View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17056_low_16 (Length: 251)
Name: NF17056_low_16
Description: NF17056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17056_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 33511739 - 33511507
Alignment:
| Q |
1 |
tcacctcaatttgataagaatattgaaaattattggtataacatggaaaaatggcggttgttgtgcatgcaatattattatatgtttctacctcaaatag |
100 |
Q |
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| T |
33511739 |
tcacctcaatttgataagaatattgaaaattattggtataacatggaaaaatggcggttgttgtgcatgcaatattattatatgtttctacctcaaatag |
33511640 |
T |
|
| Q |
101 |
aaaccttcccttatgtcacttttcttggtttcttcttagactttgtttagtgtctcaatttgattcttctattaaaatatgtcaataaaatattgataaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33511639 |
aaaccttcccttatgtcacttttcttggtttcttcttagactttgtttagtgtctcaatttgattcttctattaaaatatgtcaataaaatattgataaa |
33511540 |
T |
|
| Q |
201 |
ttgagtagtgatccaaaggtggagtgaccaacg |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
33511539 |
ttgagtagtgatccaaaggtggagtgaccaacg |
33511507 |
T |
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