View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17052_high_22 (Length: 226)
Name: NF17052_high_22
Description: NF17052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17052_high_22 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 35695287 - 35695092
Alignment:
| Q |
19 |
tcttgctcttcctaccttcttctgaaccaatttccaattacaacaaattagtatacaaaacatgctcaactcaaaccttcaaccatcaatcttattctca |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35695287 |
tcttgctcttcctaccttcttctgaaccaatttccaattacaacaaattagtatacaaaacatgctcaactcaaaccttcaaccatcaatcttattctca |
35695188 |
T |
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| Q |
119 |
atcactcaattccttattccaacaattcataacacaatcttcccagtacaagttcttcaaaaccaacgaagcaatcaacgacgacaccttcatctc |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35695187 |
atcactcaattccttattccaacaattcataacacaatcttcccaatacaagttcttcaaaaccaacgaagcaatcaacgacgacaccttcatctc |
35695092 |
T |
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