View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1705_high_81 (Length: 260)
Name: NF1705_high_81
Description: NF1705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1705_high_81 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 23379793 - 23379562
Alignment:
| Q |
13 |
attctgaaaacaagcagcctgcaccacaaaacttg-actccacaaatctcccataaaagagaatcctgcaaaattgatattaggcaagaagtggctcttt |
111 |
Q |
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| T |
23379793 |
attctgaaaacaagcagcctgcaccacaaatcttggactccacaaatctcccataaaagagaatcctgcaaaattgatagtaggcaagaagtggctcttt |
23379694 |
T |
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| Q |
112 |
taaaaccaaaccagatccaaacaaaaggattaacagatgaagccaccaaagcaacaattttttctgacaatttgagacagaggaagtataattttaatat |
211 |
Q |
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| T |
23379693 |
taaaaccaaaccagatccaaacaaaaggattaacagatgaagccaccaaagcaacaattttttctgacaatttgagaaggaggaagtataattttaatat |
23379594 |
T |
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| Q |
212 |
ttnnnnnnnnggagaatattatgagtgctctt |
243 |
Q |
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|| |||||||||||||||||||||| |
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| T |
23379593 |
ttaaaaaaaaggagaatattatgagtgctctt |
23379562 |
T |
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