View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17059_low_15 (Length: 250)
Name: NF17059_low_15
Description: NF17059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17059_low_15 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 232
Target Start/End: Original strand, 33832297 - 33832513
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
33832297 |
attcatcatcgtttgggtcatccaagtttagataagttgaaagtgttggttccacaactctcacatttaaagtctcttgattgtgagtcgtgtcagcttg |
33832396 |
T |
|
| Q |
116 |
gcaaacatgttcggacatctcttcacaacaagacaaataaaagatccaaacatgcttttgatattgtccattctgatatttggggtcctattcatgtgcc |
215 |
Q |
| |
|
|||||||||||| ||||||| ||||||| | |||||||||||||| ||||| || |||||||| |||||||||||||||||||||| || || || |
|
|
| T |
33832397 |
gcaaacatgttcagacatcttttcacaatagtgtcaataaaagatccaagcatgccttcgatattgtgcattctgatatttggggtcctagccacgttcc |
33832496 |
T |
|
| Q |
216 |
ctctaatttaggataca |
232 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
33832497 |
ctctaatttaggataca |
33832513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 232
Target Start/End: Complemental strand, 37919482 - 37919266
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||| |||||||| |||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
37919482 |
attcaacatcgtttgggtcatccaagtttagataagttgaaagtgttggttccacaactctcacatttaaagtctcttgattgtgagtcgtgtcagcttg |
37919383 |
T |
|
| Q |
116 |
gcaaacatgttcggacatctcttcacaacaagacaaataaaagatccaaacatgcttttgatattgtccattctgatatttggggtcctattcatgtgcc |
215 |
Q |
| |
|
|||||||||||| ||||||| ||||||| | ||||||||||| || ||||| || |||||||| ||||||||||||||||||| || | || | |
|
|
| T |
37919382 |
gcaaacatgttcagacatcttttcacaatagtgtcaataaaagatcgaagcatgccttcgatattgtgcattctgatatttggggtcgtagccgcgttct |
37919283 |
T |
|
| Q |
216 |
ctctaatttaggataca |
232 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
37919282 |
ctctaatttaggataca |
37919266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 7567678 - 7567574
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| |||||||||| | | | ||||| ||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||| ||| |
|
|
| T |
7567678 |
attcatcgtcgtttgggtcatccaaatatgggtaagtcaaaagtgtttgttcctcaactgtcacattttatgtctcttgattgtgagtcgtgttagattg |
7567579 |
T |
|
| Q |
116 |
gcaaa |
120 |
Q |
| |
|
||||| |
|
|
| T |
7567578 |
gcaaa |
7567574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 22505317 - 22505206
Alignment:
| Q |
15 |
tattcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagctt |
114 |
Q |
| |
|
|||||||| |||||| |||||||| ||| | ||||||||||| ||||| ||||| ||||| |||||||| ||||| | ||||||||||||||| | ||| |
|
|
| T |
22505317 |
tattcatcgtcgtttgggtcatcctagttttgataagttaaaggtgttggttcctcaactttcacatttgaagtcattggattgtgagtcatgtcaactt |
22505218 |
T |
|
| Q |
115 |
ggcaaacatgtt |
126 |
Q |
| |
|
||||| |||||| |
|
|
| T |
22505217 |
ggcaagcatgtt |
22505206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 46596370 - 46596260
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||| ||||| | |||||| ||||| | ||||||||||||||| | |||| |
|
|
| T |
46596370 |
attcatcgtcgtttgggtcatccaagttttgataagttaaaggtgttggttcctcaacttttacatttgaagtcattggattgtgagtcatgtcaacttg |
46596271 |
T |
|
| Q |
116 |
gcaaacatgtt |
126 |
Q |
| |
|
|||| |||||| |
|
|
| T |
46596270 |
gcaagcatgtt |
46596260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 37074469 - 37074578
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| ||||||| |||| | ||||||||||| || || ||||| || || |||||||||||||| | |||||||| |||||| |||||| |
|
|
| T |
37074469 |
attcatcgtcgtttgggtcatcgaagtttggataagttaaaggtattagttcctcacctttcacatttaaagtcattggattgtgaatcatgtcagcttg |
37074568 |
T |
|
| Q |
116 |
gcaaacatgt |
125 |
Q |
| |
|
|||||||||| |
|
|
| T |
37074569 |
gcaaacatgt |
37074578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 50960195 - 50960295
Alignment:
| Q |
26 |
gtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttggcaaacatgt |
125 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| ||||| |||| ||| | |||||||| ||||| | ||||||||||||||| | |||||||||||||| |
|
|
| T |
50960195 |
gtttgggtcatccaagtttagataagttaaaggtgttgattcctcaattttcacatttgaagtcattggattgtgagtcatgtcaacttggcaaacatgt |
50960294 |
T |
|
| Q |
126 |
t |
126 |
Q |
| |
|
| |
|
|
| T |
50960295 |
t |
50960295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 232
Target Start/End: Original strand, 36998371 - 36998587
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| ||| | |||| |
|
|
| T |
36998371 |
attcatcatcgtttgggtcatccaagtctagataagttaaaagtgttggttccataactctcacatttaaagtctcttgattgtgagtcgtgtcaacttg |
36998470 |
T |
|
| Q |
116 |
gcaaacatgttcggacatctcttcacaacaagacaaataaaagatccaaacatgcttttgatattgtccattctgatatttggggtcctattcatgtgcc |
215 |
Q |
| |
|
|||||||||||||||||||| |||| | || ||||||||||| || ||||| || |||||||| |||| ||||||||||||||||| || |||| |
|
|
| T |
36998471 |
gcaaacatgttcggacatcttttcatagcagtgtcaataaaagatctaagcatgccttcgatattgtgcattttgatatttggggtcctagtcgcatgcc |
36998570 |
T |
|
| Q |
216 |
ctctaatttaggataca |
232 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
36998571 |
ttctaatttaggataca |
36998587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 43734427 - 43734537
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||| ||||| |||||||| ||||| | ||||||||||||||| | |||| |
|
|
| T |
43734427 |
attcatcgtcgtttgggtcatccaagttttgataagttaaaggtgttggttcctcaactttcacatttgaagtcattggattgtgagtcatgtcaacttg |
43734526 |
T |
|
| Q |
116 |
gcaaacatgtt |
126 |
Q |
| |
|
||||||||||| |
|
|
| T |
43734527 |
gcaaacatgtt |
43734537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 13327917 - 13327795
Alignment:
| Q |
15 |
tattcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagctt |
114 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
13327917 |
tattcatcatcgtttaggtcattcaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcacgttaactt |
13327818 |
T |
|
| Q |
115 |
ggcaaacatgttcggacatctct |
137 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
13327817 |
ggcaaacatgttcggacatctct |
13327795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 13327516 - 13327413
Alignment:
| Q |
132 |
atctcttcacaacaagacaaataaaagatccaaacatgcttttgatattgtccattctgatatttggggtcctattcatgtgccctctaatttaggatac |
231 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
13327516 |
atctcttcacaaaaagacaaataaaagatccaaacatgcttttgatattttccattatgatatttggggtcctaatcatgtgccctctaatttaggatac |
13327417 |
T |
|
| Q |
232 |
aagt |
235 |
Q |
| |
|
|||| |
|
|
| T |
13327416 |
aagt |
13327413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 6998221 - 6998331
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| |||||||||||| | ||||||||||| ||||| ||||| ||||| |||||||| ||||| | ||||||||||||||| | |||| |
|
|
| T |
6998221 |
attcatcgtcgtttgggtcatccaagttttgataagttaaaggtgttggttcctcaactttcacatttgaagtcattggattgtgagtcatgtcaacttg |
6998320 |
T |
|
| Q |
116 |
gcaaacatgtt |
126 |
Q |
| |
|
||||||||||| |
|
|
| T |
6998321 |
gcaaacatgtt |
6998331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 8983702 - 8983806
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| | |||| |||||||||| | | | ||||| ||||||||||||||| |||||||||||||| | |||||||||||||||||| |||||| ||| |
|
|
| T |
8983702 |
attcatcgttgtttgggtcatccaaatatgggtaagtcaaaagtgtttgttcctcaactgtcacattttatgtctcttgattgtgagtcgtgttagattg |
8983801 |
T |
|
| Q |
116 |
gcaaa |
120 |
Q |
| |
|
||||| |
|
|
| T |
8983802 |
gcaaa |
8983806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 44265965 - 44265855
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| |||||||||||| ||||||||||||| ||||| ||||| |||| ||||| || ||||| | ||||||||||||||| | |||| |
|
|
| T |
44265965 |
attcatcgtcgtttgggtcatccaagtttagataagttaaaggtgttggttccttaactttcacacttgaagtcattggattgtgagtcatgtcaacttg |
44265866 |
T |
|
| Q |
116 |
gcaaacatgtt |
126 |
Q |
| |
|
| ||||||||| |
|
|
| T |
44265865 |
ggaaacatgtt |
44265855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 37980449 - 37980340
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| || ||| |||||||||||| | ||||||||||| || || ||||| || || |||||||||||||| | |||||||| |||||| |||||| |
|
|
| T |
37980449 |
attcatcgtcatttgggtcatccaagtttggataagttaaaggtattagttcctcacctttcacatttaaagtcattggattgtgaatcatgtcagcttg |
37980350 |
T |
|
| Q |
116 |
gcaaacatgt |
125 |
Q |
| |
|
|||||||||| |
|
|
| T |
37980349 |
gcaaacatgt |
37980340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 42359910 - 42359809
Alignment:
| Q |
24 |
tcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttggcaaacat |
123 |
Q |
| |
|
|||||| |||||||||||| | ||||||||||| || || ||||| || || |||||||||||||| | |||||||| |||||| |||||||||||||| |
|
|
| T |
42359910 |
tcgtttgggtcatccaagtttggataagttaaaggtattagttcctcacctttcacatttaaagtcattggattgtgaatcatgtcagcttggcaaacat |
42359811 |
T |
|
| Q |
124 |
gt |
125 |
Q |
| |
|
|| |
|
|
| T |
42359810 |
gt |
42359809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 7926731 - 7926841
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| |||||||| ||| | ||||||||||| |||| ||||| ||| | |||||||| ||||| | ||||||||||||||| | |||| |
|
|
| T |
7926731 |
attcatcgtcgtttgggtcatcctagtttcgataagttaaagatgttggttcctcaattttcacatttgaagtcattggattgtgagtcatgtcaacttg |
7926830 |
T |
|
| Q |
116 |
gcaaacatgtt |
126 |
Q |
| |
|
||||||||||| |
|
|
| T |
7926831 |
gcaaacatgtt |
7926841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 45187016 - 45186907
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| | |||| |||||||||||| | ||||||||||| || || |||| || || |||||||||||||| | |||||||| |||||| |||||| |
|
|
| T |
45187016 |
attcatcgtagtttgggtcatccaagtttggataagttaaaggtattaattcctcacctttcacatttaaagtcattggattgtgaatcatgtcagcttg |
45186917 |
T |
|
| Q |
116 |
gcaaacatgt |
125 |
Q |
| |
|
|||||||||| |
|
|
| T |
45186916 |
gcaaacatgt |
45186907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 36498230 - 36498339
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| |||||||||||| | ||||||||||| || || ||||| || || |||||||||||||| |||||||||| |||||| |||||| |
|
|
| T |
36498230 |
attcatcgtcgtttgggtcatccaagtttggataagttaaaggtattagttcctcacctttcacatttaaagtcatttgattgtgaatcatgtcagcttg |
36498329 |
T |
|
| Q |
116 |
gcaaacatgt |
125 |
Q |
| |
|
|||||||||| |
|
|
| T |
36498330 |
gcaaacatgt |
36498339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35002465 - 35002405
Alignment:
| Q |
172 |
tttgatattgtccattctgatatttggggtcctattcatgtgccctctaatttaggataca |
232 |
Q |
| |
|
||||||||||| |||| |||| |||||||||||| |||||| |||| | |||||||||||| |
|
|
| T |
35002465 |
tttgatattgttcattatgatgtttggggtcctagtcatgtaccctattatttaggataca |
35002405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 38503743 - 38503853
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagcttg |
115 |
Q |
| |
|
||||||| |||||| ||||||||||| | ||||||||||| ||||| ||||| ||||| |||||||| ||||| | ||||||||||||||| | |||| |
|
|
| T |
38503743 |
attcatcgtcgtttgagtcatccaagttttgataagttaaaggtgttggttcctcaactttcacatttgaagtcattggattgtgagtcatgtcaacttg |
38503842 |
T |
|
| Q |
116 |
gcaaacatgtt |
126 |
Q |
| |
|
|||| |||||| |
|
|
| T |
38503843 |
gcaagcatgtt |
38503853 |
T |
|
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Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 11076129 - 11076015
Alignment:
| Q |
15 |
tattcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtcatgttagctt |
114 |
Q |
| |
|
|||||||| | |||| |||||| |||||| ||||||||||| || || |||||| |||| |||||||||| | |||| | | |||||| ||| | ||| |
|
|
| T |
11076129 |
tattcatcgttgttttggtcatttaagtctggataagttaaaggtattggttccagaactttcacatttaacgactctaaactatgagtcttgtcaactt |
11076030 |
T |
|
| Q |
115 |
ggcaaacatgttcgg |
129 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
11076029 |
ggcaaatatgttcgg |
11076015 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 21292522 - 21292609
Alignment:
| Q |
16 |
attcatcatcgtttaggtcatccaagtctagataagttaaaagtgtttgttccacaactgtcacatttaaagtctcttgattgtgagtc |
104 |
Q |
| |
|
||||||| |||||| |||||||||||| | ||||||||||| |||| ||||| ||||| | |||||| ||||| | ||||||||||| |
|
|
| T |
21292522 |
attcatcgtcgttt-ggtcatccaagttttgataagttaaagatgttggttcctcaactttgacatttgaagtcattggattgtgagtc |
21292609 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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