View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17056_high_6 (Length: 360)
Name: NF17056_high_6
Description: NF17056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17056_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 21 - 353
Target Start/End: Original strand, 32383395 - 32383728
Alignment:
| Q |
21 |
taaggtacagaattgaagtgtgttcaagctaaaggcaaagaaataagactgttcacctctgcgttcatatataatttccttgggtgacacctaagattgc |
120 |
Q |
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| T |
32383395 |
taaggtacagaattgaagtgtgttcaagctaaaggcaaagaaataagactgttcacctctgcgttcatatataatttccttgggtgacacctaagattgc |
32383494 |
T |
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| Q |
121 |
attcacataagcaaattagc-aacaatttgacatattaaaagatcaatcacagaaactacatccaaaaataggaaccagttaaggaagggaattttgagc |
219 |
Q |
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| T |
32383495 |
attcacataagcaaattagctaacaatttgacatattaaaagatcaatcacagaaattacatccaaaaataggaaccagttaaggaagggaattttgagc |
32383594 |
T |
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| Q |
220 |
atacttgcatcaataaagcccccaaagcagaacatgacgcatcatcatcaatagaaccaacccataacctaagacaagcacaatcaacaaaagcaaatcc |
319 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32383595 |
atacttgcatcaataaagcccccaaagcagaacatgacgcatcatcatcaatagaaccaacccataacctaagacgagcacaatcaacaaaagcaaatcc |
32383694 |
T |
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| Q |
320 |
atatgtaactgaaccattatccgagcctttgctt |
353 |
Q |
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||||||||||||||||||||||||||| |||||| |
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| T |
32383695 |
atatgtaactgaaccattatccgagccattgctt |
32383728 |
T |
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