View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17051_high_8 (Length: 478)
Name: NF17051_high_8
Description: NF17051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17051_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 33 - 478
Target Start/End: Original strand, 36528854 - 36529299
Alignment:
| Q |
33 |
atctcattagtttggacaaaatttggttttcttttgtcatattgtggtcaaatagcaattaaattgagtattcttttcatgatgtatgctcgcaagcatg |
132 |
Q |
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| T |
36528854 |
atctcattagtttggacacaatttggttttcttttgtcatattgtggtcaaatagcaattaaattgagtattcttttcatgatgtatgctcgcaagcatg |
36528953 |
T |
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| Q |
133 |
tgaccttatggtaggtgcaagcatgaatatctttttgtctatacagatttgttaagcattttaatctcactgaacatttttgttcacagataatcccatt |
232 |
Q |
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| T |
36528954 |
tgaccttatggtaggtgcaagcatgaatatctttttgtctatacagatttgttaagcattttaatctcactggacatttttgttgacaaataatcccatt |
36529053 |
T |
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| Q |
233 |
ggacatgtttttggtttttatttgtcataaagtgaatcaaaagtgcatgtaaacctaaaataaatcaaaccatcatacttcaaatttctcagctttttta |
332 |
Q |
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| T |
36529054 |
ggacatgtttttggtttttatttgtcataaagtgaatcaaaagtgcatgtaaacctaaaataaatcaaaccgttatacttcaaatttctcagctttttta |
36529153 |
T |
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| Q |
333 |
ataggatataggatgttatggttatggacaccagtagattttgctctactatgattttacttacattcataaaatgataaagctcattttttgggggagt |
432 |
Q |
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| T |
36529154 |
ataggatataggatgttatggttatggacaccagtagattttgctctactatgattttacttacattcataaaatgataaagctcattttttgggggagt |
36529253 |
T |
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| Q |
433 |
gatgggctagataaacttccaaagagatgaactacgaaatcaatgt |
478 |
Q |
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| T |
36529254 |
gatgggctagataaacttccaaagagatgaactacgaaatcaatgt |
36529299 |
T |
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