View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1705_high_56 (Length: 320)
Name: NF1705_high_56
Description: NF1705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1705_high_56 |
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Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 30403824 - 30403535
Alignment:
| Q |
17 |
tttgggggaaacaatgtgatggccttcaaagaaagtaaccaaaagataaccctc-ctaacctcctccttaacattcttttctttctccaactatattttt |
115 |
Q |
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| T |
30403824 |
tttgggggaaacaatgtgatggccttcaaagaaagtaaccaaaagataaccctcactaacctcctccttaacattcttttctttctccaactatattttt |
30403725 |
T |
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| Q |
116 |
catatttattctgcaatcggagtaaataaccatttacaataatgaaaataccaatagaaaatgattgaacttctgatattcccccacataaaagatcaag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30403724 |
catatttattctgcaatcggagtaaataaccatttacaataatgaaaataccaatagaaaatgattgaacttctgatattcccccacataaaagatcaag |
30403625 |
T |
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| Q |
216 |
tgtttcaaactagatgctgatcaacaaactaaccactaaatttctgagttggaggtgagttagaaatgcagatgttcccccgacatagtg |
305 |
Q |
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||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30403624 |
tgtttcaaaatagatgcggatcaacaaactaaccactaaagttccgagttggaggtgagttagaaatgcagatgttcccccgacatagtg |
30403535 |
T |
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