |||| |||||    
T  54325137 aaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatg 54325070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 2996550 - 2996653
Alignment:
Q  16 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaa 115  Q
    ||||||| | |||| ||||||  |||||| ||||||||||| ||||| || ||||| ||||||||  ||||  ||||| || ||| |||||||||||||     
T  2996550 agtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaa--taagttgaaaaaagcttatggacatgtcataag 2996647  T
Q  116 ttgttt 121  Q
    ||||||    
T  2996648 ttgttt 2996653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 7694104 - 7694038
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||| ||||  ||||| |||||||||||||||||||  ||||||| |||| ||||| ||||    
T  7694104 aagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaat 7694038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 25309233 - 25309283
Alignment:
Q  31 atataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| ||| || |||||||| |||||||||||| |||||||||||||||    
T  25309233 atataaactacaaactgttttcgtaaactatcctgcagagcttatgaaaat 25309283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 35958625 - 35958691
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||| ||||||||| || ||| |||||| ||| ||||||||||||||| |||||||| |||| ||||    
T  35958625 aaaataaagtcaaatttgttttatataagctagaagctgttttcataagctatcctggagagtttat 35958691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 42866047 - 42866105
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    ||||||| |||| |||||| ||||||| ||||||||||| |||||||  ||||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatccttgagagcttatg 42866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 3155606 - 3155664
Alignment:
Q  42 aagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacg 102  Q
    ||||||||||||||||||||| |||||| || |||||||  ||||  ||||||||||||||    
T  3155606 aagctgttttcataaactatcttgaagaactaatgaaaa--taagctgaaaacagtttacg 3155664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 24929463 - 24929577
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| |||||| |||| |||||||| || ||||||| |||||||||||||| | ||  |||||||||| |||  ||||  ||||||| |||| | |||||    
T  24929463 aaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaa--taagctgaaaacaatttatgaacatg 24929560  T
Q  109 tcataaattgtttccat 125  Q
     |||||  |||||||||    
T  24929561 ccataagctgtttccat 24929577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 40008546 - 40008579
Alignment:
Q  48 ttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||||||||||||||||||| |||||    
T  40008546 ttttcataaactatcctgaagagcttataaaaat 40008579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 41097337 - 41097296
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataa 56  Q
    |||||||||| ||||||||| | |||||||||||||||||||    
T  41097337 aagtcaaactgttttcatattacctataagctgttttcataa 41097296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 44319919 - 44319992
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatt 82  Q
    |||| |||||| |||| ||||||||||| ||| ||||| |||| |||| |||||||  ||| ||||||||||||    
T  44319919 aaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcctagagaacttatgaaaatt 44319992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 1137706 - 1137754
Alignment:
Q  33 ataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||| |||||||||||||||   |||||||||| ||||    
T  1137706 ataatctataagctgctttcataaactatccaagagagcttatggaaat 1137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 3175921 - 3175985
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 73  Q
    |||| ||||||||| | ||||||  |||  |||||||||||||||||| ||||||||||| ||||    
T  3175921 aaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatcctgaagggctt 3175985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 11264301 - 11264374
Alignment:
Q  39 tataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    |||||| ||||||||||| | |||||  |||||||||| ||||  |||  |||||||||||| |||||||||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaat--aagttgaaaacagtttatggacatgtcataa 11264374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 16200081 - 16200009
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||| ||||||| ||||  ||||  ||||||||||||||||||| ||||| || ||  |||||||||||    
T  16200081 aaaagaaaatcaaactgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaat 16200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 21043299 - 21043263
Alignment:
Q  45 ctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||| |||||||||||||| |||||||||    
T  21043299 ctgttttcataagctatcctgaagagcatatgaaaat 21043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 30207662 - 30207569
Alignment:
Q  18 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    ||||||| ||||||||||| ||||||| ||||||||||| ||| | |  |||| ||||| |||  ||||  |||||||| |||| |||||||||||    
T  30207662 tcaaactgttttcatataagctataagttgttttcataagctaccttagagagattatggaaa--taagctgaaaacagcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 10075646 - 10075579
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| |||| ||||||  |||||||| ||||||||| |||||||  |||||||||||||||    
T  10075646 aaagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaat 10075579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 39389271 - 39389204
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||||||| |||||||||  |||| |||| ||| |||||| ||||| |||||||||||||||||    
T  39389271 aaagtcaaacttctttcatataggctatcagctatttccataaattatccagaagagcttatgaaaat 39389204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 6509403 - 6509337
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 75  Q
    |||| ||||||||| | | || |||||| ||||||||||||||||||| |||||||| |||||||||    
T  6509403 aaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttat 6509337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 30013194 - 30013244
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctg 65  Q
    |||||||||| ||| ||||||| ||||||||||||||||||| ||||||||    
T  30013194 aagtcaaactgtttccatataagctataagctgttttcataagctatcctg 30013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 11795067 - 11795165
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 113  Q
    ||||||| ||| |||||||||||  ||||||||| |||||||| ||||  || |||||||||| |||  ||||  |||||||| ||| ||||||||||||    
T  11795067 aaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaa--taagctgaaaacaggttatggacatgtcata 11795164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 41620391 - 41620277
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||| | | |||||||| |||| |||||||||| |||| ||||| ||  |||||| |||||||  |||  |||||||  ||| |||||||    
T  41620391 aaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctatcttgtcgagcttttgaaaat--aagcggaaaacaacttatggacatg 41620294  T
Q  109 tcataaattgtttccat 125  Q
    |||||| ||||||||||    
T  41620293 tcataatttgtttccat 41620277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 1470956 - 1470884
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| |  |||||||||| ||||||||||||||||||| ||||| |||| || ||| ||||||    
T  1470956 aaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaaaagtttaggaaaat 1470884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 12361168 - 12361265
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 114  Q
    |||||||| | ||||||||||| |||||||||||||||||||  ||| | | |||||| ||| |||  ||||  |||||||| ||| |||||||||||||    
T  12361168 aagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaa--taagttgaaaacagcttatggacatgtcataa 12361265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 25097387 - 25097427
Alignment:
Q  40 ataagctgttttcataaactatcctgaagagcttatgaaaa 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  25097387 ataagctgttttcataagctatcctggagagcttatgaaaa 25097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 29973051 - 29973123
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| |||||| |||| ||||||| ||||||||||| |||||||  |||| ||||| ||||    
T  29973051 aaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaat 29973123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 42215406 - 42215334
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||||| ||||  |||||||||||| || ||||||||  |||||||| |||||||||| ||||    
T  42215406 aaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaat 42215334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 43704473 - 43704365
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcata--aactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtca 111  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||  |  |||||| || |||||||| |||  ||||   ||||||||||| | ||||||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataagagttatcctcaaaagcttatggaaa--taagcttaaaacagtttatgaacatgtca 43704376  T
Q  112 taaattgtttc 122  Q
    ||| |||||||    
T  43704375 taagttgtttc 43704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 4763888 - 4763955
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 76  Q
    |||| ||| ||||||  |||||| |||| ||||||||||||||  ||| |||||||||||||||||||    
T  4763888 aaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaagagcttatg 4763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 5227522 - 5227577
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||| ||||||||||||||  ||| ||||| ||||||||||||||||||    
T  5227522 ttttaatataagctataagctgtttttgtaagctatcatgaagagcttatgaaaat 5227577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 9836949 - 9836882
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| |||||||||||  || || |||||||||||| ||||| || |||||||||| ||||    
T  9836949 aaagtcaaactattttcatataagttacaacctgttttcataagctatcttggagagcttatggaaat 9836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 27028830 - 27028873
Alignment:
Q  38 ctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaat 27028873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 31862468 - 31862535
Alignment:
Q  14 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| || || ||||| ||||||| |||||||||||  ||||||  |||||||||||||||    
T  31862468 aaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaat 31862535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 31875669 - 31875581
Alignment:
Q  35 aatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 125  Q
    ||||||||||||||||   ||||||||| | |||||||||||||||  ||||  |||||  | ||| ||||||||||||| ||||||||||    
T  31875669 aatctataagctgtttctttaaactatcttcaagagcttatgaaaa--taagttgaaaatggcttatggacatgtcataagttgtttccat 31875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 38537584 - 38537619
Alignment:
Q  32 tataatctataagctgttttcataaactatcctgaa 67  Q
    |||||||||||||||| |||||||||||||||||||    
T  38537584 tataatctataagctgctttcataaactatcctgaa 38537619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 41309772 - 41309827
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||||||| ||||||| | ||||||||| |||||||||| || ||||||||||    
T  41309772 ttttcatataaactataagatattttcataagctatcctgaaaagtttatgaaaat 41309827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 28769433 - 28769387
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactat 61  Q
    |||||||||| ||||| ||||| ||||||||||||||||||| ||||    
T  28769433 aagtcaaactattttcttataagctataagctgttttcataagctat 28769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 39551290 - 39551195
Alignment:
Q  28 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccat 125  Q
    |||||| || ||||||| ||||||||||| || ||||| ||||||||| ||||  ||||   ||||||| ||  ||||||||||||| ||||||||||    
T  39551290 ttcatacaagctataagttgttttcataagctttcctggagagcttataaaaa--taagttaaaaacagcttttggacatgtcataagttgtttccat 39551195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 42764248 - 42764302
Alignment:
Q  20 aaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    ||||| |||||||| || ||||||||| |||||||||  ||||||||||||||||    
T  42764248 aaactgttttcatacaagctataagctattttcataagttatcctgaagagctta 42764302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 1433525 - 1433590
Alignment:
Q  16 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||| |||| || ||| || ||||| |||||||||| |||||||| |||||||||||||||    
T  1433525 agtcgaactatttttatttaagctttaagcagttttcataagctatcctggagagcttatgaaaat 1433590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 9562344 - 9562291
Alignment:
Q  28 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    ||||||| | ||||||| | |||||||||||||||||||| |||| ||||||||    
T  9562344 ttcatatcaactataagatattttcataaactatcctgaaaagctcatgaaaat 9562291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 11183515 - 11183625
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 108  Q
    |||| ||||||||||| |  |||||| | |||||||||||||||| || ||| |||| |||||||||| |||  ||||  |||||||| |||  |||||     
T  11183515 aaaacaaagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaa--taagctgaaaacagcttatagacata 11183612  T
Q  109 tcataaattgttt 121  Q
    |||||| ||||||    
T  11183613 tcataagttgttt 11183625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 40014960 - 40014919
Alignment:
Q  38 ctataagctgttttcataaactatcctgaagagcttatgaaa 79  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  40014960 ctataagatgttttcataagctatcttgaagagcttatgaaa 40014919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 1470029 - 1470061
Alignment:
Q  49 tttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||||| ||||||||||||||||||||||||    
T  1470029 tttcataatctatcctgaagagcttatgaaaat 1470061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 4390180 - 4390248
Alignment:
Q  6 gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 74  Q
    ||||||| | ||||||||| ||||   |||||||||||||| ||||||||| || ||| ||||||||||    
T  4390180 gacaaaacacagtcaaactgtttttgcataatctataagctattttcataagctctccagaagagctta 4390248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 4558768 - 4558840
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||| ||| | ||||||||||  ||||||||||||| ||||| |||||||  |||||||||| ||||    
T  4558768 aaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaat 4558840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 8062494 - 8062566
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||||||||| | ||||||||||| ||||||| |||| |||||| ||||| |  |||| ||||||||||    
T  8062494 aaaaaaaagtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaat 8062566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 10383855 - 10383927
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| ||| |||| || ||||| ||||||||||| ||||||||| ||||||||| |  |||||||||| ||||    
T  10383855 aaaataaaatcaagctgttttcgtataatctatatgctgttttcgtaaactatcatatagagcttatggaaat 10383927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 30043828 - 30043784
Alignment:
Q  27 tttcatataatctataagctgttttcataaactatcctgaagagc 71  Q
    |||||||||  ||||||||||||||||||| |||| |||||||||    
T  30043828 tttcatatatgctataagctgttttcataagctatactgaagagc 30043784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 32143139 - 32143087
Alignment:
Q  15 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 67  Q
    |||||||||| |||| ||| ||  ||||||| |||||||||||||||||||||    
T  32143139 aagtcaaactgtttttatacaagttataagcggttttcataaactatcctgaa 32143087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 33209320 - 33209248
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||| |||| ||||||||||| ||||||||| |||| |||| |||| | | ||||||||| |||||    
T  33209320 aaaataaagtcgaactgttttcatataaactataagctatttttataagctattccggagagcttataaaaat 33209248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 27546 - 27599
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 62  Q
    |||| ||||||||| | ||||||||||| ||||||| |||||||||||||||||    
T  27546 aaaataaagtcaaattgttttcatataaactataagttgttttcataaactatc 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 12060 - 12111
Alignment:
Q  30 catataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||||| |||||||  |||||||||||||||| ||||||||||| |||||||    
T  12060 catatattctataaattgttttcataaactattctgaagagcttttgaaaat 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 6939 - 6994
Alignment:
Q  26 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 81  Q
    |||| |||||| ||||||||||||||  ||| ||||| ||||||||||||||||||    
T  6939 ttttaatataagctataagctgtttttgtaagctatcatgaagagcttatgaaaat 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 160053 - 159957
Alignment:
Q  29 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaattgtttccatta 127  Q
    ||||||||  |||||| ||||||||||| ||||||| |||||||| || |||  ||||  |||||| | |||  ||||||||||||| |||||||||||    
T  160053 tcatataagttataagatgttttcataagctatcctaaagagcttgtggaaa--taagctgaaaactgcttatagacatgtcataaactgtttccatta 159957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 40230 - 40276
Alignment:
Q  38 ctataagctgttttcataaactatcctgaagagcttatgaaaattta 84  Q
    ||||||| |||||||||||  ||||||||||||||||||||| ||||    
T  40230 ctataagttgttttcataagttatcctgaagagcttatgaaagttta 40276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 2710 - 2641
Alignment:
Q  11 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 80  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2710 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 4323 - 4271
Alignment:
Q  9 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactat 61  Q
    |||| ||||||||||  ||||||||||| |||||||||||||| |||| ||||    
T  4323 aaaataaagtcaaaccgttttcatataaactataagctgttttaataagctat 4271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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