View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17056_high_16 (Length: 204)
Name: NF17056_high_16
Description: NF17056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17056_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 104785 - 104983
Alignment:
| Q |
1 |
aggttgatgatgcttctatttttgcataacactaacatgaatgagcatacatataatgtaacaagaagaccacagcttactttttctatagtccannnnn |
100 |
Q |
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| T |
104785 |
aggttgatgatgcttctatttttgcataacactaacatgaatgagcatacatataatgtaacaagaa-accacagcttactttttctatagtccaattat |
104883 |
T |
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| Q |
101 |
nnnnnnnnnnnnnnnnnnnctacattatgcatttggaatggaatcacaattttggattttatagagccagtaaattacctttcttccacctttgcttctc |
200 |
Q |
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| T |
104884 |
attatattatattatattactacattatgcatttggaatggaatcacaattttggattttatagagccagtaaattacctttcttccacctttgtttctc |
104983 |
T |
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