View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17051_low_21 (Length: 313)
Name: NF17051_low_21
Description: NF17051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17051_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 16 - 289
Target Start/End: Complemental strand, 38938998 - 38938725
Alignment:
| Q |
16 |
ataacaccaaaatgataaattcaaccatacaaatgaacttctgtaagaatatctagcttggaattccttacaaaacaatcataatcacaccattaactaa |
115 |
Q |
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| T |
38938998 |
ataacaccaaaatgataaattcaaccatacaaatgaacttctgtaagaatatctagcttggaattccttacaaaacaatcataatcacaccattaactaa |
38938899 |
T |
|
| Q |
116 |
tgggccacaccataagaactttgctttgacatttctgctttcatgaacttaaactttgtgtttaacgaattcctgaagtttaaaacagtaacggnnnnnn |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38938898 |
tgggccacaccataagaactttgctttgacatttctgctttcatgaacttaaactttgtgtttaacgaattcctgaagtttaaaacagtaacggtttttt |
38938799 |
T |
|
| Q |
216 |
ncttctatatataagagattaaaacattagcataaaggccatatacactagagacatggcaaacattcaaaagg |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38938798 |
tcttctatatataagagattaaaacattagcataaaggccatatacactagagacatggcaaacattcaaaagg |
38938725 |
T |
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