View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17059_high_16 (Length: 234)
Name: NF17059_high_16
Description: NF17059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17059_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 12000456 - 12000242
Alignment:
| Q |
5 |
tcatataaatgtatgtttgttgtcttaataattgctgaactgaactagtatgaagcatattaccatacaccgataagaactcggcttcaaaatctttcta |
104 |
Q |
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| T |
12000456 |
tcatataaatgtatgtttgttgtcttaatcattg---aactgaactagtatgaagcatattaccatatactgataagaactcggcttcaaaatctttcta |
12000360 |
T |
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| Q |
105 |
tcagaattttgataacattttagggtaaaaggagacggttagtatagacactaaacttgacactaaaaattgaaataagattcattaacagaacaaataa |
204 |
Q |
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| T |
12000359 |
tcagaattttgataacattttagggtaaaaggagacggttagtttagacactaaacttgacactaaaaattgaaataagattcattaacagaacaaataa |
12000260 |
T |
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| Q |
205 |
acttaagatctggaccta |
222 |
Q |
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|||||||||||||||||| |
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| T |
12000259 |
acttaagatctggaccta |
12000242 |
T |
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