View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1705_low_47 (Length: 356)

Name: NF1705_low_47
Description: NF1705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1705_low_47
NF1705_low_47
[»] chr6 (24 HSPs)
chr6 (23-340)||(12270495-12270812)
chr6 (166-336)||(5874112-5874292)
chr6 (133-336)||(10590793-10590997)
chr6 (133-336)||(35040155-35040350)
chr6 (133-340)||(5287842-5288048)
chr6 (133-337)||(10494309-10494522)
chr6 (133-338)||(15859666-15859877)
chr6 (212-336)||(13810885-13811009)
chr6 (133-337)||(10390960-10391163)
chr6 (169-336)||(25136714-25136886)
chr6 (33-123)||(5866933-5867023)
chr6 (212-340)||(33550258-33550386)
chr6 (212-280)||(13801998-13802066)
chr6 (189-336)||(6266846-6266993)
chr6 (189-284)||(9686052-9686147)
chr6 (232-332)||(892377-892477)
chr6 (199-339)||(29048066-29048206)
chr6 (233-284)||(30752525-30752576)
chr6 (197-335)||(24644954-24645091)
chr6 (204-289)||(14940580-14940665)
chr6 (232-265)||(19135148-19135181)
chr6 (232-265)||(22413851-22413884)
chr6 (304-336)||(8135378-8135410)
chr6 (181-289)||(9909057-9909165)
[»] chr2 (26 HSPs)
chr2 (23-339)||(9811330-9811646)
chr2 (23-336)||(36413457-36413780)
chr2 (23-336)||(16578578-16578901)
chr2 (133-336)||(44979709-44979909)
chr2 (133-336)||(18356846-18357048)
chr2 (133-333)||(25298190-25298388)
chr2 (135-336)||(42785565-42785769)
chr2 (167-313)||(11375867-11376013)
chr2 (167-338)||(17916827-17916993)
chr2 (212-338)||(19937141-19937266)
chr2 (212-333)||(44035251-44035373)
chr2 (181-340)||(1330948-1331107)
chr2 (181-338)||(41461022-41461184)
chr2 (40-101)||(42785208-42785269)
chr2 (204-336)||(15320587-15320719)
chr2 (205-338)||(12041598-12041731)
chr2 (232-337)||(17762683-17762788)
chr2 (135-335)||(34910254-34910455)
chr2 (232-336)||(27301520-27301624)
chr2 (232-339)||(5862667-5862774)
chr2 (180-273)||(44085495-44085588)
chr2 (212-334)||(28790450-28790572)
chr2 (189-239)||(6946537-6946587)
chr2 (221-259)||(44986082-44986120)
chr2 (232-273)||(13193904-13193945)
chr2 (248-336)||(12884473-12884561)
[»] chr7 (47 HSPs)
chr7 (23-338)||(11206185-11206500)
chr7 (23-339)||(47069608-47069934)
chr7 (23-336)||(3213039-3213362)
chr7 (23-339)||(47204274-47204600)
chr7 (23-336)||(12117542-12117860)
chr7 (23-336)||(10671763-10672085)
chr7 (188-337)||(8768950-8769104)
chr7 (133-336)||(27054670-27054872)
chr7 (210-325)||(47903201-47903316)
chr7 (133-336)||(18673130-18673330)
chr7 (133-333)||(32823550-32823746)
chr7 (133-336)||(31982933-31983135)
chr7 (23-132)||(8768834-8768943)
chr7 (194-336)||(7209267-7209409)
chr7 (167-336)||(13852251-13852425)
chr7 (133-333)||(31876575-31876766)
chr7 (212-330)||(10069142-10069260)
chr7 (133-325)||(24361433-24361622)
chr7 (215-336)||(5932638-5932759)
chr7 (212-301)||(43429153-43429242)
chr7 (167-333)||(36507892-36508058)
chr7 (133-333)||(1335264-1335466)
chr7 (133-265)||(24361227-24361357)
chr7 (167-332)||(48675058-48675228)
chr7 (212-336)||(2408982-2409106)
chr7 (167-329)||(11216104-11216266)
chr7 (195-334)||(7760049-7760188)
chr7 (232-336)||(32942115-32942219)
chr7 (264-336)||(45898128-45898200)
chr7 (232-331)||(8568590-8568689)
chr7 (234-336)||(7205916-7206018)
chr7 (135-234)||(22366500-22366597)
chr7 (232-289)||(8118316-8118373)
chr7 (236-336)||(29211689-29211788)
chr7 (232-293)||(23729373-23729434)
chr7 (232-336)||(29628050-29628154)
chr7 (232-291)||(26215160-26215219)
chr7 (203-273)||(46147221-46147296)
chr7 (211-284)||(524881-524954)
chr7 (232-261)||(2308151-2308180)
chr7 (232-273)||(27456365-27456406)
chr7 (232-265)||(31287815-31287848)
chr7 (232-273)||(40848856-40848897)
chr7 (241-273)||(4153772-4153804)
chr7 (232-272)||(33434118-33434158)
chr7 (232-272)||(35820123-35820163)
chr7 (232-272)||(48642786-48642826)
[»] chr5 (35 HSPs)
chr5 (23-336)||(27886243-27886556)
chr5 (23-336)||(667441-667754)
chr5 (15-336)||(30001954-30002274)
chr5 (23-336)||(15068403-15068726)
chr5 (23-336)||(11917348-11917671)
chr5 (15-339)||(701159-701493)
chr5 (15-336)||(8408933-8409262)
chr5 (133-336)||(42544601-42544802)
chr5 (133-335)||(30265728-30265930)
chr5 (133-332)||(2226817-2227020)
chr5 (133-336)||(38433640-38433847)
chr5 (133-332)||(333217-333413)
chr5 (133-336)||(12681009-12681204)
chr5 (167-334)||(17085208-17085375)
chr5 (195-336)||(12166163-12166302)
chr5 (133-339)||(9160920-9161131)
chr5 (212-301)||(36177121-36177210)
chr5 (133-268)||(35358947-35359085)
chr5 (212-333)||(36103627-36103749)
chr5 (194-268)||(10174096-10174170)
chr5 (40-133)||(35359344-35359437)
chr5 (264-333)||(23780770-23780839)
chr5 (264-333)||(23867723-23867792)
chr5 (133-254)||(32521154-32521280)
chr5 (232-336)||(27572081-27572185)
chr5 (133-336)||(9988790-9988995)
chr5 (232-339)||(25495024-25495131)
chr5 (197-265)||(36567735-36567803)
chr5 (232-272)||(40692501-40692541)
chr5 (232-291)||(34881360-34881419)
chr5 (232-273)||(2588980-2589021)
chr5 (197-261)||(2422824-2422888)
chr5 (232-272)||(17132126-17132166)
chr5 (232-272)||(32244412-32244452)
chr5 (181-225)||(41454927-41454971)
[»] chr3 (31 HSPs)
chr3 (23-336)||(51149485-51149797)
chr3 (23-336)||(34794537-34794849)
chr3 (23-337)||(35402027-35402346)
chr3 (23-336)||(10369154-10369477)
chr3 (109-336)||(4669550-4669787)
chr3 (23-264)||(33360968-33361219)
chr3 (133-336)||(6004327-6004527)
chr3 (133-336)||(9827719-9827918)
chr3 (133-337)||(32880242-32880445)
chr3 (133-336)||(50562509-50562710)
chr3 (167-334)||(21586814-21586981)
chr3 (23-100)||(4669416-4669493)
chr3 (190-279)||(48032843-48032931)
chr3 (212-337)||(43030358-43030483)
chr3 (232-337)||(26291992-26292097)
chr3 (181-336)||(55467622-55467782)
chr3 (181-339)||(38651974-38652131)
chr3 (217-333)||(39097891-39098010)
chr3 (232-339)||(26758163-26758270)
chr3 (43-97)||(9817756-9817810)
chr3 (232-332)||(17144766-17144865)
chr3 (232-330)||(20846418-20846518)
chr3 (243-338)||(2832446-2832541)
chr3 (253-316)||(35532193-35532256)
chr3 (232-339)||(40483862-40483969)
chr3 (232-291)||(54122008-54122067)
chr3 (181-291)||(45915189-45915298)
chr3 (232-333)||(42363261-42363362)
chr3 (181-225)||(20038443-20038487)
chr3 (181-284)||(51191699-51191807)
chr3 (181-291)||(21238030-21238139)
[»] scaffold0308 (1 HSPs)
scaffold0308 (23-338)||(5710-6025)
[»] chr4 (42 HSPs)
chr4 (23-336)||(36077515-36077828)
chr4 (23-336)||(50570775-50571098)
chr4 (23-336)||(29636716-29637039)
chr4 (23-338)||(42557665-42557989)
chr4 (110-338)||(29644029-29644267)
chr4 (133-338)||(30193914-30194118)
chr4 (133-336)||(40900018-40900223)
chr4 (133-339)||(5261904-5262107)
chr4 (133-336)||(48996027-48996228)
chr4 (133-336)||(40806751-40806958)
chr4 (167-338)||(43630518-43630689)
chr4 (133-336)||(32136635-32136841)
chr4 (133-336)||(6333259-6333465)
chr4 (133-334)||(51394663-51394862)
chr4 (170-337)||(23937492-23937659)
chr4 (133-338)||(52344678-52344876)
chr4 (133-338)||(10218619-10218832)
chr4 (220-338)||(13690872-13690990)
chr4 (204-335)||(48293413-48293544)
chr4 (212-336)||(23120273-23120397)
chr4 (181-340)||(36106399-36106564)
chr4 (137-256)||(8176540-8176657)
chr4 (25-101)||(5261537-5261611)
chr4 (246-338)||(31301236-31301328)
chr4 (183-284)||(45983378-45983479)
chr4 (232-338)||(5122420-5122526)
chr4 (197-291)||(23449985-23450079)
chr4 (25-96)||(51395162-51395231)
chr4 (212-335)||(48338285-48338407)
chr4 (232-336)||(20986364-20986468)
chr4 (232-336)||(32223355-32223459)
chr4 (181-264)||(48602504-48602587)
chr4 (275-340)||(41260211-41260276)
chr4 (197-284)||(41325090-41325172)
chr4 (212-254)||(35233314-35233356)
chr4 (232-273)||(14866782-14866823)
chr4 (212-273)||(15723887-15723948)
chr4 (194-265)||(4688690-4688766)
chr4 (232-272)||(19753557-19753597)
chr4 (232-272)||(19786209-19786249)
chr4 (184-264)||(29232767-29232847)
chr4 (212-256)||(51907085-51907129)
[»] chr8 (30 HSPs)
chr8 (23-338)||(3006390-3006714)
chr8 (23-336)||(5803062-5803386)
chr8 (133-338)||(10661094-10661297)
chr8 (133-333)||(44672734-44672932)
chr8 (133-336)||(36910270-36910471)
chr8 (216-336)||(33068208-33068328)
chr8 (133-333)||(14549169-14549376)
chr8 (137-337)||(18169961-18170161)
chr8 (167-337)||(18633558-18633729)
chr8 (221-332)||(6200878-6200989)
chr8 (171-336)||(3681876-3682035)
chr8 (248-334)||(30392083-30392169)
chr8 (232-339)||(44336711-44336819)
chr8 (181-339)||(28073176-28073334)
chr8 (232-336)||(4785178-4785282)
chr8 (197-273)||(7428434-7428510)
chr8 (189-251)||(38926419-38926481)
chr8 (243-336)||(12883777-12883870)
chr8 (232-336)||(40436378-40436483)
chr8 (232-336)||(11218892-11218996)
chr8 (242-284)||(8036037-8036079)
chr8 (232-333)||(24682126-24682227)
chr8 (212-261)||(31497615-31497664)
chr8 (243-336)||(31497656-31497749)
chr8 (232-273)||(33565962-33566003)
chr8 (197-261)||(12660257-12660321)
chr8 (248-336)||(15272358-15272446)
chr8 (248-336)||(15452727-15452815)
chr8 (232-272)||(36340796-36340836)
chr8 (232-284)||(45366302-45366354)
[»] chr1 (34 HSPs)
chr1 (23-336)||(8211221-8211546)
chr1 (15-337)||(20493690-20494025)
chr1 (23-336)||(5155150-5155483)
chr1 (133-340)||(33474386-33474590)
chr1 (133-336)||(51252354-51252555)
chr1 (133-333)||(1161682-1161879)
chr1 (212-337)||(16529516-16529641)
chr1 (23-138)||(29707928-29708043)
chr1 (212-335)||(32953982-32954104)
chr1 (167-336)||(42789579-42789743)
chr1 (212-336)||(39256652-39256776)
chr1 (167-325)||(29388986-29389149)
chr1 (232-336)||(36203479-36203583)
chr1 (133-336)||(45691739-45691945)
chr1 (133-323)||(44918503-44918690)
chr1 (212-336)||(33910797-33910922)
chr1 (212-331)||(11898958-11899072)
chr1 (184-333)||(27507479-27507628)
chr1 (232-337)||(21685578-21685683)
chr1 (232-337)||(35980423-35980528)
chr1 (232-340)||(40095457-40095565)
chr1 (232-337)||(12973501-12973606)
chr1 (181-291)||(16537822-16537932)
chr1 (232-333)||(32910405-32910506)
chr1 (181-291)||(34914121-34914231)
chr1 (133-223)||(24910987-24911076)
chr1 (232-336)||(8165587-8165691)
chr1 (189-225)||(33769936-33769972)
chr1 (232-337)||(25560035-25560137)
chr1 (199-273)||(50471232-50471311)
chr1 (243-336)||(6248019-6248112)
chr1 (232-273)||(17651757-17651798)
chr1 (167-219)||(33910742-33910794)
chr1 (232-332)||(52828769-52828868)
[»] scaffold0059 (1 HSPs)
scaffold0059 (212-336)||(69556-69680)
[»] scaffold0013 (2 HSPs)
scaffold0013 (133-336)||(128579-128790)
scaffold0013 (212-336)||(105972-106096)
[»] scaffold0029 (1 HSPs)
scaffold0029 (167-336)||(40541-40725)
[»] scaffold0204 (2 HSPs)
scaffold0204 (212-335)||(25807-25929)
scaffold0204 (241-336)||(14465-14560)
[»] scaffold0015 (1 HSPs)
scaffold0015 (232-273)||(62405-62446)
[»] scaffold0688 (2 HSPs)
scaffold0688 (232-316)||(1121-1204)
scaffold0688 (232-316)||(7690-7773)


Alignment Details
Target: chr6 (Bit Score: 264; Significance: 1e-147; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 23 - 340
Target Start/End: Complemental strand, 12270812 - 12270495
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  12270812 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 12270713  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12270712 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 12270613  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  12270612 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgtttgaaaccgaaccaaaccgcac 12270513  T
Q  323 cgcgaacacccctaattt 340  Q
    ||||||||||||||||||    
T  12270512 cgcgaacacccctaattt 12270495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 166 - 336
Target Start/End: Original strand, 5874112 - 5874292
Alignment:
Q  166 atttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattgg----------tttggtttggatgactttttaaaaatcaaccgaaccaaac 255  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  5874112 atttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaac 5874211  T
Q  256 caaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5874212 caaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcaccgcgaacaccccta 5874292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 10590997 - 10590793
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnattt-atctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgact 231  Q
    ||||||||||||||||||||||||||        ||| |||||| ||| |||||||  ||| ||||||||| || |||||||||||||||| ||||||||    
T  10590997 agttggcaatattagagttaatgtaatattttttttttatctcgtgataaaccgcacaaaccgaaccaatccaagccgcattggtttggttgggatgact 10590898  T
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | |||||||  ||||||||||||| |||||||||| |||    
T  10590897 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaccac 10590798  T
Q  332 cccta 336  Q
    |||||    
T  10590797 cccta 10590793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 35040155 - 35040350
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    |||||||||||||||||| |||||||        ||||||||||||| |||||||  ||| ||||||||| ||||||||||||     ||||||||||||    
T  35040155 agttggcaatattagagtcaatgtaatattt---tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattgg-----tttggatgactt 35040246  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | |||||||  ||||||||||||| |||||||||||||||    
T  35040247 tttaaaaatcaaccaaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacacc 35040346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 133 - 340
Target Start/End: Original strand, 5287842 - 5288048
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||| ||||| |||||||  ||| ||||||||| || ||| |||||||| |||||||||||||    
T  5287842 agttggcaatattagagttaatgtaattttttt-tttatcttgcgataaaccgcactaaccgaaccaatccaagccgtattggtttcgtttggatgactt 5287940  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||||||||||||||||| ||||| || ||| |||||| |||||||||| |   |||||  ||||||||||||| |||||||||||||||    
T  5287941 tttaaaaatcaaccgaaccaaaccaaactgcatgtttatttatctcgcagtttggatgacttaaatgctcaaaaccgaaccaaaccgcaccgcgaacacc 5288040  T
Q  333 cctaattt 340  Q
     |||||||    
T  5288041 tctaattt 5288048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 133 - 337
Target Start/End: Original strand, 10494309 - 10494522
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggttt--------- 223  Q
    |||||||||||||| |||||||||||       ||| |||||||||| |||||||||||| |||||||||||| |||||||||||| ||||             
T  10494309 agttggcaatattatagttaatgtaaaaaaaaaatt-atctcgcgataaaccgcatcaaccgaaccaatctaagccgcattggtttagtttggtttagtt 10494407  T
Q  224 -ggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
     ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| | |||||||  ||||| ||||||| |||||    
T  10494408 tggatgactttttaaaaatcaaccgaaccaaatcaaaccccatgcttttttatctcgcggtttggatgacttttatgctcaaaaccaaaccaaaccgcac 10494507  T
Q  323 cgcgaacacccctaa 337  Q
    ||| |||||||||||    
T  10494508 cgcaaacacccctaa 10494522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 133 - 338
Target Start/End: Complemental strand, 15859877 - 15859666
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggt--------ttg 224  Q
    ||||||||||||||||||||||||||        || |||||||||| |||||||  ||| ||||||||| ||||||||||||||||||        |||    
T  15859877 agttggcaatattagagttaatgtaatatttt--ttcatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtggtttggtttg 15859780  T
Q  225 gatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccg 324  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| || | |||||||  |||||||||||||  ||||||    
T  15859779 gatgactatttaaaaatcaaccgaatcaaaccaaaccgcatgctttttaatctcgcggtttggaagacttttatgctcaaaaccgaaccaaacggcaccg 15859680  T
Q  325 cgaacacccctaat 338  Q
    ||||||||||||||    
T  15859679 cgaacacccctaat 15859666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 13810885 - 13811009
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| | || ||||  ||||| ||    
T  13810885 ttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgtatgcttttttatctcgcggtttggatgacttttttgctcaaaaccaaa 13810984  T
Q  312 ccaaatcgcaccgcgaacaccccta 336  Q
    ||||| | |||||||||||||||||    
T  13810985 ccaaacctcaccgcgaacaccccta 13811009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 133 - 337
Target Start/End: Original strand, 10390960 - 10391163
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||| ||| |||||||  | | ||||||||| || || | |||||||||||||||||||||    
T  10390960 agttggcaatattagagttaatgtaatatttt--tttatctcgtgataaaccgcacaagccgaaccaatccaagccacgttggtttggtttggatgactt 10391057  T
Q  233 tttaa-aaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    ||| | |||||||  |||||||||||||| |||||||||||| |||||||||| | |||| | |||||||  ||||||||||||| | ||||||||||||    
T  10391058 ttttagaaatcaagtgaaccaaaccaaacagcatgcttttttatctcgcggttcgaatgacttttatgctcaaaaccgaaccaaaccacaccgcgaacac 10391157  T
Q  332 ccctaa 337  Q
    ||||||    
T  10391158 ccctaa 10391163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 169 - 336
Target Start/End: Complemental strand, 25136886 - 25136714
Alignment:
Q  169 tatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgc 263  Q
    ||||| ||||| |||||||  ||| |||||||||||||| |||||||||||||||||     ||||||||||||||  ||||||||||||||| ||||||    
T  25136886 tatcttgcgataaaccgcacaaaccgaaccaatctaaactgcattggtttggtttggtttggatgactttttaaaatccaaccgaaccaaaccgaaccgc 25136787  T
Q  264 atgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||| | || | |||||||| | |  ||||||  ||||||||||||| ||||||| |||||||||||    
T  25136786 atgcttttttatttcactgtttggatcacttgtatgctcaaaaccgaaccaaaccgcaccgtgaacaccccta 25136714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 5866933 - 5867023
Alignment:
Q  33 gtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaattg 123  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||    
T  5866933 gtactgtaatgttattttagataaataacttttatttgtattgtaatgctattttggaacttcaagttctttttttgaataattaaaattg 5867023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 340
Target Start/End: Complemental strand, 33550386 - 33550258
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||| || | |||||||||||| | |||||||  ||||||||    
T  33550386 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaacatcatgtttttttatccctcggtttggatgacttttatgctcaaaaccgaa 33550287  T
Q  312 ccaaatcgcaccgcgaacacccctaattt 340  Q
     |||| |||| |   ||||||||||||||    
T  33550286 tcaaaccgcatcataaacacccctaattt 33550258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 13801998 - 13802066
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  13801998 ttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgtatgcttttttatctcgc 13802066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 336
Target Start/End: Complemental strand, 6266993 - 6266846
Alignment:
Q  189 caactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttgga 288  Q
    ||||| |||||||| ||| | |||| ||||||||||| |  | |||||||| ||||||| |||||||||||||||||| |||||| | |  ||||| |||    
T  6266993 caactaaaccaatccaaaacacatttgtttggtttggttttcattttaaaagtcaaccgtaccaaaccaaaccgcatgtttttttattttacggttcgga 6266894  T
Q  289 tgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||| |||||  ||  |||||| |||||| |||||||||||||| ||||    
T  6266893 tgactattaacctcaaaaccgtaccaaaccgcaccgcgaacactccta 6266846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 284
Target Start/End: Complemental strand, 9686147 - 9686052
Alignment:
Q  189 caactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtt 284  Q
    ||||||| |||||| ||||||||||||||||||| ||||    |||||||| | ||||||||||||||||||||||| ||| ||| ||| ||||||    
T  9686147 caactgatccaatccaaaccgcattggtttggttcggattttattttaaaagttaaccgaaccaaaccaaaccgcatacttatttatcttgcggtt 9686052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 892377 - 892477
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| | |||||||||||||||||||||||| |||||| | | |||||| |||||| | |||  ||| |||  |||||||| ||||||||||||||    
T  892377 ttttaaaagttaaccgaaccaaaccaaaccgcatgtttttttattttgcggttcggatgacttttagccttaaaattgaaccaaaccgcaccgcgaacac 892476  T
Q  332 c 332  Q
    |    
T  892477 c 892477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 339
Target Start/End: Complemental strand, 29048206 - 29048066
Alignment:
Q  199 aatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattat 298  Q
    |||| ||| ||||||||||| ||| ||||    |||||||| ||||||||||||||||||| ||||  | |||||  ||   ||||||||||| | |||     
T  29048206 aatccaaatcgcattggtttagttcggattttattttaaaagtcaaccgaaccaaaccaaatcgcacacctttttaccttatggtttggatgacttttaa 29048107  T
Q  299 gcttgaaaccgaaccaaatcgcaccgcgaacacccctaatt 339  Q
     ||| ||||||||||||| ||||||||||||| ||||||||    
T  29048106 ccttaaaaccgaaccaaaccgcaccgcgaacatccctaatt 29048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 30752576 - 30752525
Alignment:
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtt 284  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  30752576 tttaaaagtcaaccgaaccaaaccaaaccgcatgcttttttatcttgcggtt 30752525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 335
Target Start/End: Original strand, 24644954 - 24645091
Alignment:
Q  197 ccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattatt 296  Q
    |||||| |||| |||||||||||||||||||    |||||||| |||| |||| ||||||||||||||| ||| ||| ||| |||||| |||||| | ||    
T  24644954 ccaatccaaactgcattggtttggtttggattttattttaaaagtcaa-cgaatcaaaccaaaccgcatacttatttatcttgcggttcggatgactttt 24645052  T
Q  297 atgcttgaaaccgaaccaaatcgcaccgcgaacacccct 335  Q
    |  ||  ||| ||||||||| |||||  |||||||||||    
T  24645053 aacctcaaaatcgaaccaaaccgcacaacgaacacccct 24645091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 289
Target Start/End: Original strand, 14940580 - 14940665
Alignment:
Q  204 aaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggat 289  Q
    ||||||| ||||||||||| ||||    ||| |||| |||||||||||||||||||| ||||| |||||| ||| |||||| ||||    
T  14940580 aaaccgcgttggtttggttcggattttatttaaaaagtcaaccgaaccaaaccaaactgcatgtttttttatcttgcggttcggat 14940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 19135148 - 19135181
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcat 265  Q
    |||||||| |||||||||||||||||||||||||    
T  19135148 ttttaaaagtcaaccgaaccaaaccaaaccgcat 19135181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 22413884 - 22413851
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcat 265  Q
    |||||||| |||||||||||||||||||||||||    
T  22413884 ttttaaaagtcaaccgaaccaaaccaaaccgcat 22413851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 336
Target Start/End: Complemental strand, 8135410 - 8135378
Alignment:
Q  304 aaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||||||||||||| |||||||||||||||||||    
T  8135410 aaaccgaaccaaaacgcaccgcgaacaccccta 8135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 9909165 - 9909057
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    ||||||| ||||||||||||  ||| |||||||||||||||| |  |  | ||||||||  ||||||||||||| || | | ||||||||| | ||| ||    
T  9909165 aaccgcaacaactgaaccaacataagccgcattggtttggttcgactttcattttaaaagccaaccgaaccaaaacatatcacatgcttttctatcttgc 9909066  T
Q  281 ggtttggat 289  Q
    |||| ||||    
T  9909065 ggttcggat 9909057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 23 - 339
Target Start/End: Complemental strand, 9811646 - 9811330
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  9811646 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 9811547  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9811546 gtttggtactagttggcaatattagagttaatgtaaattttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 9811447  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9811446 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcac 9811347  T
Q  323 cgcgaacacccctaatt 339  Q
    |||||||||||||||||    
T  9811346 cgcgaacacccctaatt 9811330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 36413457 - 36413780
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  36413457 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 36413556  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  36413557 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 36413656  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36413657 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 36413756  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  36413757 caaaccgcaccgcgaacaccccta 36413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 16578901 - 16578578
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  16578901 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 16578802  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  16578801 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 16578702  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16578701 tggtttggtttggatgactttttaaaaatcaatcgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 16578602  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||| ||||||||||||||    
T  16578601 caaaccgcatcgcgaacaccccta 16578578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 44979709 - 44979909
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  | | ||||||||| |||||||||||||||||||||||||||||    
T  44979709 agttggcaatattagagttaatgtaatattt---tttatctcgcgataaaccgcacaagccgaaccaatccaaaccgcattggtttggtttggatgactt 44979805  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||  ||||||||||||| |||||||||||||||    
T  44979806 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacacc 44979905  T
Q  333 ccta 336  Q
    ||||    
T  44979906 ccta 44979909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 18357048 - 18356846
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||||||| ||||||||| || |||||||||||||||||| |||||||    
T  18357048 agttggcaatattagagttaatgtaatattttt-tttatctcgcgataaaccgcatcaacagaaccaatccaagccgcattggtttggtttgaatgactt 18356950  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||| || | |||||| ||| ||||||||||| ||| |||||| |||| ||||| | |||||||  ||||||||||||||||||||||||||| |    
T  18356949 tttaaaaattaatcaaaccaatccataccgcatgcttctttatctcgcagtttagatgacttttatgctcaaaaccgaaccaaatcgcaccgcgaacatc 18356850  T
Q  333 ccta 336  Q
    ||||    
T  18356849 ccta 18356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 133 - 333
Target Start/End: Original strand, 25298190 - 25298388
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        || |||||||||| |||||||  ||| ||||||||| |||||| ||| ||||||||||||||||||    
T  25298190 agttggcaatattagagttaatgtaatatttt--ttcatctcgcgataaaccgcacaaaccgaaccaatccaaaccgtattagtttggtttggatgactt 25298287  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||||||||||||| ||||| ||| |||||| |||||| |||| ||||| | |||||||  |||||||||||||  ||||||||||||||    
T  25298288 tttaaaaatcaaccgaaccaaaccgaaccgaatgtttttttatctcgcagtttcgatgacttttatgctcaaaaccgaaccaaactgcaccgcgaacacc 25298387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 135 - 336
Target Start/End: Original strand, 42785565 - 42785769
Alignment:
Q  135 ttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattgg-----tttggtttggatga 229  Q
    ||||||||||||||||||||||||        ||||||||||||| |||||||||||  ||||||||| ||||||||||||     ||||||||| ||||    
T  42785565 ttggcaatattagagttaatgtaatatttt--tttatctcgcgataaaccgcatcaatcgaaccaatccaaaccgcattggtttggtttggtttgaatga 42785662  T
Q  230 ctttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaac 329  Q
     |||||||||||||| |||||||||||||||||||| ||||||| |||| || ||||||||| | |||||||  ||| ||||||||| ||||||||||||    
T  42785663 gtttttaaaaatcaagcgaaccaaaccaaaccgcatccttttttatctcacgatttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcgaac 42785762  T
Q  330 accccta 336  Q
    |||||||    
T  42785763 accccta 42785769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 313
Target Start/End: Complemental strand, 11376013 - 11375867
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    ||||||| ||||| |||||||  ||  ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11376013 tttatcttgcgataaaccgcacaaaacgaatcaatccaatccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatg 11375914  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaacc 313  Q
     |||||| ||||||||||||||||| | |||||||| ||||||||||    
T  11375913 tttttttatctcgcggtttggatgacttttatgcttaaaaccgaacc 11375867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 338
Target Start/End: Original strand, 17916827 - 17916993
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    ||||||||||||| ||| |||  ||| ||||||||| || |||||||||     ||||||||||||||||||||||||||||||||||||||||||||||    
T  17916827 tttatctcgcgataaactgcacaaaccgaaccaatccaagccgcattgg-----tttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 17916921  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaat 338  Q
     |||||| ||||   |||||||| | | |||||||  |||| ||||||||||||||||||||||||||||||    
T  17916922 tttttttatctcaaagtttggataacttttatgctcaaaactgaaccaaatcgcaccgcgaacacccctaat 17916993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 338
Target Start/End: Original strand, 19937141 - 19937266
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||| | |||||||  || || ||    
T  19937141 ttggtttgatttggatgactttttaaaaatcaatcgaaccaaaccaaacc-catgtttttttatctcgcggtttggatgacttttatgctcaaatcctaa 19937239  T
Q  312 ccaaatcgcaccgcgaacacccctaat 338  Q
    ||||| |||||||||||||||||||||    
T  19937240 ccaaaccgcaccgcgaacacccctaat 19937266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 333
Target Start/End: Complemental strand, 44035373 - 44035251
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctt-ttttctctcgcggtttggatgattattatgcttgaaaccga 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | ||||||||||||| | |||||||  |||||||    
T  44035373 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttttattttgcggtttggatgacttttatgctcaaaaccga 44035274  T
Q  311 accaaatcgcaccgcgaacaccc 333  Q
    |||||| ||| | ||||||||||    
T  44035273 accaaaccgccctgcgaacaccc 44035251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 1331107 - 1330948
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    ||||||| ||||||| |||| | ||||| ||||||||||||||||||    |||||||| |||||||||||||||||| | ||||||||||||  || |     
T  1331107 aaccgcaccaactgatccaacccaaaccacattggtttggtttggattttattttaaaagtcaaccgaaccaaaccaatctgcatgcttttttaccttgt 1331008  T
Q  281 ggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaattt 340  Q
    |||| |||||||| ||   ||| |||||||| |||| |||| ||| ||||||||||||||    
T  1331007 ggttcggatgatttttcgtcttaaaaccgaatcaaaccgcatcgcaaacacccctaattt 1330948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 41461184 - 41461022
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggat-gactttt----taaaaatcaaccgaaccaaaccaaaccgcatgcttttttct 275  Q
    ||||||| |||| ||  ||||| |||||||||||||||||||||| | || ||||    ||||| ||||||||||||||||||||||||| |||||||      
T  41461184 aaccgcaccaaccgattcaatccaaaccgcattggtttggtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttttttag 41461085  T
Q  276 ctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaat 338  Q
    || |||||| || ||| | |||  ||  |||||||||||||  ||||||||||||||||||||    
T  41461084 cttgcggttcggttgacttttagtctaaaaaccgaaccaaactgcaccgcgaacacccctaat 41461022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 42785208 - 42785269
Alignment:
Q  40 aatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttc 101  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  42785208 aatgttattttggatagataacttttattggtattgtaatgttattttggaacttcaagttc 42785269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 15320587 - 15320719
Alignment:
Q  204 aaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttg 303  Q
    ||||| |||| |||||||||||||    |||||||||||||| |||||||||| ||| ||||||||||||   || |||||||||||| | |||  ||      
T  15320587 aaaccacattagtttggtttggattttattttaaaaatcaactgaaccaaacctaactgcatgcttttttacttcacggtttggatgacttttagcctca 15320686  T
Q  304 aaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||| ||||||||| |||||||||||||||||||    
T  15320687 aaatcgaaccaaaccgcaccgcgaacaccccta 15320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 338
Target Start/End: Original strand, 12041598 - 12041731
Alignment:
Q  205 aaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttga 304  Q
    |||||||||||||||||| ||||    |||||||| |||||||||||||| ||||||||||| |||||| |||  |||||  ||||| | |||  ||  |    
T  12041598 aaccgcattggtttggttcggattttattttaaaagtcaaccgaaccaaatcaaaccgcatgtttttttatcttacggttcagatgacttttagcctcaa 12041697  T
Q  305 aaccgaaccaaatcgcaccgcgaacacccctaat 338  Q
    |||||||||||| | |||||| ||||||||||||    
T  12041698 aaccgaaccaaaccacaccgcaaacacccctaat 12041731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 17762788 - 17762683
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||| || ||| | |||  ||  ||||| ||| ||| | ||||||||||||    
T  17762788 ttttaaaagtcaaccgaaccaaaccaaaccgcatgtttttttatctcgcggttcggttgacttttagcctcaaaaccaaacaaaaccacaccgcgaacac 17762689  T
Q  332 ccctaa 337  Q
    ||||||    
T  17762688 ccctaa 17762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 335
Target Start/End: Complemental strand, 34910455 - 34910254
Alignment:
Q  135 ttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttg---gatgact 231  Q
    ||||||||||||||||||||||||        |||||||||| || ||||| |  ||| |||| |||| || ||||||||||||||||||   |||||||    
T  34910455 ttggcaatattagagttaatgtaatgttttt-tttatctcgcaataaaccgtacaaaccgaactaatccaagccgcattggtttggtttgaatgatgact 34910357  T
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgca----tgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
    |||||||||||     ||| |||||||||||||    |  |||||| |||||||||||| |||||| |||||||  |||| ||||||||  ||||||| |    
T  34910356 ttttaaaaatc-----aacaaaaccaaaccgcatatgtttttttttatctcgcggtttgaatgatttttatgctcaaaactgaaccaaactgcaccgcaa 34910262  T
Q  328 acacccct 335  Q
    ||||||||    
T  34910261 acacccct 34910254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 27301520 - 27301624
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||  |||||  | |||  ||  |||||||||||||  ||| |||||||||    
T  27301520 ttttaaaagtcaaccgaatcaaaccaaaccgcatgcttttttatcttgcggtccggatggcttttaatctcaaaaccgaaccaaactgcagcgcgaacac 27301619  T
Q  332 cccta 336  Q
    |||||    
T  27301620 cccta 27301624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 5862667 - 5862774
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| ||||||||||||||||||||||||| ||||||| | | ||| ||| ||||| | |||  ||  ||| | || |||| ||||||||||||||    
T  5862667 ttttaaaagtcaaccgaaccaaaccaaaccgcatacttttttattttgcgatttagatgacttttaccctcaaaatcaaatcaaaccgcaccgcgaacac 5862766  T
Q  332 ccctaatt 339  Q
    ||||||||    
T  5862767 ccctaatt 5862774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 44085588 - 44085495
Alignment:
Q  180 taaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| |||| || |||| | |||||||||||||||| ||  |||    |||| ||| |||||||||||||||||||||||||||||||||    
T  44085588 taaccgcaccaaccgatccaacccaaaccgcattggtttgattcagattttatttttaaagtcaaccgaaccaaaccaaaccgcatgctttttt 44085495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 334
Target Start/End: Complemental strand, 28790572 - 28790450
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||||||||||||    |||||||| ||||||||| | || |||||||||||||||||| ||| ||||||  ||||| | |||   |  |||| |||    
T  28790572 ttggtttggtttggattttattttaaaagtcaaccgaatctaatcaaaccgcatgcttttttatcttgcggttcagatgacttttaacatcaaaactgaa 28790473  T
Q  312 ccaaatcgcaccgcgaacacccc 334  Q
    ||||| |||||| ||||||||||    
T  28790472 ccaaaccgcaccacgaacacccc 28790450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 6946537 - 6946587
Alignment:
Q  189 caactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaa 239  Q
    |||| |||||||||||| ||||||||||| |||| |||| |||||||||||    
T  6946537 caaccgaaccaatctaagccgcattggttgggttcggataactttttaaaa 6946587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 44986082 - 44986120
Alignment:
Q  221 tttggatgactttttaaaaatcaaccgaaccaaaccaaa 259  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  44986082 tttggatgactttttaaaagtcaatcgaaccaaaccaaa 44986120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 13193945 - 13193904
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| |||||||||||||||||||| | ||||||||||    
T  13193945 ttttaaaagtcaaccgaaccaaaccaaacagtatgctttttt 13193904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 336
Target Start/End: Complemental strand, 12884561 - 12884473
Alignment:
Q  248 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||||||||||| |||||||  |  || |||||||||| | |||  ||| ||| ||||||||| |||||||| |||| |||||    
T  12884561 aaccaaaccaaaccgcatacttttttaccatgcagtttggatgacttttaaccttaaaatcgaaccaaaccgcaccgcaaacatcccta 12884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 23 - 338
Target Start/End: Original strand, 11206185 - 11206500
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  11206185 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 11206284  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11206285 gtttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 11206384  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11206385 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcac 11206484  T
Q  323 cgcgaacacccctaat 338  Q
    ||||||||||||||||    
T  11206485 cgcgaacacccctaat 11206500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 23 - 339
Target Start/End: Complemental strand, 47069934 - 47069608
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  47069934 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 47069835  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  47069834 gtttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 47069735  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47069734 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 47069635  T
Q  313 caaatcgcaccgcgaacacccctaatt 339  Q
    |||| ||||||||||||||||||||||    
T  47069634 caaaccgcaccgcgaacacccctaatt 47069608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 3213039 - 3213362
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  3213039 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 3213138  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttgg-- 220  Q
    |||||||||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  3213139 gcttggtactagttggcaatattagacttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 3213238  T
Q  221 --------tttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3213239 tggtttgatttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 3213338  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  3213339 caaaccgcaccgcgaacaccccta 3213362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 23 - 339
Target Start/End: Original strand, 47204274 - 47204600
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  47204274 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 47204373  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||  ||||||||          |    
T  47204374 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaattcaaaccgcattgatttggtt 47204473  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47204474 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattgttatgcttgaaaccgaac 47204573  T
Q  313 caaatcgcaccgcgaacacccctaatt 339  Q
    |||| ||||||||||||||||||||||    
T  47204574 caaaccgcaccgcgaacacccctaatt 47204600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 12117860 - 12117542
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  12117860 tattattttggtactgtaatgttattttagataaataatttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 12117761  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12117760 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 12117661  T
Q  223 tgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaat 317  Q
    |||     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  12117660 tggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatgcttttttctctcgcggtttggatgattattatacttgaaaccgaaccaaac 12117561  T
Q  318 cgcaccgcgaacaccccta 336  Q
    |||||||| ||||||||||    
T  12117560 cgcaccgcaaacaccccta 12117542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 10672085 - 10671763
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||||    
T  10672085 tattattttagtactgtaatgttattttagataaataacttttattggtattgtaatgctattttgg-acttcaagttctttttttgaataattaaaatt 10671987  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||||||||| ||||||||          |    
T  10671986 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaactgcatcaactgaaccaatccaaaccgcattggtttggtt 10671887  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10671886 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 10671787  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  10671786 caaaccgcaccgcgaacaccccta 10671763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 188 - 337
Target Start/End: Original strand, 8768950 - 8769104
Alignment:
Q  188 tcaactgaaccaatctaaaccgca-----ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcgg 282  Q
    ||||||||||||||| ||||||||     || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8768950 tcaactgaaccaatccaaaccgcattagtttcgtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcgg 8769049  T
Q  283 tttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaa 337  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  8769050 tttggatgattattatacttgaaaccgaaccaaaccgcaccgcgaacacccctaa 8769104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 27054670 - 27054872
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    |||||| |||||||||||||||||||        ||||||||| ||| |||||||  ||| ||||||||| ||||||||||||||||||||||||| |||    
T  27054670 agttggaaatattagagttaatgtaatattttt-tttatctcgtgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatggctt 27054768  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||||  ||||| ||||||| |||||||| ||||||    
T  27054769 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttttgctcaaaaccaaaccaaaccgcaccgcaaacacc 27054868  T
Q  333 ccta 336  Q
    ||||    
T  27054869 ccta 27054872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 47903316 - 47903201
Alignment:
Q  210 cattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccg 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  47903316 cattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgatttttatgcttaaaaccg 47903217  T
Q  310 aaccaaatcgcaccgc 325  Q
    ||||||| ||||||||    
T  47903216 aaccaaaccgcaccgc 47903201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 18673130 - 18673330
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||| ||||||||||||||||||||        ||||||||||||| ||||||| |||| ||||||||| || || ||||| |||||||||||||||||    
T  18673130 agttgtcaatattagagttaatgtaatattt---tttatctcgcgataaaccgcaccaaccgaaccaatccaagccacattgttttggtttggatgactt 18673226  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||| ||| ||||| |||| |||||||| | ||||||||||| ||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||    
T  18673227 tttgaaattcaactgaactaaaccaaatcacatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaatcgcaccgcgaacacc 18673326  T
Q  333 ccta 336  Q
    ||||    
T  18673327 ccta 18673330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 133 - 333
Target Start/End: Complemental strand, 32823746 - 32823550
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| ||||||||||| |||||||||||||||||    
T  32823746 agttggcaatattagagttaatgtaatattt---tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattgatttggtttggatgactt 32823650  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| | |||||||  ||| |||||||||  |||||| || ||||    
T  32823649 tttaaaaatcaaccgaacc-aaccaaaccgcatgcttttttatctcgcgatttggatgacttttatgctaaaaatcgaaccaaacagcaccgtgagcacc 32823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 31982933 - 31983135
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        |||||||||| || ||||||| |||| ||||||||| || || | |||||||||||||||||||||    
T  31982933 agttggcaatattagagttaatgtaatatatttttttatctcgcaataaaccgcaccaaccgaaccaatccaacccacgttggtttggtttggatgactt 31983032  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||| |||||||||||||| ||||  |||||| ||||||||||||||| | | |||||||  |||||||||| || |||||||||||||||    
T  31983033 tttaaaaatcaactgaaccaaaccaaactgcatatttttttatctcgcggtttggataacttttatgctcaaaaccgaacc-aaccgcaccgcgaacacc 31983131  T
Q  333 ccta 336  Q
    ||||    
T  31983132 ccta 31983135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 8768834 - 8768943
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  8768834 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 8768933  T
Q  123 gcttggtact 132  Q
    ||||||||||    
T  8768934 gcttggtact 8768943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 336
Target Start/End: Original strand, 7209267 - 7209409
Alignment:
Q  194 gaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgatt 293  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |    
T  7209267 gaaccaatccaagacgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgtatgcttttttatctcgtggtttggatgact 7209366  T
Q  294 attatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
     ||||  |  ||||||||||||| ||||| |||||||||||||    
T  7209367 tttatattcaaaaccgaaccaaaccgcactgcgaacaccccta 7209409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 336
Target Start/End: Complemental strand, 13852425 - 13852251
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaacc 261  Q
    ||||||||| ||| |||| ||  ||| ||||||||| ||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  13852425 tttatctcgtgataaacctcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 13852326  T
Q  262 gcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||||| |||||| |||||||||| | |||||||  ||||||||||||| | ||| || ||||||||||    
T  13852325 gcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccacactgcaaacaccccta 13852251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 133 - 333
Target Start/End: Original strand, 31876575 - 31876766
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  || |||||||||| ||||||||||||||||      |||||||    
T  31876575 agttggcaatattagagttaatgtaatattt---tttatctcgcgataaaccgcacaaattgaaccaatccaaaccgcattggtttga-----atgactt 31876666  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||| | |||||||  |||||||| |||| |||||||||||||||    
T  31876667 tttaaaaatcaaccgaaccgaaccaaactgcatgcttttttatttcgcggtttggatgacttttatgctcaaaaccgaa-caaaccgcaccgcgaacacc 31876765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 10069260 - 10069142
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||||| | ||||||||| ||||| | |||||||  ||||||||    
T  10069260 ttggtttggtttgaatgactttttaaaaatcaaccgaatcaaaccaaacagcatgtttttttatatcgcggtttagatgacttttatgctcaaaaccgaa 10069161  T
Q  312 ccaaatcgcaccgcgaaca 330  Q
    ||||| |||||||||||||    
T  10069160 ccaaaccgcaccgcgaaca 10069142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 133 - 325
Target Start/End: Original strand, 24361433 - 24361622
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||| ||||||||||||||||||||        ||||||||  ||| |||||||  ||| ||||||||| |||||||||||||||||||||||||| ||    
T  24361433 agttgacaatattagagttaatgtaatatttt--tttatctcatgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatgattt 24361530  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgc 325  Q
    ||| ||||||||| ||||||||||||||| |||| |||||| |||| |||||| ||||| | || | ||  ||||||||||||| ||||||||    
T  24361531 ttttaaaatcaactgaaccaaaccaaaccacatgtttttttatctcacggtttagatgact-tttttctcaaaaccgaaccaaaccgcaccgc 24361622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 5932759 - 5932638
Alignment:
Q  215 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaacca 314  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||||||||  ||||| | |||||||  |||||||| ||    
T  5932759 gtttggtttggatgactttttaaaaatcaacttaaccaaaccaaaccgcatgctttcttatctcgcggttcagatgacttttatgctcaaaaccgaatca 5932660  T
Q  315 aatcgcaccgcgaacaccccta 336  Q
    || |||||||| |||| |||||    
T  5932659 aaccgcaccgcaaacatcccta 5932638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 43429242 - 43429153
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgct 301  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||| | |||||||    
T  43429242 ttggttttgtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcgtgcatttttatctcgcggtttggatgacttttatgct 43429153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 333
Target Start/End: Complemental strand, 36508058 - 36507892
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    |||||||| |||| |||  || |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  36508058 tttatctcacgataaacgacaccaaccgaaccaatccaagccgcattggtttggtttggatgactttttaaaaatcaaccgaatcaaatcaaactgcatg 36507959  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccc 333  Q
     |||| | |||| |  ||||||||| | | |||||| || | |||||||| | ||||| ||||||||    
T  36507958 attttctatctcacaatttggatgactttaatgcttaaatctgaaccaaaccacaccgtgaacaccc 36507892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 333
Target Start/End: Complemental strand, 1335466 - 1335264
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattg-----gtttggtttggat 227  Q
    ||||||||||||||||||||||||||        |||| || ||||| ||||||| |||| |||| |||| || ||||||||     ||||||||||||     
T  1335466 agttggcaatattagagttaatgtaatatttt--tttaacttgcgataaaccgcaccaaccgaactaatccaagccgcattgatttggtttggtttggag 1335369  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
    ||||||||||||||||||||||||||||||||||   ||||||||| |||||  | |||||||| | |||||||  |||||||||||||  ||| |||||    
T  1335368 gactttttaaaaatcaaccgaaccaaaccaaaccaggtgcttttttatctcgtag-ttggatgacttttatgctcaaaaccgaaccaaactgcaacgcga 1335270  T
Q  328 acaccc 333  Q
    ||||||    
T  1335269 acaccc 1335264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 265
Target Start/End: Original strand, 24361227 - 24361357
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||| ||||||||||||||||||||        ||||||||| ||| |||||||  ||| ||||||||| |||||||||| ||||||||||||||| ||    
T  24361227 agttgacaatattagagttaatgtaatatttt--tttatctcgtgataaaccgcacaaaccgaaccaatccaaaccgcattagtttggtttggatgattt 24361324  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcat 265  Q
    |||  |||| |||||||||||||||||||||||    
T  24361325 tttttaaattaaccgaaccaaaccaaaccgcat 24361357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 332
Target Start/End: Complemental strand, 48675228 - 48675058
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaacc 261  Q
    ||||||||||||| |||||||  ||| ||||| ||| || |||||||| ||||||||||     ||||||| ||||||||||||||||||||| ||||||    
T  48675228 tttatctcgcgataaaccgcacaaaccgaaccgatccaagccgcattgatttggtttggcttggatgacttcttaaaaatcaaccgaaccaaatcaaacc 48675129  T
Q  262 gcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
     | ||||||||| ||| ||||||||| |||   |||||    |||||||| |||| |||| ||||||||||    
T  48675128 acgtgcttttttatcttgcggtttgggtgaaatttatgtccaaaaccgaagcaaaccgcatcgcgaacacc 48675058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 2408982 - 2409106
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||| ||||| || ||||||||||||||||  ||| |||||||||||||||| |||||| |||| |||||||||||| | |||||||  |||   ||    
T  2408982 ttggtttagtttgaataactttttaaaaatcaattgaatcaaaccaaaccgcatggttttttatctcacggtttggatgacttttatgctcaaaattaaa 2409081  T
Q  312 ccaaatcgcaccgcgaacaccccta 336  Q
    ||||| ||||| ||||| |||||||    
T  2409082 ccaaaccgcactgcgaataccccta 2409106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 167 - 329
Target Start/End: Complemental strand, 11216266 - 11216104
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    ||||||||||||| ||| || |||| |||||||||  |||| |||||| |||||||||||  |||||||||||||||| | ||  ||| |||||| ||||    
T  11216266 tttatctcgcgataaactgcgtcaattgaaccaattcaaactgcattgatttggtttggacaactttttaaaaatcaatcaaattaaatcaaaccacatg 11216167  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaac 329  Q
     |||||| |||| | ||| | |||||| |||||||  ||| |||||||||  ||||| |||||    
T  11216166 tttttttatctcacagttcgaatgatttttatgctcaaaatcgaaccaaactgcaccacgaac 11216104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 334
Target Start/End: Complemental strand, 7760188 - 7760049
Alignment:
Q  195 aaccaatctaaaccgcattggtttggtttg-----gatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggat 289  Q
    |||||||| || ||||||||||||| ||||     ||||||||||||||||||||||     ||||||||| | || ||||||| |||| | ||||||||    
T  7760188 aaccaatccaagccgcattggtttgatttgatttagatgactttttaaaaatcaacc-----aaaccaaactggatacttttttatctcacagtttggat 7760094  T
Q  290 gattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccc 334  Q
    |||| |||||||  ||| ||||||||| | |||||||||||||||    
T  7760093 gatttttatgctcaaaatcgaaccaaaccacaccgcgaacacccc 7760049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 32942115 - 32942219
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| ||||||||| |||||||||||||||| |||||| ||| || ||| |||||| | |||  ||  |||||||||||||  |||||||||||||    
T  32942115 ttttaaaagtcaaccgaatcaaaccaaaccgcatgtttttttatcttgcagttcggatgacttttaacctcaaaaccgaaccaaactgcaccgcgaacac 32942214  T
Q  332 cccta 336  Q
    |||||    
T  32942215 cccta 32942219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 45898128 - 45898200
Alignment:
Q  264 atgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||| ||||||||||||||||| | ||||||   ||||||||||||| |||||||||||||||||||    
T  45898128 atgcttttttatctcgcggtttggatgacttttatgcacaaaaccgaaccaaaccgcaccgcgaacaccccta 45898200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 8568590 - 8568689
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| ||||||||||| ||||||||||||| ||| ||| ||| |||||| |||||| | |||  ||  ||||||||||||| ||||||||||||||    
T  8568590 ttttaaaagtcaaccgaaccgaaccaaaccgcatacttatttatcttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 8568689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 336
Target Start/End: Original strand, 7205916 - 7206018
Alignment:
Q  234 ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccc 333  Q
    |||||||||||| |||  ||| ||||||||||| |||||| ||||||||||||||||| |  |||| |  ||||||||||||| | ||| ||||||||||    
T  7205916 ttaaaaatcaacagaataaaaacaaaccgcatgtttttttatctcgcggtttggatgacttctatgttcaaaaccgaaccaaaccacactgcgaacaccc 7206015  T
Q  334 cta 336  Q
    |||    
T  7206016 cta 7206018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 22366597 - 22366500
Alignment:
Q  135 ttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttt 234  Q
    ||||||||||||||||||||||||        ||||||| ||||| |||||||  |||  |||||||| || ||||||||||||||||||||||||||||    
T  22366597 ttggcaatattagagttaatgtaatttttt--tttatcttgcgataaaccgcacaaaccaaaccaatccaagccgcattggtttggtttggatgactttt 22366500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 8118316 - 8118373
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggat 289  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||| |||||| ||||    
T  8118316 tttttaaaatcaaccgaaccaaaccaaaccacatgcttttttatcttgcggttcggat 8118373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 29211689 - 29211788
Alignment:
Q  236 aaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccct 335  Q
    ||||||| ||||||| ||||||||| ||| | |||||| ||| || ||| | |||| | |||  ||| ||||||||||||||||||||||||||||||||    
T  29211689 aaaaatcgaccgaacgaaaccaaactgcaag-ttttttatcttgcagttcgaatgagttttagccttaaaaccgaaccaaatcgcaccgcgaacacccct 29211787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 23729434 - 23729373
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgatt 293  Q
    |||||||| ||||||||   |||||||||||||||||||||| ||| |||||| ||||||||    
T  23729434 ttttaaaagtcaaccgagttaaaccaaaccgcatgcttttttatcttgcggttcggatgatt 23729373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 29628154 - 29628050
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| ||| |||||||||| ||||||||||| ||||||  || |||||| ||||   | ||   ||  ||||||||||||| ||||||||||||||    
T  29628154 ttttaaaattcagccgaaccaaatcaaaccgcatgtttttttaccttgcggttcggataccttttcacctcaaaaccgaaccaaaccgcaccgcgaacac 29628055  T
Q  332 cccta 336  Q
    |||||    
T  29628054 cccta 29628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 26215160 - 26215219
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatga 291  Q
    |||||||| ||||||||||||||| || ||| ||||||| || ||| |||||||||||||    
T  26215160 ttttaaaagtcaaccgaaccaaacaaacccgtatgctttattatcttgcggtttggatga 26215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 273
Target Start/End: Complemental strand, 46147296 - 46147221
Alignment:
Q  203 taaaccgcattggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    ||||||||||||||||||||||| |  || |||   |||||| |||||| ||||||||||| ||||||||||||||    
T  46147296 taaaccgcattggtttggtttggttcagattttattttaaaagtcaaccaaaccaaaccaatccgcatgctttttt 46147221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 524881 - 524954
Alignment:
Q  211 attggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtt 284  Q
    |||||||||||||||||    |||||||| |||| |||| |||||||||||||||  |||||| ||| ||||||    
T  524881 attggtttggtttggattttattttaaaagtcaatcgaatcaaaccaaaccgcatatttttttatcttgcggtt 524954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 261
Target Start/End: Original strand, 2308151 - 2308180
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaacc 261  Q
    ||||||||||||||||||||||||||||||    
T  2308151 ttttaaaaatcaaccgaaccaaaccaaacc 2308180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 27456406 - 27456365
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| ||||| |||| ||||||||||||||||||||||    
T  27456406 ttttaaaagtcaacagaactaaaccaaaccgcatgctttttt 27456365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 31287815 - 31287848
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcat 265  Q
    |||||||| |||||||||||||||||||||||||    
T  31287815 ttttaaaagtcaaccgaaccaaaccaaaccgcat 31287848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 40848897 - 40848856
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| |||||||||||||||||||||| ||| ||||||    
T  40848897 ttttaaaagtcaaccgaaccaaaccaaaccgtatgttttttt 40848856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 4153772 - 4153804
Alignment:
Q  241 tcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    ||||||||||||||||| |||||||||||||||    
T  4153772 tcaaccgaaccaaaccataccgcatgctttttt 4153804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 33434158 - 33434118
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    ||||||||||||||  ||||||||||||||||||| |||||    
T  33434158 ttttaaaaatcaacaaaaccaaaccaaaccgcatgtttttt 33434118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 35820123 - 35820163
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  35820123 ttttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 35820163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 48642826 - 48642786
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||| ||| |||||||||||||||||||||||||| |||||    
T  48642826 tttttaaagtcaaccgaaccaaaccaaaccgcatgtttttt 48642786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 27886243 - 27886556
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  27886243 tattattttggtaatgtaatgttattttagataaataatttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 27886342  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    |||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27886343 gcttggtactggttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 27886442  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27886443 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcac 27886542  T
Q  323 cgcgaacaccccta 336  Q
    ||||||||||||||    
T  27886543 cgcgaacaccccta 27886556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 667441 - 667754
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||    
T  667441 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttttttttttgaataattaaaatt 667540  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  667541 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgatttactgcatcaactgaaccaatccaaaccgcattggtttggtt 667640  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  667641 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgtatgtttttctctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcac 667740  T
Q  323 cgcgaacaccccta 336  Q
    ||||||||||||||    
T  667741 cgcgaacaccccta 667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 15 - 336
Target Start/End: Complemental strand, 30002274 - 30001954
Alignment:
Q  15 tatccacctattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataa 114  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||    
T  30002274 tatccagctattattttggttctgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaaattctttttttgaataa 30002175  T
Q  115 ttaaaattgcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattg 214  Q
    |||||||||||||||||||||||||||||||| |||||||||||       |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  30002174 ttaaaattgcttggtactagttggcaatatta-agttaatgtaatttttttatttatctcgtgattaaccgcatcaactgaaccaatccaaaccgcattg 30002076  T
Q  215 gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaacca 314  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30002075 gtttggtttggatgactttttaaaaaacaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggattattattatgcttgaaaccgaacca 30001976  T
Q  315 aatcgcaccgcgaacaccccta 336  Q
    || ||||||||||||| |||||    
T  30001975 aaccgcaccgcgaacaacccta 30001954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 15068726 - 15068403
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  15068726 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 15068627  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  15068626 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 15068527  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15068526 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttctctcgcggtttggatgattattatgcttaaaaccgaac 15068427  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  15068426 caaaccgcaccgcgaacaccccta 15068403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 11917671 - 11917348
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  11917671 tattattttggtagtgtaattttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 11917572  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    |||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  11917571 gcttggtactagttggcaatattagagtaaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 11917472  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11917471 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 11917372  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  11917371 caaaccgcaccgcgaacaccccta 11917348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 339
Target Start/End: Complemental strand, 701493 - 701159
Alignment:
Q  15 tatccacctattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataa 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||       ||||||    
T  701493 tatccagctattattttggtactgtaatgttattttagataaataacttttattggtattgcaatgctattttggaacttcaagttctttttttgaataa 701394  T
Q  115 ttaaaattgcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca--- 211  Q
    |||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||       
T  701393 ttaaaattgcttggtactagttggcaatatta-agttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattg 701295  T
Q  212 -------ttggtttggtttggatgacttttt-aaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttg 303  Q
           |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  701294 atttggtttggtttggtttggatgactttttaaaaaatcaaccgaaccaaaccaaaccacatgtttttttctctcgcggtttggatgattattatgcttg 701195  T
Q  304 aaaccgaaccaaatcgcaccgcgaacacccctaatt 339  Q
    ||||||||||||| |||||||| |||||||||||||    
T  701194 aaaccgaaccaaaccgcaccgcaaacacccctaatt 701159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 336
Target Start/End: Complemental strand, 8409262 - 8408933
Alignment:
Q  15 tatccacctattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataa 114  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||    
T  8409262 tatccagctattattttggtactttaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttt-aataa 8409164  T
Q  115 ttaaaattgcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattg 214  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8409163 ttaaaattgattggtactggttggcaatatta-agttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattg 8409065  T
Q  215 gtttggtttggat----------gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttga 304  Q
    ||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8409064 gtttggtttggtttggtttgggtgactttttaaaaatcaaccgaaccaaaccaaaccgcatacttttttctctcgcggtttggatgattattatgcttga 8408965  T
Q  305 aaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||||| |||||||||||||||||||    
T  8408964 aaccgaaccaaaccgcaccgcgaacaccccta 8408933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 42544802 - 42544601
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| |||||||||||||||||||||||||||||    
T  42544802 agttggcaatattagagttaatgtaatatttt--tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatgactt 42544705  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | || ||||  |||||||| |||| | ||||||||||| |    
T  42544704 cttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttagatgacttttttgctcaaaaccgaagcaaaccacaccgcgaacaac 42544605  T
Q  333 ccta 336  Q
    ||||    
T  42544604 ccta 42544601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 133 - 335
Target Start/End: Original strand, 30265728 - 30265930
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| |||| |||  || ||||||||||||||||| ||||||||    
T  30265728 agttggcaatattagagttaatgtaatttttttttttatctcgcgatgaaccgcacaaaccgaactaattcaagccgcattggtttggttttgatgactt 30265827  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||| ||||||| ||||||| |||||||  ||||| ||||||| |||||||||||||||    
T  30265828 tttaaaaatcaaccgaaccaaaccaaactgcatgtttttttatcttgcggtttagatgatttttatgctcaaaaccaaaccaaaccgcaccgcgaacacc 30265927  T
Q  333 cct 335  Q
    |||    
T  30265928 cct 30265930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 133 - 332
Target Start/End: Original strand, 2226817 - 2227020
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcatt-----ggtttggtttggat 227  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| ||||||||||     ||||||||||||||    
T  2226817 agttggcaatattagagttaatgtaatattttt-tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattagattggtttggtttggat 2226915  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
    || ||||||||||||||||||||||||||||||| | | ||||||| |||||||||||||||| || |||||||  ||||||||||||| | | ||||||    
T  2226916 gagtttttaaaaatcaaccgaaccaaaccaaaccacgttcttttttatctcgcggtttggatgttttttatgctcaaaaccgaaccaaaccactccgcga 2227015  T
Q  328 acacc 332  Q
    |||||    
T  2227016 acacc 2227020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 38433847 - 38433640
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggat----- 227  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| || ||||||||||||||||||| |         
T  38433847 agttggcaatattagagttaatgtaatattttt-tttatctcgcgataaaccgcacaaaccgaaccaatccaagccgcattggtttggtttggtttggag 38433749  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||| | |||||||  ||||||||| |||  |||||| ||    
T  38433748 gactttttaaaaatcaaccgaaccaaactaaaccgcatgattttttatctcgcggtttgaatgacttttatgctcaaaaccgaactaaactgcaccgtga 38433649  T
Q  328 acaccccta 336  Q
    |||||||||    
T  38433648 acaccccta 38433640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 332
Target Start/End: Original strand, 333217 - 333413
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||| ||||||||||||||||||||        ||||||||||||| |||||||  |||  |||||||  || | ||||||||||||||||||||||||    
T  333217 agttgacaatattagagttaatgtaatattt---tttatctcgcgataaaccgcacaaaccaaaccaattcaagctgcattggtttggtttggatgactt 333313  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||| |||||||||||||  ||||||||||| | ||||||||||||||||| | |||||||  ||| ||||||||| |||||||| ||||||    
T  333314 tttaaaaatcaatcgaaccaaaccaattcgcatgcttttctatctcgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcaaacacc 333413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 12681009 - 12681204
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        |||||||| |||| ||| |||  |||  |||||||| |||||||||||||||||||||||||| ||    
T  12681009 agttggcaatattagagttaatgtaatattt---tttatctcacgataaactgcacaaacctaaccaatccaaaccgcattggtttggtttggatgaatt 12681105  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||||||||||||||     ||||||||||| ||||||||| || |||| | |||||||  ||||||||| ||| |||||||||||||||    
T  12681106 tttaaaaatcaaccgaaccaaacca-----catgcttttttatctcgcggtctgaatgacttttatgctcaaaaccgaactaaaccgcaccgcgaacacc 12681200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 334
Target Start/End: Original strand, 17085208 - 17085375
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    |||||||| |||| || |||| |||| |||| |||| || || |||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||    
T  17085208 tttatctcacgataaatcgcaccaaccgaacgaatccaagccacattggtttgattgggatgactttttaaaaatcaaccgaaccaaactaaatcgcatg 17085307  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccc 334  Q
    ||||||| ||||| ||||||||||| | |||||||  |||| |||||||| |||||||| ||||||||    
T  17085308 cttttttatctcgtggtttggatgacttttatgctcaaaactgaaccaaaccgcaccgcaaacacccc 17085375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 195 - 336
Target Start/End: Original strand, 12166163 - 12166302
Alignment:
Q  195 aaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgatta 294  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||| |     
T  12166163 aaccaatccaagccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatgcttttttatctcgcgattttgatgactt 12166262  T
Q  295 ttatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||| | |||||||||| || || ||| ||||||||||||    
T  12166263 ttatgc-tcaaaccgaacc-aaccgtacctcgaacaccccta 12166302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 339
Target Start/End: Complemental strand, 9161131 - 9160920
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg-----at 227  Q
    ||||||||||||||||||||||||||        ||||||| ||||| |||||||  ||| ||||||||| ||||||||||||||||||||||     ||    
T  9161131 agttggcaatattagagttaatgtaatattt---tttatcttgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggat 9161035  T
Q  228 gactttttaaaaatcaaccgaaccaaacca-----aaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    ||||||||||||||||||||||||||||||     |||||||||| ||||| |||||||||||| |||| | || | ||  ||||||||||||| |||||    
T  9161034 gactttttaaaaatcaaccgaaccaaaccaaaccaaaccgcatgc-tttttatctcgcggtttgaatgact-tttttctcaaaaccgaaccaaaccgcac 9160937  T
Q  323 cgcgaacacccctaatt 339  Q
    |||||||||| ||||||    
T  9160936 cgcgaacacctctaatt 9160920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 36177121 - 36177210
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgct 301  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||    
T  36177121 ttggttttgtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcatttttatctcgcggtttggatgacttttatgct 36177210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 268
Target Start/End: Complemental strand, 35359085 - 35358947
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggt-----ttggat 227  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||||||| |||| |||| || ||| |||||||||||     ||||||    
T  35359085 agttggcaatattagagttaatgtaatacttt--tttatctcgcgataaaccgcatcaaccgaactaatccaagccgtattggtttggtttggtttggat 35358988  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgct 268  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  35358987 gactttttaaatatcaaccgaaccaaaccaaaccgcatgct 35358947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 333
Target Start/End: Original strand, 36103627 - 36103749
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat-gcttttttctctcgcggtttggatgattattatgcttgaaaccga 310  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||   |||||| |||| |  ||||||||  | |||||||  |||||||    
T  36103627 ttggtttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcatattttttttatctcacactttggatgtattttatgctcaaaaccga 36103726  T
Q  311 accaaatcgcaccgcgaacaccc 333  Q
    |||||| ||||||||||||||||    
T  36103727 accaaaccgcaccgcgaacaccc 36103749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 10174170 - 10174096
Alignment:
Q  194 gaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgct 268  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||    
T  10174170 gaaccaatccaaaccgcattggtttggtttggataactttttaaaaatcaaccaaacgaaaccaaaccgcatgct 10174096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 35359437 - 35359344
Alignment:
Q  40 aatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaattgcttggtacta 133  Q
    ||||||||||| |||| |||||||||||||||||||||| | ||||||||||||||||||||       ||||| |||||||||||||||||||    
T  35359437 aatgttattttggatagataacttttattggtattgtaacgttattttggaacttcaagttctttttttgaatatttaaaattgcttggtacta 35359344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 23780839 - 23780770
Alignment:
Q  264 atgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccc 333  Q
    |||||||||| ||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||    
T  23780839 atgcttttttatctcgcggtttggatgacttttatgcttaaaaccgaaccaaaccgcaccgcgaacaccc 23780770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 23867792 - 23867723
Alignment:
Q  264 atgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccc 333  Q
    |||||||||| ||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||    
T  23867792 atgcttttttatctcgcggtttggatgacttttatgcttaaaaccgaaccaaaccgcaccgcgaacaccc 23867723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 32521154 - 32521280
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattg-----gtttggtttggat 227  Q
    ||||||||||||||||||||||||||        |||||||| |||| |||||||  ||| ||||||||| |||| ||||||     |||||||||||||    
T  32521154 agttggcaatattagagttaatgtaatatttttttttatctcacgataaaccgcacaaaccgaaccaatccaaactgcattgatttggtttggtttggat 32521253  T
Q  228 gactttttaaaaatcaaccgaaccaaa 254  Q
    || ||||||||||||||||||||||||    
T  32521254 gaatttttaaaaatcaaccgaaccaaa 32521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 27572081 - 27572185
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    ||||||||  ||||||||||||||||||||||||||||||||  || |||||| |||||| | |||  ||  ||||||||||||| |||||||| |||||    
T  27572081 ttttaaaagacaaccgaaccaaaccaaaccgcatgcttttttaccttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcaaacac 27572180  T
Q  332 cccta 336  Q
    |||||    
T  27572181 cccta 27572185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 9988790 - 9988995
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttg-------- 224  Q
    ||||||||||||||||||||||||||        ||||||||||||| ||||||| || | |||||||||||| |||||||||||| |||||            
T  9988790 agttggcaatattagagttaatgtaatatttt--tttatctcgcgataaaccgcaccacc-gaaccaatctaagccgcattggttttgtttggtttgatt 9988886  T
Q  225 --gatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
      ||||||||||||||||||||||||| |||||||     |||| |||||| ||||| ||||||||||| | ||||| |  |||||||| || | |||||    
T  9988887 tggatgactttttaaaaatcaaccgaatcaaacca-----catgtttttttatctcgtggtttggatgacttttatgttcaaaaccgaatcataccgcac 9988981  T
Q  323 cgcgaacaccccta 336  Q
     | |||||||||||    
T  9988982 tgtgaacaccccta 9988995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 25495131 - 25495024
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    ||||||||||||||||||  ||||||||| |||| ||| ||| | | ||||||| ||||| | |||  ||  ||||||||||||| ||||  ||||||||    
T  25495131 ttttaaaaatcaaccgaaaaaaaccaaactgcatacttatttatgttgcggtttagatgacttttagcctcaaaaccgaaccaaaccgcatagcgaacac 25495032  T
Q  332 ccctaatt 339  Q
    ||||||||    
T  25495031 ccctaatt 25495024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 36567803 - 36567735
Alignment:
Q  197 ccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcat 265  Q
    |||||| ||||||||||||||||||||| ||    |||||||| |||||| |||| |||||||||||||    
T  36567803 ccaatccaaaccgcattggtttggtttgaattttattttaaaagtcaaccaaaccgaaccaaaccgcat 36567735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 40692541 - 40692501
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  40692541 ttttaaaagtcaaccgaaccaaaccaaatcgcatgcttttt 40692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 34881360 - 34881419
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatga 291  Q
    |||||||| ||||| |||| |||||||||||  ||||||||| ||||| |||||||||||    
T  34881360 ttttaaaagtcaactgaactaaaccaaaccgtttgcttttttatctcgtggtttggatga 34881419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 2589021 - 2588980
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| |||||| ||||||||||||||||||| ||||||    
T  2589021 ttttaaaagtcaaccaaaccaaaccaaaccgcatgttttttt 2588980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 2422888 - 2422824
Alignment:
Q  197 ccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 261  Q
    ||||||||||| |||||||||||||   ||| |  |||||||| |||||| ||||||||||||||    
T  2422888 ccaatctaaactgcattggtttggtccagattatattttaaaagtcaaccaaaccaaaccaaacc 2422824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 17132126 - 17132166
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  17132126 ttttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 17132166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 32244412 - 32244452
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  32244412 ttttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 32244452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 41454971 - 41454927
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg 225  Q
    ||||||| |||| || |||||| ||||||||||||||||||||||    
T  41454971 aaccgcaccaacagatccaatccaaaccgcattggtttggtttgg 41454927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 51149485 - 51149797
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||    
T  51149485 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttgga-cttcaagttctttttttgaataattaaaatt 51149583  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51149584 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 51149683  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51149684 tggatcactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcac 51149783  T
Q  323 cgcgaacaccccta 336  Q
    ||||||||||||||    
T  51149784 cgcgaacaccccta 51149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 34794849 - 34794537
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  34794849 tattattttggtattgtaatgttattttagataaataactgttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 34794750  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34794749 gcttggtactagttggcaatattagagttaatgtaatttttt-atttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 34794651  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34794650 tggatgactttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaaccgcac 34794551  T
Q  323 cgcgaacaccccta 336  Q
    ||||||||||||||    
T  34794550 cgcgaacaccccta 34794537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 23 - 337
Target Start/End: Original strand, 35402027 - 35402346
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  35402027 tattactttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 35402126  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattgg-----tt 217  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||     ||    
T  35402127 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 35402226  T
Q  218 tggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||     
T  35402227 tggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcgatttggatgattattatgcttgaaaccgaaccaaac 35402326  T
Q  318 cgcaccgcgaacacccctaa 337  Q
    ||||||||||||||||||||    
T  35402327 cgcaccgcgaacacccctaa 35402346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 10369477 - 10369154
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||    
T  10369477 tattattttggtactgtaatgttattttagataaataacttttattggtattttaatgctattttggaacttcaagttctttttttgaataattaaaatt 10369378  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||| ||||||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  10369377 gcttggtactaattggcaatattagtgttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 10369278  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  10369277 tggtttggtttggatgactttttaaaaatcaaacgaaccgaaccaaaccgcatgtttttttctctcgcagtttggatgattattatgcttgaaaccgaac 10369178  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  10369177 caaaccgcaccgcgaacaccccta 10369154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 109 - 336
Target Start/End: Original strand, 4669550 - 4669787
Alignment:
Q  109 gaataattaaaattgcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaacc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||    
T  4669550 gaataattaaaattgcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaacc 4669649  T
Q  209 gcattgg----------tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattat 298  Q
    |||||||          ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4669650 gcattggtttggtttggtttggttcggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattat 4669749  T
Q  299 gcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||||||||||| |||||||| ||||| ||||    
T  4669750 gcttgaaaccgaaccaaaccgcaccgcaaacactccta 4669787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 23 - 264
Target Start/End: Complemental strand, 33361219 - 33360968
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||||||||||||    
T  33361219 tattattttggtactgtagtgttattttagataaataacttttattggtattgtaatactattttggaacttcaagttcttttttttaataattaaaatt 33361120  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggt- 221  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  33361119 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 33361020  T
Q  222 ---------ttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 264  Q
             |||||||||||||||||||||||||||||||||||||||||||    
T  33361019 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 33360968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 6004327 - 6004527
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||| ||||| |||||||||||||||||||||||||||||    
T  6004327 agttggcaatattagagttaatgtaatattt---tttatctcgcgataaaccgcacaaaccgaatcaatccaaaccgcattggtttggtttggatgactt 6004423  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||  ||||||||||||| |||| ||| ||||||    
T  6004424 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctgaaaaccgaaccaaaccgcatcgcaaacacc 6004523  T
Q  333 ccta 336  Q
    ||||    
T  6004524 ccta 6004527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 9827719 - 9827918
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    |||| |||||||||||||||||||||        ||||||||||||| ||||||| |||||||||||||| || ||| ||||||||||||||||||||||    
T  9827719 agttcgcaatattagagttaatgtaatttt----tttatctcgcgataaaccgcaccaactgaaccaatccaagccgtattggtttggtttggatgactt 9827814  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||| ||||||| |||  |||||||||  || ||||| ||||||||||| | |||||||| ||||||||||||  |||||||||||||||    
T  9827815 tttaaaaatcaacctaaccaaatcaagtcgcatgcttaattatctcgtggtttggatgacttttatgcttaaaaccgaaccaagccgcaccgcgaacacc 9827914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 133 - 337
Target Start/End: Complemental strand, 32880445 - 32880242
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||| ||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||  |||||| |||||||||||||| |||||||    
T  32880445 agttgacaatattagagttaatgtaatattttt-tttatctcgcgataaaccgcacaaaccgaaccaattcaaaccgtattggtttggtttgtatgactt 32880347  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| || | |||||||  || |||||||||| |||||||| |||||     
T  32880346 tttaaaaatcaaccgaaccaaatcaaaccacatgcttttttatctcgcggtttggaggacttttatgctcaaagccgaaccaaaccgcaccgcaaacact 32880247  T
Q  333 cctaa 337  Q
    |||||    
T  32880246 cctaa 32880242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 50562509 - 50562710
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| || ||| ||||||||| || |||||| ||    
T  50562509 agttggcaatattagagttaatgtaatatttt--tttatctcgcgataaaccgcacaaaccgaaccaatccaagccgaattggtttgattgggatgaatt 50562606  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||  |||| ||||| | |||||||| ||| ||||||||| |||||||||| ||||    
T  50562607 tttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatctcgtagtttagatgacttttatgcttaaaatcgaaccaaaccgcaccgcgatcacc 50562706  T
Q  333 ccta 336  Q
    ||||    
T  50562707 ccta 50562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 167 - 334
Target Start/End: Original strand, 21586814 - 21586981
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    ||||||||||||| ||| |||  ||| ||||||||| || | ||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||    
T  21586814 tttatctcgcgataaactgcacaaaccgaaccaatccaagctgcattggtttggtttggatgactttttaaaaatcaactgaatcaaaccaaactgcatg 21586913  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccc 334  Q
    ||||||| ||||||||||||||||| | ||| |||  |||||||||||||  |||||| |||||||||    
T  21586914 cttttttatctcgcggtttggatgacttttaagctcaaaaccgaaccaaactgcaccgtgaacacccc 21586981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 4669416 - 4669493
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  4669416 tattattttggtactgtaatgttattttagataaataactttcattggtattgtaatgctatttttgaacttcaagtt 4669493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 48032843 - 48032931
Alignment:
Q  190 aactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcg 279  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  48032843 aactgaaccaatccaaaccgcattggtttggtttggatgaatttttaaaaatcaaccgaacc-aaccaaaccgcatgcttttttatctcg 48032931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 337
Target Start/End: Complemental strand, 43030483 - 43030358
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| ||| || | |||| | |||||||  ||||  ||    
T  43030483 ttggtttagtttggatgactttttaaaaatcaaccgaaccaaaccaaactgcatacttttttatcttgcgattcgcatgacttttatgctcaaaactaaa 43030384  T
Q  312 ccaaatcgcaccgcgaacacccctaa 337  Q
     |||| ||||||||||||||||||||    
T  43030383 tcaaaccgcaccgcgaacacccctaa 43030358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 26291992 - 26292097
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    ||||||||||||||||||||||| |||||||||   |||||| ||| ||||||||||||||| |||   || ||| ||||||||| ||||||||||||||    
T  26291992 ttttaaaaatcaaccgaaccaaagcaaaccgcacaattttttatcttgcggtttggatgatttttaattttaaaatcgaaccaaaccgcaccgcgaacac 26292091  T
Q  332 ccctaa 337  Q
    ||||||    
T  26292092 ccctaa 26292097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 55467622 - 55467782
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttct 275  Q
    ||||||| ||||||| |||||| |||||||||||||||| ||||| |  || |||   |||||| ||||||||||||||||||||||||| ||| ||| |    
T  55467622 aaccgcaccaactgatccaatccaaaccgcattggtttgatttggttcggattttattttaaaagtcaaccgaaccaaaccaaaccgcatacttatttat 55467721  T
Q  276 ctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    || || ||| |||||| | |||  ||  ||||||||||||| |||||||| ||||| ||||    
T  55467722 cttgcagttcggatgacttttagcctcaaaaccgaaccaaaccgcaccgcaaacacaccta 55467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 38651974 - 38652131
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    |||||||||||| || |||| | |||||||||| |||||||||||||    |||| ||| |||||||||||||||||||||||||  |||||| ||| ||    
T  38651974 aaccgcatcaaccgatccaacccaaaccgcattagtttggtttggatattatttttaaagtcaaccgaaccaaaccaaaccgcat-attttttatcttgc 38652072  T
Q  281 ggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaatt 339  Q
    | || |||||| | |||   |  ||||| ||||||| ||||||||||| ||||||||||    
T  38652073 gattcggatgacttttaccttcaaaaccaaaccaaaccgcaccgcgaatacccctaatt 38652131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 39098010 - 39097891
Alignment:
Q  217 ttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt-tctctc--gcggtttggatgattattatgcttgaaaccgaacc 313  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||| |||| |  || |||||||||| | |||||||  ||| ||||||    
T  39098010 ttggtttggacgactttttaaaaatcaactgaaccaaatcaaaccgcatgttttttatctcgcatgcagtttggatgacttttatgctcaaaatcgaacc 39097911  T
Q  314 aaatcgcaccgcgaacaccc 333  Q
    ||| |  |||||||||||||    
T  39097910 aaaccaaaccgcgaacaccc 39097891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 26758270 - 26758163
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||||||||||||||||| || ||| ||| ||| |||||| |||||| | |||  ||| |||||||||||||||  |||| ||||||    
T  26758270 ttttaaaagtcaaccgaaccaaaccaaaccgtatacttatttatcttgcggttcggatgacttttaaccttaaaaccgaaccaaatcataccgtgaacac 26758171  T
Q  332 ccctaatt 339  Q
     |||||||    
T  26758170 gcctaatt 26758163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 9817756 - 9817810
Alignment:
Q  43 gttattttagataaataacttttattggtattgtaatgctattttggaacttcaa 97  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  9817756 gttattttggataaataacttttattggtattgtaattttattttggaacttcaa 9817810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 17144766 - 17144865
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||||||||||||| |||||| | ||||| ||| ||||||||||||| | |||  ||  ||||||||||||| ||||| ||||||||    
T  17144766 ttttaaaagtcaaccgaaccaaaccaatccgcatac-tttttatcttgcggtttggatgacttttagcctcaaaaccgaaccaaaccgcactgcgaacac 17144864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 20846518 - 20846418
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatg--cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaac 329  Q
    |||||||| ||||||||||||||||||| ||||||   |||||| ||| |||||| |||||| | |||  || ||||||||||||||  |||||||||||    
T  20846518 ttttaaaagtcaaccgaaccaaaccaaagcgcatgtatttttttatcttgcggttcggatgacttttactctcgaaaccgaaccaaactgcaccgcgaac 20846419  T
Q  330 a 330  Q
    |    
T  20846418 a 20846418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 2832446 - 2832541
Alignment:
Q  243 aaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaat 338  Q
    |||| |||||||||||||||||||||||||| ||| | |||| |||||| | |||  ||  ||||| ||||||| | ||||||||||| |||||||    
T  2832446 aaccaaaccaaaccaaaccgcatgcttttttatcttgtggttcggatgacttttagcctcaaaaccaaaccaaaccacaccgcgaacaaccctaat 2832541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 35532193 - 35532256
Alignment:
Q  253 aaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaa 316  Q
    ||||||||||||||||||||| ||||||  ||||||||| | |||||||  |||||||||||||    
T  35532193 aaccaaaccgcatgcttttttatctcgcaatttggatgacttttatgctcaaaaccgaaccaaa 35532256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 40483969 - 40483862
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| ||||| ||||||||||||||||||||| ||||| ||| | |||| | |||||| |||   || ||| |||| |||| |||||  |||||||    
T  40483969 ttttaaaagtcaactgaaccaaaccaaaccgcatgcatttttatcttgtggttcgaatgatttttaactttaaaatcgaatcaaaccgcacaacgaacac 40483870  T
Q  332 ccctaatt 339  Q
    ||||||||    
T  40483869 ccctaatt 40483862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 54122067 - 54122008
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatga 291  Q
    |||||||| ||||||||||||||||||||||||| ||||||| |||  ||||| ||||||    
T  54122067 ttttaaaagtcaaccgaaccaaaccaaaccgcatacttttttatcttacggttcggatga 54122008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 45915189 - 45915298
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    ||||||| |||| || |||||  ||||||||||||| |||||||| |    |||||||| ||||||||||||||||||||||||| ||| ||  ||| ||    
T  45915189 aaccgcaccaaccgatccaattcaaaccgcattggtctggtttgg-tttggttttaaaagtcaaccgaaccaaaccaaaccgcatacttattcatcttgc 45915287  T
Q  281 ggtttggatga 291  Q
    |||||| ||||    
T  45915288 ggtttgaatga 45915298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 42363261 - 42363362
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||| ||| |||||||||||||||||||||||||| |||||| ||| ||||||   || | | |||  ||  ||||||||||||| ||||| ||||||||    
T  42363261 tttttaaagtcaaccgaaccaaaccaaaccgcatgattttttatcttgcggttcaaattacttttaccctcaaaaccgaaccaaaccgcactgcgaacac 42363360  T
Q  332 cc 333  Q
    ||    
T  42363361 cc 42363362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 20038487 - 20038443
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg 225  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||    
T  20038487 aaccgcaacaattgaaccaatccaaaccgcattggtttggtttgg 20038443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 51191807 - 51191699
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcat-----tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttct 275  Q
    ||||||| |||| ||||||||| |||||||||     |||||||||| || |  | ||||||||  ||||||||||||||||||||||||  |||||| |    
T  51191807 aaccgcaacaaccgaaccaatccaaaccgcatcggtttggtttggttcggttttcattttaaaatccaaccgaaccaaaccaaaccgcatatttttttat 51191708  T
Q  276 ctcgcggtt 284  Q
    || ||||||    
T  51191707 cttgcggtt 51191699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 21238139 - 21238030
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    ||||||| |||  |||||| |||||||||||||| |||| ||||| |  | |||||||| ||||   ||||||||||||||| ||  |||||| ||| ||    
T  21238139 aaccgcaacaatcgaaccactctaaaccgcattgatttgatttggttttcattttaaaagtcaaataaaccaaaccaaaccg-atttttttttatcttgc 21238041  T
Q  281 ggtttggatga 291  Q
    |||||||||||    
T  21238040 ggtttggatga 21238030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 23 - 338
Target Start/End: Original strand, 5710 - 6025
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||||||||||||||    
T  5710 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgttattttggaacttcaagttctttttttgaataattaaaatt 5809  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    | |||||||||||| |||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5810 gattggtactagttcgcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 5909  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  5910 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaatcgaaccaaaccgcac 6009  T
Q  323 cgcgaacacccctaat 338  Q
    ||||||||||||||||    
T  6010 cgcgaacacccctaat 6025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 36077828 - 36077515
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||    
T  36077828 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgcttttttggaacttcaagttctttttttgaataattaaaatt 36077729  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtt 222  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  36077728 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgtattggtttggtt 36077629  T
Q  223 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  36077628 tggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatacttttttctctcgcggtttgaatgattattatgcttgaaaccgaaccaaaccgcac 36077529  T
Q  323 cgcgaacaccccta 336  Q
    ||||||||||||||    
T  36077528 cgcgaacaccccta 36077515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 50570775 - 50571098
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  50570775 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 50570874  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  50570875 gtttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 50570974  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50570975 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 50571074  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  50571075 caaaccgcaccgcgaacaccccta 50571098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 29637039 - 29636716
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  29637039 tattattttggtactggaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 29636940  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  29636939 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 29636840  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29636839 tggtttggtttggatggctttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 29636740  T
Q  313 caaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||||    
T  29636739 caaaccgcaccgcgaacaccccta 29636716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 23 - 338
Target Start/End: Complemental strand, 42557989 - 42557665
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||       ||||||||||||||    
T  42557989 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgttattttgg-acttcaagttctttttttgaataattaaaatt 42557891  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattgg------- 215  Q
    | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||           
T  42557890 gtttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 42557791  T
Q  216 ---tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42557790 tgatttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttgaatgattattatgcttgaaaccgaac 42557691  T
Q  313 caaatcgcaccgcgaacacccctaat 338  Q
    |||| |||||||||||||||||||||    
T  42557690 caaaccgcaccgcgaacacccctaat 42557665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 110 - 338
Target Start/End: Original strand, 29644029 - 29644267
Alignment:
Q  110 aataattaaaattgcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccg 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||| ||||||    
T  29644029 aataattaaaattgcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaattgaaccaatccaaaccg 29644128  T
Q  210 cattgg----------tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatg 299  Q
    ||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29644129 cattggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatg 29644228  T
Q  300 cttgaaaccgaaccaaatcgcaccgcgaacacccctaat 338  Q
     |||||||||||||||| |||||||||||||||||||||    
T  29644229 tttgaaaccgaaccaaaccgcaccgcgaacacccctaat 29644267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 133 - 338
Target Start/End: Original strand, 30193914 - 30194118
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  30193914 agttggcaatattagagttaatgtaatatttt--tttatctcgcgataaaccgcataaaccgaaccaatccaaaccgcattggtttggtttggatgactt 30194011  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgc-ttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| |||| | || | ||| || ||||| |||| ||||||||||||||    
T  30194012 tttaaaaatcaaccgaaccaaaccaaaccgcatgctttttttatctcacggtttgaatgacttttttacttaaacccgaatcaaaccgcaccgcgaacac 30194111  T
Q  332 ccctaat 338  Q
    |||||||    
T  30194112 ccctaat 30194118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 40900018 - 40900223
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattgg-----tttggtttggat 227  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  |||  |||||||| ||||||||||||     ||||||||||||    
T  40900018 agttggcaatattagagttaatgtaatattt---tttatctcgcgataaaccgcacaaaccaaaccaatccaaaccgcattggtttggtttggtttggat 40900114  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| | |||||||  ||||||||||||| ||||||||||    
T  40900115 gactttttaaaaatcaactgaaccaaaccaaaccgcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcga 40900214  T
Q  328 acaccccta 336  Q
    |||||||||    
T  40900215 acaccccta 40900223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 133 - 339
Target Start/End: Original strand, 5261904 - 5262107
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        || |||||||||| |||||||||||| ||||||||| || |   ||||||||||||||||||||||    
T  5261904 agttggcaatattagagttaatgtaatattt---ttaatctcgcgataaaccgcatcaaccgaaccaatccaagctaaattggtttggtttggatgactt 5262000  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||| | |||||||  |||||||| |||| |||| ||||||||||    
T  5262001 tttaaaaatcaactgaactaaaccaaaccgcatgcttttttatcttgcggtttggatgacttttatgctcaaaaccgaatcaaaccgcatcgcgaacacc 5262100  T
Q  333 cctaatt 339  Q
    | |||||    
T  5262101 cgtaatt 5262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 48996228 - 48996027
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||| ||||||||||||||||||||        ||||||| ||||| |||||||  ||  ||||||||| || ||||||||||||||||||||| ||||    
T  48996228 agttgacaatattagagttaatgtaatatttt--tttatcttgcgataaaccgcacaaatcgaaccaatccaagccgcattggtttggtttggataactt 48996131  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||| || ||| ||||||||| | ||| |||||||||    
T  48996130 tttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatttcgcggtttggatgatttttatgattaaaatcgaaccaaaccacactgcgaacacc 48996031  T
Q  333 ccta 336  Q
    ||||    
T  48996030 ccta 48996027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 40806751 - 40806958
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattgg-----tttggtttggat 227  Q
    ||||| ||||||||||||||||||||        ||||||||| ||| |||||||  ||| ||||||||| |||| |||||||     ||||||||||||    
T  40806751 agttgacaatattagagttaatgtaatattttt-tttatctcgtgataaaccgcacaaaccgaaccaatccaaactgcattggtttggtttggtttggat 40806849  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
    || ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||  ||||||||||||| | |||||| |    
T  40806850 gattttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccacaccgcaa 40806949  T
Q  328 acaccccta 336  Q
    |||||||||    
T  40806950 acaccccta 40806958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 167 - 338
Target Start/End: Complemental strand, 43630689 - 43630518
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    |||||||| |||| ||| |||  ||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||     
T  43630689 tttatctcacgataaactgcacaaaccgaaccaatccaagccgcattggtttgatttggatgactttttaaaaatcaaccaaaccaaaccaaaccgcata 43630590  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaat 338  Q
     |||||| |||| |||||||||||| | |||| ||  ||| ||||||||| |||||||||||||| ||||||    
T  43630589 tttttttatctcacggtttggatgacttttatactcaaaatcgaaccaaaccgcaccgcgaacactcctaat 43630518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 32136841 - 32136635
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg-----at 227  Q
    ||||| ||||||||||||||||||||        |||||||| |||| |||||||  ||| ||||||||| ||||||||||||||||||||||     ||    
T  32136841 agttgacaatattagagttaatgtaatatttt--tttatctcacgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggat 32136744  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
    || |||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||| ||| | ||||| |  ||||||||||||| ||||| || |    
T  32136743 gaatttttaaaaatcaatcgaaccaaaccaaatcgcatgcttttttatctcgaggtttgggtgacttttatgttcaaaaccgaaccaaaccgcactgcaa 32136644  T
Q  328 acaccccta 336  Q
    |||||||||    
T  32136643 acaccccta 32136635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 6333465 - 6333259
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg------- 225  Q
    |||||| |||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| ||||||||||||||||||||||           
T  6333465 agttggtaatattagagttaatgtaatttttt--tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttgatt 6333368  T
Q  226 ---atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
       |||||||||||||||||||||     |||||||||||||||||||||| ||||||||||||||||| | || ||||  ||| ||||||||| |||||    
T  6333367 tggatgactttttaaaaatcaacc-----aaaccaaaccgcatgcttttttatctcgcggtttggatgacttttttgctcaaaatcgaaccaaaccgcac 6333273  T
Q  323 cgcgaacaccccta 336  Q
    ||||||||||||||    
T  6333272 cgcgaacaccccta 6333259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 133 - 334
Target Start/End: Complemental strand, 51394862 - 51394663
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatg---- 228  Q
    |||||||||||||||| |||||||||        ||||||||||||| |||||||||||||||||||||| ||  | |||||||||||||||| ||        
T  51394862 agttggcaatattagaattaatgtaatatttt--tttatctcgcgataaaccgcatcaactgaaccaatcaaagtcacattggtttggtttggttggaaa 51394765  T
Q  229 -actttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcga 327  Q
     ||||||||||||||||||||| ||||||     |||||||||||| ||||||||||||||||| | |||||||  |||| ||||||||  |||||||||    
T  51394764 gactttttaaaaatcaaccgaatcaaacc-----gcatgcttttttatctcgcggtttggatgacttttatgctcaaaactgaaccaaactgcaccgcga 51394670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 337
Target Start/End: Original strand, 23937492 - 23937659
Alignment:
Q  170 atctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctt 269  Q
    ||||||| || |||||||  ||| ||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  23937492 atctcgcaataaaccgcacaaaccgaaccaatccaagctgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatattt 23937591  T
Q  270 ttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaa 337  Q
    |||| |||||  |||| ||||| | |||||||  ||||  || |||| |||||| |||||| ||||||    
T  23937592 ttttatctcgtagtttagatgacttttatgctcaaaactaaatcaaaccgcaccacgaacatccctaa 23937659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 133 - 338
Target Start/End: Complemental strand, 52344876 - 52344678
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||| ||        ||||||| | ||| |||||||  ||| ||||||||| || ||||||||||||||||||||||||||    
T  52344876 agttggcaatattagagttaatggaatatttt--tttatcttgtgataaaccgcacaaaccgaaccaatccaatccgcattggtttggtttggatgactt 52344779  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||| || |||||||     |||||||||||||||| |||| |||||||||||| | |||||||  ||| | | ||||| |||||||||||||||    
T  52344778 tttaaaaattaatcgaacca-----aaccgcatgcttttttatctcacggtttggatgacttttatgctcaaaatcaacccaaaccgcaccgcgaacacc 52344684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 133 - 338
Target Start/End: Complemental strand, 10218832 - 10218619
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg------- 225  Q
    ||||||||||||||||||||||||||        || |||||||||| ||||| |  ||| ||||||||| ||||||||||||||||||||||           
T  10218832 agttggcaatattagagttaatgtaatatttt--ttcatctcgcgataaaccgtacaaaccgaaccaatccaaaccgcattggtttggtttggttttgtt 10218735  T
Q  226 ---atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
       |||||| | ||||||||||| ||| ||||||||||||||||||||||| ||| | ||||| ||||| | |||||||  ||||||||||||| |||||    
T  10218734 tggatgactatataaaaatcaactgaatcaaaccaaaccgcatgcttttttatcttgaggtttagatgacttttatgctcaaaaccgaaccaaaacgcac 10218635  T
Q  323 cgcgaacacccctaat 338  Q
    ||| ||||||||||||    
T  10218634 cgcaaacacccctaat 10218619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 220 - 338
Target Start/End: Original strand, 13690872 - 13690990
Alignment:
Q  220 gtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcg 319  Q
    |||||||||||||||||||||||||||||| |||| ||||| | ||| ||| || ||||||||||||||||| | |||||||| ||| ||||||||| ||    
T  13690872 gtttggatgactttttaaaaatcaaccgaatcaaatcaaactgtatgttttattatctcgcggtttggatgacttttatgcttaaaatcgaaccaaaccg 13690971  T
Q  320 caccgcgaacacccctaat 338  Q
    || | ||||||| ||||||    
T  13690972 catcacgaacacacctaat 13690990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 335
Target Start/End: Original strand, 48293413 - 48293544
Alignment:
Q  204 aaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttg 303  Q
    ||||||||||||||||||| ||||    ||||||||  ||||||||||||||||||||||||||||||||  || |||||| |||||| | |||  ||      
T  48293413 aaaccgcattggtttggttcggattttattttaaaagacaaccgaaccaaaccaaaccgcatgcttttttaccttgcggttcggatgacttttaacctca 48293512  T
Q  304 aaaccgaaccaaatcgcaccgcgaacacccct 335  Q
    |||||||||||||  |||||||||||||||||    
T  48293513 aaaccgaaccaaactgcaccgcgaacacccct 48293544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 23120273 - 23120397
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||||||||||||  ||||| ||| |||| |||||||||||||||||||||||||||| ||| |||||| |||||| | |||   |  ||| ||||    
T  23120273 ttggtttggtttggatgttttttttaaagtcaatcgaaccaaaccaaaccgcatgcttttttatcttgcggttcggatgacttttaccttcaaaatcgaa 23120372  T
Q  312 ccaaatcgcaccgcgaacaccccta 336  Q
     |||| |||||||||||||||||||    
T  23120373 tcaaaccgcaccgcgaacaccccta 23120397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 36106399 - 36106564
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaa-ccgcatgcttttttc 274  Q
    ||||||| ||||||| ||||   |||||||||||||||||||||| |  || |||   |||||| ||||||||||||||||||| ||||||| ||||||     
T  36106399 aaccgcaccaactgatccaactcaaaccgcattggtttggtttggttcggattttattttaaaagtcaaccgaaccaaaccaaaaccgcatgttttttta 36106498  T
Q  275 tctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaattt 340  Q
    ||| |||||| |||||| | |||  ||  ||||||||||||| ||||||||||||| |||||||||    
T  36106499 tcttgcggttcggatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacatccctaattt 36106564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 256
Target Start/End: Original strand, 8176540 - 8176657
Alignment:
Q  137 ggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgacttttta 236  Q
    ||||||||||||||||||||||        ||||| || |||| |||||||  ||| ||||||||| || ||||||||||||||||| ||||||||||||    
T  8176540 ggcaatattagagttaatgtaatatttt--tttatttcacgataaaccgcacaaaccgaaccaatccaagccgcattggtttggtttagatgacttttta 8176637  T
Q  237 aaaatcaaccgaaccaaacc 256  Q
    |||||||||| |||||||||    
T  8176638 aaaatcaaccaaaccaaacc 8176657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 5261537 - 5261611
Alignment:
Q  25 ttattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttc 101  Q
    |||||||||| |||  |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5261537 ttattttggttctg--atgttattttggatagataacttttattggtattgtaatgttattttggaacttcaagttc 5261611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 31301328 - 31301236
Alignment:
Q  246 cgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaat 338  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||  ||||  |||||||  ||||||| ||||||||||||    
T  31301328 cgaaccaaaccaaaccgcatgtttttttatctcgcggtttggatgacttttatgctcaaaactaaaccaaactgcaccgcaaacacccctaat 31301236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 45983479 - 45983378
Alignment:
Q  183 ccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcgg 282  Q
    |||||||||| || |||| | |||||||||| ||||||||||||||   |||| ||| ||||||||| |||||||||||||||| |||||| ||| ||||    
T  45983479 ccgcatcaaccgatccaacccaaaccgcattagtttggtttggatgttatttttaaagtcaaccgaatcaaaccaaaccgcatgattttttatcttgcgg 45983380  T
Q  283 tt 284  Q
    ||    
T  45983379 tt 45983378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 338
Target Start/End: Original strand, 5122420 - 5122526
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||| ||| |||||||||||||| |||||||||||||||||| ||| | |||||  |||| | |||  ||  ||||||||||||| |||||||| |||||    
T  5122420 tttttaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgtggtttatatgacttttaccctcaaaaccgaaccaaaccgcaccgcaaacac 5122519  T
Q  332 ccctaat 338  Q
    |||||||    
T  5122520 ccctaat 5122526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 23449985 - 23450079
Alignment:
Q  197 ccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatga 291  Q
    |||||| |||||||||||||||||| ||||| |  |||||||| | ||||||||||||||||||||||| ||| ||| ||| || ||| ||||||    
T  23449985 ccaatccaaaccgcattggtttggtgtggattatattttaaaagttaaccgaaccaaaccaaaccgcatacttatttatcttgcagttcggatga 23450079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 51395231 - 51395162
Alignment:
Q  25 ttattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttca 96  Q
    |||||||||| |||  |||||||||| || | |||||||||||||||||||||||| |||||||||||||||    
T  51395231 ttattttggttctg--atgttattttggaaagataacttttattggtattgtaatgttattttggaacttca 51395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 335
Target Start/End: Complemental strand, 48338407 - 48338285
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||||||||||||    |||||||| |||||||||||||||||||| ||||| |||||| |||  ||||| |||||| | |||  ||| ||||||||    
T  48338407 ttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatg-ttttttatcttacggttcggatgacttttaaccttaaaaccgaa 48338309  T
Q  312 ccaaatcgcaccgcgaacacccct 335  Q
    |||||  ||||||| || ||||||    
T  48338308 ccaaactgcaccgcaaatacccct 48338285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 20986468 - 20986364
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgctt-gaaaccgaaccaaatcgcaccgcgaaca 330  Q
    ||||| || ||||||||||||||||||||||||| ||| ||| ||| ||||||||||||| | ||| ||||  |||||||| |||| |||| ||| ||||    
T  20986468 ttttataagtcaaccgaaccaaaccaaaccgcatacttgtttatcttgcggtttggatgactttta-gcttcaaaaccgaaacaaaccgcatcgcaaaca 20986370  T
Q  331 ccccta 336  Q
    ||||||    
T  20986369 ccccta 20986364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 32223355 - 32223459
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| | ||| |||| || ||||||||||||||||||| |||  || ||||||||| | |||  ||  |||||||| |||| ||||||||||||||    
T  32223355 ttttaaaagtaaacggaacaaatccaaaccgcatgcttttttatctttcgatttggatgacttttaacctcaaaaccgaatcaaaccgcaccgcgaacac 32223454  T
Q  332 cccta 336  Q
    |||||    
T  32223455 cccta 32223459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 264
Target Start/End: Original strand, 48602504 - 48602587
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 264  Q
    ||||||| |||| || |||| | ||||||||||||||||||| ||||    |||| ||| ||||||||||||||||||||||||    
T  48602504 aaccgcaccaaccgatccaacccaaaccgcattggtttggttaggattgtattttcaaagtcaaccgaaccaaaccaaaccgca 48602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 41260276 - 41260211
Alignment:
Q  275 tctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaattt 340  Q
    |||||||||| |||||||| |||||||  ||||||||||||| |||||| | |||||| |||||||    
T  41260276 tctcgcggttaggatgatttttatgctcaaaaccgaaccaaaccgcaccacaaacacctctaattt 41260211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 41325172 - 41325090
Alignment:
Q  197 ccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtt 284  Q
    |||||| ||||||||||||||||||| |||     |||||||| |||||||||  ||| |||||||||| ||| ||| ||||||||||    
T  41325172 ccaatccaaaccgcattggtttggttcgga-----ttttaaaagtcaaccgaattaaatcaaaccgcatacttatttatctcgcggtt 41325090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 35233314 - 35233356
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaa 254  Q
    ||||||||||||||| ||||||||||||  |||||||||||||    
T  35233314 ttggtttggtttggacgactttttaaaagccaaccgaaccaaa 35233356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 14866823 - 14866782
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| ||||| |||||||||||||||||||| ||||||    
T  14866823 ttttaaaagtcaactgaaccaaaccaaaccgcatgttttttt 14866782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 15723948 - 15723887
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||||||||||||   |||| ||| ||||||||||||||| |||| |||| |||||||    
T  15723948 ttggtttggtttggatgttatttttaaagtcaaccgaaccaaactaaactgcatactttttt 15723887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 4688766 - 4688690
Alignment:
Q  194 gaaccaatctaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaaccaaaccaaaccgcat 265  Q
    ||||||||| ||||| ||||||||||||||||     || ||||||||||| ||||||||| | |||||||| ||||    
T  4688766 gaaccaatcaaaaccacattggtttggtttggttaagataactttttaaaagtcaaccgaatcgaaccaaactgcat 4688690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 19753557 - 19753597
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  19753557 ttttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 19753597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 19786249 - 19786209
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  19786249 ttttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 19786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 29232847 - 29232767
Alignment:
Q  184 cgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgca 264  Q
    |||| |||| || |||||| ||| ||||||||||| ||| ||||    |||||||| |||||||||| |||||||||||||    
T  29232847 cgcaccaaccgatccaatccaaatcgcattggtttagttcggattttattttaaaagtcaaccgaactaaaccaaaccgca 29232767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 51907129 - 51907085
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaacc 256  Q
    ||||||||||| |||||||||||||||| |||||| |||| ||||    
T  51907129 ttggtttggttcggatgactttttaaaagtcaaccaaaccgaacc 51907085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 23 - 338
Target Start/End: Original strand, 3006390 - 3006714
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| |||||    
T  3006390 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataatt-aaatt 3006488  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca----------t 212  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||          |    
T  3006489 gcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 3006588  T
Q  213 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3006589 tggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaac 3006688  T
Q  313 caaatcgcaccgcgaacacccctaat 338  Q
    |||| ||||||||||||||| |||||    
T  3006689 caaaccgcaccgcgaacacctctaat 3006714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 5803062 - 5803386
Alignment:
Q  23 tattattttggtactgtaatgtta-ttttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaat 121  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  5803062 tattattttggtactgtaatgttaattttagataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaat 5803161  T
Q  122 tgcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca---------- 211  Q
    ||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||              
T  5803162 tgcttggtactagttggcagtattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggt 5803261  T
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5803262 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaatcgaa 5803361  T
Q  312 ccaaatcgcaccgcgaacaccccta 336  Q
    ||||| ||||| |||||||||||||    
T  5803362 ccaaaccgcactgcgaacaccccta 5803386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 133 - 338
Target Start/End: Complemental strand, 10661297 - 10661094
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    |||||||||||||| |||||||||||        ||||||||||||| || ||||  ||| ||||||||  |||||||||||||||||||||||||||||    
T  10661297 agttggcaatattacagttaatgtaatatttt--tttatctcgcgataaatcgcacaaaccgaaccaatacaaaccgcattggtttggtttggatgactt 10661200  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||  ||||||||||||| |||||||||||||||    
T  10661199 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccaaaccgcaccgcgaacacc 10661100  T
Q  333 cctaat 338  Q
    ||||||    
T  10661099 cctaat 10661094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 133 - 333
Target Start/End: Complemental strand, 44672932 - 44672734
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        || |||||||||| |||| ||  ||  ||||||||| |||||||||||||||||||||||||||||    
T  44672932 agttggcaatattagagttaatgtaatatttt--ttcatctcgcgataaaccacacaaatcgaaccaatccaaaccgcattggtttggtttggatgactt 44672835  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||| | |||||||  |||||||||||||  ||||||| ||||||    
T  44672834 tttaaaaatcaatcgaaccaaaccaaaccgcatgtttttttatctcgcgatttggatgacttttatgctcaaaaccgaaccaaactgcaccgcaaacacc 44672735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 36910270 - 36910471
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        || |||||||||| ||| |||  ||| ||||||||| || |||| |||||||||||||||||||||    
T  36910270 agttggcaatattagagttaatgtaatattttt-ttaatctcgcgataaactgcacaaaccgaaccaatccaagccgc-ttggtttggtttggatgactt 36910367  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| | |||||||  ||| | ||||||| |||||||||||||||    
T  36910368 tttaaaaatcaaccgaaccaaactaaaccgcatgcttttttatctcgcggttttgatgacttttatgctcaaaatcaaaccaaaccgcaccgcgaacacc 36910467  T
Q  333 ccta 336  Q
    ||||    
T  36910468 ccta 36910471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 216 - 336
Target Start/End: Complemental strand, 33068328 - 33068208
Alignment:
Q  216 tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaa 315  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| | |||||||  ||||||||||||    
T  33068328 tttggtttggatgactttttaaaaatcaactgaaccaaaccaaaccgcatgcttttttatcttgcggtttggatgacttttatgctcaaaaccgaaccaa 33068229  T
Q  316 atcgcaccgcgaacaccccta 336  Q
    | |||||| ||||||||||||    
T  33068228 accgcaccacgaacaccccta 33068208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 333
Target Start/End: Complemental strand, 14549376 - 14549169
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg------- 225  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| ||||||||||||||||||||||           
T  14549376 agttggcaatattagagttaatgtaatattt---tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggtttggtt 14549280  T
Q  226 ---atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
       |||||||||||||||||||||||| |||||||||||||||  |||||| |||| |||||||||||| | |||||||  |||||||| |||| | |||    
T  14549279 tggatgactttttaaaaatcaaccgaatcaaaccaaaccgcatatttttttatctcacggtttggatgacttttatgctcaaaaccgaatcaaaccacac 14549180  T
Q  323 cgcgaacaccc 333  Q
    |||||||||||    
T  14549179 cgcgaacaccc 14549169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 137 - 337
Target Start/End: Original strand, 18169961 - 18170161
Alignment:
Q  137 ggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg-----atgact 231  Q
    ||||| ||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| ||||||||||||||||||||||     ||||||    
T  18169961 ggcaacattagagttaatgtaatttttttttttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggttttgatgact 18170060  T
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||||||     |||||||| |||||||| ||||||||||| ||||| | ||||| |  ||||||||||||| |||||| | |||||    
T  18170061 ttttaaaactcaaccgaacc-----aaaccgcacgcttttttatctcgcggtttagatgacttttatgttcaaaaccgaaccaaaccgcacctcaaacac 18170155  T
Q  332 ccctaa 337  Q
    ||||||    
T  18170156 ccctaa 18170161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 337
Target Start/End: Original strand, 18633558 - 18633729
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca------ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaac 260  Q
    ||||||||||||| |||||||  ||| ||||||||| ||||||||      |||||||||||| ||||||||||||||| |||||||     ||||||||    
T  18633558 tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggttttggtttggttttgatgactttttaaaactcaaccg-----aaccaaac 18633652  T
Q  261 cgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaa 337  Q
    |||| |||||||| ||||||||||| ||||| | ||||| |  ||||||||||||| |||||| | |||||||||||    
T  18633653 cgcacgcttttttatctcgcggtttagatgacttttatgttcaaaaccgaaccaaaccgcacctcaaacacccctaa 18633729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 6200878 - 6200989
Alignment:
Q  221 tttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgc 320  Q
    |||||||||||||||||||||||||  |||||||| |||||||||| |||||| |||||| |||||||| | | |||||||  ||||||||||||  ||     
T  6200878 tttggatgactttttaaaaatcaacttaaccaaactaaaccgcatgtttttttatctcgcagtttggattacttttatgctcaaaaccgaaccaagccgt 6200977  T
Q  321 accgcgaacacc 332  Q
    ||||||||||||    
T  6200978 accgcgaacacc 6200989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 171 - 336
Target Start/End: Complemental strand, 3682035 - 3681876
Alignment:
Q  171 tctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttt 270  Q
    ||||||||| |||||||  ||  ||||||||| || |||||||||||| |||||||||||||||||||| ||     ||||||||||||||||||| |||    
T  3682035 tctcgcgataaaccgcacaaatcgaaccaatccaagccgcattggtttagtttggatgactttttaaaagtc-----aaccaaaccaaaccgcatg-ttt 3681942  T
Q  271 tttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||| ||||||||||||||| | | ||||  |  ||||||||||||| ||||   ||||||||||||    
T  3681941 tttatctcgcggtttggataacttttatattcaaaaccgaaccaaaccgcaatacgaacaccccta 3681876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 30392169 - 30392083
Alignment:
Q  248 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccc 334  Q
    |||||||||||||||||||||||||| ||||||||||||||||| | |||||||  ||||||||||  | |||||||| ||||||||    
T  30392169 aaccaaaccaaaccgcatgcttttttatctcgcggtttggatgacttttatgctcaaaaccgaaccgcaccgcaccgcaaacacccc 30392083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 339
Target Start/End: Complemental strand, 44336819 - 44336711
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatg-cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaaca 330  Q
    |||||||| ||||||||||||||||||||||||||  |||||| ||| |||||| |||||| | |||  ||  ||||||||||||| |||||||||||||    
T  44336819 ttttaaaagtcaaccgaaccaaaccaaaccgcatgttttttttatcttgcggttcggatgacttttaaactcaaaaccgaaccaaaccgcaccgcgaaca 44336720  T
Q  331 cccctaatt 339  Q
    | |||||||    
T  44336719 ctcctaatt 44336711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 28073176 - 28073334
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    ||||||| ||| | ||| |||| ||||| ||||||||||||| || |  | |||||||| ||||| ||||||||| ||||| |||| |||||| | | ||    
T  28073176 aaccgcaacaattaaactaatccaaaccacattggtttggttcggttttcattttaaaagtcaactgaaccaaactaaaccacatgtttttttatattgc 28073275  T
Q  281 ggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacccctaatt 339  Q
    ||||  ||||| | |||  ||| || || | ||||| ||||||||||||||||||||||    
T  28073276 ggttcagatgacttttagccttaaacccaagccaaaccgcaccgcgaacacccctaatt 28073334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 4785282 - 4785178
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||||||||| |||||||||| ||||||| |   |||||| | |||| | |||  ||  |||||||||||||| | |||||||||||    
T  4785282 ttttaaaagtcaaccgaaccaaatcaaaccgcatacttttttattctgcggttcgtatgacttttaatctcaaaaccgaaccaaattgtaccgcgaacac 4785183  T
Q  332 cccta 336  Q
    |||||    
T  4785182 cccta 4785178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 273
Target Start/End: Original strand, 7428434 - 7428510
Alignment:
Q  197 ccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||| |||||||||| |||||||| | ||    |||||||| ||||||||||||||||||||||||||| |||||    
T  7428434 ccaatccaaaccgcattagtttggttcgaattttattttaaaagtcaaccgaaccaaaccaaaccgcatgcattttt 7428510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 38926419 - 38926481
Alignment:
Q  189 caactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaacc 251  Q
    |||| ||||||||| ||||| |||||||||||||   |||||||||||||| |||||||||||    
T  38926419 caaccgaaccaatccaaaccacattggtttggttcaaatgactttttaaaagtcaaccgaacc 38926481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 336
Target Start/End: Original strand, 12883777 - 12883870
Alignment:
Q  243 aaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||||||||||||||||||||||| ||| ||| | | | |||| | |||| | |||  ||  ||||||||||||| |||||||||||||||||||    
T  12883777 aaccgaaccaaaccaaaccgcatacttatttattttgtggttcgaatgacttttaacctcaaaaccgaaccaaaccgcaccgcgaacaccccta 12883870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 40436483 - 40436378
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttc-tctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaaca 330  Q
    |||| ||| |||||||||||||||||||| ||||| ||||||  ||| ||  ||||||| | | |||  ||  ||||||||||||| |||||||||||||    
T  40436483 tttttaaagtcaaccgaaccaaaccaaacggcatgttttttttatcttgcaatttggatcacttttaccctcaaaaccgaaccaaaccgcaccgcgaaca 40436384  T
Q  331 ccccta 336  Q
    ||||||    
T  40436383 ccccta 40436378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 336
Target Start/End: Complemental strand, 11218996 - 11218892
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||| |||||||||||| ||||| ||| ||| ||| ||| || |||||| | |||  ||  ||| ||||||||| |||||| |||||||    
T  11218996 ttttaaaagtcaaccaaaccaaaccaaatcgcatacttatttatcttgcgtttcggatgacttttagcctcaaaatcgaaccaaaccgcaccccgaacac 11218897  T
Q  332 cccta 336  Q
    |||||    
T  11218896 cccta 11218892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 8036079 - 8036037
Alignment:
Q  242 caaccgaaccaaaccaaaccgcatgcttttttctctcgcggtt 284  Q
    ||||||||||||||||||| |||||||||||| ||| ||||||    
T  8036079 caaccgaaccaaaccaaactgcatgcttttttatcttgcggtt 8036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 24682126 - 24682227
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||| |||| |||||||||| |||| ||| ||| ||| |||||| |||||| | |||  ||  ||||||||||||  |||||| |||||||    
T  24682126 ttttaaaagtcaatcgaatcaaaccaaactgcatacttatttatcttgcggttcggatgaattttagcctcaaaaccgaaccaagccgcaccacgaacac 24682225  T
Q  332 cc 333  Q
    ||    
T  24682226 cc 24682227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 31497615 - 31497664
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 261  Q
    |||||||||||||||||   |||| ||| |||||||||||||||||||||    
T  31497615 ttggtttggtttggatgttatttttaaagtcaaccgaaccaaaccaaacc 31497664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 336
Target Start/End: Original strand, 31497656 - 31497749
Alignment:
Q  243 aaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||| ||||||||| ||| |||||| |||||| | |||   |  ||||| ||||||| |||| || |||||||||||    
T  31497656 aaccaaaccaaaccaaaccgcgtgcttttttatcttgcggttcggatgacttttaccttcaaaaccaaaccaaagcgcatcgtgaacaccccta 31497749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 33566003 - 33565962
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    ||||| || ||||||||||||||||||||||||| |||||||    
T  33566003 ttttagaagtcaaccgaaccaaaccaaaccgcatactttttt 33565962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 12660257 - 12660321
Alignment:
Q  197 ccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 261  Q
    |||||| |||||||||| |||||||| ||||    |||| ||| |||||||||||||||||||||    
T  12660257 ccaatccaaaccgcatttgtttggttcggattttatttttaaactcaaccgaaccaaaccaaacc 12660321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 15272358 - 15272446
Alignment:
Q  248 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||||||||| ||||||||| ||  || ||| |||||| | |||  ||  |||||| |||||| ||||||||||| |||||||    
T  15272358 aaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaatctcaaaaccgtaccaaaccgcaccgcgaaaaccccta 15272446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 336
Target Start/End: Original strand, 15452727 - 15452815
Alignment:
Q  248 aaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||||||||| ||||||||| ||  || ||| |||||| | |||  ||  |||||| |||||| ||||||||||| |||||||    
T  15452727 aaccaaaccaaaccgcgtgcttttttatcctgccgttcggatgacttttaatctcaaaaccgtaccaaaccgcaccgcgaaaaccccta 15452815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 36340796 - 36340836
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttt 272  Q
    |||||||| |||||||||||||| |||||||||| ||||||    
T  36340796 ttttaaaagtcaaccgaaccaaatcaaaccgcatacttttt 36340836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 45366354 - 45366302
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtt 284  Q
    ||||||||  ||||||||||||| ||||||| |||||||||| ||| ||||||    
T  45366354 ttttaaaaggcaaccgaaccaaatcaaaccgtatgcttttttatcttgcggtt 45366302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 23 - 336
Target Start/End: Complemental strand, 8211546 - 8211221
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnng--aataattaaaa 120  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||    
T  8211546 tattattttggtattgtagtgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttttttaataattaaaa 8211447  T
Q  121 ttgcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttgg 220  Q
    ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8211446 ttgcttggtactagttggcaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttgg 8211347  T
Q  221 tttgg----------atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccga 310  Q
    |||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8211346 tttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccaa 8211247  T
Q  311 accaaatcgcaccgcgaacaccccta 336  Q
    |||||| |||||||||||||||||||    
T  8211246 accaaaccgcaccgcgaacaccccta 8211221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 337
Target Start/End: Complemental strand, 20494025 - 20493690
Alignment:
Q  15 tatccacctattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnng--aat 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||    
T  20494025 tatccagctattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttttgtaat 20493926  T
Q  113 aattaaaattgcttggtactagttggcaatattagagttaatgt-aannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgca 211  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||       |||||||||| |||||||||||||||||||||||||| ||||||||    
T  20493925 aattaaaattgtttggtattagttggcaatattagagttaatgttaatttttttatttatctcgagattaaccgcatcaactgaaccaatccaaaccgca 20493826  T
Q  212 ttggtttggtttgg----------atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgct 301  Q
    ||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20493825 ttggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgtttttttctctcgcggtttggatgattattatgct 20493726  T
Q  302 tgaaaccgaaccaaatcgcaccgcgaacacccctaa 337  Q
    ||||||||||||||| ||||||||||||||||||||    
T  20493725 tgaaaccgaaccaaaccgcaccgcgaacacccctaa 20493690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 23 - 336
Target Start/End: Original strand, 5155150 - 5155483
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||    
T  5155150 tattattttggtattgtagtgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcttttttttaataattaaaatt 5155249  T
Q  123 gcttggtactagttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattgg------- 215  Q
    |||||||||||||||| |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||||||||||           
T  5155250 gcttggtactagttggtaatattagagttaatgtaatttttttatttatctcgcgattaaccgcatcaactgaaccaatccaaaccgcattggtttggtt 5155349  T
Q  216 -------------tttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgctt 302  Q
                 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5155350 tggtttggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaatcgcatgcttttttctctcgcggtttggatgattattatgctt 5155449  T
Q  303 gaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||| ||||||| |||||||||||||||||||    
T  5155450 gaaaccaaaccaaaccgcaccgcgaacaccccta 5155483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 133 - 340
Target Start/End: Complemental strand, 33474590 - 33474386
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| |||||||||||||||||||||||||||||    
T  33474590 agttggcaatattagagttaatgtaattttt---tttatctcgcgataaaccgcacaaaccgaaccaatccaaaccgcattggtttggtttggatgactt 33474494  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    ||| ||||||||||||||||||| ||||||||||||||||| |||| | |||||||||||| || ||||  ||| |||||||||| ||||| ||||||||    
T  33474493 ttttaaaatcaaccgaaccaaactaaaccgcatgcttttttatctcacagtttggatgatttttttgctcaaaatcgaaccaaatagcaccacgaacacc 33474394  T
Q  333 cctaattt 340  Q
    ||||||||    
T  33474393 cctaattt 33474386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 133 - 336
Target Start/End: Original strand, 51252354 - 51252555
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        ||||||||| ||| |||||||  ||| ||||||||  || |||||||| |||||||||||||||||    
T  51252354 agttggcaatattagagttaatgtaatatctt--tttatctcgtgataaaccgcacaaaccgaaccaattcaagccgcattgatttggtttggatgactt 51252451  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| | |||||||  ||| ||||||||| |||||||||||||||    
T  51252452 tttaaaaatcaacccaaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcaccgcgaacacc 51252551  T
Q  333 ccta 336  Q
    ||||    
T  51252552 ccta 51252555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 133 - 333
Target Start/End: Original strand, 1161682 - 1161879
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactt 232  Q
    ||||||||||||||||||||||||||        |||||||| |||| |||||||  ||| ||||||||| || | ||||||||||||||||||||||||    
T  1161682 agttggcaatattagagttaatgtaatattt---tttatctcacgataaaccgcacaaaccgaaccaatcgaagctgcattggtttggtttggatgactt 1161778  T
Q  233 tttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacacc 332  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| | || ||||  ||||||||||||| |||| ||| ||||||    
T  1161779 tttaaaaatcaaccaaaccaaaccaaaccacatgcttttttatctcgcggttcggatgacttttctgctcaaaaccgaaccaaaccgcatcgcaaacacc 1161878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 212 - 337
Target Start/End: Original strand, 16529516 - 16529641
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| | |||||||  ||||||||    
T  16529516 ttggtttggtttgaatgactttttaaaaatcaaccgaaccaaaccaaacggcatgcttttttatctcgcagtttggatgacttttatgctcaaaaccgaa 16529615  T
Q  312 ccaaatcgcaccgcgaacacccctaa 337  Q
    ||||| ||||||||||||||||||||    
T  16529616 ccaaaccgcaccgcgaacacccctaa 16529641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 29707928 - 29708043
Alignment:
Q  23 tattattttggtactgtaatgttattttagataaataacttttattggtattgtaatgctattttggaacttcaagttcnnnnnnngaataattaaaatt 122  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  29707928 tattattttggtattgtaatgttattttatataaataacttttattggtattgtaatgctattttggaacttcaagttctttttttgaataattaaaatt 29708027  T
Q  123 gcttggtactagttgg 138  Q
    ||||||||||||||||    
T  29708028 gcttggtactagttgg 29708043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 212 - 335
Target Start/End: Complemental strand, 32954104 - 32953982
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| | ||||| |  ||||||||    
T  32954104 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttatctc-aggtttggatgacttttatgttcaaaaccgaa 32954006  T
Q  312 ccaaatcgcaccgcgaacacccct 335  Q
    ||||| |||||| |||||||||||    
T  32954005 ccaaaccgcaccacgaacacccct 32953982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 167 - 336
Target Start/End: Original strand, 42789579 - 42789743
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatg 266  Q
    ||||||||||||| |||  ||||||| ||||| ||| || |||||||| |||||||||||||||||||||||||||||| |     |||||||| |||||    
T  42789579 tttatctcgcgataaacaacatcaaccgaaccgatccaagccgcattgatttggtttggatgactttttaaaaatcaactg-----aaccaaactgcatg 42789673  T
Q  267 cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||||||| |||||||||||| |||| | |||||||| ||| || |||||| |||||||||||||||||||    
T  42789674 cttttttatctcgcggtttgaatgacttttatgcttaaaatcgtaccaaaccgcaccgcgaacaccccta 42789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 39256652 - 39256776
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| | |||| | || ||||  |||| |||    
T  39256652 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaactaaaccgcatgcttttttatctcgcagttcgaatgacttttgtgctcaaaacagaa 39256751  T
Q  312 ccaaatcgcaccgcgaacaccccta 336  Q
    ||||| |||||| ||||||||||||    
T  39256752 ccaaaccgcaccacgaacaccccta 39256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 167 - 325
Target Start/End: Complemental strand, 29389149 - 29388986
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattg-----gtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 261  Q
    ||||||| ||||| ||| |||| ||| ||||||||| |||||||||||     |||||||||||||||||||||||||||||| | ||||||| ||||||    
T  29389149 tttatcttgcgataaactgcataaaccgaaccaatccaaaccgcattgatttggtttggtttggatgactttttaaaaatcaatcaaaccaaatcaaacc 29389050  T
Q  262 gcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgc 325  Q
    |||||||||||| |||| |||||||||||| | || ||||  ||| ||||||||| ||||||||    
T  29389049 gcatgcttttttatctcacggtttggatgacttttttgctcaaaatcgaaccaaaccgcaccgc 29388986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 36203479 - 36203583
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||| | |||  ||  ||||||||||||||||||||||||||||    
T  36203479 ttttaaaagtcaaccgaaccaaatcaaaccgcatgcttttttatcttgcggtttggatgacttttaacctcaaaaccgaaccaaatcgcaccgcgaacac 36203578  T
Q  332 cccta 336  Q
    |||||    
T  36203579 cccta 36203583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 45691945 - 45691739
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggttt-----ggat 227  Q
    ||||| ||||||||||||||||||||        |||||||| |||| |||||||  ||| ||||||||| |||||||||| |||||||||     ||||    
T  45691945 agttgccaatattagagttaatgtaatattt---tttatctcacgataaaccgcacaaaccgaaccaatccaaaccgcattagtttggtttagtttggat 45691849  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatg-cttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcg 326  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| | |||||||||||||||   || ||||  |||| ||| |||| ||||||||     
T  45691848 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgttttttttatttcgcggtttggatgacatttttgctcaaaactgaatcaaaccgcaccgca 45691749  T
Q  327 aacaccccta 336  Q
    ||| ||||||    
T  45691748 aacgccccta 45691739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 133 - 323
Target Start/End: Complemental strand, 44918690 - 44918503
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggttt-----ggat 227  Q
    ||||||||||||||||||||||||||        ||||||||| ||| |||||||  ||| ||||||||| |||||| |||||||||||||     ||||    
T  44918690 agttggcaatattagagttaatgtaatattt---tttatctcgtgataaaccgcacaaaccgaaccaatccaaaccgtattggtttggtttcgtttggat 44918594  T
Q  228 gactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcacc 323  Q
    |||||||||||||||||||||||||     |||||||||||||||| ||| || |||||| ||| | |||||||  ||| ||||||||| ||||||    
T  44918593 gactttttaaaaatcaaccgaacca-----aaccgcatgcttttttatcttgcagtttgggtgacttttatgctcaaaatcgaaccaaaccgcacc 44918503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 33910797 - 33910922
Alignment:
Q  212 ttggtttggttt-ggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccga 310  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||  ||||||||| | |||||||  || | ||    
T  33910797 ttggtttggttttggatgaatttttaaaaatcaaccgaaccaaatcaaaccacatgcttttttatctcgcattttggatgacttttatgctcaaacctga 33910896  T
Q  311 accaaatcgcaccgcgaacaccccta 336  Q
    |||||| ||||| ||||| |||||||    
T  33910897 accaaaccgcactgcgaataccccta 33910922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 331
Target Start/End: Complemental strand, 11899072 - 11898958
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||||||||||||| |||||||||||||||||||||||||||     |||| |||||| || |||||||||||||| | || ||||  ||||||||    
T  11899072 ttggtttggtttggatgattttttaaaaatcaaccgaaccaaacca-----catgtttttttatcgcgcggtttggatgacttttttgctcaaaaccgaa 11898978  T
Q  312 ccaaatcgcaccgcgaacac 331  Q
     |||| ||||||||||||||    
T  11898977 tcaaaccgcaccgcgaacac 11898958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 333
Target Start/End: Original strand, 27507479 - 27507628
Alignment:
Q  184 cgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggt 283  Q
    |||| ||||||| |||||| ||||  |||||||||| |||||||    |||||||| |||||||||| ||||||||  |||| ||| ||| ||| |||||    
T  27507479 cgcaccaactgatccaatccaaacatcattggtttgatttggattttattttaaaagtcaaccgaactaaaccaaattgcatacttatttatcttgcggt 27507578  T
Q  284 ttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccc 333  Q
    | |||||| | |||| ||  ||||||||||||| ||||||||||||||||    
T  27507579 tcggatgacttttattctcaaaaccgaaccaaaccgcaccgcgaacaccc 27507628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 21685578 - 21685683
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| ||||| ||||||||||||||||||||| ||| | ||| ||||||  ||||| | |||  ||| |||||||||||||  ||||||| |||||    
T  21685578 ttttaaaagtcaactgaaccaaaccaaaccgcatgcatttgtatcttgcggttcagatgacttttagccttaaaaccgaaccaaactgcaccgcaaacac 21685677  T
Q  332 ccctaa 337  Q
    ||||||    
T  21685678 ccctaa 21685683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 35980423 - 35980528
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||| ||||| |||||||||| |||||||||||  || |||||| |||||| | |||  ||  ||||||||||||| |||||||| |||||    
T  35980423 ttttaaaagtcaatcgaacaaaaccaaaccacatgcttttttaccttgcggttcggatgacttttagcctcaaaaccgaaccaaaccgcaccgcaaacac 35980522  T
Q  332 ccctaa 337  Q
    ||||||    
T  35980523 ccctaa 35980528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 340
Target Start/End: Original strand, 40095457 - 40095565
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||||| ||||||| ||| |||||||||||  || ||| ||| |||||| |||| | | |||  ||  ||||||||||||| ||||||||||||||    
T  40095457 ttttaaaaataaaccgaaacaagccaaaccgcatatttatttatcttgcggttcggataacttttaacctcaaaaccgaaccaaaccgcaccgcgaacac 40095556  T
Q  332 ccctaattt 340  Q
    |||||||||    
T  40095557 ccctaattt 40095565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 12973606 - 12973501
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaa-ccgaaccaaatcgcaccgcgaaca 330  Q
    |||| |||||||||| ||||||||||||||||||  || ||| ||| |||||| |||||| | | | |||| ||| |||||||||| |||||||||||||    
T  12973606 ttttcaaaatcaaccaaaccaaaccaaaccgcatatttatttatcttgcggttcggatgactttca-gcttcaaaaccgaaccaaaccgcaccgcgaaca 12973508  T
Q  331 cccctaa 337  Q
    |||||||    
T  12973507 cccctaa 12973501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 16537822 - 16537932
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    |||||||||||| || |||| | |||| |||||||||||||| ||||    |||||||| | |||| ||||||| ||||||||||| |||||| ||| ||    
T  16537822 aaccgcatcaacagatccaacccaaactgcattggtttggttcggattttattttaaaagtgaaccaaaccaaatcaaaccgcatgtttttttatcttgc 16537921  T
Q  281 ggtttggatga 291  Q
    ||||| |||||    
T  16537922 ggtttagatga 16537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 32910405 - 32910506
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||| ||| |||||||||||||||||||| ||||| |||||| ||| || |||||||||| | |||| ||  ||||||||||||  | |||||| |||||    
T  32910405 tttttaaagtcaaccgaaccaaaccaaactgcatgtttttttatcttgcagtttggatgacttttatcctcaaaaccgaaccaacacacaccgcaaacac 32910504  T
Q  332 cc 333  Q
    ||    
T  32910505 cc 32910506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 34914231 - 34914121
Alignment:
Q  181 aaccgcatcaactgaaccaatctaaaccgcattggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgc 280  Q
    ||||||| |||| || |||||| ||||| ||||||||||||| | ||    |||||||| |||||| || |||||||||| |||| ||||||| | ||||    
T  34914231 aaccgcaacaaccgatccaatccaaaccacattggtttggttcgaattttattttaaaagtcaaccaaagcaaaccaaactgcatacttttttatttcgc 34914132  T
Q  281 ggtttggatga 291  Q
     ||||||||||    
T  34914131 agtttggatga 34914121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 24910987 - 24911076
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggttt 223  Q
    ||||||||||||||||||||||||||        |||||||||| || |||||||  ||| ||||||||| |||| |||||||||||||||    
T  24910987 agttggcaatattagagttaatgtaatattttt-tttatctcgcaataaaccgcacaaaccgaaccaatccaaactgcattggtttggttt 24911076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 336
Target Start/End: Original strand, 8165587 - 8165691
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||| ||| ||||||||||| ||||||||||||||||| ||| ||  |||||| |||||||| |||   |  |||| |||| ||| |||||||| |||||    
T  8165587 tttttaaagtcaaccgaaccgaaccaaaccgcatgcttctttatcctgcggttcggatgatttttaccttcaaaactgaactaaaccgcaccgcaaacac 8165686  T
Q  332 cccta 336  Q
    |||||    
T  8165687 cccta 8165691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 33769972 - 33769936
Alignment:
Q  189 caactgaaccaatctaaaccgcattggtttggtttgg 225  Q
    |||||||||||||| ||||||||||||||||||||||    
T  33769972 caactgaaccaatccaaaccgcattggtttggtttgg 33769936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 25560035 - 25560137
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||||||   ||||||||||| ||||||| |||  ||||| | |||| | |||  ||  ||| ||||||||| ||||||||||||||    
T  25560035 ttttaaaagtcaaccgaacc---ccaaaccgcatacttttttatcttacggttcgaatgacttttaacctcaaaatcgaaccaaaacgcaccgcgaacac 25560131  T
Q  332 ccctaa 337  Q
    ||||||    
T  25560132 ccctaa 25560137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 273
Target Start/End: Complemental strand, 50471311 - 50471232
Alignment:
Q  199 aatctaaaccgcattggtttggtttggat--gacttt---ttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    ||||||||||||||||||||||||||| |  || |||   ||||||  |||| ||||||||||||||||||| |||||||    
T  50471311 aatctaaaccgcattggtttggtttggtttggattttattttaaaatgcaactgaaccaaaccaaaccgcatactttttt 50471232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 336
Target Start/End: Complemental strand, 6248112 - 6248019
Alignment:
Q  243 aaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||| |||||||||||||||||| ||| ||| ||| ||||||||||||| | |||  ||  ||| | || |||| ||||| |||||||||||||    
T  6248112 aaccaaaccaaaccaaaccgcatacttatttttcttgcggtttggatgacttttagtctcaaaatcaaatcaaaccgcactgcgaacaccccta 6248019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 17651798 - 17651757
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  17651798 ttttaaaagtcaaccgaacaaaatcaaaccgcatgctttttt 17651757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 33910742 - 33910794
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttg 219  Q
    ||||||||  ||| |||||||| ||| ||||||||| ||||||||||||||||    
T  33910742 tttatctcatgataaaccgcataaaccgaaccaatcaaaaccgcattggtttg 33910794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 52828868 - 52828769
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacac 331  Q
    |||||||| |||||||| ||||||||||| ||||||||| || ||| ||||||  |||||   |||  ||| ||||||||||||| |  |||||||||||    
T  52828868 ttttaaaagtcaaccga-ccaaaccaaacagcatgctttgttatcttgcggttcagatgacctttaaccttaaaaccgaaccaaaccaaaccgcgaacac 52828770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 69556 - 69680
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | |||||||  ||| ||||    
T  69556 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatctcgcggtttggatgacttttatgctcaaaatcgaa 69655  T
Q  312 ccaaatcgcaccgcgaacaccccta 336  Q
    ||||| |||||||||||||||||||    
T  69656 ccaaaccgcaccgcgaacaccccta 69680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 336
Target Start/End: Complemental strand, 128790 - 128579
Alignment:
Q  133 agttggcaatattagagttaatgtaannnnnnnatttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg------- 225  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||||  ||| ||||||||| || |||||||| ||||||||||           
T  128790 agttggcaatattagagttaatgtaatatttt--tttatctcgcgataaaccgcacaaaccgaaccaatccaagccgcattgatttggtttggttcggtt 128693  T
Q  226 ---atgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcac 322  Q
       |||||||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||| | |||||||  ||| ||||||||| |||||    
T  128692 tggatgactttttaaaaatcaacagaaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttatgctcaaaatcgaaccaaaccgcac 128593  T
Q  323 cgcgaacaccccta 336  Q
    ||| ||||||||||    
T  128592 cgcaaacaccccta 128579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 336
Target Start/End: Complemental strand, 106096 - 105972
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| | || ||||  ||| ||||    
T  106096 ttggttcggtttggatgacattttaaaaatcaaccgaaccaaaccaaaccacatgcttttttatcttgcggtttggatgacttttttgctcaaaatcgaa 105997  T
Q  312 ccaaatcgcaccgcgaacaccccta 336  Q
    ||||| |||||||||||||||||||    
T  105996 ccaaaccgcaccgcgaacaccccta 105972  T

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Target: scaffold0029 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 336
Target Start/End: Original strand, 40541 - 40725
Alignment:
Q  167 tttatctcgcgattaaccgcatcaactgaaccaatctaaaccgcattggtttggtttgg-----atgactttttaaaaatcaaccgaacc---------- 251  Q
    ||||||||||||| |||||||   |  ||||||||| ||||||||||||||||||||||     ||||||||||||||||||||||||||              
T  40541 tttatctcgcgataaaccgcacatatcgaaccaatccaaaccgcattggtttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaacc 40640  T
Q  252 aaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    |||||||||||||||  ||||| |||| |||||||||||| |||||||||  ||||||||||||| |||||||||||||||||||    
T  40641 aaaccaaaccgcatgagtttttatctcacggtttggatgactattatgctcaaaaccgaaccaaaccgcaccgcgaacaccccta 40725  T

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Target: scaffold0204 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 335
Target Start/End: Complemental strand, 25929 - 25807
Alignment:
Q  212 ttggtttggtttggatgactttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaa 311  Q
    ||||||||||||||||    |||||||| |||||||||||||||||||| ||||| |||||| |||  ||||| |||||| | |||  ||| ||||||||    
T  25929 ttggtttggtttggattttattttaaaagtcaaccgaaccaaaccaaactgcatg-ttttttatcttacggttcggatgacttttaaccttaaaaccgaa 25831  T
Q  312 ccaaatcgcaccgcgaacacccct 335  Q
    |||||  ||||||| || ||||||    
T  25830 ccaaactgcaccgcaaatacccct 25807  T

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Target: scaffold0204; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 14560 - 14465
Alignment:
Q  241 tcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaatcgcaccgcgaacaccccta 336  Q
    ||||| ||||||||||||| ||||||||||||| ||| |||||| |||||| | |||   |  |||| |||||||| |||||||| ||||| ||||    
T  14560 tcaactgaaccaaaccaaatcgcatgcttttttatcttgcggttcggatgacttttaacttcaaaactgaaccaaaccgcaccgcaaacactccta 14465  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 62446 - 62405
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgctttttt 273  Q
    |||||||| |||||||||||||| |||||||||| |||||||    
T  62446 ttttaaaagtcaaccgaaccaaatcaaaccgcatactttttt 62405  T

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Target: scaffold0688 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 1204 - 1121
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaa 316  Q
    |||||| |||||||||||||| |||||||| |||| |||||| ||| |||||| |||||| | |||  ||  |||||||||||||    
T  1204 ttttaagaatcaaccgaaccacaccaaaccacatg-ttttttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaa 1121  T

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Target: scaffold0688; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 7773 - 7690
Alignment:
Q  232 ttttaaaaatcaaccgaaccaaaccaaaccgcatgcttttttctctcgcggtttggatgattattatgcttgaaaccgaaccaaa 316  Q
    |||||| |||||||||||||| |||||||| |||| |||||| ||| |||||| |||||| | |||  ||  |||||||||||||    
T  7773 ttttaagaatcaaccgaaccacaccaaaccacatg-ttttttatcttgcggttcggatgacttttagcctcaaaaccgaaccaaa 7690  T

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