View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1704_low_16 (Length: 381)

Name: NF1704_low_16
Description: NF1704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1704_low_16
NF1704_low_16
[»] chr3 (51 HSPs)
chr3 (14-179)||(32596623-32596788)
chr3 (286-373)||(31014336-31014423)
chr3 (287-373)||(29342341-29342427)
chr3 (285-373)||(25025764-25025852)
chr3 (299-373)||(3944907-3944981)
chr3 (170-270)||(32596805-32596906)
chr3 (287-373)||(44868618-44868704)
chr3 (287-373)||(55281835-55281921)
chr3 (287-373)||(23584237-23584323)
chr3 (299-373)||(23584883-23584957)
chr3 (287-373)||(23599060-23599146)
chr3 (299-373)||(23599706-23599780)
chr3 (287-373)||(37375468-37375554)
chr3 (284-373)||(8427743-8427832)
chr3 (300-373)||(31014924-31014997)
chr3 (299-373)||(25025186-25025260)
chr3 (299-373)||(32672178-32672252)
chr3 (299-373)||(37373977-37374051)
chr3 (303-373)||(44868023-44868093)
chr3 (299-373)||(50687708-50687782)
chr3 (287-370)||(37374609-37374692)
chr3 (299-370)||(50675128-50675199)
chr3 (287-373)||(24220579-24220665)
chr3 (287-373)||(41875616-41875702)
chr3 (287-373)||(48218591-48218677)
chr3 (287-373)||(19555923-19556012)
chr3 (287-362)||(41459130-41459204)
chr3 (299-373)||(42356245-42356322)
chr3 (310-373)||(55282421-55282484)
chr3 (307-373)||(47737673-47737739)
chr3 (305-373)||(19555288-19555356)
chr3 (299-373)||(37374832-37374901)
chr3 (299-373)||(48219235-48219309)
chr3 (329-373)||(43658895-43658939)
chr3 (286-373)||(47737063-47737149)
chr3 (331-373)||(29342993-29343035)
chr3 (316-373)||(43103928-43103985)
chr3 (329-373)||(38575063-38575107)
chr3 (329-373)||(49752315-49752359)
chr3 (323-370)||(49752913-49752960)
chr3 (331-373)||(38575642-38575684)
chr3 (287-365)||(43658255-43658332)
chr3 (288-370)||(50674630-50674707)
chr3 (333-373)||(40887941-40887981)
chr3 (327-373)||(24221172-24221218)
chr3 (309-367)||(50687124-50687182)
chr3 (332-373)||(32672783-32672824)
chr3 (287-336)||(38279409-38279458)
chr3 (287-336)||(46187033-46187082)
chr3 (299-331)||(31168565-31168597)
chr3 (340-373)||(8427269-8427302)
[»] chr6 (15 HSPs)
chr6 (288-373)||(5523201-5523286)
chr6 (287-373)||(30610711-30610797)
chr6 (287-373)||(6032158-6032244)
chr6 (287-373)||(12809069-12809155)
chr6 (299-373)||(5523846-5523920)
chr6 (299-373)||(33668233-33668307)
chr6 (287-370)||(33668833-33668916)
chr6 (299-373)||(12809702-12809776)
chr6 (299-373)||(13936640-13936714)
chr6 (299-373)||(30611345-30611419)
chr6 (300-373)||(31723846-31723919)
chr6 (291-373)||(13944294-13944376)
chr6 (299-373)||(33648163-33648237)
chr6 (300-373)||(6032753-6032826)
chr6 (329-373)||(31724448-31724493)
[»] chr4 (49 HSPs)
chr4 (287-373)||(36945223-36945309)
chr4 (287-373)||(20075525-20075611)
chr4 (287-373)||(55816450-55816536)
chr4 (290-373)||(25369786-25369869)
chr4 (299-373)||(12639977-12640051)
chr4 (283-373)||(35427242-35427331)
chr4 (299-373)||(52597711-52597785)
chr4 (287-373)||(198999-199085)
chr4 (299-373)||(199226-199300)
chr4 (287-373)||(389405-389491)
chr4 (284-370)||(12640589-12640675)
chr4 (299-373)||(25370392-25370466)
chr4 (299-373)||(31876800-31876874)
chr4 (287-373)||(36111217-36111302)
chr4 (286-372)||(48090465-48090551)
chr4 (287-373)||(52597490-52597576)
chr4 (287-372)||(26423759-26423844)
chr4 (287-370)||(48782077-48782160)
chr4 (299-373)||(2713843-2713917)
chr4 (299-373)||(20422731-20422805)
chr4 (299-373)||(26424404-26424478)
chr4 (299-373)||(37567474-37567548)
chr4 (299-373)||(55815837-55815911)
chr4 (300-373)||(48091095-48091168)
chr4 (299-370)||(388765-388836)
chr4 (287-370)||(40345133-40345216)
chr4 (287-373)||(32902465-32902551)
chr4 (299-373)||(40847689-40847763)
chr4 (304-373)||(36944627-36944696)
chr4 (289-373)||(28223565-28223649)
chr4 (303-373)||(6862663-6862733)
chr4 (287-361)||(20422131-20422205)
chr4 (299-373)||(32291027-32291101)
chr4 (299-373)||(32901863-32901937)
chr4 (287-373)||(40848130-40848216)
chr4 (299-372)||(33569732-33569805)
chr4 (286-370)||(31877435-31877520)
chr4 (287-373)||(3708779-3708859)
chr4 (300-373)||(29809087-29809160)
chr4 (330-373)||(20076186-20076229)
chr4 (304-370)||(31842726-31842791)
chr4 (300-373)||(40344516-40344589)
chr4 (300-364)||(47321772-47321836)
chr4 (331-373)||(48781526-48781568)
chr4 (331-372)||(47328397-47328438)
chr4 (287-336)||(52869447-52869496)
chr4 (338-373)||(37566954-37566989)
chr4 (287-366)||(52722080-52722158)
chr4 (287-336)||(3221424-3221473)
[»] chr2 (36 HSPs)
chr2 (286-373)||(28224388-28224475)
chr2 (287-370)||(6849288-6849371)
chr2 (287-373)||(16887583-16887669)
chr2 (299-373)||(28223800-28223874)
chr2 (290-373)||(10883290-10883373)
chr2 (287-373)||(3595246-3595332)
chr2 (299-373)||(4386960-4387034)
chr2 (299-373)||(9224278-9224352)
chr2 (290-373)||(39477325-39477408)
chr2 (299-373)||(7716683-7716757)
chr2 (299-373)||(8113300-8113374)
chr2 (299-373)||(16571130-16571204)
chr2 (287-373)||(16571726-16571812)
chr2 (299-373)||(20244171-20244245)
chr2 (299-370)||(6849545-6849616)
chr2 (299-370)||(16903092-16903163)
chr2 (287-373)||(7583132-7583218)
chr2 (287-373)||(7717285-7717370)
chr2 (291-373)||(11256120-11256202)
chr2 (287-354)||(4386355-4386422)
chr2 (299-370)||(8963516-8963587)
chr2 (287-370)||(40166846-40166929)
chr2 (299-373)||(7583793-7583867)
chr2 (299-373)||(11256740-11256814)
chr2 (301-373)||(30161947-30162019)
chr2 (299-373)||(3595895-3595969)
chr2 (287-361)||(8112680-8112754)
chr2 (299-373)||(33847885-33847959)
chr2 (299-373)||(40165885-40165959)
chr2 (316-373)||(467134-467191)
chr2 (313-373)||(20243579-20243639)
chr2 (306-373)||(39476534-39476601)
chr2 (287-373)||(17918021-17918107)
chr2 (302-373)||(467341-467412)
chr2 (338-373)||(17918685-17918720)
chr2 (299-336)||(44829315-44829352)
[»] chr7 (30 HSPs)
chr7 (286-373)||(47814635-47814722)
chr7 (287-373)||(34853391-34853477)
chr7 (288-370)||(36683467-36683549)
chr7 (286-373)||(24044043-24044130)
chr7 (287-370)||(42456519-42456602)
chr7 (287-373)||(19816264-19816350)
chr7 (299-373)||(4895082-4895156)
chr7 (300-370)||(19816895-19816965)
chr7 (299-373)||(34853996-34854070)
chr7 (299-373)||(36682847-36682921)
chr7 (287-373)||(46814405-46814491)
chr7 (301-373)||(47813985-47814057)
chr7 (299-370)||(22276079-22276150)
chr7 (303-373)||(4894515-4894585)
chr7 (287-373)||(22275425-22275510)
chr7 (287-373)||(24323982-24324067)
chr7 (299-373)||(42455933-42456007)
chr7 (299-373)||(27855578-27855651)
chr7 (291-373)||(30711792-30711874)
chr7 (299-373)||(46732579-46732653)
chr7 (299-373)||(33805981-33806055)
chr7 (303-373)||(46815062-46815132)
chr7 (329-373)||(18520899-18520943)
chr7 (329-373)||(32499291-32499335)
chr7 (329-373)||(32499872-32499916)
chr7 (287-370)||(36620743-36620820)
chr7 (300-370)||(36620131-36620201)
chr7 (335-370)||(46012943-46012978)
chr7 (287-341)||(27856162-27856216)
chr7 (287-336)||(84377-84426)
[»] chr5 (23 HSPs)
chr5 (286-373)||(26687499-26687586)
chr5 (286-373)||(26957230-26957317)
chr5 (299-373)||(3957512-3957586)
chr5 (287-373)||(4928871-4928957)
chr5 (299-370)||(4929509-4929580)
chr5 (300-373)||(8813683-8813756)
chr5 (287-373)||(21769994-21770084)
chr5 (299-373)||(28075969-28076043)
chr5 (299-373)||(33430055-33430128)
chr5 (291-370)||(3958137-3958216)
chr5 (287-373)||(3739663-3739749)
chr5 (299-373)||(5324403-5324477)
chr5 (306-373)||(42408011-42408078)
chr5 (331-373)||(42408565-42408607)
chr5 (287-351)||(5324304-5324368)
chr5 (329-373)||(13738102-13738146)
chr5 (288-345)||(8813078-8813135)
chr5 (329-373)||(3739042-3739086)
chr5 (338-373)||(26688057-26688092)
chr5 (338-373)||(26957788-26957823)
chr5 (299-336)||(25075034-25075071)
chr5 (299-336)||(25133003-25133040)
chr5 (287-336)||(39148768-39148817)
[»] chr8 (34 HSPs)
chr8 (287-373)||(11998456-11998542)
chr8 (287-373)||(30115996-30116082)
chr8 (287-373)||(36848197-36848283)
chr8 (299-373)||(7818486-7818560)
chr8 (299-373)||(33114188-33114262)
chr8 (287-373)||(43591007-43591093)
chr8 (287-370)||(43481284-43481367)
chr8 (299-373)||(16889207-16889281)
chr8 (299-373)||(35237271-35237345)
chr8 (287-373)||(40907599-40907684)
chr8 (287-373)||(44061985-44062071)
chr8 (300-373)||(39852167-39852240)
chr8 (305-373)||(40309500-40309568)
chr8 (286-373)||(7819097-7819184)
chr8 (289-372)||(35237865-35237947)
chr8 (287-373)||(4373686-4373772)
chr8 (299-373)||(11999080-11999154)
chr8 (287-373)||(16889828-16889913)
chr8 (299-373)||(43480628-43480702)
chr8 (292-373)||(16880518-16880599)
chr8 (305-373)||(38778172-38778240)
chr8 (306-373)||(30115386-30115453)
chr8 (286-373)||(39852803-39852890)
chr8 (303-370)||(44062599-44062666)
chr8 (299-373)||(33113587-33113661)
chr8 (299-373)||(43591616-43591690)
chr8 (300-370)||(4374995-4375065)
chr8 (299-373)||(10806437-10806511)
chr8 (299-373)||(16879900-16879974)
chr8 (329-373)||(4374301-4374345)
chr8 (287-370)||(38778798-38778881)
chr8 (313-373)||(2209032-2209092)
chr8 (329-373)||(10805990-10806034)
chr8 (287-331)||(37533319-37533363)
[»] chr1 (35 HSPs)
chr1 (286-373)||(52859788-52859875)
chr1 (287-373)||(43368835-43368921)
chr1 (299-373)||(1403052-1403126)
chr1 (287-373)||(1403688-1403773)
chr1 (287-373)||(7219648-7219733)
chr1 (299-373)||(8560168-8560242)
chr1 (287-373)||(8560743-8560828)
chr1 (287-373)||(27797117-27797203)
chr1 (287-373)||(42839701-42839787)
chr1 (301-373)||(42839548-42839620)
chr1 (289-373)||(48843582-48843666)
chr1 (287-370)||(42840316-42840399)
chr1 (299-373)||(27797736-27797810)
chr1 (291-373)||(49533747-49533829)
chr1 (299-371)||(27817006-27817078)
chr1 (299-373)||(6288204-6288278)
chr1 (299-373)||(42838949-42839023)
chr1 (299-373)||(49534396-49534470)
chr1 (300-373)||(43368203-43368276)
chr1 (286-373)||(51248483-51248570)
chr1 (287-373)||(41563179-41563265)
chr1 (312-373)||(48369507-48369568)
chr1 (299-373)||(7782691-7782765)
chr1 (329-373)||(48843962-48844006)
chr1 (309-373)||(27934295-27934358)
chr1 (331-373)||(37725423-37725465)
chr1 (332-373)||(41563792-41563833)
chr1 (329-373)||(7219050-7219094)
chr1 (339-373)||(6287672-6287706)
chr1 (335-373)||(51247876-51247914)
chr1 (330-371)||(37725672-37725713)
chr1 (329-373)||(52859191-52859235)
chr1 (300-334)||(43352827-43352861)
chr1 (303-336)||(29152348-29152381)
chr1 (287-328)||(48620368-48620409)
[»] scaffold0229 (1 HSPs)
scaffold0229 (299-373)||(15233-15307)
[»] scaffold0007 (1 HSPs)
scaffold0007 (299-373)||(11278-11351)
[»] scaffold1095 (1 HSPs)
scaffold1095 (287-373)||(1485-1571)
[»] scaffold0368 (1 HSPs)
scaffold0368 (299-373)||(11784-11858)
[»] scaffold0039 (1 HSPs)
scaffold0039 (299-336)||(90627-90664)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 5e-84; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 32596623 - 32596788
Alignment:
Q  14 gaaaaatgattgtcgaccactagtgctaagaggaattcccaaacaggaaaacttggcaatgatgtgttgaactagctagataactttggacggcaaatat 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32596623 gaaaaatgattgtcgaccactagtcctaagaggaattcccaaacaggaaaacttggcaatgatgtgttgaactagctagataactttggacggcaaatat 32596722  T
Q  114 atggcaaatattagtgtatcacgtttactaaccctagctttatagggacattcaagaaaagtagca 179  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32596723 atggcaaatattagtgtatcacgattactaaccctagctttatagggacattcaagaaaagtagca 32596788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 31014336 - 31014423
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31014336 gggtgtgtgttcacatgagaaagattaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 31014423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 29342341 - 29342427
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29342341 ggtgtgtgttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 29342427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 25025852 - 25025764
Alignment:
Q  285 ggggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  25025852 ggggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagagaagaacatattctt 25025764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 3944907 - 3944981
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3944907 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 3944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 32596805 - 32596906
Alignment:
Q  170 aaaagtagcactaatggagaatgaagttgataaatgtgaaaccnnnnnnnnn-tccaactatccaccatttttggccacaacaatttatatgttagaatc 268  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  32596805 aaaagtagcactaatggagaatgaagttgataaatgtgaaaccaaaaaaaaactccaactatccaccatttttggccacaacaatttatatgttagaatc 32596904  T
Q  269 ta 270  Q
    ||    
T  32596905 ta 32596906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 44868704 - 44868618
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  44868704 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaatttgattcaatgattagattaagtgaagaacatattctt 44868618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 55281835 - 55281921
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  55281835 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaattggatttaatgattagattaagtgaagaacatattctt 55281921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 23584237 - 23584323
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  23584237 ggtgtgtgttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattctt 23584323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 23584957 - 23584883
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23584957 catgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattctt 23584883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 23599060 - 23599146
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  23599060 ggtgtgtgttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattctt 23599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 23599780 - 23599706
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23599780 catgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattctt 23599706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 37375554 - 37375468
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  37375554 ggtgtgtgtttacatgggaaaggttaatcctttcccaccataagaaagttggattcgatgattagattaagtgaagaacatcttctt 37375468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 8427832 - 8427743
Alignment:
Q  284 tggggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  8427832 tggggtatgtgttcacatggggaaggttaatcctttcccaccatgggaaagttagatttaatgattagattaagtgaagaacatattctt 8427743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 31014997 - 31014924
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31014997 atgggaaaggttaatcttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatattctt 31014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 25025186 - 25025260
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  25025186 catgggaaaggttaatcctttcccatcatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 25025260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 32672178 - 32672252
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  32672178 catgggaaaggttaatcctttcccaacatgggaaagttggatttaatgattagattaagtgaagaacatattctt 32672252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 37373977 - 37374051
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  37373977 catgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattctt 37374051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 44868023 - 44868093
Alignment:
Q  303 ggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  44868023 ggaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattctt 44868093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 50687782 - 50687708
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  50687782 catgggaaaggttaattctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 50687708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 37374692 - 37374609
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||| ||| ||||||||| ||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37374692 ggtgtgtattcacatgggaaatgttaaccttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatatt 37374609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 50675199 - 50675128
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  50675199 catgggaaaggttaatcctttttcacaatgggaaagttgaattcaatgattagattaagtgaagaacatatt 50675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 24220579 - 24220665
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||||||||||||||| |||| | ||||| | ||| |||||||||||||| ||||||||||||||||||||||||    
T  24220579 ggtgtgtgttcacatgggaaaggttaattctttcctaccatggaaaaattggattcaatgatcagattaagtgaagaacatattctt 24220665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 41875702 - 41875616
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||  |||||||| ||||||| ||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  41875702 ggtgtgtgttcagatgggaaaagttaatcattttttaccatgggaaagttgggttcaatgattagattaagtgaagaacatattctt 41875616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 48218591 - 48218677
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||| |||||||||||| ||| |||| || | ||||||||||||||||||||||||||||||| |||||||||||    
T  48218591 ggtgtgtgttcacatgagaaaggttaatcttttcccactatggaaaagttggattcaatgattagattaagtgaataacatattctt 48218677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 19556012 - 19555923
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttg---gattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||| |||||||||||||||| ||| ||| ||||||| |   ||||||||||||||||||||||||||||||||||||    
T  19556012 ggtgtgtgttcacatgagaaaggttaatcctttcccatcatgggaaagtagtaggattcaatgattagattaagtgaagaacatattctt 19555923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 41459130 - 41459204
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaag 362  Q
    ||||||||||| ||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||    
T  41459130 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgagaaagtt-gattcaatgattagattaagtgaag 41459204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 42356245 - 42356322
Alignment:
Q  299 catgggaaaggttaatccttttccacca---taggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| |||||||| ||||||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  42356245 catgggaaaggtcaatcctttcccaccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 42356322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 55282484 - 55282421
Alignment:
Q  310 ttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  55282484 ttaatcctttcccaccatgggaaagttggatttaatgattagattaagtgaagaacatattctt 55282421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 373
Target Start/End: Complemental strand, 47737739 - 47737673
Alignment:
Q  307 aggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  47737739 aggttaatcatttcccaccatgggaatgttggattcaatgattagattaagtgaagaacatattctt 47737673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 19555288 - 19555356
Alignment:
Q  305 aaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  19555288 aaaggttaatcttttcccatcatgggaaagttggattaaatgattagattaagtgaagaacatattctt 19555356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 37374832 - 37374901
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||      |||||||||||||||||||||||||||||||||||||||||||||    
T  37374832 catgggaaaggttaatcctttcccg-----ggaaagttggattcaatgattagattaagtgaagaacatattctt 37374901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 48219309 - 48219235
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||||| ||| ||||||||    
T  48219309 catgggaaaggttaattctttctcaccatgggaaaattggattcaatgattagattaagtgatgaatatattctt 48219235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 43658939 - 43658895
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43658939 ggaaagttggattcaatgattagattaagtgaagaacatattctt 43658895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 47737063 - 47737149
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||   ||||||||||||| |||||| ||||| | || ||||||||||||| |||||||||||||| |||||||||||||    
T  47737063 gggtgtgtgttaatatgggaaaggttattcctttcccacc-tgggtaagttggattcaacgattagattaagtggagaacatattctt 47737149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 29343035 - 29342993
Alignment:
Q  331 aaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29343035 aaagttggattcaatgattagattaagtgaagaacatattctt 29342993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 43103928 - 43103985
Alignment:
Q  316 cttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  43103928 ctttcccaccataggaaagttggattcaacgattggattaagtgaataacatattctt 43103985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 38575063 - 38575107
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  38575063 ggaaagttggattcaatgattagattaaatgaagaacatattctt 38575107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 49752315 - 49752359
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  49752315 ggaaagtaggattcaatgattagattaagtgaagaacatattctt 49752359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 49752960 - 49752913
Alignment:
Q  323 accataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  49752960 accatgggaaagttggattcaatgattagattaagtgaagaatatatt 49752913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 38575684 - 38575642
Alignment:
Q  331 aaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  38575684 aaagttggattcaatgattaaattaagtgaagaacatattctt 38575642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 43658255 - 43658332
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaac 365  Q
    ||||||||||| ||||| || ||||||||||||   || || ||||||||| |||||||||||||||||||||||||||    
T  43658255 ggtgtgtgttcacatggaaacggttaatcctttcttactatgggaaagttg-attcaatgattagattaagtgaagaac 43658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 370
Target Start/End: Original strand, 50674630 - 50674707
Alignment:
Q  288 gtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||| |||| |||||||||||| ||| ||||||| |||||||||||||     ||||||||||||| ||||||||||    
T  50674630 gtgtgtgttcacatgagaaaggttaatcttttcccaccatgggaaagttggatt-----attagattaagtgtagaacatatt 50674707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 40887981 - 40887941
Alignment:
Q  333 agttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  40887981 agttgtattcaatgattagattaagtgaagaacatattctt 40887941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 24221218 - 24221172
Alignment:
Q  327 taggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  24221218 taggaaagttggatttaatgattatattaagtgaagaacacattctt 24221172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 50687124 - 50687182
Alignment:
Q  309 gttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacat 367  Q
    |||||| ||||||||| ||  |||||||||||||||| ||||||||||||||| |||||    
T  50687124 gttaatacttttccactatgagaaagttggattcaataattagattaagtgaataacat 50687182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 332 - 373
Target Start/End: Complemental strand, 32672824 - 32672783
Alignment:
Q  332 aagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  32672824 aagttggatttaatgattagattaagcgaagaacatattctt 32672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 38279409 - 38279458
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||||||||    
T  38279409 ggtgtgtgttcacatgggaaaggtgaatcctttcccaccatgggaaagtt 38279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 46187082 - 46187033
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||| |||||||||||| ||||||||  |||||||||||||||    
T  46187082 ggtgtgtgttcacatgggaaaggtgaatcctttctcaccataggaaagtt 46187033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 31168597 - 31168565
Alignment:
Q  299 catgggaaaggttaatccttttccaccatagga 331  Q
    |||||||||||||||||||||||||||||||||    
T  31168597 catgggaaaggttaatccttttccaccatagga 31168565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 8427269 - 8427302
Alignment:
Q  340 ttcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  8427269 ttcaatgattagattaaatgaagaacatattctt 8427302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 5523201 - 5523286
Alignment:
Q  288 gtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5523201 gtgtgtgttcacatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 5523286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 30610711 - 30610797
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  30610711 ggtgtgtgttcgcatgggaaaggttaatcattttccaccatgggaaaattggattcaatgattagattaagtgaagaacatattctt 30610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 6032158 - 6032244
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  6032158 ggtgtgtgttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattctt 6032244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 12809069 - 12809155
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12809069 ggtgtgtgttcacatgggaaaggttaatcctttcccactataggaaagttggatgcaatgattagattaagtgaagaacatattctt 12809155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 5523920 - 5523846
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  5523920 catgggaaaggttaatcttttcccaccattggaaagtttgattcaatgattagattaagtgaagaacatattctt 5523846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 33668233 - 33668307
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  33668233 catgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattctt 33668307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 33668916 - 33668833
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||| ||| ||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33668916 ggtgtgtgttcacattggaaatgttaatcatttcccaccatagaaaagttggattcaatgattagattaagtgaagaatatatt 33668833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 12809776 - 12809702
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| |||   | |||||||||||||||||||||||||||||||||||||||||||||    
T  12809776 catgggaaaggttaatcctttcccatggtgggaaagttggattcaatgattagattaagtgaagaacatattctt 12809702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 13936714 - 13936640
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||| ||||||||||||||    
T  13936714 catgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtaaagaacatattctt 13936640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 30611419 - 30611345
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  30611419 catgagaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaactgaagaacatattctt 30611345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 31723846 - 31723919
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||| | ||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  31723846 atgggaaaggttaatcctttcctaccatgggaaatttggatttaatgattagattaagtgaagaacatattctt 31723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 13944294 - 13944376
Alignment:
Q  291 tgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||  ||||||||| |||||| ||| ||| ||| ||||||||| |||||||||||||||||| ||||||||||||||||    
T  13944294 tgtgttcatatgggaaagattaatcatttcccatcatgggaaagttgaattcaatgattagattaaatgaagaacatattctt 13944376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 33648237 - 33648163
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| ||| ||||  |||||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  33648237 catgggaaaggtcaattctttcacaccataggaaaattggattcaatgattgaattaagtgaagaatatattctt 33648163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 6032826 - 6032753
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||| ||||||||||  |||  ||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  6032826 atggaaaaggttaattttttctcaccatgagaaagttagattcaatgattagattaagtgaagaacatattctt 6032753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 31724493 - 31724448
Alignment:
Q  329 ggaaagttggattcaatga-ttagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||    
T  31724493 ggaaagttggattcaatgattttgattaagtgaagaatatattctt 31724448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 36945309 - 36945223
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36945309 ggtgtgtgttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 36945223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 20075525 - 20075611
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20075525 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 20075611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 55816536 - 55816450
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  55816536 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 55816450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 25369786 - 25369869
Alignment:
Q  290 gtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25369786 gtgtgttcacatgggaaaggttaatccttttccactatgggaaagttggattcaatgattagattaagtgaagaacatattctt 25369869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 12639977 - 12640051
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12639977 catgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 12640051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 35427242 - 35427331
Alignment:
Q  283 gtggggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  35427242 gtggggtgtgtgttcacatgggaaaggttaatccttttccgccatgggaaa-ttggattcaatgattagattaagtgaagaacatattctt 35427331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 52597785 - 52597711
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52597785 catgggaaaggttaatcctttttcaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 52597711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 198999 - 199085
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  198999 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttaaattcaatgattagattaagtgaagaacatattctt 199085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 199300 - 199226
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  199300 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 199226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 389491 - 389405
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  389491 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcagtgattagattaagtgaagaacatattctt 389405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 12640675 - 12640589
Alignment:
Q  284 tggggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  12640675 tggggtgtgtgttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagcgaagaacatatt 12640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 25370466 - 25370392
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25370466 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 25370392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 31876800 - 31876874
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  31876800 catgggaaaggttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 31876874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 36111302 - 36111217
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  36111302 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaa-ttggattcaatgattagattaagtgaagaacatattctt 36111217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 48090465 - 48090551
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattct 372  Q
    |||||||||||| |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  48090465 gggtgtgtgttcacatgggaaaggttaatccattcccaccatgggaaagttggattcaatgattagattaagtgtagaacatattct 48090551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 52597490 - 52597576
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  52597490 ggtgtgtgttcacatgggaaaggttaatcttttcccaccatgggaaagttagattcaatgattagattaagtgaagaacatattctt 52597576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 287 - 372
Target Start/End: Original strand, 26423759 - 26423844
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattct 372  Q
    ||||||||||| ||||||||||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  26423759 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgaaaaagttggattcaatgattagattaagtgaagaacatattct 26423844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 48782160 - 48782077
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||| ||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48782160 ggtgtgtgttcacatgggaaaggttaatcatttcgcaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 48782077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 2713917 - 2713843
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  2713917 catgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 2713843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 20422805 - 20422731
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  20422805 catgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 20422731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 26424478 - 26424404
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26424478 catgggaaaggttagttcttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 26424404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 37567548 - 37567474
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  37567548 catgggaaaggttaatacttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattctt 37567474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 55815837 - 55815911
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  55815837 catgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattctt 55815911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 48091168 - 48091095
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48091168 atgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 48091095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 388765 - 388836
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  388765 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatatt 388836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 40345216 - 40345133
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||| ||||||||||||||||| ||| |||| || |||||||| |||||||||||||||||||||||||||||||||    
T  40345216 ggtgtgtgttcacatgggaaaggttaatcttttcccacaatgggaaagttagattcaatgattagattaagtgaagaacatatt 40345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 32902551 - 32902465
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||| |||||||||||  ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  32902551 ggtgtgtgttcacatgagaaaggttaatattttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 32902465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 40847689 - 40847763
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  40847689 catggaaaaggttaatcctttcccaccatgagaaagttggattcaatgattagattaagtgaagaacatattctt 40847763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 36944627 - 36944696
Alignment:
Q  304 gaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  36944627 gaaaggttaatctttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 36944696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 28223565 - 28223649
Alignment:
Q  289 tgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| ||||||||||||||||| ||| || | ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  28223565 tgtgtgttcacatgggaaaggttaatcttttccctctatgagaaagttggattcaatgattagattaagtgaagaacatattctt 28223649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 6862663 - 6862733
Alignment:
Q  303 ggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6862663 ggaaaggtcaatctttttctaccataggaaagttggattcaaagattagattaagtgaagaacatattctt 6862733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 20422131 - 20422205
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaa 361  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||    
T  20422131 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaggtagattcaatgattagattaagtgaa 20422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 32291027 - 32291101
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32291027 catgggaaaggttaatcatttccaatcatgggaaagttggattcaatgattagattaagtgaagaacatattctt 32291101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 32901863 - 32901937
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| | | ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  32901863 catgggaaaagattatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattctt 32901937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 40848216 - 40848130
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||| ||||||||||| |||  ||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  40848216 ggtgtgtgttcacatggaaaaggttaatcatttctcactatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 40848130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 299 - 372
Target Start/End: Original strand, 33569732 - 33569805
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattct 372  Q
    |||||||||||| |||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  33569732 catgggaaaggtcaatcctttcccaccatggaaaagttggattcaataattagattaagtgaagaacatattct 33569805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 370
Target Start/End: Complemental strand, 31877520 - 31877435
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggtt-aatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||||| ||||| ||| ||| ||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||||||    
T  31877520 gggtgtgtgttcacatggaaaaagtttaatcctttttcactatgggaaagttggatttaatgattagattaagtgaagaacatatt 31877435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 3708779 - 3708859
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||      ||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  3708779 ggtgtgtgttcacatgggaaaggttaatcc------accatgggaaagttggattcaatgattagattaagtaaagaacatactctt 3708859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 29809160 - 29809087
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| |||   | ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  29809160 atgggaaaggttaatcatttcttatcatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 29809087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 330 - 373
Target Start/End: Complemental strand, 20076229 - 20076186
Alignment:
Q  330 gaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20076229 gaaagttggattcaatgattagattaagtgaagaacatattctt 20076186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 31842791 - 31842726
Alignment:
Q  304 gaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  31842791 gaaaggttaatcatttccaaccatgggaaagt-ggattcaatgattagattaagtgaagaacatatt 31842726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 40344516 - 40344589
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| ||||||||||  || |||  |||||||||||| ||| |||||||||||||||||||||||||||    
T  40344516 atgggaaagtttaatcctttctcatcatgagaaagttggattaaattattagattaagtgaagaacatattctt 40344589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 364
Target Start/End: Original strand, 47321772 - 47321836
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaa 364  Q
    ||||||||||||||||||||  ||| || | ||||||||||| ||||||||||||||||||||||    
T  47321772 atgggaaaggttaatcctttatcactatggaaaagttggatttaatgattagattaagtgaagaa 47321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 48781526 - 48781568
Alignment:
Q  331 aaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  48781526 aaagttggattcaatgattagattaagtgatgaatatattctt 48781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 47328438 - 47328397
Alignment:
Q  331 aaagttggattcaatgattagattaagtgaagaacatattct 372  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  47328438 aaagttagattcaataattagattaagtgaagaacatattct 47328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 52869447 - 52869496
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||||||||    
T  52869447 ggtgtgtgttcacatgggaaaggtgaatcctttcccaccatgggaaagtt 52869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 37566954 - 37566989
Alignment:
Q  338 gattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37566954 gattcaatgattaaattaagtgaagaacatattctt 37566989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 366
Target Start/End: Complemental strand, 52722158 - 52722080
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaaca 366  Q
    ||||| ||||| ||||||||||||||||||||||||| ||| ||||||||   || ||  |||||||||| |||||||||    
T  52722158 ggtgtttgttcacatgggaaaggttaatccttttccatcat-ggaaagttaactttaaccattagattaattgaagaaca 52722080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 3221473 - 3221424
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||| |||||||||||| |||||||| |||| || ||||||||    
T  3221473 ggtgtgtgttcacatgggaaaggtgaatcctttcccacgatgggaaagtt 3221424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 28224475 - 28224388
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28224475 gggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 28224388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 287 - 370
Target Start/End: Original strand, 6849288 - 6849371
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6849288 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 6849371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 16887583 - 16887669
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  16887583 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggatagttggattcaatgattagattaagtgaagaacatattctt 16887669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 28223800 - 28223874
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28223800 catgggaaaggttaatcctttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 28223874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 10883290 - 10883373
Alignment:
Q  290 gtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  10883290 gtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtaaagaacatattctt 10883373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 3595246 - 3595332
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  3595246 ggtgtgtgttcacatgggaaaggttaattctttcccaccatgggaaagttggattcaatgattagataaagtgaagaacatattctt 3595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 4387034 - 4386960
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4387034 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 4386960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 9224278 - 9224352
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9224278 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 9224352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 39477408 - 39477325
Alignment:
Q  290 gtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||  |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39477408 gtgtgttcatatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 39477325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 7716683 - 7716757
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7716683 catgggaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 7716757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 8113374 - 8113300
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  8113374 catgggaaaggttaatccttttccaccatgggaaagttggattcgatgattagattatgtgaagaacatattctt 8113300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 16571130 - 16571204
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  16571130 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatattctt 16571204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 16571812 - 16571726
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  16571812 ggtgtgtgttcacatgggaaaggttaatcctttcccatcatgggaaaattggattcaatgattagatcaagtgaagaacatattctt 16571726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 20244245 - 20244171
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  20244245 catgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 20244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 6849616 - 6849545
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6849616 catggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 6849545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 16903163 - 16903092
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  16903163 catgggaaaggttaatccttttccaccatgagaaagttggattcaatgattagattaagtgaataacatatt 16903092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 7583132 - 7583218
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||| ||||||||||||||||| |||||||  |||| ||||||||||||||||||||| |||||||||||||||||    
T  7583132 ggtgtgtgttcacatcggaaaggttaatcctttcccaccatgagaaaattggattcaatgattagattaggtgaagaacatattctt 7583218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 7717370 - 7717285
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||||||||||||||||||||  |||||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  7717370 ggtgtgtgttcacatgggaaaggttaatcctttctcaccatgggaaagtt-gattcaatgattatattaagtgaagaacatattctt 7717285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 11256120 - 11256202
Alignment:
Q  291 tgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||| ||||||||||||||||| |||  |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  11256120 tgtgttcacatgggaaaggttaatcatttctcaccatggtaaagttggattcaatgattagattaagtgaagaacatattctt 11256202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 4386355 - 4386422
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagatt 354  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  4386355 ggtgtgtgttcacatgggaaaggttaatactttcccaccataggaaagttggattcaatgattagatt 4386422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 8963516 - 8963587
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  8963516 catgggaaaggttaatccttttctatcatgggaaagttggattcaatgattagattaagtgaaaaacatatt 8963587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 40166929 - 40166846
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||| || ||| ||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  40166929 ggtgtgtgctcacataggaaaggttaatcctttcccaccatgggaaaattggattcaatgattagattaagtcaagaacatatt 40166846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 7583867 - 7583793
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  7583867 catgggaaaggttaatcttttcccactatgggaaagttggattcaatgattagcttaagtgaagaacatattctt 7583793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 11256814 - 11256740
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  11256814 catggaaaaggttaatcattttccaccatgagaaagttggattcaatgattagattaagtgaagaatatattctt 11256740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 30161947 - 30162019
Alignment:
Q  301 tgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  30161947 tgggaaaagttaatcctttcccatcatggaaaagttggattcaatgattagattaagtgaagaacatattctt 30162019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 3595969 - 3595895
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| |||||||||||| || ||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  3595969 catgggaaatgttaatcctttttcatcatggaaaagttggattcaatgattagattaagtgaaaaacatattctt 3595895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 8112680 - 8112754
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaa 361  Q
    ||||||||||| |||| |||| |||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  8112680 ggtgtgtgttcacatgagaaatgttaatcctttctcaccatgggaaagttggattcaatgattagattaagtgaa 8112754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 33847885 - 33847959
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||  |||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||||||    
T  33847885 catgggaaaggccaatccttttccaccatgggaaagatggattcaacaattagattaagtgaagaacatattctt 33847959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 40165885 - 40165959
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||   |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  40165885 catgggaaagaccaatcattttccaccatgggaaagttggattcaatgattggattaagtgaagaacatattctt 40165959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 467134 - 467191
Alignment:
Q  316 cttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  467134 cttttccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattctt 467191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 20243579 - 20243639
Alignment:
Q  313 atccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  20243579 atcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattctt 20243639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 39476534 - 39476601
Alignment:
Q  306 aaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||| |||| || ||||||||  |||||||||||||||||||||||||| ||||||||    
T  39476534 aaggttaatcctttcccactatgggaaagtttaattcaatgattagattaagtgaagaatatattctt 39476601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 17918021 - 17918107
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||  |||| ||||||||||||||||| |   || | |||||| ||||||||||||||||||||||||||| ||||||||    
T  17918021 ggtgtgtgtttacatgagaaaggttaatcctttttctttatggaaaagttagattcaatgattagattaagtgaagaatatattctt 17918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 302 - 373
Target Start/End: Complemental strand, 467412 - 467341
Alignment:
Q  302 gggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||| ||||||||| |   ||||||| ||||||| |||| ||||||||||||||||||||||    
T  467412 gggaaaggttaatcattttccaccgtgaaaaagttgaattcaataattaaattaagtgaagaacatattctt 467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 17918720 - 17918685
Alignment:
Q  338 gattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||| |||||||||||||||||||||||||||    
T  17918720 gattcaattattagattaagtgaagaacatattctt 17918685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 44829352 - 44829315
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagtt 336  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  44829352 catgggaatggtgaatccttttccaccataggaaagtt 44829315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 47814722 - 47814635
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47814722 gggtgtgtgttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 47814635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 34853391 - 34853477
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  34853391 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 34853477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 288 - 370
Target Start/End: Complemental strand, 36683549 - 36683467
Alignment:
Q  288 gtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36683549 gtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 36683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 24044130 - 24044043
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  24044130 gggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttttattcaatgattagattaagtgaagaacatattctt 24044043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 42456602 - 42456519
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  42456602 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattacattaagtgaagaacatatt 42456519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 19816264 - 19816350
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  19816264 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgtaaaacatattctt 19816350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 4895156 - 4895082
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  4895156 catgggaaaggttaatcattttccaccatgggaaagttggattcaattattagattaagtgaagaacatattctt 4895082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 19816965 - 19816895
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  19816965 atgggaaaggttaatccttttccaccatgggaaagttggattaaatgattagattaagtgaagaacatatt 19816895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 34854070 - 34853996
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  34854070 catgggaaaggttaatcctttcccaccataggaaagttagagtcaatgattagattaagtgaagaacatattctt 34853996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 36682847 - 36682921
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36682847 catgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 36682921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 46814405 - 46814491
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||  ||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  46814405 ggtgtgtgtttacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaacgattagattaagtgaagaacatattctt 46814491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 47813985 - 47814057
Alignment:
Q  301 tgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  47813985 tgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 47814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 22276150 - 22276079
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  22276150 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatatt 22276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 4894515 - 4894585
Alignment:
Q  303 ggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  4894515 ggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 4894585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 22275425 - 22275510
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  22275425 ggtgtgtgttcacatggaaaaggttaatcatttcccaccatgggaaagttg-attcaatgattagattaagtgaagaacatattctt 22275510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 24324067 - 24323982
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||| ||| |||| || ||||| ||||||||||| |||||||||||||||||||||||||||    
T  24324067 ggtgtgtgttcacatgggaaaggttaatcatttcccactatgggaaa-ttggattcaataattagattaagtgaagaacatattctt 24323982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 42455933 - 42456007
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||  ||||| |||||||||||||||| ||||||||||||||||||||||    
T  42455933 catgggaaaggttaatcctttcccaccacgggaaaattggattcaatgattaaattaagtgaagaacatattctt 42456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 27855578 - 27855651
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| |||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  27855578 catgggaaaggttaatcatttcccaccatgagaaagttg-attcaatgattagattaagtgaagaacatattctt 27855651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 30711792 - 30711874
Alignment:
Q  291 tgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||| ||||| ||||||||||  ||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  30711792 tgtgttcacatggaaaaggttaattttttcccaccatggaaaagttggattcaattattagattaagtgaagaacatattctt 30711874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 46732579 - 46732653
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| |||| |||| || | ||||||||||||||||||||||||||||||| |||||||||||    
T  46732579 catgggaaaggttaattctttcccactatggaaaagttggattcaatgattagattaagtgaataacatattctt 46732653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 33805981 - 33806055
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||   |||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  33805981 catgggaaagaccaatcattttccaccatggaaaagttggattcaatgattaaattaagtgaagaacatattctt 33806055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 373
Target Start/End: Complemental strand, 46815132 - 46815062
Alignment:
Q  303 ggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||  ||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  46815132 ggaaaagttaattatttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatattctt 46815062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 18520899 - 18520943
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18520899 ggaaagttggattcaatgattagattaagtgaagaacatattctt 18520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 32499291 - 32499335
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32499291 ggaaagttggattcaatgattagattaagtgaagaacatattctt 32499335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 32499916 - 32499872
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32499916 ggaaagttggattcaatgattagattaagtgaagaacatattctt 32499872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 36620820 - 36620743
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||| ||||| ||||||||||| |||||||     |||  |||||||||||||||||||||||||||||||||||||    
T  36620820 ggtgtgtgttcacatggaaaaggttaatcattttccat----gga--gttggattcaatgattagattaagtgaagaacatatt 36620743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 36620131 - 36620201
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||||||||||||||| ||||| | |||  |||||||| |||||||||||| |||||||||| ||||||||    
T  36620131 atgggaaaggttaatctttttctatcatgagaaagttgaattcaatgattaaattaagtgaaaaacatatt 36620201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 335 - 370
Target Start/End: Complemental strand, 46012978 - 46012943
Alignment:
Q  335 ttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||||||||||||||||||||||||||||    
T  46012978 ttggattcaatgattagattaagtgaagaacatatt 46012943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 27856216 - 27856162
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggatt 341  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| | |||||||||||    
T  27856216 ggtgtgtgttcacatgggaaaggttaatcatttcccaccatggaaaagttggatt 27856162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 84377 - 84426
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||| |||||||||||| |||||||| |||| || ||||||||    
T  84377 ggtgtgtgttcacatgggaaaggtgaatcctttcccactatgggaaagtt 84426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 26687499 - 26687586
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  26687499 gggtgtgtgttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattctt 26687586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 26957230 - 26957317
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  26957230 gggtgtgtgttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattctt 26957317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 3957512 - 3957586
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3957512 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 3957586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 4928871 - 4928957
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4928871 ggtgtgtgttcacatgggaaaagttaatcctttcccaccatagaaaagttggatttaatgattagattaagtgaagaacatattctt 4928957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 299 - 370
Target Start/End: Complemental strand, 4929580 - 4929509
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  4929580 catgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaatatatt 4929509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 373
Target Start/End: Complemental strand, 8813756 - 8813683
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  8813756 atgggaaaggttaatccttttccatcatgggaaagttggattcaatgattagattaagtaaagaacatattctt 8813683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 21769994 - 21770084
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaa----gttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||    
T  21769994 ggtgtgtgttcatatgggaaaggttaatccttttccaccatgggaaagttggttggattcaatgattagattaagtgaagaacatattctt 21770084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 28076043 - 28075969
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  28076043 catggaaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtgaaaaatatattctt 28075969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 33430055 - 33430128
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33430055 catggaaaaggttaatcctttcctaccat-ggaaagttggattcaatgattagattaagtgaagaacatattctt 33430128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 370
Target Start/End: Complemental strand, 3958216 - 3958137
Alignment:
Q  291 tgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||| ||||||||||||||||||||| ||| ||  |||||||| |||||||| ||||||||||||||||||||||||    
T  3958216 tgtgttcacatgggaaaggttaatcctttcccatcaatggaaagtttgattcaataattagattaagtgaagaacatatt 3958137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 3739749 - 3739663
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||| |||||  |||||||||| | || ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  3739749 ggtgtgtgttcacataggaaaacttaatcctttcctactatgagaaagttggattcaatgattagattaagtgaagaacatattctt 3739663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 5324477 - 5324403
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||| ||||   |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  5324477 catgggaaaggttaattctttcataccatgagaaagttggattcaatgattagattaagtgaagaacatattctt 5324403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 42408011 - 42408078
Alignment:
Q  306 aaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||| ||| |||| || ||||| |||||||||||||||||||||| ||||||||||||||||    
T  42408011 aaggttaatcttttcccactatgggaaaattggattcaatgattagattaaatgaagaacatattctt 42408078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 42408607 - 42408565
Alignment:
Q  331 aaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42408607 aaagttggattcaatgattagattaagtgaagaacatattctt 42408565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 5324304 - 5324368
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattag 351  Q
    ||||||||||| |||||||||| |||||||||| | | ||| |||||||||||||||||||||||    
T  5324304 ggtgtgtgttcacatgggaaagcttaatcctttcctatcatgggaaagttggattcaatgattag 5324368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 13738102 - 13738146
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  13738102 ggaaagttggattcaatgattggattaagtgaagaacatattctt 13738146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 8813078 - 8813135
Alignment:
Q  288 gtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaat 345  Q
    ||||||||||  |||||||||||||||||| | ||||||| |||||||||||||||||    
T  8813078 gtgtgtgttcatatgggaaaggttaatcctctcccaccatgggaaagttggattcaat 8813135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 3739042 - 3739086
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||||||||||||||| || ||||||||    
T  3739042 ggaaagttggattcaatgattagattaagtgaaaaatatattctt 3739086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 26688092 - 26688057
Alignment:
Q  338 gattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||| ||||||||||||||||||||||    
T  26688092 gattcaatgattatattaagtgaagaacatattctt 26688057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 26957823 - 26957788
Alignment:
Q  338 gattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||| ||||||||||||||||||||||    
T  26957823 gattcaatgattatattaagtgaagaacatattctt 26957788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 25075071 - 25075034
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  25075071 catgggaaaggttaatcctttcccaccatgggaaagtt 25075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 25133040 - 25133003
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  25133040 catgggaaaggttaatcctttcccaccatgggaaagtt 25133003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 39148768 - 39148817
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagtt 336  Q
    |||||||||||  ||||||||||| ||| |||||||||||| ||||||||    
T  39148768 ggtgtgtgttcatatgggaaaggtgaattcttttccaccatgggaaagtt 39148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 11998456 - 11998542
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11998456 ggtgtgtgttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 11998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 30116082 - 30115996
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||    
T  30116082 ggtgtgtgttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaatatattctt 30115996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 36848283 - 36848197
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  36848283 ggtgtgtgttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 36848197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 7818486 - 7818560
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7818486 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 7818560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 33114262 - 33114188
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33114262 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 33114188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 43591007 - 43591093
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||    
T  43591007 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaaatgaagaacatattctt 43591093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 43481367 - 43481284
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||| ||||  ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43481367 ggtgtgtgttcacatgaaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 43481284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 16889207 - 16889281
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16889207 catgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 16889281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 35237271 - 35237345
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  35237271 catgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaataacatattctt 35237345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 40907599 - 40907684
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  40907599 ggtgtgtgttcacatgggaaaggttaatcctttcccaccacgggaaagttg-attcaatgattagattaagtgaagaacatattctt 40907684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 44061985 - 44062071
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||| ||||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44061985 ggtgtgtgttcacatgagaaaggttaatactttccaaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 44062071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 39852167 - 39852240
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  39852167 atgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 39852240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 40309568 - 40309500
Alignment:
Q  305 aaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40309568 aaaggttaatcatttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 40309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 7819184 - 7819097
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| |||||||||| |||||| ||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  7819184 gggtgtgtgttcacatgggaaagattaatcttttcccaccatgcgaaagttagattcaatgattagattaagtgaagaacatattctt 7819097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 289 - 372
Target Start/End: Complemental strand, 35237947 - 35237865
Alignment:
Q  289 tgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattct 372  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  35237947 tgtgtgttcacatgggaaaggttaatcctttcccaccatagaaaagtt-gattcaataattagattaagtgaagaacatattct 35237865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 4373686 - 4373772
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||| ||||||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  4373686 ggtgtgtgttcacatgggaaatgttaatcatttcccatcataggaaagttgaattcaatgattatattaagtgaagaacatattctt 4373772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 11999154 - 11999080
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  11999154 catgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagatgaagtgaagaacatattctt 11999080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 16889913 - 16889828
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  16889913 ggtgtgtgttcacatgggaa-ggttaatcatttcccaccatgggaaagttggattcaattattagattaagtgaagaacatattctt 16889828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 43480628 - 43480702
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  43480628 catgggaaaggttaatctttttacaccatgggaaagttggattaaatgattagattaagtgaagaacatattctt 43480702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 373
Target Start/End: Complemental strand, 16880599 - 16880518
Alignment:
Q  292 gtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||| |||||||||| |||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  16880599 gtgttcacatgggaaagattaatcctttcccaccatgtgaaagttagattcaatgattagattaagtgaagaacatattctt 16880518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 38778172 - 38778240
Alignment:
Q  305 aaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38778172 aaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 38778240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 30115386 - 30115453
Alignment:
Q  306 aaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  30115386 aaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 30115453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 39852890 - 39852803
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| |||| |||||||||||||||| ||||||||  |||||| |||||||| |||||||||||||||||| ||||||||    
T  39852890 gggtgtgtgttcacatgagaaaggttaatcctttcccaccataaaaaagttagattcaattattagattaagtgaagaatatattctt 39852803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 44062666 - 44062599
Alignment:
Q  303 ggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  44062666 ggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtggagaatatatt 44062599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 33113587 - 33113661
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  33113587 catgggaaagattaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattctt 33113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 43591690 - 43591616
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||  ||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  43591690 catgggaaaggttaattatttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattctt 43591616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 370
Target Start/End: Complemental strand, 4375065 - 4374995
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||| | |||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  4375065 atgggaaagatgaatcattttccaccatgagaaagttggattcaatgattggattaagtgaagaacatatt 4374995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 10806511 - 10806437
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||| | ||||| |||||||| ||||||||||||| ||||||| ||||||||||||||    
T  10806511 catgggaaaggttaatcttttcctaccatgggaaagtttgattcaatgattaaattaagtaaagaacatattctt 10806437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 16879900 - 16879974
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| ||||||| ||| | | |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  16879900 catgggaaaagttaatcatttcctatcatgagaaagttggattcaatgattagattaagtgaagaacatattctt 16879974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 4374345 - 4374301
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4374345 ggaaagttggattcaatgattagattaagtgaagaacatattctt 4374301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 38778881 - 38778798
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    |||| |||||| |||| |||||||||||| |||  ||||||  |||||||| |||||||||||||||||||||||||| |||||    
T  38778881 ggtgggtgttcacatgagaaaggttaatcatttctcaccatgagaaagttgtattcaatgattagattaagtgaagaatatatt 38778798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 2209032 - 2209092
Alignment:
Q  313 atccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||| |||||||  ||||||| |||||||||||||||||||||||| |||||||||||    
T  2209032 atcctttcccaccatgagaaagttcgattcaatgattagattaagtgaataacatattctt 2209092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 10805990 - 10806034
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  10805990 ggaaagttggattcaatgattagattaaatgaagaacatattctt 10806034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 37533363 - 37533319
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccatagga 331  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||    
T  37533363 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatagga 37533319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 52859875 - 52859788
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||| ||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  52859875 gggtgtgtgttcacatgggaaaggttaatcctttccaaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 52859788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 43368921 - 43368835
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  43368921 ggtgtgtgttcacatgggaaaggttaattctttcccaccatgggaaagttgtattcaatgattagattaagtgaagaacatattctt 43368835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 1403052 - 1403126
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1403052 catggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 1403126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 1403773 - 1403688
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||| ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  1403773 ggtgtgtgttcacataggaaaggttaatcctttcccaccatgggaaagttg-attcaatgattagattaagtgaagaacatattctt 1403688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 7219733 - 7219648
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  7219733 ggtgtgtgttcacatgggaaaggttaatcctttcccatcatgggaaa-ttggattcaatgattagattaagtgaagaacatattctt 7219648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 8560168 - 8560242
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||    
T  8560168 catgggaaaggttaatccttttccaccatgggaatgttggattcaaagattagattaagtgaagaacatattctt 8560242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 8560828 - 8560743
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||    
T  8560828 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatggaaaagttg-attcaatgattagattaagtgaagaacatattctt 8560743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 27797117 - 27797203
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  27797117 ggtgtgtgttcacatggaaaaggttaatcctttcccaccatgggaaggttgaattcaatgattagattaagtgaagaacatattctt 27797203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 42839701 - 42839787
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||| || |||||||| ||||||||||||||||||||||||    
T  42839701 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattctt 42839787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 42839620 - 42839548
Alignment:
Q  301 tgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  42839620 tgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 42839548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 289 - 373
Target Start/End: Original strand, 48843582 - 48843666
Alignment:
Q  289 tgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||| ||||||||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  48843582 tgtgtgttcacatgggaaaggttaatcttttcacaccataggaaagttggattcaatgattatattaagtgaataacatattctt 48843666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 370
Target Start/End: Complemental strand, 42840399 - 42840316
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatatt 370  Q
    ||||||||||  ||||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  42840399 ggtgtgtgtttacatgggaaaggttaatcattttccactatgggaaagttgaattcaatgattagattaagtgaagaacatatt 42840316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 27797810 - 27797736
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||    
T  27797810 catgggaaaggttaatccttttccactatgggaaagttagagtcaatgattagattaagtgaagaacatattctt 27797736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 291 - 373
Target Start/End: Original strand, 49533747 - 49533829
Alignment:
Q  291 tgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||| ||| || |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  49533747 tgtgttcacatagggaaggttaatcctttcccaccacgggaaagttggattcaatgattagattaagtgaagaacatattctt 49533829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 27817078 - 27817006
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattc 371  Q
    |||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  27817078 catgggtaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattc 27817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 6288278 - 6288204
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||  |||||| |  ||||||||||||||||||||||||||||||||||||||||||    
T  6288278 catgggaaaggttaatcctttctcaccatggagaagttggattcaatgattagattaagtgaagaacatattctt 6288204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 42838949 - 42839023
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  42838949 catggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattctt 42839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 49534470 - 49534396
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||| || |||||||||||    
T  49534470 catgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagttaaaaacatattctt 49534396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 300 - 373
Target Start/End: Original strand, 43368203 - 43368276
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||    
T  43368203 atgggaaaggttaatcctttcccaccatgggaatgttagattcaatgattaaattaagtgaagaacatattctt 43368276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 51248570 - 51248483
Alignment:
Q  286 gggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||  |||||||||||||||  ||| ||||||| | |||||| |||||||| |||||||||||||||||||||||||||    
T  51248570 gggtgtgtgttccaatgggaaaggttaattttttcccaccatggaaaagtttgattcaataattagattaagtgaagaacatattctt 51248483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 41563179 - 41563265
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||  |||||||| |||||| |||||| ||||| ||||||||||||||||| |||||||||| |||||||| |||||||    
T  41563179 ggtgtgtgttcatatgggaaatgttaattcttttctaccatgggaaagttggattcaattattagattaaatgaagaacgtattctt 41563265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 48369507 - 48369568
Alignment:
Q  312 aatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  48369507 aatcattttccactataggaaagttggattcaatgattggattaagtgaagaacatattctt 48369568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 7782765 - 7782691
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||  |||||||| | ||||| ||||||||||||||||||||| ||| |||||||||||||||||||    
T  7782765 catgggaaaggccaatcctttcctaccatgggaaagttggattcaatgattggatcaagtgaagaacatattctt 7782691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 48844006 - 48843962
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48844006 ggaaagttggattcaatgattagattaagtgaagaacatattctt 48843962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 373
Target Start/End: Complemental strand, 27934358 - 27934295
Alignment:
Q  309 gttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||| |||||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  27934358 gttaattcttttccaacatgggaaagttggat-caatgattagattaagagaagaacatattctt 27934295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 37725423 - 37725465
Alignment:
Q  331 aaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  37725423 aaagttggattcaatcattagattaagtgaagaacatattctt 37725465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 373
Target Start/End: Complemental strand, 41563833 - 41563792
Alignment:
Q  332 aagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  41563833 aagttggattcaattattagattaagtgaagaacatattctt 41563792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 7219050 - 7219094
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||    
T  7219050 ggaaagttggattcaatgattagattaaatgaagaatatattctt 7219094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 6287672 - 6287706
Alignment:
Q  339 attcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||||||||    
T  6287672 attcaatgattagattaagtgaagaacatattctt 6287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 51247876 - 51247914
Alignment:
Q  335 ttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  51247876 ttggattcaatgattagattaagtgaagaatatattctt 51247914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 371
Target Start/End: Complemental strand, 37725713 - 37725672
Alignment:
Q  330 gaaagttggattcaatgattagattaagtgaagaacatattc 371  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  37725713 gaaaattggattcaatgattagattaagtgaagaatatattc 37725672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 52859191 - 52859235
Alignment:
Q  329 ggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||    
T  52859191 ggaaagttagattcaatgattagattaaatgaataacatattctt 52859235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 43352861 - 43352827
Alignment:
Q  300 atgggaaaggttaatccttttccaccataggaaag 334  Q
    ||||||||||| |||||||||||||||||||||||    
T  43352861 atgggaaaggtgaatccttttccaccataggaaag 43352827  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 29152381 - 29152348
Alignment:
Q  303 ggaaaggttaatccttttccaccataggaaagtt 336  Q
    ||||||||||||| ||||||||||||||||||||    
T  29152381 ggaaaggttaatcattttccaccataggaaagtt 29152348  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 48620409 - 48620368
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccata 328  Q
    ||||||||||| |||||||||||| |||||||| ||||||||    
T  48620409 ggtgtgtgttcacatgggaaaggtgaatcctttcccaccata 48620368  T

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Target: scaffold0229 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 15307 - 15233
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15307 catggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 15233  T

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Target: scaffold0007 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 11278 - 11351
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11278 catgggaaaggttaatc-ttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 11351  T

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Target: scaffold1095 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 1485 - 1571
Alignment:
Q  287 ggtgtgtgttcgcatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||||||||| |||||||||| |||||| |||  |||||| | ||||||||||||||||||||||||||||||| |||||||||||    
T  1485 ggtgtgtgttcacatgggaaagcttaatcatttcgcaccatggaaaagttggattcaatgattagattaagtgaataacatattctt 1571  T

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Target: scaffold0368 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 11858 - 11784
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 373  Q
    ||||| ||||||||||||||| ||||||| |||||||| || |||||||| ||||||||||||||||||||||||    
T  11858 catggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattctt 11784  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 90627 - 90664
Alignment:
Q  299 catgggaaaggttaatccttttccaccataggaaagtt 336  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  90627 catgggaaaggtgaatcattttccaccataggaaagtt 90664  T

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