View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17055_high_23 (Length: 237)
Name: NF17055_high_23
Description: NF17055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17055_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 1624331 - 1624127
Alignment:
| Q |
15 |
cacagagaacgaaactcacaaaacaagaaactgaaaccttgatgacccaacaccagttcgaaagagtgaaaccgaagcttgaacgctaccaacagtacaa |
114 |
Q |
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| T |
1624331 |
cacacagaacgaaactcacaaaacaagaaactgaaaccttgatgacccaacaccagttcgaaagagtgaaaccgaagcttgaacactaccaacagtacaa |
1624232 |
T |
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| Q |
115 |
cttgaaagtcaaatagaaaggagcaagaacaccttacccttaccaagaaatgagagagaacccatatcgtgtacccaaaacgccgagaatcgaagaggga |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1624231 |
cttgaaagtcaaatagaaaggagcaagaacaccttacccttaccaagaaatgagagagaacccatatcgtgtacccaaaacgccgagaatcgaagaggga |
1624132 |
T |
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| Q |
215 |
tacga |
219 |
Q |
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||||| |
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| T |
1624131 |
tacga |
1624127 |
T |
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