View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17056_low_17 (Length: 243)
Name: NF17056_low_17
Description: NF17056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17056_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 30357076 - 30356851
Alignment:
| Q |
1 |
ttgatatctcctacaaatatgcaagtataactcccttaaatagttacggagcaatacggcattctgaaattagttacttgtggaagtaaaagtccacgga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
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| T |
30357076 |
ttgatatctcctacaaatatgcaagtataactcccttaaatagttacggagcaatatgacattctgaaattagttacttgtggaagtaaaagtccacggc |
30356977 |
T |
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| Q |
101 |
aaattggtatggagaaatacgacgttagaaaaatctagaaacttaagggtaaagaggatggcaaagagagtacaatacaagtgagaatacaaaaaatcat |
200 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30356976 |
aaattggtatggagaaatacgacgttagaaaagtctagaaacttaggggtaaagaggatggcaaagagagtacaatacaagtgagaatacaaaaaatcat |
30356877 |
T |
|
| Q |
201 |
caagcccaaaaagaaaactaaaagtc |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
30356876 |
caagcccaaaaagaaaactaaaagtc |
30356851 |
T |
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