View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17051_low_7 (Length: 487)

Name: NF17051_low_7
Description: NF17051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17051_low_7
NF17051_low_7
[»] chr4 (11 HSPs)
chr4 (1-467)||(35179397-35179857)
chr4 (67-193)||(22542437-22542562)
chr4 (64-205)||(39471201-39471341)
chr4 (64-205)||(43771170-43771310)
chr4 (10-45)||(4821073-4821108)
chr4 (55-109)||(19447271-19447325)
chr4 (64-109)||(8109095-8109140)
chr4 (141-205)||(2187885-2187949)
chr4 (11-39)||(9048828-9048856)
chr4 (64-100)||(11895186-11895222)
chr4 (141-192)||(13069997-13070049)
[»] chr3 (9 HSPs)
chr3 (123-205)||(37776759-37776839)
chr3 (67-205)||(41451894-41452031)
chr3 (67-205)||(24734749-24734886)
chr3 (64-205)||(28529297-28529435)
chr3 (64-210)||(48351475-48351620)
chr3 (141-189)||(29755560-29755609)
chr3 (9-38)||(46220807-46220836)
chr3 (69-109)||(27243185-27243225)
chr3 (9-37)||(52923032-52923060)
[»] chr7 (16 HSPs)
chr7 (64-194)||(25686831-25686960)
chr7 (11-45)||(46244169-46244203)
chr7 (64-193)||(6442221-6442349)
chr7 (141-205)||(19840956-19841021)
chr7 (64-205)||(22189983-22190123)
chr7 (64-95)||(11824222-11824253)
chr7 (67-141)||(27949379-27949454)
chr7 (66-109)||(44350800-44350843)
chr7 (141-202)||(22786198-22786260)
chr7 (11-45)||(43369671-43369705)
chr7 (141-205)||(26703511-26703576)
chr7 (153-194)||(41508359-41508400)
chr7 (142-205)||(11692223-11692287)
chr7 (177-205)||(12271030-12271058)
chr7 (141-204)||(17354598-17354662)
chr7 (10-38)||(24069310-24069338)
[»] chr2 (6 HSPs)
chr2 (64-205)||(6980116-6980256)
chr2 (11-48)||(18695199-18695236)
chr2 (67-105)||(6315802-6315840)
chr2 (11-44)||(17994648-17994681)
chr2 (11-44)||(29279488-29279521)
chr2 (11-44)||(37876524-37876557)
[»] chr8 (5 HSPs)
chr8 (8-60)||(12169323-12169375)
chr8 (8-60)||(12413751-12413803)
chr8 (8-38)||(41684529-41684559)
chr8 (64-109)||(16983533-16983578)
chr8 (5-37)||(25190974-25191006)
[»] scaffold0136 (1 HSPs)
scaffold0136 (11-45)||(34679-34713)
[»] chr6 (5 HSPs)
chr6 (68-205)||(34905380-34905516)
chr6 (141-189)||(12785010-12785059)
chr6 (9-38)||(30608430-30608459)
chr6 (10-47)||(33184862-33184899)
chr6 (8-37)||(34018707-34018736)
[»] chr1 (7 HSPs)
chr1 (64-109)||(39974196-39974241)
chr1 (10-54)||(28053633-28053677)
chr1 (75-205)||(32211791-32211920)
chr1 (151-205)||(50539168-50539222)
chr1 (11-44)||(19052231-19052264)
chr1 (141-205)||(28218119-28218184)
chr1 (67-95)||(32848734-32848762)
[»] scaffold0018 (1 HSPs)
scaffold0018 (64-203)||(27858-27996)
[»] chr5 (7 HSPs)
chr5 (11-45)||(19100536-19100570)
chr5 (141-205)||(5413808-5413873)
chr5 (69-110)||(26072106-26072147)
chr5 (141-205)||(42224662-42224727)
chr5 (12-44)||(6217036-6217068)
chr5 (10-46)||(11875523-11875559)
chr5 (10-46)||(24549512-24549548)
[»] scaffold0262 (1 HSPs)
scaffold0262 (9-38)||(1734-1763)
[»] scaffold0888 (1 HSPs)
scaffold0888 (10-38)||(1594-1622)


Alignment Details
Target: chr4 (Bit Score: 351; Significance: 0; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 467
Target Start/End: Complemental strand, 35179857 - 35179397
Alignment:
Q  1 attcaatagtaaaatgcctacaaataatatgataaaattaaagtggtcataatatccatgaatagtaatgctaacaacactctcttttgaacactatttt 100  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||    
T  35179857 attcaatagtaaagtggctacaaataatatgataaaattaaagtggtcataatatccatgaagagtaatgctaacaacactctcttttga-cactatctt 35179759  T
Q  101 taatactcatcctattatta-tataaatcattgtaggtctactacactttgaaattgaacccacataaagtagtaaaacatacattgatttcatctgata 199  Q
    ||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  35179758 taatattcactctattattagtataaatcattgtaggtctactacactttgaaattgaacccacgtaaagtagtgaaacatacattgatttcatccgata 35179659  T
Q  200 aaagagagtgttaaaaagtgattgatgtcagtattcctctatccatgaatatatgtaattacctatagtttcttcatannnnnnnaaagacacaacaaat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  35179658 aaagagagtgttaaaaagtgattgatgtcagtattcctctatccatgaatatatgtaattacctatagtttcttcatatttttttaaagacacaacaaat 35179559  T
Q  300 taacacataataatattgatacatttcattcattcgagctaacaccaatttatcacactcatttatgtggatttccgttaaactatgttacccataacga 399  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  35179558 taacacataataatattgatacat----ttcattcgagctaacaccaatttttcacactcatttatgtggatttcgattaaactatgttacccataacga 35179463  T
Q  400 atttcatccgcatatatacaagtatttttgccctccttacatgggaggtagccgccatggtagaatat 467  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35179462 atttcatccgc--atatacaagtatttttgccctccttacatgggaggtagccgccatggtagaatat 35179397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 22542562 - 22542437
Alignment:
Q  67 aatgctaacaacactctcttttgaacactatttttaatactcatcctattatta-tataaatcattgtaggtctactacactttg-aaattgaacccaca 164  Q
    ||||||||||||||| ||||||||||||| |||||||||||||  || |||||| | ||||||||||| ||   ||||  ||||| ||||||||||||||    
T  22542562 aatgctaacaacactatcttttgaacactctttttaatactcactctcttattagtttaaatcattgtggg---actattctttgaaaattgaacccaca 22542466  T
Q  165 taaagtagtaaaacatacattgatttcat 193  Q
     ||||| ||  ||||||| ||||||||||    
T  22542465 caaagtggtggaacatactttgatttcat 22542437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 39471341 - 39471201
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttgaa-attgaaccc 161  Q
    ||||||||||||||||||||||||| |||| | | | |||||||||  || |||||  | ||||||||||| |||   |||||||||||| ||||||||     
T  39471341 agtaatgctaacaacactctcttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggt---ctacactttgaagattgaacca 39471245  T
Q  162 acataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||| ||||| ||   ||||||||||||||||||| |||||||||    
T  39471244 acacaaagtggtgggacatacattgatttcatctaataaaagag 39471201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 43771310 - 43771170
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttg-aaattgaaccc 161  Q
    |||||||||| |||| |||||||||||||||  | |||||||||||  || |||||  | ||||||||||| |||   |||||||||| |||||||||||    
T  43771310 agtaatgctagcaacgctctcttttgaacaccctctttaatactcactctcttattggtttaaatcattgtgggt---ctacactttgaaaattgaaccc 43771214  T
Q  162 acataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||| | ||| ||   ||||||||||||||||||  |||||||||    
T  43771213 acacagagtggtgggacatacattgatttcatccaataaaagag 43771170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 4821108 - 4821073
Alignment:
Q  10 taaaatgcctacaaataatatgataaaattaaagtg 45  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4821108 taaaatgtctacaaataatatgataaaattaaagtg 4821073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 19447325 - 19447271
Alignment:
Q  55 tccatgaatagtaatgctaacaacactctcttttgaacactatttttaatactca 109  Q
    ||||| || |||| ||||| ||||||||||||||||||||| | |||||||||||    
T  19447325 tccatcaagagtagtgctagcaacactctcttttgaacactctctttaatactca 19447271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 8109140 - 8109095
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactca 109  Q
    |||||||||| ||||||||||||||||||||| | | |||||||||    
T  8109140 agtaatgctagcaacactctcttttgaacactctctctaatactca 8109095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 2187885 - 2187949
Alignment:
Q  141 ctacactttgaaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||||||||||||| |||||||||||||||| ||   |||| ||||||||||| |  |||||||||    
T  2187885 ctacactttgaaaatgaacccacataaagtggtgggacattcattgatttcacccaataaaagag 2187949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 9048856 - 9048828
Alignment:
Q  11 aaaatgcctacaaataatatgataaaatt 39  Q
    |||||||||||||||||||||||||||||    
T  9048856 aaaatgcctacaaataatatgataaaatt 9048828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 11895222 - 11895186
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttt 100  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  11895222 agtaatgctagcaacactctcttttgaacactttttt 11895186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 13070049 - 13069997
Alignment:
Q  141 ctacactttgaaattg-aacccacataaagtagtaaaacatacattgatttca 192  Q
    ||||||||||||| || |||||||||||||| ||  |||||||||||||||||    
T  13070049 ctacactttgaaaatggaacccacataaagtggtggaacatacattgatttca 13069997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 37776759 - 37776839
Alignment:
Q  123 taaatcattgtaggtctactacactttgaaa-ttgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    |||||||||||||||||||   ||||||||| ||||||||||| ||||| |||  ||||||||||||||||||| |||||||||    
T  37776759 taaatcattgtaggtctac---actttgaaaattgaacccacacaaagtggtaggacatacattgatttcatctaataaaagag 37776839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 41451894 - 41452031
Alignment:
Q  67 aatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttg-aaattgaacccaca 164  Q
    ||||||| ||||||||||||||||||||| | | |||||||||  || |||||  | ||||||||||| ||||||||   ||||| ||||||||||||||    
T  41451894 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctact---ctttgaaaattgaacccaca 41451990  T
Q  165 taaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
     ||||| ||   |||||| |||||||||||  |||||||||    
T  41451991 caaagtggtgggacatactttgatttcatccaataaaagag 41452031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 24734886 - 24734749
Alignment:
Q  67 aatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttg-aaattgaacccaca 164  Q
    ||||||| ||||||||||||||||||||| | | |||||||||  || |||||  | ||||||||||| || |||||   ||||| ||||||||||||||    
T  24734886 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggcctact---ctttgaaaattgaacccaca 24734790  T
Q  165 taaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
     ||||| ||   |||||| |||||||||||  |||||||||    
T  24734789 caaagtggtgggacatactttgatttcatccaataaaagag 24734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 28529435 - 28529297
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttg-aaattgaaccc 161  Q
    ||||||| |||||||||||||||||||||||  | | |||||||||  || |||||  | ||||||||||| |||   |||||||||| |||||||||||    
T  28529435 agtaatgttaacaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggt---ctacactttgaaaattgaaccc 28529339  T
Q  162 acataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||  | ||| ||   ||||||||||||||||||  |||||||||    
T  28529338 ac--acagtggtgggacatacattgatttcatccaataaaagag 28529297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 48351620 - 48351475
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttgaaa-ttgaaccc 161  Q
    |||||||||||| ||| ||||||||||||| | | | |||||||| | || ||||| || ||||||||| | | | |||   ||||||||| ||||||||    
T  48351620 agtaatgctaacgacattctcttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatac---actttgaaaattgaaccc 48351524  T
Q  162 acataaagtagtaaaacatacattgatttcatctgataaaagagagtgt 210  Q
    ||| |||||||| | ||||| |||||||| |||  ||||||||| ||||    
T  48351523 acacaaagtagtgagacatatattgattttatccaataaaagagtgtgt 48351475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 29755609 - 29755560
Alignment:
Q  141 ctacactttgaaa-ttgaacccacataaagtagtaaaacatacattgatt 189  Q
    ||||||||||||| ||||||||||| |||||||| ||||||| |||||||    
T  29755609 ctacactttgaaaattgaacccacacaaagtagtgaaacatatattgatt 29755560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 46220836 - 46220807
Alignment:
Q  9 gtaaaatgcctacaaataatatgataaaat 38  Q
    ||||||||||||||||||||||||||||||    
T  46220836 gtaaaatgcctacaaataatatgataaaat 46220807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 27243225 - 27243185
Alignment:
Q  69 tgctaacaacactctcttttgaacactatttttaatactca 109  Q
    ||||| ||||||||||||||||||||| ||| |||||||||    
T  27243225 tgctagcaacactctcttttgaacactctttctaatactca 27243185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 52923032 - 52923060
Alignment:
Q  9 gtaaaatgcctacaaataatatgataaaa 37  Q
    |||||||||||||||||||||||||||||    
T  52923032 gtaaaatgcctacaaataatatgataaaa 52923060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 194
Target Start/End: Original strand, 25686831 - 25686960
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttg-aaattgaaccc 161  Q
    ||||||| || ||||||||||||||||||| | ||| ||||||||||  | |||||  | ||||||||||| |||   |||||||||| |||||||||||    
T  25686831 agtaatgttagcaacactctcttttgaacattctttctaatactcattatcttattggtttaaatcattgtgggt---ctacactttgaaaattgaaccc 25686927  T
Q  162 acataaagtagtaaaacatacattgatttcatc 194  Q
    | | ||||| |||  ||||||||||||||||||    
T  25686928 ataaaaagtggtatgacatacattgatttcatc 25686960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 46244169 - 46244203
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagtg 45  Q
    |||||||||||||||||||||||||||||||||||    
T  46244169 aaaatgcctacaaataatatgataaaattaaagtg 46244203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 6442349 - 6442221
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttg-aaattgaaccc 161  Q
    ||||||| || ||||||| ||||||||||||||| |||||||||||  || |||||  | ||||||||||| |||   |||||||||| |||||||| ||    
T  6442349 agtaatgttagcaacactttcttttgaacactatctttaatactcactcttttattggtttaaatcattgtgggt---ctacactttgaaaattgaatcc 6442253  T
Q  162 acataaagtagtaaaacatacattgatttcat 193  Q
     || ||| | ||  ||||||||||||||||||    
T  6442252 ccacaaaatggtggaacatacattgatttcat 6442221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 19840956 - 19841021
Alignment:
Q  141 ctacactttg-aaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    |||||||||| |||| ||||||||||||||| |||| |||||||||||||||| |  |||||||||    
T  19840956 ctacactttggaaatggaacccacataaagtggtaagacatacattgatttcaaccaataaaagag 19841021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 22190123 - 22189983
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacactttg-aaattgaaccc 161  Q
    |||||||||||||||||||||||||||||||  | | |||||||||  |  |||||  | ||||||||||  |||   |||||||||| |||||||||||    
T  22190123 agtaatgctaacaacactctcttttgaacaccctctctaatactcactcgtttattggtttaaatcattgcgggt---ctacactttgaaaattgaaccc 22190027  T
Q  162 acataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||| ||||| ||    |||||||||||||||||  |||||||||    
T  22190026 acacaaagtggtgggccatacattgatttcatccaataaaagag 22189983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 95
Target Start/End: Complemental strand, 11824253 - 11824222
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacact 95  Q
    ||||||||||||||||||||||||||||||||    
T  11824253 agtaatgctaacaacactctcttttgaacact 11824222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 27949454 - 27949379
Alignment:
Q  67 aatgctaacaacactctcttttgaacactatttttaatactcatcctattatta-tataaatcattgtaggtctac 141  Q
    ||||||| ||||||||||||||||||||| | | |||||||||  || |||||| | ||||||||||| |||||||    
T  27949454 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattagtttaaatcattgtgggtctac 27949379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 44350800 - 44350843
Alignment:
Q  66 taatgctaacaacactctcttttgaacactatttttaatactca 109  Q
    ||||||||||||||||||||||||||||| || | |||||||||    
T  44350800 taatgctaacaacactctcttttgaacaccatctctaatactca 44350843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 22786260 - 22786198
Alignment:
Q  141 ctacactttg-aaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaa 202  Q
    |||||||||| |||| ||||||||||||||| || | |||||||||||||||| || ||||||    
T  22786260 ctacactttggaaatggaacccacataaagtggtgagacatacattgatttcacctaataaaa 22786198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 43369671 - 43369705
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagtg 45  Q
    |||||||||| ||||||||||||||||||||||||    
T  43369671 aaaatgcctataaataatatgataaaattaaagtg 43369705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 26703511 - 26703576
Alignment:
Q  141 ctacacttt-gaaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||||||||| ||||| ||||||||||||||| || | |||||||||||||||| |  |||||||||    
T  26703511 ctacactttagaaatggaacccacataaagtggtgagacatacattgatttcacccaataaaagag 26703576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 41508359 - 41508400
Alignment:
Q  153 attgaacccacataaagtagtaaaacatacattgatttcatc 194  Q
    |||||||||| |||||||||| ||| ||||||||||||||||    
T  41508359 attgaacccatataaagtagtgaaatatacattgatttcatc 41508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 11692287 - 11692223
Alignment:
Q  142 tacactttgaaa-ttgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    |||||||||||| ||||||| ||| ||||| |||  ||||||||||||||||||  |||||||||    
T  11692287 tacactttgaaaattgaacctacacaaagtggtaggacatacattgatttcatccaataaaagag 11692223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 12271058 - 12271030
Alignment:
Q  177 acatacattgatttcatctgataaaagag 205  Q
    |||||||||||||||||||||||||||||    
T  12271058 acatacattgatttcatctgataaaagag 12271030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 17354598 - 17354662
Alignment:
Q  141 ctacactttg-aaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaaga 204  Q
    |||||||||| |||| ||||||||||||||| ||   ||||||||||||||||||  ||||||||    
T  17354598 ctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaaga 17354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 24069310 - 24069338
Alignment:
Q  10 taaaatgcctacaaataatatgataaaat 38  Q
    |||||||||||||||||||||||||||||    
T  24069310 taaaatgcctacaaataatatgataaaat 24069338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 6980116 - 6980256
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattattatat-aaatcattgtaggtctactacactttgaaa-ttgaaccc 161  Q
    |||||||||  ||||||||||||||||||||| | | |||||||||  || ||||||  | |||||||||| ||||||    ||||||||| |||||| |    
T  6980116 agtaatgcttgcaacactctcttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctat---actttgaaaattgaactc 6980212  T
Q  162 acataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||| ||||| ||| ||||||| |||||||||||  |||||||||    
T  6980213 acacaaagtggtagaacataccttgatttcatccaataaaagag 6980256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 18695236 - 18695199
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagtggtc 48  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18695236 aaaatgcctataaataatatgataaaattaaagtggtc 18695199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 6315840 - 6315802
Alignment:
Q  67 aatgctaacaacactctcttttgaacactatttttaata 105  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  6315840 aatgctaacaacactctcttttgagcactctttttaata 6315802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 17994648 - 17994681
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagt 44  Q
    ||||||||||||||||||||||||||||| ||||    
T  17994648 aaaatgcctacaaataatatgataaaatttaagt 17994681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 29279488 - 29279521
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagt 44  Q
    ||||||||||||||||||||||||||||| ||||    
T  29279488 aaaatgcctacaaataatatgataaaatttaagt 29279521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 37876524 - 37876557
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagt 44  Q
    ||||||||||||||||||||||||||||| ||||    
T  37876524 aaaatgcctacaaataatatgataaaatttaagt 37876557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 12169323 - 12169375
Alignment:
Q  8 agtaaaatgcctacaaataatatgataaaattaaagtggtcataatatccatg 60  Q
    |||||||||| ||||||||||||||||||||||||| | ||| ||||||||||    
T  12169323 agtaaaatgcatacaaataatatgataaaattaaagcgatcagaatatccatg 12169375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 12413751 - 12413803
Alignment:
Q  8 agtaaaatgcctacaaataatatgataaaattaaagtggtcataatatccatg 60  Q
    |||||||||| ||||||||||||||||||||||||| | ||| ||||||||||    
T  12413751 agtaaaatgcatacaaataatatgataaaattaaagcgatcagaatatccatg 12413803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 38
Target Start/End: Complemental strand, 41684559 - 41684529
Alignment:
Q  8 agtaaaatgcctacaaataatatgataaaat 38  Q
    |||||||||||||||||||||||||||||||    
T  41684559 agtaaaatgcctacaaataatatgataaaat 41684529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 16983578 - 16983533
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactca 109  Q
    |||||||||| ||||||||||||||||||||| | | |||||||||    
T  16983578 agtaatgctagcaacactctcttttgaacactctctctaatactca 16983533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 25190974 - 25191006
Alignment:
Q  5 aatagtaaaatgcctacaaataatatgataaaa 37  Q
    ||||| |||||||||||||||||||||||||||    
T  25190974 aatagaaaaatgcctacaaataatatgataaaa 25191006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 34679 - 34713
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagtg 45  Q
    |||||||||||||||||||||||||||||||||||    
T  34679 aaaatgcctacaaataatatgataaaattaaagtg 34713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 34905516 - 34905380
Alignment:
Q  68 atgctaacaacactctcttttgaacactatttttaatactcatcctattatta-tataaatcattgtaggtctactacactttgaaa-ttgaacccacat 165  Q
    |||||| ||||||||||||||||||||  | | |||||||||  || |||||  | ||||||||||| |||||||   ||||||||| ||||||||| |     
T  34905516 atgctagcaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctac---actttgaaaattgaacccaaac 34905420  T
Q  166 aaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||||| ||   ||||||||||||||||||  |||||||||    
T  34905419 aaagtggtgggacatacattgatttcatccaataaaagag 34905380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 12785010 - 12785059
Alignment:
Q  141 ctacactttgaaa-ttgaacccacataaagtagtaaaacatacattgatt 189  Q
    ||||||||||||| ||||||  |||||||||||||| |||||||||||||    
T  12785010 ctacactttgaaaattgaactaacataaagtagtaagacatacattgatt 12785059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 30608430 - 30608459
Alignment:
Q  9 gtaaaatgcctacaaataatatgataaaat 38  Q
    ||||||||||||||||||||||||||||||    
T  30608430 gtaaaatgcctacaaataatatgataaaat 30608459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 33184899 - 33184862
Alignment:
Q  10 taaaatgcctacaaataatatgataaaattaaagtggt 47  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  33184899 taaaatgcctacgaataatatgataaatttaaagtggt 33184862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 34018736 - 34018707
Alignment:
Q  8 agtaaaatgcctacaaataatatgataaaa 37  Q
    ||||||||||||||||||||||||||||||    
T  34018736 agtaaaatgcctacaaataatatgataaaa 34018707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000007; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 39974196 - 39974241
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactca 109  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||    
T  39974196 agtaatgctaacaacactctcttttgaacattctttctaatactca 39974241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 28053633 - 28053677
Alignment:
Q  10 taaaatgcctacaaataatatgataaaattaaagtggtcataata 54  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||    
T  28053633 taaaatgcctacaaataatatgataaaatcaaagtgatcagaata 28053677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 32211791 - 32211920
Alignment:
Q  75 caacactctcttttgaacactatttttaatactcatcctattatta-tataaatcattgtaggtctactacactttgaaattgaacccacataaagtagt 173  Q
    |||||||||||||| |||||| | ||||||  |||  || |||||  | ||||||||||| ||||||| || |||  ||||||||| |||| ||||||||    
T  32211791 caacactctcttttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctac-ac-cttaaaaattgaactcacacaaagtagt 32211888  T
Q  174 aaaacatacattgatttcatctgataaaagag 205  Q
       ||||||||||||||||||| |||||||||    
T  32211889 tggacatacattgatttcatctaataaaagag 32211920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 50539222 - 50539168
Alignment:
Q  151 aaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    |||||||||||||||||||| ||  ||||||| |||||||||||  |||||||||    
T  50539222 aaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagag 50539168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 19052231 - 19052264
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagt 44  Q
    ||||||| ||||||||||||||||||||||||||    
T  19052231 aaaatgcatacaaataatatgataaaattaaagt 19052264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 28218119 - 28218184
Alignment:
Q  141 ctacactttgaaa-ttgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    ||||||||||||| ||||| ||||| ||||| || | ||||||||||||||||||  |||||||||    
T  28218119 ctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaaagag 28218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 95
Target Start/End: Complemental strand, 32848762 - 32848734
Alignment:
Q  67 aatgctaacaacactctcttttgaacact 95  Q
    |||||||||||||||||||||||||||||    
T  32848762 aatgctaacaacactctcttttgaacact 32848734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 27996 - 27858
Alignment:
Q  64 agtaatgctaacaacactctcttttgaacactatttttaatactcatcctattatt-atataaatcattgtaggtctactacacttt-gaaattgaaccc 161  Q
    |||| ||||| |||||| |||||||||||||| | |||||||||||  || |||||  | ||||||||||| |||   ||||||||| ||||| ||||||    
T  27996 agtagtgctagcaacaccctcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggt---ctacactttggaaatagaaccc 27900  T
Q  162 acataaagtagtaaaacatacattgatttcatctgataaaag 203  Q
    ||| ||||| ||   ||||||||||||| ||||  |||||||    
T  27899 acacaaagtggtgggacatacattgattccatccaataaaag 27858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 45
Target Start/End: Original strand, 19100536 - 19100570
Alignment:
Q  11 aaaatgcctacaaataatatgataaaattaaagtg 45  Q
    |||||| ||||||||||||||||||||||||||||    
T  19100536 aaaatgtctacaaataatatgataaaattaaagtg 19100570  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 5413808 - 5413873
Alignment:
Q  141 ctacactttg-aaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    |||||||||| |||||||||||||| ||||| ||   ||||||||||||||||||  |||||||||    
T  5413808 ctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaaagag 5413873  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 26072106 - 26072147
Alignment:
Q  69 tgctaacaacactctcttttgaacactatttttaatactcat 110  Q
    |||||||||||||||||||||| |||| ||| ||||||||||    
T  26072106 tgctaacaacactctcttttgagcactctttctaatactcat 26072147  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 42224662 - 42224727
Alignment:
Q  141 ctacactttg-aaattgaacccacataaagtagtaaaacatacattgatttcatctgataaaagag 205  Q
    |||||||||| |||| ||||||||||||||| ||   |||||||||||||||| || |||||||||    
T  42224662 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaagag 42224727  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 6217068 - 6217036
Alignment:
Q  12 aaatgcctacaaataatatgataaaattaaagt 44  Q
    |||||||||||||||||||||||||||| ||||    
T  6217068 aaatgcctacaaataatatgataaaatttaagt 6217036  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 11875559 - 11875523
Alignment:
Q  10 taaaatgcctacaaataatatgataaaattaaagtgg 46  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  11875559 taaaatgcctataaataatatgataaaattgaagtgg 11875523  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 24549548 - 24549512
Alignment:
Q  10 taaaatgcctacaaataatatgataaaattaaagtgg 46  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  24549548 taaaatgcctacatataatatgataaaattaacgtgg 24549512  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 1734 - 1763
Alignment:
Q  9 gtaaaatgcctacaaataatatgataaaat 38  Q
    ||||||||||||||||||||||||||||||    
T  1734 gtaaaatgcctacaaataatatgataaaat 1763  T

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Target: scaffold0888 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 38
Target Start/End: Original strand, 1594 - 1622
Alignment:
Q  10 taaaatgcctacaaataatatgataaaat 38  Q
    |||||||||||||||||||||||||||||    
T  1594 taaaatgcctacaaataatatgataaaat 1622  T

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