View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1705_high_123 (Length: 220)

Name: NF1705_high_123
Description: NF1705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1705_high_123
NF1705_high_123
[»] chr6 (18 HSPs)
chr6 (160-204)||(34995112-34995156)
chr6 (152-203)||(20393286-20393337)
chr6 (159-203)||(21953203-21953247)
chr6 (160-203)||(34998159-34998202)
chr6 (158-203)||(3276363-3276408)
chr6 (162-204)||(1974169-1974211)
chr6 (162-203)||(21165246-21165287)
chr6 (152-204)||(17517326-17517378)
chr6 (164-204)||(20895960-20896000)
chr6 (165-204)||(3279516-3279555)
chr6 (154-193)||(19321100-19321139)
chr6 (157-203)||(1972395-1972441)
chr6 (155-193)||(19129489-19129527)
chr6 (165-203)||(20391217-20391255)
chr6 (156-193)||(6412212-6412249)
chr6 (162-203)||(20897515-20897556)
chr6 (157-193)||(1007119-1007155)
chr6 (153-193)||(1890421-1890461)
[»] chr3 (34 HSPs)
chr3 (154-202)||(976772-976820)
chr3 (157-203)||(20585662-20585708)
chr3 (159-204)||(47433826-47433871)
chr3 (160-204)||(54437484-54437528)
chr3 (156-203)||(52403142-52403189)
chr3 (158-204)||(38505596-38505642)
chr3 (157-203)||(46026071-46026117)
chr3 (157-198)||(4705676-4705717)
chr3 (163-204)||(45267306-45267347)
chr3 (162-203)||(52708635-52708676)
chr3 (152-196)||(45268595-45268639)
chr3 (160-203)||(39820622-39820665)
chr3 (160-203)||(42446524-42446567)
chr3 (161-204)||(44507816-44507859)
chr3 (161-204)||(46027434-46027477)
chr3 (156-203)||(53121296-53121343)
chr3 (151-193)||(39132875-39132917)
chr3 (162-204)||(46104343-46104385)
chr3 (152-193)||(863271-863312)
chr3 (160-193)||(9603627-9603660)
chr3 (162-203)||(9855178-9855219)
chr3 (152-193)||(12740897-12740938)
chr3 (160-193)||(35407759-35407792)
chr3 (162-203)||(43641143-43641184)
chr3 (156-193)||(52342189-52342226)
chr3 (159-204)||(52707533-52707578)
chr3 (156-196)||(3416489-3416529)
chr3 (160-204)||(22508733-22508777)
chr3 (163-203)||(40476222-40476262)
chr3 (157-193)||(40545559-40545595)
chr3 (161-193)||(43441572-43441604)
chr3 (161-193)||(44802517-44802549)
chr3 (157-193)||(47005488-47005524)
chr3 (157-193)||(51550415-51550451)
[»] chr8 (25 HSPs)
chr8 (160-203)||(22270941-22270984)
chr8 (155-203)||(10717114-10717162)
chr8 (161-203)||(22534740-22534782)
chr8 (153-203)||(38658472-38658522)
chr8 (151-204)||(41847197-41847250)
chr8 (160-203)||(10718466-10718509)
chr8 (161-203)||(22272288-22272330)
chr8 (151-193)||(27117742-27117784)
chr8 (161-203)||(36588221-36588263)
chr8 (160-202)||(38456749-38456791)
chr8 (156-204)||(3483627-3483675)
chr8 (163-203)||(4182623-4182663)
chr8 (160-203)||(45517978-45518021)
chr8 (161-203)||(10292815-10292857)
chr8 (157-203)||(28998011-28998057)
chr8 (157-195)||(29574737-29574775)
chr8 (158-192)||(30124252-30124286)
chr8 (162-203)||(297137-297177)
chr8 (162-203)||(1420460-1420501)
chr8 (156-193)||(11019826-11019863)
chr8 (156-193)||(28346727-28346764)
chr8 (161-193)||(3680770-3680802)
chr8 (161-193)||(4474013-4474045)
chr8 (157-193)||(10337114-10337150)
chr8 (161-193)||(10872914-10872946)
[»] scaffold0562 (1 HSPs)
scaffold0562 (157-203)||(9917-9963)
[»] chr4 (30 HSPs)
chr4 (157-203)||(3879081-3879127)
chr4 (162-202)||(32697999-32698039)
chr4 (165-204)||(47360949-47360988)
chr4 (165-203)||(17371863-17371901)
chr4 (158-204)||(19674410-19674456)
chr4 (161-203)||(33137246-33137288)
chr4 (161-204)||(29060899-29060942)
chr4 (160-203)||(38166493-38166536)
chr4 (152-203)||(42359364-42359415)
chr4 (160-203)||(45618283-45618326)
chr4 (156-194)||(13074093-13074131)
chr4 (161-203)||(17281570-17281612)
chr4 (161-203)||(17370072-17370114)
chr4 (159-193)||(47023074-47023108)
chr4 (162-203)||(19675638-19675679)
chr4 (162-203)||(22204055-22204096)
chr4 (160-193)||(23245564-23245597)
chr4 (160-193)||(26412188-26412221)
chr4 (156-193)||(31811919-31811956)
chr4 (160-193)||(33134889-33134922)
chr4 (161-198)||(34659705-34659742)
chr4 (156-193)||(42823770-42823807)
chr4 (157-198)||(45619754-45619795)
chr4 (161-193)||(2322401-2322433)
chr4 (157-193)||(14594201-14594237)
chr4 (157-193)||(26313983-26314019)
chr4 (152-204)||(29059703-29059755)
chr4 (161-193)||(31560330-31560362)
chr4 (157-193)||(35464013-35464049)
chr4 (161-193)||(44925484-44925516)
[»] chr2 (25 HSPs)
chr2 (160-202)||(12068364-12068406)
chr2 (161-203)||(25979269-25979311)
chr2 (159-204)||(29794334-29794378)
chr2 (157-193)||(33575747-33575783)
chr2 (158-193)||(1138328-1138363)
chr2 (161-204)||(1777468-1777511)
chr2 (152-203)||(1778808-1778859)
chr2 (160-203)||(2412446-2412489)
chr2 (156-195)||(25977864-25977903)
chr2 (151-193)||(2481526-2481568)
chr2 (162-204)||(25283289-25283331)
chr2 (152-194)||(33882940-33882982)
chr2 (156-194)||(38231425-38231463)
chr2 (157-195)||(43236499-43236537)
chr2 (158-195)||(4038838-4038875)
chr2 (162-203)||(11087049-11087090)
chr2 (156-193)||(24358610-24358647)
chr2 (161-193)||(4042609-4042641)
chr2 (157-193)||(14003404-14003440)
chr2 (156-192)||(15531023-15531059)
chr2 (153-193)||(17541745-17541785)
chr2 (157-193)||(20131312-20131348)
chr2 (160-203)||(20245323-20245367)
chr2 (161-193)||(24358914-24358946)
chr2 (161-193)||(32476094-32476126)
[»] chr7 (34 HSPs)
chr7 (160-204)||(24197120-24197164)
chr7 (159-203)||(32197927-32197971)
chr7 (157-203)||(17066420-17066466)
chr7 (152-204)||(41694972-41695024)
chr7 (165-203)||(5610159-5610197)
chr7 (153-203)||(5611525-5611575)
chr7 (161-203)||(41693644-41693686)
chr7 (160-204)||(12933417-12933461)
chr7 (153-193)||(25988376-25988416)
chr7 (159-203)||(31848162-31848206)
chr7 (165-204)||(11217088-11217127)
chr7 (154-193)||(20355400-20355439)
chr7 (160-203)||(40576764-40576807)
chr7 (161-203)||(13418949-13418991)
chr7 (161-203)||(24195606-24195648)
chr7 (157-195)||(31695681-31695719)
chr7 (157-203)||(31846981-31847027)
chr7 (165-203)||(32544792-32544830)
chr7 (152-193)||(11767244-11767285)
chr7 (152-193)||(23399602-23399643)
chr7 (156-193)||(35470249-35470286)
chr7 (153-193)||(1614550-1614590)
chr7 (153-193)||(3975807-3975847)
chr7 (153-193)||(16853558-16853598)
chr7 (163-203)||(32196685-32196725)
chr7 (161-193)||(34878094-34878126)
chr7 (153-193)||(35104264-35104304)
chr7 (157-193)||(35210177-35210213)
chr7 (157-193)||(35838306-35838342)
chr7 (157-193)||(41054205-41054241)
chr7 (160-204)||(43065999-43066043)
chr7 (161-193)||(44568659-44568691)
chr7 (157-193)||(46759653-46759689)
chr7 (161-193)||(48854039-48854071)
[»] scaffold0002 (3 HSPs)
scaffold0002 (156-203)||(376387-376434)
scaffold0002 (159-203)||(345915-345959)
scaffold0002 (162-203)||(374335-374376)
[»] chr1 (28 HSPs)
chr1 (160-203)||(46073883-46073926)
chr1 (161-203)||(35911906-35911948)
chr1 (162-204)||(37396857-37396899)
chr1 (158-203)||(34934765-34934810)
chr1 (160-204)||(48334149-48334193)
chr1 (161-204)||(20723705-20723748)
chr1 (161-204)||(45979513-45979556)
chr1 (161-203)||(9774906-9774948)
chr1 (162-203)||(11711271-11711312)
chr1 (162-203)||(20722472-20722513)
chr1 (155-204)||(26863853-26863902)
chr1 (158-203)||(35722303-35722348)
chr1 (162-203)||(46075068-46075109)
chr1 (158-198)||(39163047-39163087)
chr1 (146-193)||(15516566-15516613)
chr1 (160-203)||(27264234-27264277)
chr1 (150-193)||(33000293-33000336)
chr1 (160-203)||(35721099-35721142)
chr1 (161-204)||(50164402-50164445)
chr1 (161-203)||(17977577-17977619)
chr1 (161-203)||(27262907-27262949)
chr1 (161-203)||(37395632-37395674)
chr1 (152-193)||(21391086-21391127)
chr1 (159-204)||(30724032-30724077)
chr1 (161-194)||(31061119-31061152)
chr1 (157-193)||(10887228-10887264)
chr1 (162-198)||(23469992-23470028)
chr1 (161-193)||(48153011-48153043)
[»] scaffold0517 (2 HSPs)
scaffold0517 (162-204)||(10315-10357)
scaffold0517 (161-203)||(11540-11582)
[»] scaffold0001 (2 HSPs)
scaffold0001 (162-204)||(119593-119635)
scaffold0001 (162-203)||(121003-121044)
[»] chr5 (19 HSPs)
chr5 (159-203)||(15599762-15599806)
chr5 (159-203)||(31540493-31540537)
chr5 (162-202)||(31541641-31541681)
chr5 (157-193)||(36278076-36278112)
chr5 (164-203)||(14809165-14809204)
chr5 (161-203)||(3936577-3936619)
chr5 (156-198)||(25252635-25252677)
chr5 (156-198)||(25316420-25316462)
chr5 (161-203)||(27571147-27571189)
chr5 (161-203)||(34911846-34911888)
chr5 (159-193)||(38554748-38554782)
chr5 (164-193)||(3205130-3205159)
chr5 (156-193)||(19565800-19565837)
chr5 (156-193)||(35877021-35877058)
chr5 (160-193)||(40038492-40038525)
chr5 (160-196)||(3938085-3938121)
chr5 (159-203)||(3954049-3954093)
chr5 (160-196)||(27459515-27459551)
chr5 (153-193)||(40764406-40764446)
[»] scaffold0009 (1 HSPs)
scaffold0009 (161-203)||(202578-202620)
[»] scaffold0106 (1 HSPs)
scaffold0106 (159-192)||(29726-29759)
[»] scaffold0024 (1 HSPs)
scaffold0024 (156-193)||(75353-75390)
[»] scaffold0007 (1 HSPs)
scaffold0007 (160-193)||(2499-2532)
[»] scaffold0684 (1 HSPs)
scaffold0684 (157-193)||(2629-2665)
[»] scaffold0326 (2 HSPs)
scaffold0326 (153-193)||(4032-4072)
scaffold0326 (153-193)||(19214-19254)
[»] scaffold0176 (1 HSPs)
scaffold0176 (161-193)||(21695-21727)
[»] scaffold0005 (1 HSPs)
scaffold0005 (157-193)||(223141-223177)


Alignment Details
Target: chr6 (Bit Score: 45; Significance: 8e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 34995112 - 34995156
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34995112 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 34995156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 20393337 - 20393286
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  20393337 atttatatttggctaaaatatgcttttgatccctgcaaatatagcgaatttg 20393286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 21953203 - 21953247
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21953203 ttaggctaaaatatgcttttggtccctgcaaatatagcgaatttg 21953247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 34998202 - 34998159
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  34998202 taggctaaaatatgcttttgatccctgcaaatatagcgagtttg 34998159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 3276363 - 3276408
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  3276363 tttaggctaaaatatgtttttggtccctgcaaatatagcgaatttg 3276408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 1974211 - 1974169
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||| ||||||||| ||||||||||||||||||||    
T  1974211 ggctaaaatatgtttttgatccttgcaaatatagcgaatttga 1974169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 21165246 - 21165287
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  21165246 ggctaaaatatgcttttggtccctgcaaatatagcgagtttg 21165287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 17517378 - 17517326
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||| ||||||||||||||||| ||||| ||||||||||||| |||| |||||    
T  17517378 attttttttaggctaaaatatgtttttggtccctgcaaatatggcgagtttga 17517326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 20895960 - 20896000
Alignment:
Q  164 ctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  20895960 ctaaaatatgtttttggtccctgcaaatatagcgaatttga 20896000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 3279555 - 3279516
Alignment:
Q  165 taaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  3279555 taaaatatgtttttgatccctgcaaatatagcgagtttga 3279516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 19321139 - 19321100
Alignment:
Q  154 ttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  19321139 ttattttaggctaaaatatggttttggtccctgcaaatat 19321100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 1972395 - 1972441
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||| |||||||||||| ||||| |||||||||||| ||||||||||    
T  1972395 tttttggctaaaatatgtttttggtccctgcaaataaagcgaatttg 1972441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 19129527 - 19129489
Alignment:
Q  155 tattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  19129527 tattttaggctaaaatatgattttggtccctgcaaatat 19129489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 20391217 - 20391255
Alignment:
Q  165 taaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  20391217 taaaatatgcttttggtccctgcaaatatagtgaatttg 20391255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 6412212 - 6412249
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  6412212 attttaggctaaaatatggttttggtccctgcaaatat 6412249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 20897556 - 20897515
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| ||||| ||||||||||||||| |||||||    
T  20897556 ggctaaaatatggttttggtccctgcaaatatagtgaatttg 20897515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 1007119 - 1007155
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  1007119 ttttaggctaaaatatggttttggtccctgcaaatat 1007155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 1890461 - 1890421
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||||| ||||  |||||||||||||    
T  1890461 tttattttaggctaaaatatggttttagtccctgcaaatat 1890421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 976772 - 976820
Alignment:
Q  154 ttattttaggctaaaatatgcttttgatccctgcaaatatagcgaattt 202  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  976772 ttatattaggctaaaatatgcttttgatccctgcaaatatagcgaattt 976820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 20585708 - 20585662
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  20585708 ttttaggctaaaatatgtttttgatccctgcaaatatagcgagtttg 20585662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 47433871 - 47433826
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  47433871 ttaggctaaaatatggttttggtccctgcaaatatagcgaatttga 47433826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 54437528 - 54437484
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||    
T  54437528 taggctaaaatatgtttttggtccctgcaaatatagcgaatttga 54437484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 52403189 - 52403142
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  52403189 attttaggctaaaatatgcttttggtccctgcaaatatggcgagtttg 52403142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 38505642 - 38505596
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||    
T  38505642 tttaggctaaaatatgcttttgctccctgcaaatatggcgagtttga 38505596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 46026071 - 46026117
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  46026071 ttttaggctaaaatatgtttttggtccctgcaaatatagcgagtttg 46026117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 4705676 - 4705717
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcga 198  Q
    |||| |||||||||||||||||||||||||||||||| ||||    
T  4705676 tttttggctaaaatatgcttttgatccctgcaaatatggcga 4705717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 45267306 - 45267347
Alignment:
Q  163 gctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  45267306 gctaaaatatgtttttgatccctgcaaatatagcgagtttga 45267347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 52708676 - 52708635
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||| |||||||||||||||||| ||||    
T  52708676 ggctaaaatatgcttttggtccctgcaaatatagcgagtttg 52708635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 45268639 - 45268595
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatatagc 196  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||    
T  45268639 attttttttaggctaaaatatgtttttaatccctgcaaatatagc 45268595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 39820665 - 39820622
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||    
T  39820665 taggctaaaatatggttttggtccctgcaaatatagcgagtttg 39820622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 42446524 - 42446567
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||    
T  42446524 taggctaaaatatgcttttggtccctgcaaatatggcgagtttg 42446567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 44507859 - 44507816
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||    
T  44507859 aggctaaaatatgattttggtccctgcaaatatagcgagtttga 44507816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 46027477 - 46027434
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||| |||||| |||||||||||||||||| |||||    
T  46027477 aggctaaaatatacttttggtccctgcaaatatagcgagtttga 46027434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 53121296 - 53121343
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||| ||||||||||||| ||||| |||||||||||||||||| ||||    
T  53121296 atttaaggctaaaatatgtttttggtccctgcaaatatagcgagtttg 53121343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 39132917 - 39132875
Alignment:
Q  151 catttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||    
T  39132917 cattttttttaggctaaaatatggttttggtccctgcaaatat 39132875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 46104343 - 46104385
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  46104343 ggctaaaatatgattttggtccctgcaaatatagcgagtttga 46104385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 863271 - 863312
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||||||| ||||| ||| |||||||||    
T  863271 atttattttaggctaaaatatgattttggtccatgcaaatat 863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 9603627 - 9603660
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||| |||||||||||||||||||    
T  9603627 taggctaaaatatggttttgatccctgcaaatat 9603660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 9855178 - 9855219
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| |||||||||||| ||||||||||| ||||    
T  9855178 ggctaaaatatgattttgatccctgtaaatatagcgagtttg 9855219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 12740897 - 12740938
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||| ||||||||||||||||| ||||| |||||||||||||    
T  12740897 attttttttaggctaaaatatggttttggtccctgcaaatat 12740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 35407792 - 35407759
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||| |||||||||||||||||||    
T  35407792 taggctaaaatatggttttgatccctgcaaatat 35407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 43641143 - 43641184
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||  |||||||||||||||||| ||||    
T  43641143 ggctaaaatatgcttttagtccctgcaaatatagcgagtttg 43641184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 52342189 - 52342226
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  52342189 attttaggctaaaatatggttttggtccctgcaaatat 52342226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 52707533 - 52707578
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||| ||||||||| ||||| ||| ||||||||||||||||||||    
T  52707533 ttaggttaaaatatgtttttggtccttgcaaatatagcgaatttga 52707578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 3416489 - 3416529
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatagc 196  Q
    |||| ||||||||||||| |||||||||||| |||||||||    
T  3416489 atttaaggctaaaatatgattttgatccctgtaaatatagc 3416529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 22508733 - 22508777
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||| ||||||||| ||||| |||||||||||||||||| |||||    
T  22508733 taggttaaaatatgattttggtccctgcaaatatagcgagtttga 22508777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 40476222 - 40476262
Alignment:
Q  163 gctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||| ||||| |||||||||||||||||| ||||    
T  40476222 gctaaaatatgtttttggtccctgcaaatatagcgagtttg 40476262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 40545559 - 40545595
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  40545559 ttttaggctaaaatatggttttggtccctgcaaatat 40545595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 43441604 - 43441572
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  43441604 aggctaaaatatggttttgatccctgcaaatat 43441572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 44802549 - 44802517
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  44802549 aggctaaaatatgattttgatccctgcaaatat 44802517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 47005524 - 47005488
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  47005524 ttttaggctaaaatatggttttggtccctgcaaatat 47005488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 51550451 - 51550415
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  51550451 ttttaggctaaaatatggttttggtccctgcaaatat 51550415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 22270941 - 22270984
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22270941 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 22270984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 10717114 - 10717162
Alignment:
Q  155 tattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  10717114 tattttaggctaaaatatgcttttggtccctgcaaatatagcgagtttg 10717162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 22534782 - 22534740
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  22534782 aggctaaaatatgcttttgatccctgcaaatatagcgagtttg 22534740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 38658472 - 38658522
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  38658472 tttattttaggctaaaatatgcttctggtccatgcaaatatagcgaatttg 38658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 41847250 - 41847197
Alignment:
Q  151 catttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||| |||||||||||||||||||||||  || |||||||||||||||||||||    
T  41847250 cattcattttaggctaaaatatgcttttagtctctgcaaatatagcgaatttga 41847197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 10718509 - 10718466
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  10718509 taggctaaaatatgcttttggtccctgcaaatatagcgagtttg 10718466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 22272330 - 22272288
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  22272330 aggctaaaatatgcttttggtccccgcaaatatagcgaatttg 22272288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 27117742 - 27117784
Alignment:
Q  151 catttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  27117742 catttattttaggctaaaatatggttttgctccctgcaaatat 27117784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 36588221 - 36588263
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  36588221 aggctaaaatatgcttttggtccctgcaaatatagcgagtttg 36588263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 38456791 - 38456749
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaattt 202  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  38456791 taggctaaaatatgcttttggtccctgcaaatatagcaaattt 38456749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 3483627 - 3483675
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||| |||||||||| ||||| |||||||||||||||||| |||||    
T  3483627 attttagactaaaatatgtttttggtccctgcaaatatagcgagtttga 3483675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 4182623 - 4182663
Alignment:
Q  163 gctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  4182623 gctaaaatatgcttttggtccctgtaaatatagcgaatttg 4182663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 45518021 - 45517978
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||    
T  45518021 taggctaaaatatgcttttggtccctgcaagtatagcgagtttg 45517978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 10292815 - 10292857
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||    
T  10292815 aggctaaaatatgattttggtcccttcaaatatagcgaatttg 10292857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 28998057 - 28998011
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||| |||||||||||| ||||| |||||||||||||||||| ||||    
T  28998057 tttttggctaaaatatgtttttggtccctgcaaatatagcgagtttg 28998011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 29574737 - 29574775
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatag 195  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  29574737 ttttaggctaaaatatgcatttcatccctgcaaatatag 29574775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 30124286 - 30124252
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaata 192  Q
    |||||||||||||||||||||| ||||||||||||    
T  30124286 tttaggctaaaatatgcttttggtccctgcaaata 30124252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 297177 - 297137
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  297177 ggctaaaatatgctttag-tccctgcaaatatagcgaatttg 297137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 1420501 - 1420460
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| ||||| |||||||||||||||||| ||||    
T  1420501 ggctaaaatatgtttttggtccctgcaaatatagcgagtttg 1420460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 11019863 - 11019826
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  11019863 attttaggctaaaatatggttttggtccctgcaaatat 11019826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 28346764 - 28346727
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  28346764 attttaggctaaaatatggttttggtccctgcaaatat 28346727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 3680802 - 3680770
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  3680802 aggctaaaatatgattttgatccctgcaaatat 3680770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 4474045 - 4474013
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  4474045 aggctaaaatatggttttgatccctgcaaatat 4474013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 10337114 - 10337150
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  10337114 ttttaggctaaaatatggttttggtccctgcaaatat 10337150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 10872914 - 10872946
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  10872914 aggctaaaatatggttttgatccctgcaaatat 10872946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 9917 - 9963
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9917 ttttaggctaaaatatgcttttgatccctgcaaatatagcgagtttg 9963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 3879081 - 3879127
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3879081 ttttaggctaaaatatgcttttgatccctgcaaatatagcgagtttg 3879127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 32697999 - 32698039
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaattt 202  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  32697999 ggctaaaatatgattttgatccctgcaaatatagcgaattt 32698039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 47360988 - 47360949
Alignment:
Q  165 taaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  47360988 taaaatatgcttttgatccttgcaaatatagcgaatttga 47360949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 17371901 - 17371863
Alignment:
Q  165 taaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17371901 taaaatatgcttttgatccctgcaaatataacgaatttg 17371863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 19674410 - 19674456
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  19674410 tttaggctaaaatatgcttttggtccttgcaaatatagcgagtttga 19674456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 33137288 - 33137246
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| |||||||||||||||||||||||| ||||    
T  33137288 aggctaaaatatgtttttgatccctgcaaatatagcgagtttg 33137246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 29060942 - 29060899
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||    
T  29060942 aggctaaaatatgtttttaatccctgcaaatatagcgagtttga 29060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 38166493 - 38166536
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||    
T  38166493 taggctaaaatatgtttttaatccctgcaaatatagcgagtttg 38166536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 42359415 - 42359364
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||| |||| |||||||||||| ||||| |||||||||||||||||| ||||    
T  42359415 atttttttttggctaaaatatgtttttggtccctgcaaatatagcgagtttg 42359364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 45618283 - 45618326
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||    
T  45618283 taggctaatatatgcttttggtccctgcaaatatagcgagtttg 45618326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 13074131 - 13074093
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatata 194  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  13074131 attttaggctaaaatatggttttggtccctgcaaatata 13074093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 17281570 - 17281612
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||| |||||||  |||||||||||||||||||||||    
T  17281570 aggctaaaatgtgcttttagtccctgcaaatatagcgaatttg 17281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 17370072 - 17370114
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||| |||||||  |||||||||||||||||||||||    
T  17370072 aggctaaaatgtgcttttagtccctgcaaatatagcgaatttg 17370114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 47023108 - 47023074
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||| |||||||||||||||||||    
T  47023108 ttaggctaaaatatggttttgatccctgcaaatat 47023074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 19675679 - 19675638
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||| |||||||||||||| ||| ||||    
T  19675679 ggctaaaatatgcttttggtccctgcaaatataacgagtttg 19675638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 22204055 - 22204096
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| ||||| |||||||||||||||||| ||||    
T  22204055 ggctaaaatatgtttttggtccctgcaaatatagcgagtttg 22204096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Complemental strand, 23245597 - 23245564
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||| |||||||||||||||||||    
T  23245597 taggctaaaatatggttttgatccctgcaaatat 23245564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 26412188 - 26412221
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||| |||||||||||||||||||    
T  26412188 taggctaaaatatggttttgatccctgcaaatat 26412221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 31811919 - 31811956
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  31811919 atttaaggctaaaatatggttttgatccctgcaaatat 31811956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 33134889 - 33134922
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||| |||||||||||||||||||    
T  33134889 taggctaaaatatgtttttgatccctgcaaatat 33134922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 34659705 - 34659742
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcga 198  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  34659705 aggctaaaatatgcttttggtccctgcaaatatggcga 34659742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 42823770 - 42823807
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  42823770 attttaggctaaaatatgattttggtccctgcaaatat 42823807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 45619795 - 45619754
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcga 198  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  45619795 ttttaggctaaaatatgtttttagtccctgcaaatatagcga 45619754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 2322433 - 2322401
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  2322433 aggctaaaatatggttttgatccctgcaaatat 2322401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 14594201 - 14594237
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  14594201 ttttaggctaaaatatggttttggtccctgcaaatat 14594237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 26313983 - 26314019
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||| |||||||||||| |||||||||||||||||||    
T  26313983 tttttggctaaaatatggttttgatccctgcaaatat 26314019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 29059703 - 29059755
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||  ||||||||||||| ||||  |||||||||||||| |||||||||    
T  29059703 atttattaaaggctaaaatatgtttttcgtccctgcaaatataacgaatttga 29059755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 31560330 - 31560362
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  31560330 aggctaaaatatggttttgatccctgcaaatat 31560362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 35464013 - 35464049
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  35464013 ttttaggctaaaatatggttttggtccctgcaaatat 35464049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 44925484 - 44925516
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  44925484 aggctaaaatatggttttgatccctgcaaatat 44925516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 12068406 - 12068364
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaattt 202  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12068406 taggctaaaatatgcttttgatccctgcaaatatagcgaattt 12068364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 25979311 - 25979269
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  25979311 aggctaaaatatgtttttggtccctgcaaatatagcgaatttg 25979269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 29794378 - 29794334
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  29794378 ttaggctaaaatatg-ttttggtccctgcaaatatagcgaatttga 29794334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 33575747 - 33575783
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| |||||||||||||||||||    
T  33575747 ttttaggctaaaatatggttttgatccctgcaaatat 33575783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 1138363 - 1138328
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||| |||||||||||||||||||    
T  1138363 tttaggctaaaatatggttttgatccctgcaaatat 1138328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 1777468 - 1777511
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||    
T  1777468 aggctaaaatatgtttttggtccctgcaaatatagcgagtttga 1777511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 1778859 - 1778808
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||  |||||||||||||||||| | |||||||||||||||| ||||    
T  1778859 atttatttatggctaaaatatgcttttggttcctgcaaatatagcgactttg 1778808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 2412489 - 2412446
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||    
T  2412489 taggctaaaatatgtttttggtccctgcaaatatagcgagtttg 2412446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 25977864 - 25977903
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatag 195  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  25977864 attttaggctaaaatatgtttttggtccctgcaaatatag 25977903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 2481568 - 2481526
Alignment:
Q  151 catttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||    
T  2481568 catttatttaaggctaaaatatggttttggtccctgcaaatat 2481526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 25283331 - 25283289
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||| ||||| || |||||||||||||||||||||    
T  25283331 ggctaaaatatgtttttggtcactgcaaatatagcgaatttga 25283289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 33882982 - 33882940
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatata 194  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||    
T  33882982 atttattttagactaaaatatgcatttcatccctgcaaatata 33882940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 38231425 - 38231463
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatata 194  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  38231425 atttttggctaaaatatgattttgatccctgcaaatata 38231463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 43236499 - 43236537
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatag 195  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  43236499 ttttaggctaaaatatgcattttatccctgcaaatatag 43236537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 4038838 - 4038875
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatatag 195  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  4038838 tttaggctaaaatatgattttgatccctgtaaatatag 4038875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 11087049 - 11087090
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| |||| ||||||||||||||||||| ||||    
T  11087049 ggctaaaatatgattttaatccctgcaaatatagcgagtttg 11087090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 24358610 - 24358647
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  24358610 attttaggctaaaatatggttttggtccctgcaaatat 24358647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 4042609 - 4042641
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  4042609 aggctaaaatatggttttgatccctgcaaatat 4042641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 14003404 - 14003440
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  14003404 ttttaggctaaaatatggttttggtccctgcaaatat 14003440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 15531023 - 15531059
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaata 192  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  15531023 attttaggctaaaatatgtttttggtccctgcaaata 15531059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 17541785 - 17541745
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||| ||||||||||||| |||| ||||||||||||||    
T  17541785 tttatttaaggctaaaatatggttttaatccctgcaaatat 17541745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 20131312 - 20131348
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  20131312 ttttaggctaaaatatggttttggtccctgcaaatat 20131348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 20245367 - 20245323
Alignment:
Q  160 taggctaaaatatgctttt-gatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||    
T  20245367 taggctaaaatatggtttttgattcctgcaaatatagcgaatttg 20245323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 24358946 - 24358914
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  24358946 aggctaaaatatggttttgatccctgcaaatat 24358914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 32476094 - 32476126
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  32476094 aggctaaaatatggttttgatccctgcaaatat 32476126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 24197164 - 24197120
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  24197164 taggctaaaatatgcttttggtccctgcaaatatagcgaatttga 24197120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 32197971 - 32197927
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  32197971 ttaggctaaaatatgcttttggtccctgcaaatatagcgaatttg 32197927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 17066420 - 17066466
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  17066420 ttttaggctaaaatatgcttttaatccctgcaaatatagcgagtttg 17066466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 41695024 - 41694972
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||||| |||||    
T  41695024 atttaatttaggctaaaatatgtttttcatccctgcaaatatagcgagtttga 41694972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 5610159 - 5610197
Alignment:
Q  165 taaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  5610159 taaaatatgcttttgatccctgcaaatataacgaatttg 5610197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 5611575 - 5611525
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||| |||||||||||||||| ||||| |||||||||||||||||| ||||    
T  5611575 tttaatttaggctaaaatatgattttggtccctgcaaatatagcgagtttg 5611525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 41693644 - 41693686
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  41693644 aggctaaaatatgtttttgatccctgcaaatatggcgaatttg 41693686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 12933417 - 12933461
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||||| ||||||||||||||| || |||||    
T  12933417 taggctaaaatatgcttttggtccctgcaaatatagtgagtttga 12933461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 25988376 - 25988416
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  25988376 tttattttaggctaaaatatggttttggtccctgcaaatat 25988416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 31848206 - 31848162
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||    
T  31848206 ttaggctaaaatatgtttttagtccctgcaaatatagcgaatttg 31848162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 11217127 - 11217088
Alignment:
Q  165 taaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  11217127 taaaatatgcttttggtccctgcaaatatagcgagtttga 11217088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 20355400 - 20355439
Alignment:
Q  154 ttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  20355400 ttattttaggctaaaatatgattttgatccttgcaaatat 20355439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 40576764 - 40576807
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||| |||||||||||||  ||||||||    
T  40576764 taggctaaaatatgcttttggtccctgcaaatatgacgaatttg 40576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 13418949 - 13418991
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||    
T  13418949 aggctaaaatatgtttttggtccctgcaaatattgcgaatttg 13418991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 24195606 - 24195648
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||    
T  24195606 aggctaaaatatgtttttggtccctgcaaatatagcgagtttg 24195648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 31695719 - 31695681
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatag 195  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  31695719 ttttaggctaaaatatgcatttcatccctgcaaatatag 31695681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 31846981 - 31847027
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||| ||||||||||||||| |||||||||||||| | ||||||    
T  31846981 ttttaggttaaaatatgcttttggtccctgcaaatatatctaatttg 31847027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 32544830 - 32544792
Alignment:
Q  165 taaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  32544830 taaaatatgattttggtccctgcaaatatagcgaatttg 32544792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 11767285 - 11767244
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||| ||||||||||||||||| ||||| |||||||||||||    
T  11767285 attttttttaggctaaaatatggttttggtccctgcaaatat 11767244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 23399602 - 23399643
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||| ||||||||||||||||| ||||| |||||||||||||    
T  23399602 attttttttaggctaaaatatggttttggtccctgcaaatat 23399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 35470286 - 35470249
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||| || |||||||||||||||||||    
T  35470286 attttaggctaaaatttggttttgatccctgcaaatat 35470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 1614550 - 1614590
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||| |||||||||||||| ||||| |||||||||||||    
T  1614550 tttattataggctaaaatatggttttggtccctgcaaatat 1614590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 3975847 - 3975807
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||| |||||||||||||||| ||||| |||||||||||||    
T  3975847 tttaatttaggctaaaatatggttttggtccctgcaaatat 3975807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 16853598 - 16853558
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||| |||||||||||| ||||| |||||||||||||    
T  16853598 tttatttttggctaaaatatggttttggtccctgcaaatat 16853558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 32196685 - 32196725
Alignment:
Q  163 gctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||| ||||| ||||||||||||||||| |||||    
T  32196685 gctaaaatatgtttttggtccctgcaaatatagcgtatttg 32196725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 34878126 - 34878094
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  34878126 aggctaaaatatggttttgatccctgcaaatat 34878094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 35104304 - 35104264
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| ||||||| ||||| |||||||||||||    
T  35104304 tttattttaggctcaaatatggttttggtccctgcaaatat 35104264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 35210177 - 35210213
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  35210177 ttttaggctaaaatatgattttgatcccggcaaatat 35210213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 35838342 - 35838306
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  35838342 ttttaggctaaaatatggttttggtccctgcaaatat 35838306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 41054241 - 41054205
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  41054241 ttttaggctaaaatatggttttggtccctgcaaatat 41054205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 43065999 - 43066043
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||| ||||||||| |||| ||||||||||||||||||| |||||    
T  43065999 taggttaaaatatgttttttatccctgcaaatatagcgagtttga 43066043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 44568691 - 44568659
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  44568691 aggctaaaatatggttttgatccctgcaaatat 44568659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 46759653 - 46759689
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  46759653 ttttaggctaaaatatggttttggtccctgcaaatat 46759689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 48854071 - 48854039
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  48854071 aggctaaaatatgattttgatccctgcaaatat 48854039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 376434 - 376387
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  376434 attttaggctaaaatatgcttttggtccctgcaaatatagcgagtttg 376387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 345959 - 345915
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  345959 ttaggctaaaatatgtttttggtccctgcaaatatagcgaatttg 345915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 374335 - 374376
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  374335 ggctaaaatatgattttgatccctgcaaatatagcgagtttg 374376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 46073883 - 46073926
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  46073883 taggctaaaatatgcttttgatccctgcaaatatagcaaatttg 46073926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 35911948 - 35911906
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  35911948 aggctaaaatatgcttttggtccctgcaaatatagcgaatttg 35911906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 37396899 - 37396857
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  37396899 ggctaaaatatgcttttggtccctgcaaatatagcgaatttga 37396857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 34934810 - 34934765
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  34934810 tttaggctaaaatatgctttttgtccctgcaaatatagcgaatttg 34934765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 48334193 - 48334149
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  48334193 taggctaaaatatgcttttggtccctacaaatatagcgaatttga 48334149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 20723748 - 20723705
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  20723748 aggctaaaatatgtttttggtccctgcaaatatagcgaatttga 20723705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 45979556 - 45979513
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  45979556 aggctaaaatatgtttttggtccctgcaaatatagcgaatttga 45979513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 9774948 - 9774906
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  9774948 aggctaaaatatgcttttggtccctgcaaatatagcgagtttg 9774906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 11711312 - 11711271
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  11711312 ggctaaaatatgtttttggtccctgcaaatatagcgaatttg 11711271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 20722472 - 20722513
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  20722472 ggctaaaatgtgcttttggtccctgcaaatatagcgaatttg 20722513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 26863853 - 26863902
Alignment:
Q  155 tattttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  26863853 tatttaaggctaaaatgtgtttttggtccctgcaaatatagcgaatttga 26863902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 35722348 - 35722303
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||    
T  35722348 tttaggctaaaatatgtttttggtccctgtaaatatagcgaatttg 35722303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 46075109 - 46075068
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  46075109 ggctaaaatatgtttttgatccctgcaaatatagcgagtttg 46075068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 39163087 - 39163047
Alignment:
Q  158 tttaggctaaaatatgcttttgatccctgcaaatatagcga 198  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  39163087 tttaggctaaaatatgcttttggtccctgcaaatatggcga 39163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 15516566 - 15516613
Alignment:
Q  146 atttccatttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||| |||| |||||||||||||||||| ||||| |||||||||||||    
T  15516566 atttacattgattttaggctaaaatatggttttggtccctgcaaatat 15516613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 27264277 - 27264234
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||    
T  27264277 taggctaaaatatgattttggtccctgcaaatatagcgagtttg 27264234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 33000293 - 33000336
Alignment:
Q  150 ccatttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||    
T  33000293 ccatttattttcggctaaaatatggttttggtccctgcaaatat 33000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 35721099 - 35721142
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||    
T  35721099 taggctaaaatatgtttttggtccctgcaaatataacgaatttg 35721142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 50164402 - 50164445
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||    
T  50164402 aggctaaaatatgcttttggtccctgcaaatatggcgagtttga 50164445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 17977619 - 17977577
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||    
T  17977619 aggcttaaatatggttttggtccctgcaaatatagcgaatttg 17977577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 27262907 - 27262949
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||    
T  27262907 aggctaaaatatgtttttggtccctgcaaatatagcgagtttg 27262949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 37395632 - 37395674
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||    
T  37395632 aggctaaaatatgtttttggtccctgcaaatatagcgtatttg 37395674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 21391086 - 21391127
Alignment:
Q  152 atttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||||||| ||||  |||||||||||||    
T  21391086 atttattttaggctaaaatatggttttagtccctgcaaatat 21391127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 30724077 - 30724032
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    ||||||||||||||||||||  |||||||||||||| | |||||||    
T  30724077 ttaggctaaaatatgcttttcgtccctgcaaatataacaaatttga 30724032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 31061152 - 31061119
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatata 194  Q
    ||||||||||||| ||||||||||||||||||||    
T  31061152 aggctaaaatatggttttgatccctgcaaatata 31061119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 10887228 - 10887264
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  10887228 ttttaggctaaaatatggttttggtccctgcaaatat 10887264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 23470028 - 23469992
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcga 198  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  23470028 ggctaaaatatgtttttggtccctgcaaatatagcga 23469992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 48153043 - 48153011
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||| |||||||||||||    
T  48153043 aggctaaaatatgcttttgctccctgcaaatat 48153011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 10315 - 10357
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  10315 ggctaaaatatgcttttggtccctgcaaatatagcgaatttga 10357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 11582 - 11540
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||    
T  11582 aggctaaaatatgtttttggtccctgcaaatatagcgtatttg 11540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 119593 - 119635
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttga 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  119593 ggctaaaatatgcttttggtccctgcaaatatagcgaatttga 119635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 121044 - 121003
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||||||||||| |||||||||||||| ||| ||||    
T  121044 ggctaaaatatgcttttggtccctgcaaatataacgagtttg 121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 15599762 - 15599806
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||    
T  15599762 ttaggctaaaatatgcttttggtccctacaaatatggcgaatttg 15599806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 31540493 - 31540537
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||    
T  31540493 ttaggctaaaatatgtttttggtccctgcaaatataacgaatttg 31540537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 31541681 - 31541641
Alignment:
Q  162 ggctaaaatatgcttttgatccctgcaaatatagcgaattt 202  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  31541681 ggctaaaatatgtttttgatccctgcaaatataacgaattt 31541641  T

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Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 36278076 - 36278112
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| |||||||||||||||||||    
T  36278076 ttttaggctaaaatatggttttgatccctgcaaatat 36278112  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 14809165 - 14809204
Alignment:
Q  164 ctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  14809165 ctaaaatatgtttttgatccctacaaatatagcgaatttg 14809204  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 3936577 - 3936619
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||    
T  3936577 aggctaaaatatgtttttggtccctgcaaatatagcgagtttg 3936619  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 25252635 - 25252677
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatagcga 198  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  25252635 atttttggctaaaatatgtttttgatctctgcaaatatagcga 25252677  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 25316420 - 25316462
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatatagcga 198  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  25316420 atttttggctaaaatatgtttttgatctctgcaaatatagcga 25316462  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 27571189 - 27571147
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||    
T  27571189 aggctaaaatatgattttggtccctgcaaatatagcgagtttg 27571147  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 34911888 - 34911846
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||    
T  34911888 aggctaaaatatgattttggtccctgcaaatatagcgagtttg 34911846  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 38554748 - 38554782
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||| |||||||||||||||||||    
T  38554748 ttaggctaaaatatggttttgatccctgcaaatat 38554782  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 3205159 - 3205130
Alignment:
Q  164 ctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||||||||||||||    
T  3205159 ctaaaatatgcttttgatccctgcaaatat 3205130  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 19565837 - 19565800
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  19565837 attttaggctaaaatatggttttggtccctgcaaatat 19565800  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 35877058 - 35877021
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  35877058 attttaggctaaaatatggttttggtccctgcaaatat 35877021  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 40038492 - 40038525
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||| |||||||||||||||||||    
T  40038492 taggctaaaatatggttttgatccctgcaaatat 40038525  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 3938121 - 3938085
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagc 196  Q
    |||||||||||||||||||  ||||||||||||||||    
T  3938121 taggctaaaatatgcttttagtccctgcaaatatagc 3938085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 3954049 - 3954093
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  3954049 ttaggctaaaatatgtttttggtccttgcaaatatatcgaatttg 3954093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 27459551 - 27459515
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatatagc 196  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  27459551 taggctaaaatatgcttttaatccttgcaaatatagc 27459515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 40764406 - 40764446
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||| ||||||||||||| ||||| |||||||||||||    
T  40764406 tttatttaaggctaaaatatggttttggtccctgcaaatat 40764446  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 202578 - 202620
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatatagcgaatttg 203  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||    
T  202578 aggctaaaatatgcttttggtccctgcaaatataacgagtttg 202620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 192
Target Start/End: Original strand, 29726 - 29759
Alignment:
Q  159 ttaggctaaaatatgcttttgatccctgcaaata 192  Q
    ||||||||||||||||||||| ||||||||||||    
T  29726 ttaggctaaaatatgcttttggtccctgcaaata 29759  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 75353 - 75390
Alignment:
Q  156 attttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  75353 attttaggctaaaatatggttttgctccctgcaaatat 75390  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 2499 - 2532
Alignment:
Q  160 taggctaaaatatgcttttgatccctgcaaatat 193  Q
    |||||||||||||| |||||||||||||||||||    
T  2499 taggctaaaatatggttttgatccctgcaaatat 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 2665 - 2629
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  2665 ttttaggctaaaatatggttttggtccctgcaaatat 2629  T

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Target: scaffold0326 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 4032 - 4072
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||||| ||||  |||||||||||||    
T  4032 tttattttaggctaaaatatggttttagtccctgcaaatat 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 19214 - 19254
Alignment:
Q  153 tttattttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||||||| ||||  |||||||||||||    
T  19214 tttattttaggctaaaatatggttttagtccctgcaaatat 19254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 21695 - 21727
Alignment:
Q  161 aggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||| |||||||||||||||||||    
T  21695 aggctaaaatatggttttgatccctgcaaatat 21727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 223177 - 223141
Alignment:
Q  157 ttttaggctaaaatatgcttttgatccctgcaaatat 193  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  223177 ttttaggctaaaatatggttttggtccctgcaaatat 223141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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