View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1705_low_135 (Length: 213)
Name: NF1705_low_135
Description: NF1705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1705_low_135 |
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Alignment Details
Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 3681003 - 3681126
Alignment:
| Q |
74 |
gtcaatgattaactccaatttactcacaaattacaaaggattccctcaccccatcccctcccctcccgtgcnnnnnnnctttcttttacaaacgcatccc |
173 |
Q |
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| T |
3681003 |
gtcaatgattaactccaatttactcacaaattacaaaggattccctcaccccatcccctcccctcccgtgctttttttctttcttttacaaacgcatccc |
3681102 |
T |
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| Q |
174 |
ctcctagttctaatacgcataatg |
197 |
Q |
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|||||||||||||||||||||||| |
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| T |
3681103 |
ctcctagttctaatacgcataatg |
3681126 |
T |
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