View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17051_high_24 (Length: 239)
Name: NF17051_high_24
Description: NF17051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17051_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 12884684 - 12884884
Alignment:
| Q |
11 |
gaagaatatagcttaaagctagagagagaaaatgaattatatggagcagaaagatgcttccttcttttcatatactttcctgccaaaaaacatgaataac |
110 |
Q |
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| T |
12884684 |
gaagaatatagcttaaagctagagagagaaaatgaattatatggagcagaaagatgcttccttcttttcatatactttcctgccaaaaaacatgaataac |
12884783 |
T |
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| Q |
111 |
acacagttaccatgttaccatatgtaagaagaaaagatttgtagaaatattgacaaacagatgaaccgatcaaagaaatcaaacctttacaaatatgcat |
210 |
Q |
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| T |
12884784 |
acaca--------gttaccatatgtaagaagaaaagatttgtagaaatattgacaaacagatgaaccga--aaacaaatcaaacctttacaaatatgcat |
12884873 |
T |
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| Q |
211 |
gtgtaagttta |
221 |
Q |
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| T |
12884874 |
gtgtaagttta |
12884884 |
T |
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