View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1705_high_105 (Length: 237)
Name: NF1705_high_105
Description: NF1705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1705_high_105 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 28 - 220
Target Start/End: Original strand, 28768196 - 28768388
Alignment:
| Q |
28 |
agaggttactaccactagtactagcagttgaataatgaaaaagaacaatgatgtttatgttaaaaacctgaagcttgagcacagtaactgaattcctatt |
127 |
Q |
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| T |
28768196 |
agaggttactactactagtactagtagttgaataatgaaaaagaacaatgatgtttatgttaaaaacctgaagcttgagcacagtaactgaattcctatt |
28768295 |
T |
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| Q |
128 |
cccattagcatctttattccaaaatccaacaaaaaagataccaaatgcaaatatcatgaagaacaccaatggcccatttccaccacttgcaac |
220 |
Q |
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| T |
28768296 |
cccattagcatctttattccaaaatccaacaaaaaagataccaaatgcaaatatcatgaagaacaccaatggcccatttccaccacttgcaac |
28768388 |
T |
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