View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17051_low_15 (Length: 384)
Name: NF17051_low_15
Description: NF17051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17051_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 3 - 369
Target Start/End: Original strand, 45328171 - 45328537
Alignment:
| Q |
3 |
caccaagtgctaaaccaaccttcaacctaattctcatcctaccttttgcaacatcaactatataatccctagcagtaaacccttctctagcacccatttg |
102 |
Q |
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| T |
45328171 |
caccaagtgctaaaccaaccttcaacctaattctcatcctaccttttgcaacatcaactatataatccctagcagtaaacccttctctagcacccatttg |
45328270 |
T |
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| Q |
103 |
aagccctgttaaaatcgtattctcttgcaaatccaaaacaaaattaacaagtccacttaagagtatatctatgaatccaaaacccactaaaacaaaaaca |
202 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328271 |
aagcccggttaaaatcgtattctcttgcaaatccaaaacaaaattaacaagtccacttaagagtatatctatgaatccaaaacccactaaaacaaaaaca |
45328370 |
T |
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| Q |
203 |
caagcaaagagtttagtcattggtgttaaaggagctatgtctccataaccaattgtacacatggtgactatacaaaaataaagagcatcaacaacagggt |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328371 |
caagcaaagagtttagtcattggtgttaaaggagctatgtctccataaccaattgtacacatggtgactatacaaaaataaagagcatcaacaacagggt |
45328470 |
T |
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| Q |
303 |
gagtttcaatgccagagaaattttttgtgttgaaagagtatattatgacaccgacagagaggtatat |
369 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45328471 |
gagtttcaatgccagagaaattttttgtgttgaaagagtatattatgacaccgacagagaggtatat |
45328537 |
T |
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